Cp4.1LG06g01850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAACGCAAAGCAGACATTTACTCCTCCACAGCCTGTGTCCAATGCAGGTGATATGATCAACAAGCATTGACGATCACCTGATTCCTTTTATTGCTCCTCTGCTGATCCAATTAAATGCCATTCCATATTTCCTCTGTTCTTTTAAATCCCTCATGGACGACCTCCTTTGAACAGGGCGTGTGTTCTTTTGTTTCTTTTTCTGGGCACATTCTCGTTTTCAAGTTCTTGCCTTCTTCTTTCTGGGCCTGCTCTGCATTTCCACATTATTACATTATGAAGCTTTCTGGGTTTTGGGTTTTCTTTTTGGTCCTCCAAACAACTTTATTGCTGTCTTGCTTTCCCAGCCATTTAAATGCCTCCTCCAGCTCCGGTAATTTTGAAGTTAATGCTTGATTAATCACATTTTTCAGTTCTTAATTTTCCTATCTTTAACAATGTTGGTATGCGTGTATTCAAACTCGAAGTTACAGCATCATGTACATAGATACAGACTGAGTTGTAACTTCTGTAATTTTGCATGTTGCTTTTGCTGTGCTTTTCTTGAAGATATGGCTTTGAGCCACCACCATGTCAATCCAAACGAATGCTTGTATGACATACCCTTTAACAGGAAGCTGAAGGTACTACCCTTTTAAAGCCTTTAAATCCAACAACTCATTTTCATAATGCATCTCTGTTCTTGATTAATGAGATTGGTTACAACTTTTTTTGGTTCTCAGTTCCAGACTTATAAACATAACAGCCTGGGGAAAAAGAAGGTTAACCCAGGTGATCTTAAACTTGATGACTACCCTACCATTGACCCAGTTCCAAGCTCAAAGACATCAGTCAAACCCGGGCCAATAGAGCATGGGGCTCCTCTCCTTCCTCATATGCCAATTCCTCCTCCTCCTCCTGACCAGCCCGGCGATTATGCTTAGAGAGTAGACTGTTGTCTCCTCTGCTAGTTTGTCTTGAATAATCTAAGTTTGTTTCTCATGAAACCAAACCAACTATGTTATCCTGTCTGTTTTATATTGTGCAAAAGGTTGTCTTGAGTGATGTCCTGTTATGTATCCTTTAAATGATATCTGTTTTGGTATCTACTGAAACAAGACAGTGTGGTAGAATGATATACCAAGAGAACCAATGCATTTGATGATATGTCCTTTTCATCTGCTTCAAACTCCAGTTTCAGAAATTTTGAGGCATTATTA CAAACGCAAAGCAGACATTTACTCCTCCACAGCCTGTGTCCAATGCAGGTGATATGATCAACAAGCATTGACGATCACCTGATTCCTTTTATTGCTCCTCTGCTGATCCAATTAAATGCCATTCCATATTTCCTCTGTTCTTTTAAATCCCTCATGGACGACCTCCTTTGAACAGGGCGTGTGTTCTTTTGTTTCTTTTTCTGGGCACATTCTCGTTTTCAAGTTCTTGCCTTCTTCTTTCTGGGCCTGCTCTGCATTTCCACATTATTACATTATGAAGCTTTCTGGGTTTTGGGTTTTCTTTTTGGTCCTCCAAACAACTTTATTGCTGTCTTGCTTTCCCAGCCATTTAAATGCCTCCTCCAGCTCCGATATGGCTTTGAGCCACCACCATGTCAATCCAAACGAATGCTTGTATGACATACCCTTTAACAGGAAGCTGAAGTTCCAGACTTATAAACATAACAGCCTGGGGAAAAAGAAGGTTAACCCAGGTGATCTTAAACTTGATGACTACCCTACCATTGACCCAGTTCCAAGCTCAAAGACATCAGTCAAACCCGGGCCAATAGAGCATGGGGCTCCTCTCCTTCCTCATATGCCAATTCCTCCTCCTCCTCCTGACCAGCCCGGCGATTATGCTTAGAGAGTAGACTGTTGTCTCCTCTGCTAGTTTGTCTTGAATAATCTAAGTTTGTTTCTCATGAAACCAAACCAACTATGTTATCCTGTCTGTTTTATATTGTGCAAAAGGTTGTCTTGAGTGATGTCCTGTTATGTATCCTTTAAATGATATCTGTTTTGGTATCTACTGAAACAAGACAGTGTGGTAGAATGATATACCAAGAGAACCAATGCATTTGATGATATGTCCTTTTCATCTGCTTCAAACTCCAGTTTCAGAAATTTTGAGGCATTATTA ATGCCATTCCATATTTCCTCTGTTCTTTTAAATCCCTCATGGACGACCTCCTTTGAACAGGGCGTGTGTTCTTTTGTTTCTTTTTCTGGGCACATTCTCGTTTTCAAGTTCTTGCCTTCTTCTTTCTGGGCCTGCTCTGCATTTCCACATTATTACATTATGAAGCTTTCTGGGTTTTGGGTTTTCTTTTTGGTCCTCCAAACAACTTTATTGCTGTCTTGCTTTCCCAGCCATTTAAATGCCTCCTCCAGCTCCGATATGGCTTTGAGCCACCACCATGTCAATCCAAACGAATGCTTGTATGACATACCCTTTAACAGGAAGCTGAAGTTCCAGACTTATAAACATAACAGCCTGGGGAAAAAGAAGGTTAACCCAGGTGATCTTAAACTTGATGACTACCCTACCATTGACCCAGTTCCAAGCTCAAAGACATCAGTCAAACCCGGGCCAATAGAGCATGGGGCTCCTCTCCTTCCTCATATGCCAATTCCTCCTCCTCCTCCTGACCAGCCCGGCGATTATGCTTAG MPFHISSVLLNPSWTTSFEQGVCSFVSFSGHILVFKFLPSSFWACSAFPHYYIMKLSGFWVFFLVLQTTLLLSCFPSHLNASSSSDMALSHHHVNPNECLYDIPFNRKLKFQTYKHNSLGKKKVNPGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPPDQPGDYA Homology
