Cp4.1LG06g02160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG06g02160
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionU3 small nucleolar RNA-associated protein 4 homolog isoform X1
LocationCp4.1LG06: 1100873 .. 1106948 (-)
RNA-Seq ExpressionCp4.1LG06g02160
SyntenyCp4.1LG06g02160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGCCTACTTCCTCTTCCTCTTTCCCTTCCCATTACCCTATTTTTTTGCTTCCCTTCTTCTAAACCTAGTTGTTTTCGATGCCCCATTTCCTCTGCCAAGTTCTTGCTCGGTCCGTCCCGACACCAATCAACTAACGTTCCTTCAGTTTCTTTTGTTTGTTGGAAAAAATGATTGAATTTTATCGGAATTCTTCAATTGAATGGAAGCCGTCTCCTGTAGTAGCGTTAGCCTCCAGTGCCGATGGCTCTCAGGTTGCAGCTGCCCGAGAAGATGGCTCGCTTGAGATTTGGCTGGTGTCTCCTGGTTCCGTAGGGTGGCACTGTCAATTGGTACAGTCGACTATCATACATTCAACATTTAGTCCGACTAATTGATTCTGAAGTTTGATCTTATTGCTTTCTTTTGAAACAGACGATTAATGGAGACCCTACTTCTAGGGTTTCATCACTGGTCTGGTGCCGTGCCGGTTTAAAAGATAGGCCTTCTGGTCGCTTATTTTCGTCCAGCATTGATGGTTCTATATCGGAGTGGGATTTGTTTGGTTTAACGCAGAAGGTATACCTTCTTGCTTCTCTCTAAAAACTGCAGTTCATCTGCTTTATTCTTCCGGACTTACGTTAACGTGTTATTGTGGCATTTCTGGTATGTAAAGCACGCTTGTGCAATATAGTATTATAGTGGCGTTTATTTACTCAATTTCTTCTTGAAATGCCATCTGAAACACAATTAGTTTAGGTTTGTTACCGACATTGAACTTTACTAAAGATATTGAAGTATTGGTAGGAAAATTTGTAACCAAAGTGGTTAAAGTTGCGGTTAGTCAATATCCCAACGTGGCTTTTGGTCTCTAGGAGTACCATATTTATTTTGAGAAGCAACCCTTCGCTTTGTTGTTATCCTAAGAAGCTTGTTTTGATTGATGGTTATTGTTTTCAGTCTGTTTTAGAATCAATTGGCCTCTCCATCTGGCAAATTGCTGCCGCACCCTGTAATAGTCGTGAAGTTCACAGGGAGGTTAAACCCAAGGAAATTGAAAATGCGCATGTAACTGACAACGAGAGTGATTGCCAAGATTGCAGTGAGAGTGAAGATGATTCTAATTCATCTGAACTTCATGTCCAAGCTAGCGATGAGGATCACTCTCTAGCAATTGCTTGTGATGATGGGTGTGTGCGGATTTACAATATATGTGATGCGGAAGAGTTAATTTACAAAAGATCGTTGCCTAGGGTCAGTGGTGAGAATCTATTCCCAGATTCATGTCATTTTTTATTTTCCATTAGCTGGATAGTTAAACCCTCTTTGTCTTTCTGCTATTCCCAGGTCGTGTTTTAAGTGTAACATGGAGTAATGATGCAGAACGGATATTTTCAGGAAGCAGTGATGGGTATGTACACATACCACCTGTTGTTACTTGCAATGAAAATTTATATAATACATGATCCTTCTCCTATTTACTTCGTTAAGTTATGGTTACCCCATGTTTGTTTGTTTTCCCTTTTCCATTTACTACTTTCAGGTTTATTCGTTGCTGGAATGCTAGTCTCGGGCATGAGATTTATAGAATTACTGCTGGACTTGGAGGTTTGGGCAGTGGATCAGAACTTTGTGTATGGTCGTTACTTTTCCTTAGGTAAAGAATTACATACTTGTGATCGCATAGTTGTTAGGTGATATCTTCCACCATTCTGAAGGCATTTGTTATTTGGAATTTCTTGTTAACTGCAGGTGTGGTACCCTTGTTAGTGCAGATAGTACTGGTAGTGTGCAGTTTTGGGATAGTAATCATGGAACTCTTTTGCAAGCACACACCTTACACAAGGGTGATGTGAATGCACTTGCAGCTACACCTAATCATAATAGAGTATATTCTGCTGGCTCTGATGGTCAGGTACTGATTTTGGTCATTCTGTATGGTTTCATTAAGTGCTTATGTACACTTCTCGCACGTTGCCCAATCATGTTAGCCCTCGCTAACATCTTGATTCTTCTACACCACTCAGCAATCTTGTTTTTATATTCAAGGATTCTTATTGTATCATTATCCATGTATTTTTGGCATATGCCCATTTGATTAGTTACTTTTCTGATTCTTTAAATAATCACAGATTTCTTTAGTCTTGAGTTATGAAAGTATAGAACAAAAGGAGTGAAGGATTGATGTCTCAAGCTATTGTTTTAGCCTGTAGCCATCTATTGCTATTCTGACTGGGAGATGAGGGGCAAGCAGACCGTGTGCTTAGAGTTGAAATTTCTTTAACAATCTTAGAGGTTGATCATGTTGACAGTTCACTGATTTTATTACTTTTATATATTGTGGAAGGCAGTAGGTTGCAGTAGCTGTGTTTTCTTTTGGCGAGTAGAAATCATTGAAGATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGAACAAAGAAGGGGCTAGTTTGTAATTTTCACTGTCCATATTGCTTATCAGTTGATAATTTGTCCTAATTTGTTTTCCTTATTGGAGCTTGTTAAATTAATTCATTCTTGTTGAGAAAATTCCTTTTCAATTTTATCAGTCTGTCACATTGTCCCAAACAATGAATGGAATCACTGGTGACCTGAATTACAAGGCTTAGTTGCTGAGGAATTAAGTTAATCTTTTTATGGTCTTTCTATGTGGTAAAACAAATTCCATAACACTTGTGTCTTGTGAATATATTGTCTTTGTAGGTCATTCTCTACAGGCTCTCTAACGAGAATGTTGTATCTAGTGAAGACAAGTATTCTTCTGAAATTATGAAGAAATGGATTTATGTTGGTCATGTAAGGGCTCATACTCATGATATCAGGGCTTTGACTGTTGCAGTACCGATTTGTCGAGAAGGTATTTTTTTTTAGTTTTTGTCCTTGTTAGTGTTATTTTTGTCAATACCAAAATTGGGCATTTTTCACCTGATGCATCTGCGGTGAACTCTAGGCTTGTTTGTTGGTGAAGCTTTATTTCATAATCAAGATTGAATACGATCCCTTTTGTTTCCTAAACTTTTTAGATTTTGTTTTTCTTAGCAGCAGAGGCGTCCCAAGATGTTGAGGTGAAAAGAATTCGTCATAAGAGGAAGCCTAATGACTTTAGCTATCATAAGTGGGCCCATCTGGGAGTTCCAATGTTAATGTCAGGCGGTGATGATACAAAGCTGTTTGCATACTCTGCTCAGGAATTTACCAAATTTTCTCCCCATGATATATGTCCTGCACCGCAAAGGGTACCTATGCAACTTGTACTCAATACAGTTTTCAACCAGGCACCATTATTACTTGTTCAGGCTGCTCACTCTTTGGACATCCTGTGTGTTCGCCCAAAATGTGGTTCCTTTGGAGATAAGACTTGTGGCCCTTCTAAGGGACTTGCAAAGGCAGATTTATTGGTTCGAGTTAAGAGCAAGGCATCTCGAAAGATTATCTGCAGTACTATTTCCAACTCTGGAAAGCTGTTTGCATTTTCTGATCACACCAAACCCAACTTATATGAATTGAAGAAATCTGGAGGAAGCAAATGTTCGTGGACTGTTAATAGAAGGAAACTTCCAAATACGCTACCATTTGCCCATTCTATGGTCTTCAGTTTTGATTCTTCTCGATTAATCATAGCAGGGCATGATAAAAGGATATATGTAAGTTGCCTTACTAGATCAATCTATGATACAGTACCTGATTTGTATTGATATATTTTTCTTATTACCTCTAATTTCATGAAGCACGTTTGACATTTTGTGGTATGAATTTATTGGATTATTTTGTAAAATTATTTCAATAAAATATGAGGGTATCATTTTATATCTGTTGCTGTTGAGAGGGAATTGTTTTAGCTGATTGATATGTTGGACTCTTTAATTGCATTCTATTGATTTCTGTTTTCCTGGTGAACAAATAAGCTAATATTAAAGACCTTTGATGCTTCTGTGGTGGATTGGTTGGTCAATTTATTGAGTGCTATTTAATTTAATTTCTTAACCCTTTCCCGTGGGAACAGGTTGTGGATGTGAGTAGTTTGGAAGTCTTACATAGTTTTACGCCTTTCCGGGAGCAGCAGGATGATATATTGCCACCCGCTGAACCTCCTATAACAAAAATATTTACAAGTTCAGATGGGCAGTGGTTAGCTGCAGTCAACTGCTTTGGAGATATATACGTATTCAATATGGAGATTTTGAGGTTTGTTATCTTGTTGTGCTGATGTATTGTTTCATCAGCAGCTTATCATTGCCCTCCCTTCCTATCTGCATTCTCATGGTTTCCAAGAAAGTTATGCACGGACTATTTTTCTCTTGTAACAGGCAACACTGGTTCATTTCGAGACTAGATGGTGCCTCAATTACAGCAGGAGGCTTTCCTCAATGGAACAACAATGTGCTTGTAGTCACTACTTCTTCCAATCAGATTTATGCCTTTGATATTGAGGCCAAGCAATTAGGAGACTGGTCAATGCGGCATACACAAGCTCTCCCGAAGAGGTTTCAAGAATTTCCTGGGGAGGTTATTGGTCTCTCTTTCCCACCATCTACCACTTCGTTGCCTGTTATTGTGTATAGTTCCAGGTATTGCTCTATATCACTGTTTTATGCGCTGAAGTGAAGTATATTTGAACAAATTTTCCCTTGTAAAAATGAAATTTGGTTTCTTGAATTTGATAGACTTGCACCGTTGTGTGGTTGATTACTACGTTGTTGTGTGCTAAGCTTTTAGTTCTTTTATATCCTGTCTACTTTTCTGGAAGAAGAGTTGTACTTAGATATATGCTTATTCTTGTGACCAAGTATTTCATGATATTACATTAATGACAAAGCCATTGTGCCATTATCCTTGCGGGTCTTGAAAATATATTTCACTCTTTTGCATGTTCAGATTATTTGTTGATTTTGATTGAATCAGTGATCTATATTCATTGTTAGGAAATCTTGGCGCTATACTCATGTTTATCTCTGTTCGATCTTGCATACCTCAGTCTATACATTTTGACGTTTGACTGAAAAAATATCTTTTATTTTGTAGGGCAATGTGCTTGATTGACTTTAGAATGTCGGTGGACCAAAATGATGAATATGTCATGATAAGTGGACAAGATTCAACGGTGAAGAATTTATGGGGTACTCCAATAAATGGAAAACTGAAACGAAAGCTAAGAGACTGCCAAACAGAGGGTAGACCACATGGTAGAAAGAATTTTGAAAATTTTCCTTTTAGAGATCCTGTTTTACTTATTGGGCACCTCTCCAAAACTTCACTCTTGATTATAGAAAAACCATGGTTAGAAGTGGTTAACACTTTCGATGCCCCACCTGTGCACAGACATATATATGGGACTTAAGTCCTCATATTAAAGGCGTTTTCTAGGATATACTTGAATGTTGGAATCCACCATTCTTTCTATGACATCTCTCGATTCCTACAATTTTGTTCTTGGGAGGGGGGTTATCTGAGCGTCTAAAGCAGAGTGTTGTATTGTATCATTGATTATTTTTTTTGAACTTAAAAGTAGTTCCTTTAGTCTTAAGAAGTTCTTGCACACCGCCTTTCCCTCCCCACCCCCATCGAAAAGCTAAAAAATACCCCCAACAAAACATTGTTCTTTTACTTTGTTGTTAGTATTTGCAGTGCAAATGCAGGGTATTCTTATTTACCTACGGTTATATAGTTTTGAAGTATACTCTGCTAATTCAGAATGAACAACAGTTGGGAGTATAATTAATATACTTTCCAGGTTATCTTTTATAATATCCTACTGTGGAGTTTCGGTGGTAAATTGATCTGGCTTGCAGGCTTAAGCAGG

