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Cp4.1LG06g02130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCTGCAACAACAGAACCCATTCGAGAGGCAGAGTGGCTTTCTCGTGGGAGAATAAGCCAGGGGAGTGCAAGGCAGCAGTGGCGCCGCCGTTTTACCGCCTGGGCGACGACGATCTGGGGCAAAAGCAGCTGCGGGCACCGCCGTGTACTTCGGCGAGAAAGGGCCAGAAGAAGGTGCAGAAAGATGGGGTCTTTGAAGACCCTTTTCTTGCGGCGTTCAGAGAGTGCACGAATGGAGAGTATGAGAAGAGTTGCAAGTTGAAGCAGAATAAAACTGGGTTTGGAGGGTGGATGAACTTGTTTGGTCATTTGTCTTGTAAGCACTTGACGGCGGTTCGAGATGACAGTTTGATTAGCTCCCCTGTTTCCAAACGAACCGTGTAG ATGACCTGCAACAACAGAACCCATTCGAGAGGCAGAGTGGCTTTCTCGTGGGAGAATAAGCCAGGGGAGTGCAAGGCAGCAGTGGCGCCGCCGTTTTACCGCCTGGGCGACGACGATCTGGGGCAAAAGCAGCTGCGGGCACCGCCGTGTACTTCGGCGAGAAAGGGCCAGAAGAAGGTGCAGAAAGATGGGGTCTTTGAAGACCCTTTTCTTGCGGCGTTCAGAGAGTGCACGAATGGAGAGTATGAGAAGAGTTGCAAGTTGAAGCAGAATAAAACTGGGTTTGGAGGGTGGATGAACTTGTTTGGTCATTTGTCTTGTAAGCACTTGACGGCGGTTCGAGATGACAGTTTGATTAGCTCCCCTGTTTCCAAACGAACCGTGTAG ATGACCTGCAACAACAGAACCCATTCGAGAGGCAGAGTGGCTTTCTCGTGGGAGAATAAGCCAGGGGAGTGCAAGGCAGCAGTGGCGCCGCCGTTTTACCGCCTGGGCGACGACGATCTGGGGCAAAAGCAGCTGCGGGCACCGCCGTGTACTTCGGCGAGAAAGGGCCAGAAGAAGGTGCAGAAAGATGGGGTCTTTGAAGACCCTTTTCTTGCGGCGTTCAGAGAGTGCACGAATGGAGAGTATGAGAAGAGTTGCAAGTTGAAGCAGAATAAAACTGGGTTTGGAGGGTGGATGAACTTGTTTGGTCATTTGTCTTGTAAGCACTTGACGGCGGTTCGAGATGACAGTTTGATTAGCTCCCCTGTTTCCAAACGAACCGTGTAG MTCNNRTHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKQLRAPPCTSARKGQKKVQKDGVFEDPFLAAFRECTNGEYEKSCKLKQNKTGFGGWMNLFGHLSCKHLTAVRDDSLISSPVSKRTV Homology
BLAST of Cp4.1LG06g02130 vs. NCBI nr
Match: KAA0064468.1 (hypothetical protein E6C27_scaffold255G001830 [Cucumis melo var. makuwa] >TYK20120.1 hypothetical protein E5676_scaffold134G002450 [Cucumis melo var. makuwa]) HSP 1 Score: 196 bits (498), Expect = 4.37e-62 Identity = 98/133 (73.68%), Postives = 110/133 (82.71%), Query Frame = 0
BLAST of Cp4.1LG06g02130 vs. NCBI nr
Match: KAG7024319.1 (hypothetical protein SDJN02_13133, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 195 bits (496), Expect = 1.43e-61 Identity = 88/95 (92.63%), Postives = 92/95 (96.84%), Query Frame = 0
BLAST of Cp4.1LG06g02130 vs. NCBI nr
Match: KAG6591440.1 (Pre-mRNA-processing protein 40A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 195 bits (496), Expect = 6.38e-55 Identity = 88/95 (92.63%), Postives = 92/95 (96.84%), Query Frame = 0
BLAST of Cp4.1LG06g02130 vs. NCBI nr
Match: KAE8649893.1 (hypothetical protein Csa_012691 [Cucumis sativus]) HSP 1 Score: 134 bits (336), Expect = 2.75e-37 Identity = 61/88 (69.32%), Postives = 70/88 (79.55%), Query Frame = 0
BLAST of Cp4.1LG06g02130 vs. NCBI nr
Match: CBI19366.3 (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 73.9 bits (180), Expect = 1.52e-13 Identity = 53/141 (37.59%), Postives = 71/141 (50.35%), Query Frame = 0
BLAST of Cp4.1LG06g02130 vs. ExPASy TrEMBL
Match: A0A0A0L2M9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644710 PE=4 SV=1) HSP 1 Score: 197 bits (500), Expect = 9.51e-63 Identity = 95/130 (73.08%), Postives = 107/130 (82.31%), Query Frame = 0
BLAST of Cp4.1LG06g02130 vs. ExPASy TrEMBL
Match: A0A5A7VA56 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002450 PE=4 SV=1) HSP 1 Score: 196 bits (498), Expect = 2.12e-62 Identity = 98/133 (73.68%), Postives = 110/133 (82.71%), Query Frame = 0
BLAST of Cp4.1LG06g02130 vs. ExPASy TrEMBL
Match: E0CNY8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g08660 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 7.38e-14 Identity = 53/141 (37.59%), Postives = 71/141 (50.35%), Query Frame = 0
BLAST of Cp4.1LG06g02130 vs. ExPASy TrEMBL
Match: M5XJQ6 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa021117mg PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.46e-13 Identity = 53/134 (39.55%), Postives = 65/134 (48.51%), Query Frame = 0
BLAST of Cp4.1LG06g02130 vs. ExPASy TrEMBL
Match: A0A251RBI7 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G419300 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.82e-13 Identity = 53/134 (39.55%), Postives = 65/134 (48.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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