Cp4.1LG06g01590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTTTTTCCGTCCAAAAATGAATCCAAAGAGCGCCTACTCAGCGAAGGAACTAAAAGAGATCTTCCACCAAATGGATACGAATGAAGACGGCGGGTTGGGATTGTTCGAGATCAAGAACGCATTGAAGCAACTCGACGCTAAATTTCCAATCCATCTTGCCTACGAGGCTCTCTGTCACGCCGATCGGAACATAGATGGAAAGCTTGGCGAGGAGGAGATCGATGAATTTGTCAAGTACATGTTGAGTGAAGGCTATGTTGTATGA ATGTCGTTTTTCCGTCCAAAAATGAATCCAAAGAGCGCCTACTCAGCGAAGGAACTAAAAGAGATCTTCCACCAAATGGATACGAATGAAGACGGCGGGTTGGGATTGTTCGAGATCAAGAACGCATTGAAGCAACTCGACGCTAAATTTCCAATCCATCTTGCCTACGAGGCTCTCTGTCACGCCGATCGGAACATAGATGGAAAGCTTGGCGAGGAGGAGATCGATGAATTTGTCAAGTACATGTTGAGTGAAGGCTATGTTGTATGA ATGTCGTTTTTCCGTCCAAAAATGAATCCAAAGAGCGCCTACTCAGCGAAGGAACTAAAAGAGATCTTCCACCAAATGGATACGAATGAAGACGGCGGGTTGGGATTGTTCGAGATCAAGAACGCATTGAAGCAACTCGACGCTAAATTTCCAATCCATCTTGCCTACGAGGCTCTCTGTCACGCCGATCGGAACATAGATGGAAAGCTTGGCGAGGAGGAGATCGATGAATTTGTCAAGTACATGTTGAGTGAAGGCTATGTTGTATGA MSFFRPKMNPKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAKFPIHLAYEALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV Homology
BLAST of Cp4.1LG06g01590 vs. NCBI nr
Match: KAG7024250.1 (hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 176 bits (446), Expect = 1.87e-55 Identity = 84/89 (94.38%), Postives = 87/89 (97.75%), Query Frame = 0
BLAST of Cp4.1LG06g01590 vs. NCBI nr
Match: KGN55187.1 (hypothetical protein Csa_012728 [Cucumis sativus]) HSP 1 Score: 147 bits (370), Expect = 9.36e-44 Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of Cp4.1LG06g01590 vs. NCBI nr
Match: KAA0064378.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa] >TYK20209.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]) HSP 1 Score: 141 bits (355), Expect = 1.43e-41 Identity = 65/82 (79.27%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of Cp4.1LG06g01590 vs. NCBI nr
Match: KAG7037807.1 (hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 135 bits (340), Expect = 1.08e-38 Identity = 61/79 (77.22%), Postives = 74/79 (93.67%), Query Frame = 0
BLAST of Cp4.1LG06g01590 vs. NCBI nr
Match: KAG6608479.1 (hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 135 bits (340), Expect = 1.08e-38 Identity = 61/79 (77.22%), Postives = 74/79 (93.67%), Query Frame = 0
BLAST of Cp4.1LG06g01590 vs. ExPASy TrEMBL
Match: A0A0A0L3J7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639750 PE=4 SV=1) HSP 1 Score: 147 bits (370), Expect = 4.53e-44 Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of Cp4.1LG06g01590 vs. ExPASy TrEMBL
Match: A0A5D3D9N2 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003460 PE=4 SV=1) HSP 1 Score: 141 bits (355), Expect = 6.91e-42 Identity = 65/82 (79.27%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of Cp4.1LG06g01590 vs. ExPASy TrEMBL
Match: W9S022 (Putative calcium-binding protein CML10 OS=Morus notabilis OX=981085 GN=L484_000100 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.90e-13 Identity = 36/82 (43.90%), Postives = 48/82 (58.54%), Query Frame = 0
BLAST of Cp4.1LG06g01590 vs. ExPASy TrEMBL
Match: A0A6A1UYX3 (Putative calcium-binding protein CML10 OS=Morella rubra OX=262757 GN=CJ030_MR0G017070 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.20e-13 Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Cp4.1LG06g01590 vs. ExPASy TrEMBL
Match: A0A5N6RQD5 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018542 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 8.44e-13 Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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