mRNA sequence

TTGCCTACTTCCTCTTCCTCTTTCCCTTCCCATTACCCTATTTTTTTGCTTCCCTTCTTCTAAACCTAGTTGTTTTCGATGCCCCATTTCCTCTGCCAAGTTCTTGCTCGGTCCGTCCCGACACCAATCAACTAACGTTCCTTCAGTTTCTTTTGTTTGTTGGAAAAAATGATTGAATTTTATCGGAATTCTTCAATTGAATGGAAGCCGTCTCCTGTAGTAGCGTTAGCCTCCAGTGCCGATGGCTCTCAGGTTGCAGCTGCCCGAGAAGATGGCTCGCTTGAGATTTGGCTGGTGTCTCCTGGTTCCGTAGGGTGGCACTGTCAATTGACGATTAATGGAGACCCTACTTCTAGGGTTTCATCACTGGTCTGGTGCCGTGCCGGTTTAAAAGATAGGCCTTCTGGTCGCTTATTTTCGTCCAGCATTGATGGTTCTATATCGGAGTGGGATTTGTTTGGTTTAACGCAGAAGTCTGTTTTAGAATCAATTGGCCTCTCCATCTGGCAAATTGCTGCCGCACCCTGTAATAGTCGTGAAGTTCACAGGGAGGTTAAACCCAAGGAAATTGAAAATGCGCATGTAACTGACAACGAGAGTGATTGCCAAGATTGCAGTGAGAGTGAAGATGATTCTAATTCATCTGAACTTCATGTCCAAGCTAGCGATGAGGATCACTCTCTAGCAATTGCTTGTGATGATGGGTGTGTGCGGATTTACAATATATGTGATGCGGAAGAGTTAATTTACAAAAGATCGTTGCCTAGGGTCAGTGGTCGTGTTTTAAGTGTAACATGGAGTAATGATGCAGAACGGATATTTTCAGGAAGCAGTGATGGGTTTATTCGTTGCTGGAATGCTAGTCTCGGGCATGAGATTTATAGAATTACTGCTGGACTTGGAGGTTTGGGCAGTGGATCAGAACTTTGTGTATGGTCGTTACTTTTCCTTAGGTGTGGTACCCTTGTTAGTGCAGATAGTACTGGTAGTGTGCAGTTTTGGGATAGTAATCATGGAACTCTTTTGCAAGCACACACCTTACACAAGGGTGATGTGAATGCACTTGCAGCTACACCTAATCATAATAGAGTATATTCTGCTGGCTCTGATGGTCAGGTCATTCTCTACAGGCTCTCTAACGAGAATGTTGTATCTAGTGAAGACAAGTATTCTTCTGAAATTATGAAGAAATGGATTTATGTTGGTCATGTAAGGGCTCATACTCATGATATCAGGGCTTTGACTGTTGCAGTACCGATTTGTCGAGAAGCAGCAGAGGCGTCCCAAGATGTTGAGGTGAAAAGAATTCGTCATAAGAGGAAGCCTAATGACTTTAGCTATCATAAGTGGGCCCATCTGGGAGTTCCAATGTTAATGTCAGGCGGTGATGATACAAAGCTGTTTGCATACTCTGCTCAGGAATTTACCAAATTTTCTCCCCATGATATATGTCCTGCACCGCAAAGGGTACCTATGCAACTTGTACTCAATACAGTTTTCAACCAGGCACCATTATTACTTGTTCAGGCTGCTCACTCTTTGGACATCCTGTGTGTTCGCCCAAAATGTGGTTCCTTTGGAGATAAGACTTGTGGCCCTTCTAAGGGACTTGCAAAGGCAGATTTATTGGTTCGAGTTAAGAGCAAGGCATCTCGAAAGATTATCTGCAGTACTATTTCCAACTCTGGAAAGCTGTTTGCATTTTCTGATCACACCAAACCCAACTTATATGAATTGAAGAAATCTGGAGGAAGCAAATGTTCGTGGACTGTTAATAGAAGGAAACTTCCAAATACGCTACCATTTGCCCATTCTATGGTCTTCAGTTTTGATTCTTCTCGATTAATCATAGCAGGGCATGATAAAAGGATATATGTTGTGGATGTGAGTAGTTTGGAAGTCTTACATAGTTTTACGCCTTTCCGGGAGCAGCAGGATGATATATTGCCACCCGCTGAACCTCCTATAACAAAAATATTTACAAGTTCAGATGGGCAGTGGTTAGCTGCAGTCAACTGCTTTGGAGATATATACGTATTCAATATGGAGATTTTGAGGCAACACTGGTTCATTTCGAGACTAGATGGTGCCTCAATTACAGCAGGAGGCTTTCCTCAATGGAACAACAATGTGCTTGTAGTCACTACTTCTTCCAATCAGATTTATGCCTTTGATATTGAGGCCAAGCAATTAGGAGACTGGTCAATGCGGCATACACAAGCTCTCCCGAAGAGGTTTCAAGAATTTCCTGGGGAGGTTATTGGTCTCTCTTTCCCACCATCTACCACTTCGTTGCCTGTTATTGTGTATAGTTCCAGGGCAATGTGCTTGATTGACTTTAGAATGTCGGTGGACCAAAATGATGAATATGTCATGATAAGTGGACAAGATTCAACGGTGAAGAATTTATGGGGTACTCCAATAAATGGAAAACTGAAACGAAAGCTAAGAGACTGCCAAACAGAGGGTAGACCACATGGTAGAAAGAATTTTGAAAATTTTCCTTTTAGAGATCCTGTTTTACTTATTGGGCACCTCTCCAAAACTTCACTCTTGATTATAGAAAAACCATGGTTAGAAGTGGTTAACACTTTCGATGCCCCACCTGTGCACAGACATATATATGGGACTTAAGTCCTCATATTAAAGGCGTTTTCTAGGATATACTTGAATGTTGGAATCCACCATTCTTTCTATGACATCTCTCGATTCCTACAATTTTGTTCTTGGGAGGGGGGTTATCTGAGCGTCTAAAGCAGAGTGTTGTATTGTATCATTGATTATTTTTTTTGAACTTAAAAGTAGTTCCTTTAGTCTTAAGAAGTTCTTGCACACCGCCTTTCCCTCCCCACCCCCATCGAAAAGCTAAAAAATACCCCCAACAAAACATTGTTCTTTTACTTTGTTGTTAGTATTTGCAGTGCAAATGCAGGGTATTCTTATTTACCTACGGTTATATAGTTTTGAAGTATACTCTGCTAATTCAGAATGAACAACAGTTGGGAGTATAATTAATATACTTTCCAGGTTATCTTTTATAATATCCTACTGTGGAGTTTCGGTGGTAAATTGATCTGGCTTGCAGGCTTAAGCAGG

Coding sequence (CDS)