BLAST of Cp4.1LG06g01850 vs. NCBI nr
Match: XP_022977124.1 (uncharacterized protein LOC111477287 [Cucurbita maxima]) HSP 1 Score: 331 bits (848), Expect = 5.61e-114 Identity = 164/176 (93.18%), Postives = 169/176 (96.02%), Query Frame = 0
BLAST of Cp4.1LG06g01850 vs. NCBI nr
Match: XP_022937047.1 (uncharacterized protein LOC111443464 [Cucurbita moschata]) HSP 1 Score: 329 bits (844), Expect = 2.29e-113 Identity = 164/176 (93.18%), Postives = 168/176 (95.45%), Query Frame = 0
BLAST of Cp4.1LG06g01850 vs. NCBI nr
Match: XP_023536374.1 (uncharacterized protein LOC111797561 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 254 bits (648), Expect = 2.93e-84 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of Cp4.1LG06g01850 vs. NCBI nr
Match: XP_038899330.1 (uncharacterized protein LOC120086661 [Benincasa hispida] >XP_038899331.1 uncharacterized protein LOC120086661 [Benincasa hispida] >XP_038899332.1 uncharacterized protein LOC120086661 [Benincasa hispida]) HSP 1 Score: 193 bits (490), Expect = 3.29e-60 Identity = 98/123 (79.67%), Postives = 108/123 (87.80%), Query Frame = 0
BLAST of Cp4.1LG06g01850 vs. NCBI nr
Match: XP_011654147.1 (uncharacterized protein LOC105435309 [Cucumis sativus]) HSP 1 Score: 186 bits (472), Expect = 1.80e-57 Identity = 96/123 (78.05%), Postives = 105/123 (85.37%), Query Frame = 0
BLAST of Cp4.1LG06g01850 vs. ExPASy TrEMBL
Match: A0A6J1IQK4 (uncharacterized protein LOC111477287 OS=Cucurbita maxima OX=3661 GN=LOC111477287 PE=4 SV=1) HSP 1 Score: 331 bits (848), Expect = 2.72e-114 Identity = 164/176 (93.18%), Postives = 169/176 (96.02%), Query Frame = 0
BLAST of Cp4.1LG06g01850 vs. ExPASy TrEMBL
Match: A0A6J1FA15 (uncharacterized protein LOC111443464 OS=Cucurbita moschata OX=3662 GN=LOC111443464 PE=4 SV=1) HSP 1 Score: 329 bits (844), Expect = 1.11e-113 Identity = 164/176 (93.18%), Postives = 168/176 (95.45%), Query Frame = 0
BLAST of Cp4.1LG06g01850 vs. ExPASy TrEMBL
Match: A0A0A0L2J3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642400 PE=4 SV=1) HSP 1 Score: 186 bits (472), Expect = 8.72e-58 Identity = 96/123 (78.05%), Postives = 105/123 (85.37%), Query Frame = 0
BLAST of Cp4.1LG06g01850 vs. ExPASy TrEMBL
Match: A0A1S3BV38 (uncharacterized protein LOC103493595 OS=Cucumis melo OX=3656 GN=LOC103493595 PE=4 SV=1) HSP 1 Score: 184 bits (467), Expect = 5.03e-57 Identity = 93/123 (75.61%), Postives = 105/123 (85.37%), Query Frame = 0
BLAST of Cp4.1LG06g01850 vs. ExPASy TrEMBL
Match: A0A6J1FLR4 (uncharacterized protein LOC111446569 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446569 PE=4 SV=1) HSP 1 Score: 167 bits (422), Expect = 1.12e-49 Identity = 96/159 (60.38%), Postives = 112/159 (70.44%), Query Frame = 0
BLAST of Cp4.1LG06g01850 vs. TAIR 10
Match: AT5G01075.1 (Glycosyl hydrolase family 35 protein ) HSP 1 Score: 50.1 bits (118), Expect = 2.2e-06 Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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