ATGATTGAATTTTATCGGAATTCTTCAATTGAATGGAAGCCGTCTCCTGTAGTAGCGTTAGCCTCCAGTGCCGATGGCTCTCAGGTTGCAGCTGCCCGAGAAGATGGCTCGCTTGAGATTTGGCTGGTGTCTCCTGGTTCCGTAGGGTGGCACTGTCAATTGACGATTAATGGAGACCCTACTTCTAGGGTTTCATCACTGGTCTGGTGCCGTGCCGGTTTAAAAGATAGGCCTTCTGGTCGCTTATTTTCGTCCAGCATTGATGGTTCTATATCGGAGTGGGATTTGTTTGGTTTAACGCAGAAGTCTGTTTTAGAATCAATTGGCCTCTCCATCTGGCAAATTGCTGCCGCACCCTGTAATAGTCGTGAAGTTCACAGGGAGGTTAAACCCAAGGAAATTGAAAATGCGCATGTAACTGACAACGAGAGTGATTGCCAAGATTGCAGTGAGAGTGAAGATGATTCTAATTCATCTGAACTTCATGTCCAAGCTAGCGATGAGGATCACTCTCTAGCAATTGCTTGTGATGATGGGTGTGTGCGGATTTACAATATATGTGATGCGGAAGAGTTAATTTACAAAAGATCGTTGCCTAGGGTCAGTGGTCGTGTTTTAAGTGTAACATGGAGTAATGATGCAGAACGGATATTTTCAGGAAGCAGTGATGGGTTTATTCGTTGCTGGAATGCTAGTCTCGGGCATGAGATTTATAGAATTACTGCTGGACTTGGAGGTTTGGGCAGTGGATCAGAACTTTGTGTATGGTCGTTACTTTTCCTTAGGTGTGGTACCCTTGTTAGTGCAGATAGTACTGGTAGTGTGCAGTTTTGGGATAGTAATCATGGAACTCTTTTGCAAGCACACACCTTACACAAGGGTGATGTGAATGCACTTGCAGCTACACCTAATCATAATAGAGTATATTCTGCTGGCTCTGATGGTCAGGTCATTCTCTACAGGCTCTCTAACGAGAATGTTGTATCTAGTGAAGACAAGTATTCTTCTGAAATTATGAAGAAATGGATTTATGTTGGTCATGTAAGGGCTCATACTCATGATATCAGGGCTTTGACTGTTGCAGTACCGATTTGTCGAGAAGCAGCAGAGGCGTCCCAAGATGTTGAGGTGAAAAGAATTCGTCATAAGAGGAAGCCTAATGACTTTAGCTATCATAAGTGGGCCCATCTGGGAGTTCCAATGTTAATGTCAGGCGGTGATGATACAAAGCTGTTTGCATACTCTGCTCAGGAATTTACCAAATTTTCTCCCCATGATATATGTCCTGCACCGCAAAGGGTACCTATGCAACTTGTACTCAATACAGTTTTCAACCAGGCACCATTATTACTTGTTCAGGCTGCTCACTCTTTGGACATCCTGTGTGTTCGCCCAAAATGTGGTTCCTTTGGAGATAAGACTTGTGGCCCTTCTAAGGGACTTGCAAAGGCAGATTTATTGGTTCGAGTTAAGAGCAAGGCATCTCGAAAGATTATCTGCAGTACTATTTCCAACTCTGGAAAGCTGTTTGCATTTTCTGATCACACCAAACCCAACTTATATGAATTGAAGAAATCTGGAGGAAGCAAATGTTCGTGGACTGTTAATAGAAGGAAACTTCCAAATACGCTACCATTTGCCCATTCTATGGTCTTCAGTTTTGATTCTTCTCGATTAATCATAGCAGGGCATGATAAAAGGATATATGTTGTGGATGTGAGTAGTTTGGAAGTCTTACATAGTTTTACGCCTTTCCGGGAGCAGCAGGATGATATATTGCCACCCGCTGAACCTCCTATAACAAAAATATTTACAAGTTCAGATGGGCAGTGGTTAGCTGCAGTCAACTGCTTTGGAGATATATACGTATTCAATATGGAGATTTTGAGGCAACACTGGTTCATTTCGAGACTAGATGGTGCCTCAATTACAGCAGGAGGCTTTCCTCAATGGAACAACAATGTGCTTGTAGTCACTACTTCTTCCAATCAGATTTATGCCTTTGATATTGAGGCCAAGCAATTAGGAGACTGGTCAATGCGGCATACACAAGCTCTCCCGAAGAGGTTTCAAGAATTTCCTGGGGAGGTTATTGGTCTCTCTTTCCCACCATCTACCACTTCGTTGCCTGTTATTGTGTATAGTTCCAGGGCAATGTGCTTGATTGACTTTAGAATGTCGGTGGACCAAAATGATGAATATGTCATGATAAGTGGACAAGATTCAACGGTGAAGAATTTATGGGGTACTCCAATAAATGGAAAACTGAAACGAAAGCTAAGAGACTGCCAAACAGAGGGTAGACCACATGGTAGAAAGAATTTTGAAAATTTTCCTTTTAGAGATCCTGTTTTACTTATTGGGCACCTCTCCAAAACTTCACTCTTGATTATAGAAAAACCATGGTTAGAAGTGGTTAACACTTTCGATGCCCCACCTGTGCACAGACATATATATGGGACTTAA

Protein sequence

MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDPTSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPCNSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGCVRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRITAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALAATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTVAVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFTKFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKGLAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKLPNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPITKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTTSSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMCLIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPFRDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT
Homology
[Close]
BLAST of Cp4.1LG06g02160 vs. ExPASy Swiss-Prot
Match: Q8RXU6 (WD repeat-containing protein PCN OS=Arabidopsis thaliana OX=3702 GN=PCN PE=2 SV=1)

HSP 1 Score: 1033.9 bits (2672), Expect = 1.0e-300
Identity = 525/830 (63.25%), Postives = 633/830 (76.27%), Query Frame = 0 

Query: 5   YRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDPTSRV 64
           YR SS++WKPSPVVALA+S+D SQVAAAREDGSLEIWLVSPG+VGWHCQLTI+GDP SR+
Sbjct: 4   YRCSSVDWKPSPVVALANSSDDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRI 63

Query: 65  SSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPCNSRE 124
           SSL WC +     PSGRLFSSSIDGSISEWDLF L QK VLESIG+SIWQ+A AP +   
Sbjct: 64  SSLAWCCSPSIGLPSGRLFSSSIDGSISEWDLFDLKQKIVLESIGISIWQMALAPISGFS 123

Query: 125 VHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDE-DHSLAIACDDGCVRI 184
              E     I+N ++++  +D ++    ED S+S E H ++ +E D  LA ACDDGCVR+
Sbjct: 124 SDVE----GIKNGYLSEKSNDEEEIGSEEDGSDSDEFHEKSEEEIDRILAAACDDGCVRL 183

Query: 185 YNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRITAG 244
           Y I + E+L Y RSLPRVSGR LSVTWS DA+RIFSGSSDG IRCW+A+  HE+YRITAG
Sbjct: 184 YRISNLEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAG 243

Query: 245 LGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALAATP 304
           LGGLGS SE+CVWSLL LRC  LVS DSTG+VQFWDS HGTLL+AH+ HKGDVN LAA P
Sbjct: 244 LGGLGSSSEICVWSLLSLRCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAP 303

Query: 305 NHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTVAVP 364
           +HNRV+SAG+DGQVILY+LS     S + K SS   +KW Y+G+V+AHTHDIRALTVAVP
Sbjct: 304 SHNRVFSAGADGQVILYKLSGSTNGSQDLKPSSS--QKWDYIGYVKAHTHDIRALTVAVP 363

Query: 365 ICRE---AAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 424
           I RE     +   D   ++ R K KP DF+YHKWAHLGVPML+S GDD KLFAYS QEFT
Sbjct: 364 ISREDPFPDDILPDKASRKHRKKGKPVDFTYHKWAHLGVPMLISAGDDAKLFAYSIQEFT 423

Query: 425 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 484
           KFSPHDICPAPQR+PMQ+V N++FN+  LLLVQ   +LDIL +              S G
Sbjct: 424 KFSPHDICPAPQRIPMQMVHNSMFNKTSLLLVQGISTLDILRL---------NISSDSSG 483

Query: 485 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 544
            A    LVRVKS+ +RKIICS ISN+G  FA+SD   P+L+ELKK+  +KC W+V+RR+L
Sbjct: 484 RASTKSLVRVKSRDARKIICSAISNTGSHFAYSDQIGPSLFELKKNEFTKCPWSVSRRRL 543

Query: 545 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILP-PAEPP 604
           P  LPFAHSM+FS D SRLIIAGHD+RIY +D+SSLE++++FTP RE+ +   P P EPP
Sbjct: 544 PE-LPFAHSMIFSSDCSRLIIAGHDRRIYTIDISSLELVYAFTPSREEHEGEAPTPKEPP 603

Query: 605 ITKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVT 664
           ITK+FTSSDGQWLAA+NCFGDIYVFN+E  RQHWFISRLDGAS+TA GF  WNNN LV++
Sbjct: 604 ITKLFTSSDGQWLAAINCFGDIYVFNLETQRQHWFISRLDGASVTAAGFHPWNNNALVIS 663

Query: 665 TSSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAM 724
           TSSNQ++AFD+EA+QLG WS+ +T  LPKR+QEFPGEV+GLSF PS  S  VIVYSSRA 
Sbjct: 664 TSSNQVFAFDVEARQLGKWSLLNTYVLPKRYQEFPGEVLGLSFSPSPNSSSVIVYSSRAK 723

Query: 725 CLIDFRMSVDQNDEYVMISGQDSTVKNLWGTPIN-----GK---LKRKLRDCQTEGRPHG 784
           CLIDF   V++++EY + +G  S  K L G  +N     GK    KR+L + Q EG+ + 
Sbjct: 724 CLIDFGKPVEEDEEYDLPNGNLS--KTLEGKLVNLGLKKGKGTNRKRRLDEYQLEGKSNE 783

Query: 785 RKNFENFPFRDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 822
           RKNFE  P   PVL +GHLSK S+L+IEKPW++VV + D  PV RHI+GT
Sbjct: 784 RKNFEILPSNHPVLFVGHLSKNSILVIEKPWMDVVKSLDNQPVDRHIFGT 815

[Close]
BLAST of Cp4.1LG06g02160 vs. ExPASy Swiss-Prot
Match: Q969X6 (U3 small nucleolar RNA-associated protein 4 homolog OS=Homo sapiens OX=9606 GN=UTP4 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 9.1e-52
Identity = 181/725 (24.97%), Postives = 307/725 (42.34%), Query Frame = 0 

Query: 5   YRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDPTSRV 64
           +R     + PS +  +A +   +++A +R DG++EI+ +   S  +  +    G  +   
Sbjct: 7   HRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNL---SANYFQEKFFPGHESRAT 66

Query: 65  SSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPCNSRE 124
            +L W           RLFS+ ++G I E+DL  L  K  +++ G  IW +AA+P  S+ 
Sbjct: 67  EALCWAE-------GQRLFSAGLNGEIMEYDLQALNIKYAMDAFGGPIWSMAASPSGSQ- 126

Query: 125 VHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGCVRIY 184
                                                          L + C+DG V+++
Sbjct: 127 -----------------------------------------------LLVGCEDGSVKLF 186

Query: 185 NICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRITAGL 244
            I   +++ ++R+  R   R+LS++W      I +GS D +I  ++   G  ++++    
Sbjct: 187 QI-TPDKIQFERNFDRQKSRILSLSWHPSGTHIAAGSID-YISVFDVKSGSAVHKMIVDR 246

Query: 245 GGLGSGSELC-VWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALAATP 304
             +G     C VW + FL  GT++S DS G VQFWDS  GTL+++H +   DV ++A   
Sbjct: 247 QYMGVSKRKCIVWGVAFLSDGTIISVDSAGKVQFWDSATGTLVKSHLIANADVQSIAVAD 306

Query: 305 NHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTVAVP 364
             +      ++G V  ++L      SSE        K+W+     + HTHD+R +     
Sbjct: 307 QEDSFVVGTAEGTVFHFQLVPVTSNSSE--------KQWVRTKPFQHHTHDVRTV----- 366

Query: 365 ICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFTKFS 424
                                          AH     L+SGG DT L      E  +  
Sbjct: 367 -------------------------------AH-SPTALISGGTDTHLVFRPLMEKVEVK 426

Query: 425 PHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDI--LCVRPKCGSFGDKTCGPSKGL 484
            +D        P + ++ +   +  LLL Q AH L++  L      G  GD T   SK  
Sbjct: 427 NYDAALRKITFPHRCLI-SCSKKRQLLLFQFAHHLELWRLGSTVATGKNGD-TLPLSK-- 486

Query: 485 AKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKLP 544
             AD L+ +K+K    IICS IS  G   A+S  ++  LY L     +     V+  K+P
Sbjct: 487 -NADHLLHLKTKGPENIICSCISPCGSWIAYSTVSRFFLYRLNYEHDNISLKRVS--KMP 546

Query: 545 NTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVS--SLEVLHSFTPFREQQDDILPPAEPP 604
             L  A  ++FS DS++L +A +   +++V +S  S + LH+F P   Q   +       
Sbjct: 547 AFLRSALQILFSEDSTKLFVASNQGALHIVQLSGGSFKHLHAFQP---QSGTV-----EA 606

Query: 605 ITKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVT 664
           +  +  S DG WLAA      ++V+N++ L+ H  +   +         P  NN  LV+ 
Sbjct: 607 MCLLAVSPDGNWLAASGTSAGVHVYNVKQLKLHCTVPAYNFPVTAMAIAPNTNN--LVIA 608

Query: 665 TSSNQIYAFDIEAKQLGDWSMR-HTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRA 724
            S  Q++ + I  KQ  DWS     Q     + +    +  +SF P    + ++++ +  
Sbjct: 667 HSDQQVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPITHISFHPK-RPMHILLHDAYM 608

[Close]
BLAST of Cp4.1LG06g02160 vs. ExPASy Swiss-Prot
Match: Q8R2N2 (U3 small nucleolar RNA-associated protein 4 homolog OS=Mus musculus OX=10090 GN=Utp4 PE=2 SV=3)

HSP 1 Score: 204.1 bits (518), Expect = 5.9e-51
Identity = 184/725 (25.38%), Postives = 309/725 (42.62%), Query Frame = 0 

Query: 5   YRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDPTSRV 64
           +R     + PS +  +A +   +++A +R DG++EI+ +   S  +  +    G  +   
Sbjct: 7   HRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNL---SANYFQEKFFPGHESRGT 66

Query: 65  SSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPCNSRE 124
            +L W  AG       RLFS+ ++G I E+DL  L  K  L++ G  IW + A+P  S+ 
Sbjct: 67  EALCW--AG-----GQRLFSAGLNGEILEYDLQALNIKYTLDAFGGPIWSMTASPSGSQ- 126

Query: 125 VHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGCVRIY 184
                                                          L + C+DG V+++
Sbjct: 127 -----------------------------------------------LLVGCEDGSVKLF 186

Query: 185 NICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRITAGL 244
            +   E++ + R+  R   R+LS+ W      + +GS D +I  ++   G  I ++    
Sbjct: 187 EV-TPEKIQFARNFDRQKSRILSLCWHPAGTHVAAGSLD-YISVFDVKSGSIIRKMVLDR 246

Query: 245 GGLGSGSELC-VWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALAATP 304
             LG     C VW + FL  GT++S DS G VQ WDS  GTL+++H +   DV ++A   
Sbjct: 247 QHLGVTKSRCIVWGVAFLSDGTVISVDSVGKVQLWDSATGTLVKSHLVANADVQSIAVAD 306

Query: 305 NHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTVAVP 364
             +      ++G V  ++L +    SSE        K+W+     + HTHD+RA+     
Sbjct: 307 QEDSFVVGTAEGTVFHFQLVSMTSNSSE--------KQWVRTKPFQHHTHDVRAV----- 366

Query: 365 ICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFTKFS 424
                                          AH     L+SGG DT L      E  +  
Sbjct: 367 -------------------------------AH-SPTALISGGTDTHLVIRPLMERVEVK 426

Query: 425 PHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDI--LCVRPKCGSFGDKTCGPSKGL 484
            +D        P + ++ +   +  LLL Q AH L++  L      G  GD T   SK  
Sbjct: 427 NYDAALRKITFPHRRLI-SCSKRRQLLLFQFAHHLELWRLGSTSATGKNGD-TLPLSK-- 486

Query: 485 AKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKLP 544
             AD L+ +K+K    IICS +S  G   A+S  ++  LY LK    +     V+  KLP
Sbjct: 487 -NADHLLHLKTKGPENIICSCVSPCGSWIAYSTASRFFLYRLKYERDNISLQRVS--KLP 546

Query: 545 NTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVS--SLEVLHSFTPFREQQDDILPPAEPP 604
           + L  A  ++FS DS++L++A +   +++V +S  S + LH+F P   Q   +       
Sbjct: 547 SFLRSALHILFSEDSTKLLVASNQGSLHIVHLSEGSFKHLHTFQP---QSGTV-----EA 606

Query: 605 ITKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVT 664
           +  +  S DG WLAA      ++V+++  L+ H  +   +         P  NN  LV+ 
Sbjct: 607 MCLLAVSPDGNWLAASGTSAGVHVYDLHHLKLHCTVPAYNFPVTALAIAPNTNN--LVIA 608

Query: 665 TSSNQIYAFDIEAKQLGDWSMR-HTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRA 724
            S  Q++ F I  KQ  +WS     Q   + + +    +  +SF P    + ++++ +  
Sbjct: 667 HSDQQVFEFSIPEKQYTEWSRSLQKQGFHQLWLQRDTPITHISFHPK-RPMHILLHDAYM 608

[Close]
BLAST of Cp4.1LG06g02160 vs. ExPASy Swiss-Prot
Match: O60161 (U3 small nucleolar RNA-associated protein 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp4 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 5.7e-46
Identity = 192/846 (22.70%), Postives = 344/846 (40.66%), Query Frame = 0 

Query: 2   IEFYRNSSIEWKPSPVVALASSADGSQ---------VAAAREDGSLEIWLVSPGSVGWHC 61
           ++ +R   I++ PS + A+A S    Q         +A  R  G++EIW  +P +  W  
Sbjct: 1   MDIHRCRFIDYTPSAITAMAFSHKSGQNDSMPNNLLLAVGRASGNIEIW--NPRN-DWCL 60

Query: 62  QLTINGDPTSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSI 121
           +  + G     +  +VW           RLFS     +I+EW+L         +S   +I
Sbjct: 61  KTVLYGGVDRSIEGIVWSTG----EEELRLFSIGFSTTITEWNLHTGKPLVNQDSNAGAI 120

Query: 122 WQIAAAPCNSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSL 181
           W IA                                                  DE  +L
Sbjct: 121 WSIAIC------------------------------------------------DETKTL 180

Query: 182 AIACDDGCVRIYNICDAEELI-YKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNA 241
           A+ CDDG   +++I     +I +KR L R + R+LS+ +    + +  G +DG I+ W+ 
Sbjct: 181 AVGCDDGSCVLFDISGGPGVIEFKRVLMRQTSRILSLDFQT-KDHLVGGCADGVIKVWDL 240

Query: 242 SLGHEIYRITAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTL 301
           S  +        +     G    +W++  LR GT+VSADS+G+V+FW+    TL Q+  L
Sbjct: 241 STPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSADSSGAVKFWNGKFFTLSQSFKL 300

Query: 302 HKGDVNALAATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAH 361
           H  D   L  + N + V+S+G D + I Y                   ++W+     R H
Sbjct: 301 HLADALCLGVSANGDMVFSSGIDRKTIQYSREGGK-------------REWVSNSFRRFH 360

Query: 362 THDIRALTVAVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKL 421
           +HD+R + V               E K                    + +L+SGG D  L
Sbjct: 361 SHDVRCMAV--------------FECK-------------------SLDVLISGGMDMML 420

Query: 422 FAYSAQEFTKFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFG 481
                ++F + +   I   PQR  M      V  +A L ++   H + +     + GS G
Sbjct: 421 AVIPVRQFNRKNHRMISAVPQRPRM-----AVAPKARLFMLWNDHEVLLW----RIGSPG 480

Query: 482 DKTCGPSKGLAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKC 541
            +             L+++       I  + IS  G+L A S   +  LY+L+ S  +  
Sbjct: 481 YR------------FLLKIVLADEENISHAAISPDGELIAISSVLRTKLYQLQYSDENVK 540

Query: 542 SWTVNRRKLPNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLE--VLHSFTPFREQQ 601
             TV    L N    A  + F+ D ++LI+  +D  I+++++S L+   L  F   +   
Sbjct: 541 VETVEDSFLSNI--GASLLSFTVDKNKLILVSNDSEIFLIELSRLDSRQLEVFELSQPTS 600

Query: 602 DDILPPAEPPIT-------KIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGAS 661
             I P     ++        I  SSDG + A  +  G+I+ +++  L  +  + R++   
Sbjct: 601 KKIAPRQRSNVSSMCDGICSIAVSSDGDYFAVADTVGNIFCYSLSNL-TYSELPRVN-TY 660

Query: 662 ITAGGFPQWNNNVLVVTTSSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSF 721
           + A  F       L V T+ NQ+Y FD+++++L +WS  ++  +PK F +   +  G  F
Sbjct: 661 VRAMAFRPDVRGRLAVATAGNQVYEFDVQSRKLSEWSKNNSTNMPKEFSQLLDKAFGAFF 710

Query: 722 PPSTTSLPVIVYSSRAMCLIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLK-RKLR 781
                S    ++S+  +   D  + +         +G+     N     ++G L  +KL 
Sbjct: 721 DSKHPS-RFWIWSANWVSFFDLNLQLPA----PRAAGKRKIEMN---ATVDGNLNDKKLA 710

Query: 782 DCQTEGRPH-----GRKNFENFPFRDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAP-PVH 822
           +  + G  +      R  +    +R P+LL+G +  + LL++E+P  +++ +   P   +
Sbjct: 781 NANSNGISNYGTGDSRCFWITHKYR-PMLLVGSVGNSELLVVERPIADMLMSKSMPASFY 710

[Close]
BLAST of Cp4.1LG06g02160 vs. ExPASy Swiss-Prot
Match: Q06679 (U3 small nucleolar RNA-associated protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP4 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.6e-24
Identity = 158/737 (21.44%), Postives = 285/737 (38.67%), Query Frame = 0 

Query: 5   YRNSSIEWKPSPVVALASSADGS---------QVAAAREDGSLEIWLVSPGSVGWHCQLT 64
           +R   +++ P+ + +LA S   +         ++A  R +G++EIW  +P +  W  ++ 
Sbjct: 34  HRCRFVDFTPATITSLAFSHKSNINKLTPSDLRLAIGRSNGNIEIW--NPRN-NWFQEMV 93

Query: 65  INGDPTSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQI 124
           I G     +  L W      +  S RLFS      ++EWDL          + GL +   
Sbjct: 94  IEGGKDRSIEGLCWSNV---NGESLRLFSIGGSTVVTEWDL----------ATGLPLRNY 153

Query: 125 AAAPCNSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIA 184
               CNS  +                                     +  +D    L++ 
Sbjct: 154 ---DCNSGVI-----------------------------------WSISINDSQDKLSVG 213

Query: 185 CDDGCVRIYNICDAEELI-YKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNA--- 244
           CD+G V + +I     ++ +   L R   RVL++ W  D + +  G SDG IR W+A   
Sbjct: 214 CDNGTVVLIDISGGPGVLEHDTILMRQEARVLTLAWKKD-DFVIGGCSDGRIRIWSAQKN 273

Query: 245 --SLGHEIYRITAGLGGLGSGSELCVWSLLFL-RCGTLVSADSTGSVQFWDSNHGTLLQA 304
             ++G  ++ +              VWS+++L R   + S DSTGS++FWD    TL Q+
Sbjct: 274 DENMGRLLHTMKV---DKAKKESTLVWSVIYLPRTDQIASGDSTGSIKFWDFQFATLNQS 333

Query: 305 HTLHKGDVNALAATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHV 364
              H  DV  L    ++N V+SAG D ++  +         S++   S+   +W+   + 
Sbjct: 334 FKAHDADVLCLTTDTDNNYVFSAGVDRKIFQF---------SQNTNKSQKNNRWVNSSNR 393

Query: 365 RAHTHDIRALTVAVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDD 424
             H +DIRA      IC   ++                           G   L+SGG +
Sbjct: 394 LLHGNDIRA------ICAYQSK---------------------------GADFLVSGGVE 453

Query: 425 TKLFAYSAQEFTKFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCG 484
             L   S    T FS  +    P   P     N + N+   L+V  + S        K  
Sbjct: 454 KTLVINS---LTSFSNGNYRKMPTVEPYS--KNVLVNKEQRLVVSWSES------TVKIW 513

Query: 485 SFGDKTCGPSKGLAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGG 544
           + G      S       L+ ++  K  + I   ++S  G++      +   ++ L+  G 
Sbjct: 514 TMGT----DSSTEQNYKLVCKLTLKDDQNISTCSLSPDGQVLVVGRPSTTKVFHLQPVGN 573

Query: 545 SKCSWTVNRRKLPNTLPFAHS--MVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFR 604
                 +   KL N L    S  +V   D+S+++I   +  +++VD+ S           
Sbjct: 574 K-----LKVTKLDNDLLLRTSTKLVKFIDNSKIVICSCEDDVFIVDLES----------- 633

Query: 605 EQQDDILPPAEPPITKIFTSSDGQWLAAVNCFGDIYV-FNMEIL-RQHWFISRLDGASIT 664
            ++D+   P E  + ++ ++     +  +N    + V  N+ ++ R    +  LD  +  
Sbjct: 634 -EEDE--KPQEVELLEVTSTKSSIKVPYINRINHLEVDQNIAVISRGCGVVDILDLKARI 636

Query: 665 AGGFPQWNNNV-----------LVVTTSSNQIYAFDI----EAKQ------LGDWSMRHT 701
           +    + NN +           +VV T+ N+IY F++    EA+       L  WS  +T
Sbjct: 694 SKPLARLNNFITAVHINTSRKSVVVITADNKIYEFNMNLNSEAENEDSESVLTQWSKNNT 636

[Close]
BLAST of Cp4.1LG06g02160 vs. NCBI nr
Match: XP_023535890.1 (U3 small nucleolar RNA-associated protein 4 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1684 bits (4360), Expect = 0.0
Identity = 821/821 (100.00%), Postives = 821/821 (100.00%), Query Frame = 0 

Query: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60
           MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP
Sbjct: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60

Query: 61  TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120
           TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC
Sbjct: 61  TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120

Query: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC 180
           NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC
Sbjct: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC 180

Query: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240
           VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI
Sbjct: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240

Query: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300
           TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA
Sbjct: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300

Query: 301 ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV 360
           ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV
Sbjct: 301 ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV 360

Query: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420
           AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT
Sbjct: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420

Query: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480
           KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG
Sbjct: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480

Query: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540
           LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL
Sbjct: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540

Query: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600
           PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI
Sbjct: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600

Query: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660
           TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT
Sbjct: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660

Query: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720
           SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC
Sbjct: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720

Query: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780
           LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF
Sbjct: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780

Query: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821
           RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT
Sbjct: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821

[Close]
BLAST of Cp4.1LG06g02160 vs. NCBI nr
Match: XP_023535891.1 (U3 small nucleolar RNA-associated protein 4 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1677 bits (4344), Expect = 0.0
Identity = 820/821 (99.88%), Postives = 820/821 (99.88%), Query Frame = 0 

Query: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60
           MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP
Sbjct: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60

Query: 61  TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120
           TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC
Sbjct: 61  TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120

Query: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC 180
           NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC
Sbjct: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC 180

Query: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240
           VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI
Sbjct: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240

Query: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300
           TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA
Sbjct: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300

Query: 301 ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV 360
           ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV
Sbjct: 301 ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV 360

Query: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420
           AVPICREA EASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT
Sbjct: 361 AVPICREA-EASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420

Query: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480
           KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG
Sbjct: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480

Query: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540
           LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL
Sbjct: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540

Query: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600
           PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI
Sbjct: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600

Query: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660
           TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT
Sbjct: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660

Query: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720
           SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC
Sbjct: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720

Query: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780
           LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF
Sbjct: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780

Query: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821
           RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT
Sbjct: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 820

[Close]
BLAST of Cp4.1LG06g02160 vs. NCBI nr
Match: KAG6591430.1 (WD repeat-containing protein PCN, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1669 bits (4323), Expect = 0.0
Identity = 813/821 (99.03%), Postives = 817/821 (99.51%), Query Frame = 0 

Query: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60
           MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP
Sbjct: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60

Query: 61  TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120
           TSRVSSLVWCRAG KDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC
Sbjct: 61  TSRVSSLVWCRAGSKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120

Query: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC 180
           NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSS+LHVQASDED  LAIACDDGC
Sbjct: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSKLHVQASDEDPCLAIACDDGC 180

Query: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240
           VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHE+YRI
Sbjct: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEVYRI 240

Query: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300
           TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA
Sbjct: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300

Query: 301 ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV 360
           ATPNHNRVYSAGSDGQVILY+LSNENVVSSEDKYSSE+MKKWIYVGHVRAHTHDIRALTV
Sbjct: 301 ATPNHNRVYSAGSDGQVILYKLSNENVVSSEDKYSSEMMKKWIYVGHVRAHTHDIRALTV 360

Query: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420
           AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT
Sbjct: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420

Query: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480
           KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG
Sbjct: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480

Query: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540
           LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDH KPNLYELKKSGGSKCSWTVNRRKL
Sbjct: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHAKPNLYELKKSGGSKCSWTVNRRKL 540

Query: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600
           PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI
Sbjct: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600

Query: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660
           TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT
Sbjct: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660

Query: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720
           SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC
Sbjct: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720

Query: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780
           LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF
Sbjct: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780

Query: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821
           RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT
Sbjct: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821

[Close]
BLAST of Cp4.1LG06g02160 vs. NCBI nr
Match: KAG7024310.1 (U3 small nucleolar RNA-associated protein 4-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1667 bits (4317), Expect = 0.0
Identity = 812/821 (98.90%), Postives = 816/821 (99.39%), Query Frame = 0 

Query: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60
           MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP
Sbjct: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60

Query: 61  TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120
           TSRVSSLVWCRAG KDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC
Sbjct: 61  TSRVSSLVWCRAGSKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120

Query: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC 180
           NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSS+LHVQASDED  LAIACDDGC
Sbjct: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSKLHVQASDEDPCLAIACDDGC 180

Query: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240
           VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHE+YRI
Sbjct: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEVYRI 240

Query: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300
           TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA
Sbjct: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300

Query: 301 ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV 360
           ATP HNRVYSAGSDGQVILY+LSNENVVSSEDKYSSE+MKKWIYVGHVRAHTHDIRALTV
Sbjct: 301 ATPKHNRVYSAGSDGQVILYKLSNENVVSSEDKYSSEMMKKWIYVGHVRAHTHDIRALTV 360

Query: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420
           AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT
Sbjct: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420

Query: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480
           KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG
Sbjct: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480

Query: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540
           LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDH KPNLYELKKSGGSKCSWTVNRRKL
Sbjct: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHAKPNLYELKKSGGSKCSWTVNRRKL 540

Query: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600
           PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI
Sbjct: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600

Query: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660
           TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT
Sbjct: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660

Query: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720
           SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC
Sbjct: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720

Query: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780
           LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF
Sbjct: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780

Query: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821
           RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT
Sbjct: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821

[Close]
BLAST of Cp4.1LG06g02160 vs. NCBI nr
Match: XP_022936101.1 (U3 small nucleolar RNA-associated protein 4 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 1667 bits (4316), Expect = 0.0
Identity = 811/821 (98.78%), Postives = 816/821 (99.39%), Query Frame = 0 

Query: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60
           MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP
Sbjct: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60

Query: 61  TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120
           TSRVSSLVWCRAG KDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC
Sbjct: 61  TSRVSSLVWCRAGSKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120

Query: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC 180
           NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSS+LHVQASDED  LAIACDDGC
Sbjct: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSKLHVQASDEDPCLAIACDDGC 180

Query: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240
           VRIYNICD EELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHE+YRI
Sbjct: 181 VRIYNICDVEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEVYRI 240

Query: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300
           TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA
Sbjct: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300

Query: 301 ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV 360
           ATPNHNRVYSAGSDGQVILY+LSNENV+SSEDKYSSE+MKKWIYVGHVRAHTHDIRALTV
Sbjct: 301 ATPNHNRVYSAGSDGQVILYKLSNENVLSSEDKYSSEMMKKWIYVGHVRAHTHDIRALTV 360

Query: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420
           AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT
Sbjct: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420

Query: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480
           KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG
Sbjct: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480

Query: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540
           LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDH KPNLYELKKSGGSKCSWTVNRRKL
Sbjct: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHAKPNLYELKKSGGSKCSWTVNRRKL 540

Query: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600
           PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI
Sbjct: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600

Query: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660
           TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT
Sbjct: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660

Query: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720
           SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC
Sbjct: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720

Query: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780
           LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF
Sbjct: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780

Query: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821
           RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT
Sbjct: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821

[Close]
BLAST of Cp4.1LG06g02160 vs. ExPASy TrEMBL
Match: A0A6J1F6K3 (U3 small nucleolar RNA-associated protein 4 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442803 PE=4 SV=1)

HSP 1 Score: 1667 bits (4316), Expect = 0.0
Identity = 811/821 (98.78%), Postives = 816/821 (99.39%), Query Frame = 0 

Query: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60
           MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP
Sbjct: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60

Query: 61  TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120
           TSRVSSLVWCRAG KDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC
Sbjct: 61  TSRVSSLVWCRAGSKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120

Query: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC 180
           NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSS+LHVQASDED  LAIACDDGC
Sbjct: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSKLHVQASDEDPCLAIACDDGC 180

Query: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240
           VRIYNICD EELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHE+YRI
Sbjct: 181 VRIYNICDVEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEVYRI 240

Query: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300
           TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA
Sbjct: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300

Query: 301 ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV 360
           ATPNHNRVYSAGSDGQVILY+LSNENV+SSEDKYSSE+MKKWIYVGHVRAHTHDIRALTV
Sbjct: 301 ATPNHNRVYSAGSDGQVILYKLSNENVLSSEDKYSSEMMKKWIYVGHVRAHTHDIRALTV 360

Query: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420
           AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT
Sbjct: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420

Query: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480
           KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG
Sbjct: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480

Query: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540
           LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDH KPNLYELKKSGGSKCSWTVNRRKL
Sbjct: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHAKPNLYELKKSGGSKCSWTVNRRKL 540

Query: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600
           PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI
Sbjct: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600

Query: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660
           TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT
Sbjct: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660

Query: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720
           SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC
Sbjct: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720

Query: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780
           LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF
Sbjct: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780

Query: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821
           RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT
Sbjct: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821

[Close]
BLAST of Cp4.1LG06g02160 vs. ExPASy TrEMBL
Match: A0A6J1F7H5 (U3 small nucleolar RNA-associated protein 4 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442803 PE=4 SV=1)

HSP 1 Score: 1660 bits (4300), Expect = 0.0
Identity = 810/821 (98.66%), Postives = 815/821 (99.27%), Query Frame = 0 

Query: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60
           MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP
Sbjct: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60

Query: 61  TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120
           TSRVSSLVWCRAG KDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC
Sbjct: 61  TSRVSSLVWCRAGSKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120

Query: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC 180
           NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSS+LHVQASDED  LAIACDDGC
Sbjct: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSKLHVQASDEDPCLAIACDDGC 180

Query: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240
           VRIYNICD EELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHE+YRI
Sbjct: 181 VRIYNICDVEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEVYRI 240

Query: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300
           TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA
Sbjct: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300

Query: 301 ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV 360
           ATPNHNRVYSAGSDGQVILY+LSNENV+SSEDKYSSE+MKKWIYVGHVRAHTHDIRALTV
Sbjct: 301 ATPNHNRVYSAGSDGQVILYKLSNENVLSSEDKYSSEMMKKWIYVGHVRAHTHDIRALTV 360

Query: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420
           AVPICREA EASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT
Sbjct: 361 AVPICREA-EASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420

Query: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480
           KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG
Sbjct: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480

Query: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540
           LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDH KPNLYELKKSGGSKCSWTVNRRKL
Sbjct: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHAKPNLYELKKSGGSKCSWTVNRRKL 540

Query: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600
           PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI
Sbjct: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600

Query: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660
           TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT
Sbjct: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660

Query: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720
           SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC
Sbjct: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720

Query: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780
           LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF
Sbjct: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780

Query: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821
           RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT
Sbjct: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 820

[Close]
BLAST of Cp4.1LG06g02160 vs. ExPASy TrEMBL
Match: A0A6J1FCB4 (U3 small nucleolar RNA-associated protein 4 homolog isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111442803 PE=4 SV=1)

HSP 1 Score: 1659 bits (4295), Expect = 0.0
Identity = 809/821 (98.54%), Postives = 814/821 (99.15%), Query Frame = 0 

Query: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60
           MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP
Sbjct: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60

Query: 61  TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120
           TSRVSSLVWCRAG KDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC
Sbjct: 61  TSRVSSLVWCRAGSKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120

Query: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC 180
           NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSS+LHVQASDED  LAIACDDGC
Sbjct: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSKLHVQASDEDPCLAIACDDGC 180

Query: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240
           VRIYNICD EELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHE+YRI
Sbjct: 181 VRIYNICDVEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEVYRI 240

Query: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300
           TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA
Sbjct: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300

Query: 301 ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV 360
           ATPNHNRVYSAGSDGQVILY+LSNENV+SSEDKYSSE+MKKWIYVGHVRAHTHDIRALTV
Sbjct: 301 ATPNHNRVYSAGSDGQVILYKLSNENVLSSEDKYSSEMMKKWIYVGHVRAHTHDIRALTV 360

Query: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420
           AVPICRE  EASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT
Sbjct: 361 AVPICRE--EASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420

Query: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480
           KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG
Sbjct: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480

Query: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540
           LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDH KPNLYELKKSGGSKCSWTVNRRKL
Sbjct: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHAKPNLYELKKSGGSKCSWTVNRRKL 540

Query: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600
           PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI
Sbjct: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600

Query: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660
           TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT
Sbjct: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660

Query: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720
           SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC
Sbjct: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720

Query: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780
           LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF
Sbjct: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780

Query: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821
           RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT
Sbjct: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 819

[Close]
BLAST of Cp4.1LG06g02160 vs. ExPASy TrEMBL
Match: A0A6J1IID9 (U3 small nucleolar RNA-associated protein 4 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477183 PE=4 SV=1)

HSP 1 Score: 1645 bits (4260), Expect = 0.0
Identity = 805/821 (98.05%), Postives = 811/821 (98.78%), Query Frame = 0 

Query: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60
           MIEFYRNSSIEWKPSPVVALASSADGSQVAAARED SLEIWLVSPGSVGWHCQLTINGDP
Sbjct: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDASLEIWLVSPGSVGWHCQLTINGDP 60

Query: 61  TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120
           TSRVSSLVWCRAG KDRPSGRLFSSSIDGS+SEWDLFGLTQKSVLESIGLSIWQIAAAPC
Sbjct: 61  TSRVSSLVWCRAGSKDRPSGRLFSSSIDGSLSEWDLFGLTQKSVLESIGLSIWQIAAAPC 120

Query: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC 180
           NSREVHREVKPKEIENAHVT NESDCQDC ESEDDSNSSELHVQASDED SLAIACDDGC
Sbjct: 121 NSREVHREVKPKEIENAHVTVNESDCQDCGESEDDSNSSELHVQASDEDPSLAIACDDGC 180

Query: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240
           VRIYNICD EELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI
Sbjct: 181 VRIYNICDGEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240

Query: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300
           TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA
Sbjct: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300

Query: 301 ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV 360
           ATPNHNRV+SAGSDGQVILY+LSNENVVSSEDKYSSE+MKKWIYVGHVRAHTHDIRALTV
Sbjct: 301 ATPNHNRVFSAGSDGQVILYKLSNENVVSSEDKYSSEMMKKWIYVGHVRAHTHDIRALTV 360

Query: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420
           AVPICREAAEASQDVEVKRIRHKRKPN FSYHKWAHLGVP+LMSGGDDTKLFAYSAQEFT
Sbjct: 361 AVPICREAAEASQDVEVKRIRHKRKPNVFSYHKWAHLGVPILMSGGDDTKLFAYSAQEFT 420

Query: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480
           KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDIL VRPKCGSFGDKTCGPSKG
Sbjct: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILRVRPKCGSFGDKTCGPSKG 480

Query: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540
           LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL
Sbjct: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540

Query: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600
           PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI
Sbjct: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600

Query: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660
           TKIFTSSDGQWLAAVNCFGD+YVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT
Sbjct: 601 TKIFTSSDGQWLAAVNCFGDLYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660

Query: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720
           SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC
Sbjct: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720

Query: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780
           LIDFRMSVDQNDEYVMISGQDSTVKNL GT INGKLKRKLRDCQTEGRPHGRKNFENFPF
Sbjct: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLRGTTINGKLKRKLRDCQTEGRPHGRKNFENFPF 780

Query: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821
           RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT
Sbjct: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821

[Close]
BLAST of Cp4.1LG06g02160 vs. ExPASy TrEMBL
Match: A0A6J1IH66 (U3 small nucleolar RNA-associated protein 4 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477183 PE=4 SV=1)

HSP 1 Score: 1639 bits (4244), Expect = 0.0
Identity = 804/821 (97.93%), Postives = 810/821 (98.66%), Query Frame = 0 

Query: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDP 60
           MIEFYRNSSIEWKPSPVVALASSADGSQVAAARED SLEIWLVSPGSVGWHCQLTINGDP
Sbjct: 1   MIEFYRNSSIEWKPSPVVALASSADGSQVAAAREDASLEIWLVSPGSVGWHCQLTINGDP 60

Query: 61  TSRVSSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPC 120
           TSRVSSLVWCRAG KDRPSGRLFSSSIDGS+SEWDLFGLTQKSVLESIGLSIWQIAAAPC
Sbjct: 61  TSRVSSLVWCRAGSKDRPSGRLFSSSIDGSLSEWDLFGLTQKSVLESIGLSIWQIAAAPC 120

Query: 121 NSREVHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGC 180
           NSREVHREVKPKEIENAHVT NESDCQDC ESEDDSNSSELHVQASDED SLAIACDDGC
Sbjct: 121 NSREVHREVKPKEIENAHVTVNESDCQDCGESEDDSNSSELHVQASDEDPSLAIACDDGC 180

Query: 181 VRIYNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240
           VRIYNICD EELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI
Sbjct: 181 VRIYNICDGEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRI 240

Query: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300
           TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA
Sbjct: 241 TAGLGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALA 300

Query: 301 ATPNHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTV 360
           ATPNHNRV+SAGSDGQVILY+LSNENVVSSEDKYSSE+MKKWIYVGHVRAHTHDIRALTV
Sbjct: 301 ATPNHNRVFSAGSDGQVILYKLSNENVVSSEDKYSSEMMKKWIYVGHVRAHTHDIRALTV 360

Query: 361 AVPICREAAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 420
           AVPICREA EASQDVEVKRIRHKRKPN FSYHKWAHLGVP+LMSGGDDTKLFAYSAQEFT
Sbjct: 361 AVPICREA-EASQDVEVKRIRHKRKPNVFSYHKWAHLGVPILMSGGDDTKLFAYSAQEFT 420

Query: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 480
           KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDIL VRPKCGSFGDKTCGPSKG
Sbjct: 421 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILRVRPKCGSFGDKTCGPSKG 480

Query: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540
           LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL
Sbjct: 481 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 540

Query: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600
           PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI
Sbjct: 541 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPI 600

Query: 601 TKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660
           TKIFTSSDGQWLAAVNCFGD+YVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT
Sbjct: 601 TKIFTSSDGQWLAAVNCFGDLYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTT 660

Query: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720
           SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC
Sbjct: 661 SSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMC 720

Query: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFENFPF 780
           LIDFRMSVDQNDEYVMISGQDSTVKNL GT INGKLKRKLRDCQTEGRPHGRKNFENFPF
Sbjct: 721 LIDFRMSVDQNDEYVMISGQDSTVKNLRGTTINGKLKRKLRDCQTEGRPHGRKNFENFPF 780

Query: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 821
           RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT
Sbjct: 781 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 820

[Close]
BLAST of Cp4.1LG06g02160 vs. TAIR 10
Match: AT4G07410.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 1033.9 bits (2672), Expect = 7.1e-302
Identity = 525/830 (63.25%), Postives = 633/830 (76.27%), Query Frame = 0 

Query: 5   YRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDPTSRV 64
           YR SS++WKPSPVVALA+S+D SQVAAAREDGSLEIWLVSPG+VGWHCQLTI+GDP SR+
Sbjct: 4   YRCSSVDWKPSPVVALANSSDDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRI 63

Query: 65  SSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPCNSRE 124
           SSL WC +     PSGRLFSSSIDGSISEWDLF L QK VLESIG+SIWQ+A AP +   
Sbjct: 64  SSLAWCCSPSIGLPSGRLFSSSIDGSISEWDLFDLKQKIVLESIGISIWQMALAPISGFS 123

Query: 125 VHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDE-DHSLAIACDDGCVRI 184
              E     I+N ++++  +D ++    ED S+S E H ++ +E D  LA ACDDGCVR+
Sbjct: 124 SDVE----GIKNGYLSEKSNDEEEIGSEEDGSDSDEFHEKSEEEIDRILAAACDDGCVRL 183

Query: 185 YNICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRITAG 244
           Y I + E+L Y RSLPRVSGR LSVTWS DA+RIFSGSSDG IRCW+A+  HE+YRITAG
Sbjct: 184 YRISNLEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAG 243

Query: 245 LGGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALAATP 304
           LGGLGS SE+CVWSLL LRC  LVS DSTG+VQFWDS HGTLL+AH+ HKGDVN LAA P
Sbjct: 244 LGGLGSSSEICVWSLLSLRCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAP 303

Query: 305 NHNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTVAVP 364
           +HNRV+SAG+DGQVILY+LS     S + K SS   +KW Y+G+V+AHTHDIRALTVAVP
Sbjct: 304 SHNRVFSAGADGQVILYKLSGSTNGSQDLKPSSS--QKWDYIGYVKAHTHDIRALTVAVP 363

Query: 365 ICRE---AAEASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFT 424
           I RE     +   D   ++ R K KP DF+YHKWAHLGVPML+S GDD KLFAYS QEFT
Sbjct: 364 ISREDPFPDDILPDKASRKHRKKGKPVDFTYHKWAHLGVPMLISAGDDAKLFAYSIQEFT 423

Query: 425 KFSPHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKG 484
           KFSPHDICPAPQR+PMQ+V N++FN+  LLLVQ   +LDIL +              S G
Sbjct: 424 KFSPHDICPAPQRIPMQMVHNSMFNKTSLLLVQGISTLDILRL---------NISSDSSG 483

Query: 485 LAKADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKL 544
            A    LVRVKS+ +RKIICS ISN+G  FA+SD   P+L+ELKK+  +KC W+V+RR+L
Sbjct: 484 RASTKSLVRVKSRDARKIICSAISNTGSHFAYSDQIGPSLFELKKNEFTKCPWSVSRRRL 543

Query: 545 PNTLPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILP-PAEPP 604
           P  LPFAHSM+FS D SRLIIAGHD+RIY +D+SSLE++++FTP RE+ +   P P EPP
Sbjct: 544 PE-LPFAHSMIFSSDCSRLIIAGHDRRIYTIDISSLELVYAFTPSREEHEGEAPTPKEPP 603

Query: 605 ITKIFTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVT 664
           ITK+FTSSDGQWLAA+NCFGDIYVFN+E  RQHWFISRLDGAS+TA GF  WNNN LV++
Sbjct: 604 ITKLFTSSDGQWLAAINCFGDIYVFNLETQRQHWFISRLDGASVTAAGFHPWNNNALVIS 663

Query: 665 TSSNQIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAM 724
           TSSNQ++AFD+EA+QLG WS+ +T  LPKR+QEFPGEV+GLSF PS  S  VIVYSSRA 
Sbjct: 664 TSSNQVFAFDVEARQLGKWSLLNTYVLPKRYQEFPGEVLGLSFSPSPNSSSVIVYSSRAK 723

Query: 725 CLIDFRMSVDQNDEYVMISGQDSTVKNLWGTPIN-----GK---LKRKLRDCQTEGRPHG 784
           CLIDF   V++++EY + +G  S  K L G  +N     GK    KR+L + Q EG+ + 
Sbjct: 724 CLIDFGKPVEEDEEYDLPNGNLS--KTLEGKLVNLGLKKGKGTNRKRRLDEYQLEGKSNE 783

Query: 785 RKNFENFPFRDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 822
           RKNFE  P   PVL +GHLSK S+L+IEKPW++VV + D  PV RHI+GT
Sbjct: 784 RKNFEILPSNHPVLFVGHLSKNSILVIEKPWMDVVKSLDNQPVDRHIFGT 815

[Close]
BLAST of Cp4.1LG06g02160 vs. TAIR 10
Match: AT1G27470.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 993.8 bits (2568), Expect = 8.2e-290
Identity = 509/825 (61.70%), Postives = 617/825 (74.79%), Query Frame = 0 

Query: 5   YRNSSIEWKPSPVVALASSADGSQVAAAREDGSLEIWLVSPGSVGWHCQLTINGDPTSRV 64
           YR SSI+WKPSPVVALA+SADGSQVAAAREDGSLE+WLVSPG+  WHCQL I+GDP SR+
Sbjct: 4   YRCSSIDWKPSPVVALATSADGSQVAAAREDGSLELWLVSPGASSWHCQLIIHGDPKSRI 63

Query: 65  SSLVWCRAGLKDRPSGRLFSSSIDGSISEWDLFGLTQKSVLESIGLSIWQIAAAPCNSRE 124
           S L W   G K   S RLFSSSIDGSISEWDLF L QK VL+SIG SIWQIA AP +   
Sbjct: 64  SHLAWFGTGSKGSSSARLFSSSIDGSISEWDLFDLKQKVVLDSIGFSIWQIALAPISIEA 123

Query: 125 VHREVKPKEIENAHVTDNESDCQDCSESEDDSNSSELHVQASDEDHSLAIACDDGCVRIY 184
             +E   K I+N ++++ +SD ++ S  EDDS   EL  +    D  LA ACDDGCVRIY
Sbjct: 124 ESKEA--KLIQNGYLSE-KSDDEEESGVEDDSELDELDEKVEALDRHLAAACDDGCVRIY 183

Query: 185 NICDAEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRITAGL 244
            I ++++L Y RSLPRV+GR LSVTWS DA+RIFSGSSDG IRCW+A+L HE+YRIT GL
Sbjct: 184 YISESDKLTYYRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCWDANLCHEVYRITVGL 243

Query: 245 GGLGSGSELCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALAATPN 304
           GGLG+GSELC+WSLL LR G LVS DSTGSVQFWDS HGTLLQAH+ HKGDVNALAA+P+
Sbjct: 244 GGLGNGSELCIWSLLSLRYGVLVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPS 303

Query: 305 HNRVYSAGSDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTVAVPI 364
           HNRV+SAG+DGQVILY+LS     S + K SS   +KW Y+G VRAHTHDIRALTVAVPI
Sbjct: 304 HNRVFSAGADGQVILYKLSGGTSRSQDFKPSS--AQKWDYIGCVRAHTHDIRALTVAVPI 363

Query: 365 CREAAEASQDVEVKRIRHKRK-PNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFTKFS 424
             E +   ++ +V   + +RK P  FSYHKWAHLGVPML+S GDD KL+AYS QEFTKF 
Sbjct: 364 SWEGSIPDRNAKVTSPKQRRKEPAGFSYHKWAHLGVPMLISAGDDAKLYAYSVQEFTKFP 423

Query: 425 PHDICPAPQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKGLAK 484
           PHDICPAPQRVPMQ+V NTVFNQ  LLLVQ + SLDIL +     S G  +  P      
Sbjct: 424 PHDICPAPQRVPMQMVHNTVFNQTSLLLVQDSCSLDILRIHISNDSSGRVSTKP------ 483

Query: 485 ADLLVRVKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKLPNT 544
              LVRVKSK +RKIICS ISN+G LFA+SD  +P+L+ELKK+   K  W+ NR++LPN 
Sbjct: 484 ---LVRVKSKDARKIICSAISNTGSLFAYSDQVRPSLFELKKNKIGKNPWSANRKRLPN- 543

Query: 545 LPFAHSMVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILPPAEPPITKI 604
           LPFAHSMVFS D SRLIIAGHD+RIY+VDV S+E+LHSFTP +E Q+   PP EPPITK+
Sbjct: 544 LPFAHSMVFSCDCSRLIIAGHDRRIYIVDVGSMELLHSFTPRQEGQEGESPPHEPPITKL 603

Query: 605 FTSSDGQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTTSSN 664
           +TSS+  WLAA+NCFGDIYVFN+E  RQHWFISRLDGAS+ A GF   +NNV+V++TSSN
Sbjct: 604 YTSSNDDWLAAINCFGDIYVFNLETQRQHWFISRLDGASVAAAGFHPRDNNVIVISTSSN 663

Query: 665 QIYAFDIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMCLID 724
           Q++A D+EA++L  WS+  T  LPK +Q FPGEV+GLSF PS  S  VI+YSSRA CLI+
Sbjct: 664 QVFALDVEARELSKWSLLQTFCLPKSYQNFPGEVVGLSFSPSPCSSSVIIYSSRAKCLIE 723

Query: 725 FRMSVDQNDE-------YVMISGQDSTVKNLWGTPINGKLKRKLRDCQTEGRPHGRKNFE 784
           F    +Q+++          + G+ +++    G   NG  KR+L + Q E + + RK FE
Sbjct: 724 FGKPAEQDEDTDTPCNLSEKLEGKLASISMKLG---NGAQKRRLEEYQKESKSNKRKKFE 783

Query: 785 NFPFRDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 822
               + PVL + HLSK+++L+IEKPW+EV+   D  PVHRHI+GT
Sbjct: 784 MVTSKHPVLYLRHLSKSAILVIEKPWMEVIKNLDTQPVHRHIFGT 810

[Close]
BLAST of Cp4.1LG06g02160 vs. TAIR 10
Match: AT4G07410.2 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 856.7 bits (2212), Expect = 1.6e-248
Identity = 433/701 (61.77%), Postives = 530/701 (75.61%), Query Frame = 0 

Query: 134 IENAHVTDNESDCQDCSESEDDSNSSELHVQASDE-DHSLAIACDDGCVRIYNICDAEEL 193
           I+N ++++  +D ++    ED S+S E H ++ +E D  LA ACDDGCVR+Y I + E+L
Sbjct: 16  IKNGYLSEKSNDEEEIGSEEDGSDSDEFHEKSEEEIDRILAAACDDGCVRLYRISNLEKL 75

Query: 194 IYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRITAGLGGLGSGSE 253
            Y RSLPRVSGR LSVTWS DA+RIFSGSSDG IRCW+A+  HE+YRITAGLGGLGS SE
Sbjct: 76  TYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSE 135

Query: 254 LCVWSLLFLRCGTLVSADSTGSVQFWDSNHGTLLQAHTLHKGDVNALAATPNHNRVYSAG 313
           +CVWSLL LRC  LVS DSTG+VQFWDS HGTLL+AH+ HKGDVN LAA P+HNRV+SAG
Sbjct: 136 ICVWSLLSLRCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAG 195

Query: 314 SDGQVILYRLSNENVVSSEDKYSSEIMKKWIYVGHVRAHTHDIRALTVAVPICRE---AA 373
           +DGQVILY+LS     S + K SS   +KW Y+G+V+AHTHDIRALTVAVPI RE     
Sbjct: 196 ADGQVILYKLSGSTNGSQDLKPSSS--QKWDYIGYVKAHTHDIRALTVAVPISREDPFPD 255

Query: 374 EASQDVEVKRIRHKRKPNDFSYHKWAHLGVPMLMSGGDDTKLFAYSAQEFTKFSPHDICP 433
           +   D   ++ R K KP DF+YHKWAHLGVPML+S GDD KLFAYS QEFTKFSPHDICP
Sbjct: 256 DILPDKASRKHRKKGKPVDFTYHKWAHLGVPMLISAGDDAKLFAYSIQEFTKFSPHDICP 315

Query: 434 APQRVPMQLVLNTVFNQAPLLLVQAAHSLDILCVRPKCGSFGDKTCGPSKGLAKADLLVR 493
           APQR+PMQ+V N++FN+  LLLVQ   +LDIL +              S G A    LVR
Sbjct: 316 APQRIPMQMVHNSMFNKTSLLLVQGISTLDILRL---------NISSDSSGRASTKSLVR 375

Query: 494 VKSKASRKIICSTISNSGKLFAFSDHTKPNLYELKKSGGSKCSWTVNRRKLPNTLPFAHS 553
           VKS+ +RKIICS ISN+G  FA+SD   P+L+ELKK+  +KC W+V+RR+LP  LPFAHS
Sbjct: 376 VKSRDARKIICSAISNTGSHFAYSDQIGPSLFELKKNEFTKCPWSVSRRRLPE-LPFAHS 435

Query: 554 MVFSFDSSRLIIAGHDKRIYVVDVSSLEVLHSFTPFREQQDDILP-PAEPPITKIFTSSD 613
           M+FS D SRLIIAGHD+RIY +D+SSLE++++FTP RE+ +   P P EPPITK+FTSSD
Sbjct: 436 MIFSSDCSRLIIAGHDRRIYTIDISSLELVYAFTPSREEHEGEAPTPKEPPITKLFTSSD 495

Query: 614 GQWLAAVNCFGDIYVFNMEILRQHWFISRLDGASITAGGFPQWNNNVLVVTTSSNQIYAF 673
           GQWLAA+NCFGDIYVFN+E  RQHWFISRLDGAS+TA GF  WNNN LV++TSSNQ++AF
Sbjct: 496 GQWLAAINCFGDIYVFNLETQRQHWFISRLDGASVTAAGFHPWNNNALVISTSSNQVFAF 555

Query: 674 DIEAKQLGDWSMRHTQALPKRFQEFPGEVIGLSFPPSTTSLPVIVYSSRAMCLIDFRMSV 733
           D+EA+QLG WS+ +T  LPKR+QEFPGEV+GLSF PS  S  VIVYSSRA CLIDF   V
Sbjct: 556 DVEARQLGKWSLLNTYVLPKRYQEFPGEVLGLSFSPSPNSSSVIVYSSRAKCLIDFGKPV 615

Query: 734 DQNDEYVMISGQDSTVKNLWGTPIN-----GK---LKRKLRDCQTEGRPHGRKNFENFPF 793
           ++++EY + +G  S  K L G  +N     GK    KR+L + Q EG+ + RKNFE  P 
Sbjct: 616 EEDEEYDLPNGNLS--KTLEGKLVNLGLKKGKGTNRKRRLDEYQLEGKSNERKNFEILPS 675

Query: 794 RDPVLLIGHLSKTSLLIIEKPWLEVVNTFDAPPVHRHIYGT 822
             PVL +GHLSK S+L+IEKPW++VV + D  PV RHI+GT
Sbjct: 676 NHPVLFVGHLSKNSILVIEKPWMDVVKSLDNQPVDRHIFGT 702

[Close]
BLAST of Cp4.1LG06g02160 vs. TAIR 10
Match: AT4G34460.3 (GTP binding protein beta 1 )

HSP 1 Score: 44.7 bits (104), Expect = 4.3e-04
Identity = 37/143 (25.87%), Postives = 60/143 (41.96%), Query Frame = 0 

Query: 189 AEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRITAGLGGLG 248
           A +L+  R+L   +G+V S+ W+ +  RI S S DG +  WNA    + + I        
Sbjct: 52  ATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLP----- 111

Query: 249 SGSELCVWSLL--------FLRCGTLVSADSTGSVQFWDSNHGTLLQAHTL--HKGDVNA 308
                C W +          + CG L S  S  S+       GT+  +  L  H+G V+ 
Sbjct: 112 -----CAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSC 171

Query: 309 LAATPNHN-RVYSAGSDGQVILY 321
               PN +  + ++  D   IL+
Sbjct: 172 CQYVPNEDAHLITSSGDQTCILW 184

[Close]
BLAST of Cp4.1LG06g02160 vs. TAIR 10
Match: AT4G34460.1 (GTP binding protein beta 1 )

HSP 1 Score: 44.7 bits (104), Expect = 4.3e-04
Identity = 37/143 (25.87%), Postives = 60/143 (41.96%), Query Frame = 0 

Query: 189 AEELIYKRSLPRVSGRVLSVTWSNDAERIFSGSSDGFIRCWNASLGHEIYRITAGLGGLG 248
           A +L+  R+L   +G+V S+ W+ +  RI S S DG +  WNA    + + I        
Sbjct: 52  ATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLP----- 111

Query: 249 SGSELCVWSLL--------FLRCGTLVSADSTGSVQFWDSNHGTLLQAHTL--HKGDVNA 308
                C W +          + CG L S  S  S+       GT+  +  L  H+G V+ 
Sbjct: 112 -----CAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSC 171

Query: 309 LAATPNHN-RVYSAGSDGQVILY 321
               PN +  + ++  D   IL+
Sbjct: 172 CQYVPNEDAHLITSSGDQTCILW 184

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g02160 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RXU61.0e-30063.25WD repeat-containing protein PCN OS=Arabidopsis thaliana OX=3702 GN=PCN PE=2 SV=... [more]
Q969X69.1e-5224.97U3 small nucleolar RNA-associated protein 4 homolog OS=Homo sapiens OX=9606 GN=U... [more]
Q8R2N25.9e-5125.38U3 small nucleolar RNA-associated protein 4 homolog OS=Mus musculus OX=10090 GN=... [more]
O601615.7e-4622.70U3 small nucleolar RNA-associated protein 4 OS=Schizosaccharomyces pombe (strain... [more]
Q066791.6e-2421.44U3 small nucleolar RNA-associated protein 4 OS=Saccharomyces cerevisiae (strain ... [more]
BLAST of Cp4.1LG06g02160 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023535890.10.0100.00U3 small nucleolar RNA-associated protein 4 homolog isoform X1 [Cucurbita pepo s... [more]
XP_023535891.10.099.88U3 small nucleolar RNA-associated protein 4 homolog isoform X2 [Cucurbita pepo s... [more]
KAG6591430.10.099.03WD repeat-containing protein PCN, partial [Cucurbita argyrosperma subsp. sororia... [more]
KAG7024310.10.098.90U3 small nucleolar RNA-associated protein 4-like protein, partial [Cucurbita arg... [more]
XP_022936101.10.098.78U3 small nucleolar RNA-associated protein 4 homolog isoform X1 [Cucurbita moscha... [more]
BLAST of Cp4.1LG06g02160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F6K30.098.78U3 small nucleolar RNA-associated protein 4 homolog isoform X1 OS=Cucurbita mosc... [more]
A0A6J1F7H50.098.66U3 small nucleolar RNA-associated protein 4 homolog isoform X2 OS=Cucurbita mosc... [more]
A0A6J1FCB40.098.54U3 small nucleolar RNA-associated protein 4 homolog isoform X3 OS=Cucurbita mosc... [more]
A0A6J1IID90.098.05U3 small nucleolar RNA-associated protein 4 homolog isoform X1 OS=Cucurbita maxi... [more]
A0A6J1IH660.097.93U3 small nucleolar RNA-associated protein 4 homolog isoform X2 OS=Cucurbita maxi... [more]
BLAST of Cp4.1LG06g02160 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G07410.17.1e-30263.25Transducin family protein / WD-40 repeat family protein [more]
AT1G27470.18.2e-29061.70transducin family protein / WD-40 repeat family protein [more]
AT4G07410.21.6e-24861.77Transducin family protein / WD-40 repeat family protein [more]
AT4G34460.34.3e-0425.87GTP binding protein beta 1 [more]
AT4G34460.14.3e-0425.87GTP binding protein beta 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 537..572
e-value: 4.0
score: 13.2
coord: 49..95
e-value: 0.12
score: 21.5
coord: 282..321
e-value: 5.1E-4
score: 29.4
coord: 191..230
e-value: 6.6E-5
score: 32.3
coord: 98..185
e-value: 60.0
score: 5.8
coord: 241..279
e-value: 4.7
score: 12.8
coord: 3..42
e-value: 73.0
score: 5.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 205..230
e-value: 0.069
score: 14.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 198..239
score: 10.508451
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 289..330
score: 9.572741
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 5..143
e-value: 5.7E-9
score: 37.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 147..433
e-value: 1.7E-29
score: 104.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 480..774
e-value: 1.1E-13
score: 52.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..145
IPR044622WD repeat-containing protein PCNPANTHERPTHR45086WD REPEAT-CONTAINING PROTEIN PCNcoord: 1..821
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 11..328
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 252..745

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g02160.1Cp4.1LG06g02160.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035266 meristem growth
biological_process GO:0010073 meristem maintenance
molecular_function GO:0005515 protein binding