Cp4.1LG06g00630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g00630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein SPA, chloroplastic
Location	Cp4.1LG06: 361536 .. 364914 (+)
RNA-Seq Expression	Cp4.1LG06g00630
Synteny	Cp4.1LG06g00630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGGATTTCACGTTTTGTGAAGCTGTAGTTGGCAATAAGTTCTTCTCTTTCTCCCACATGTGCCTCTAATTATATCTCTGTTGGTTGTTGCTTTGTCGTCACCTTCATTTTCTCTAGTCCGGACCACCACTATATTTTCGGCTTATAGAACTTGGGCCGTGAAATTCCTGACTAGGCGTTGGGGCTATATGGGCAGAGCAAGGAAGGCCCAAAGCAGTTTTATTTTTTTTCCTTTTCTTTTTGGATAGCAGATTATTCCAACTGGCAGGCTGTTGATGGTGGTGGGTCTGTAGCAGAACAGAGGCAGCCAATAAGGGATATCCAAATCCTGAAATGCGTGGTGAAGCTTTGTAGCTTTGAAACAAATCACAGCCTCAAGTATTTCTTCAGGAATTAGAACTGAGACCCTCTTTCTATCTCCCTGATTCGGAGCTGCTCTCAGAAGCAAAGCAATCGAATCCAAGGAATTCAGAAATGACAGTAGCACCTTCGCTTTCTCGCCTCCACTCCCCATTTCTGTATTGTCCTCTCAAGCCGACTTCTTCTGCCTCTCTATCCCTTACATTCTCCAGAAATCAACGATCGCCAGCATCATATCCACGCATCAGAGCTATAGATCTTGACCAAAATACGGTTCCTTCTTCGTCTACTCTCATGATTTTCCATTCAAATAGTATTCCATGCTTTTACTTGGTTGAAAAGGAAGTAAAAATGAAGATAGAAGTACCTTTTTGTCTCAGGTGGTGGCACTTTCAGTGGGGCTAGCGAGTTTGGCAGTTGGAATAGGCATTCCGGTCTTCTATGAAACCCAAATTGATAATGCTGTAAGCGTTACTCTCCTGTTCTTTAAATCCATGCCTAATAAACTGGGTTTTCTTTCATTTTCAGCTCATAATCCGTGTGTTTATGTTGTAGGCAAAGCGTGAAAATACTCAGCCCTGCTTTCCCTGCACTGGTTCGGGAGCACGTAAGTTAATTCACTGCCTCAAGAGTCCATCTTTTCATGAAATGATTTTAGGAAGTAGGTTTCCATCGTTCCAAATTGTATCCCAGGGAACTCTCATGTGTGCCTCCTCCCTGTTCTTGTCCTTCTCCAATAGTATGTCCTTTGGTCCTGCAACCAGAGTTACTTTTCATACAACTTAAACGCTACCAACAGGATAAGATTGTATAACTCAAAATTGTGAAGTAGTCGCATTTGATATAAAATTTATTCAAGTTGGCTAGCCTCACCTACTCAATACTCAATACAGGGTTGTTGAGAGGGAGTCCTACATTGGTTAATTTAAGGGACGATCATAGATTTATAAGTAAGGAATACATCTTCATTGGTATGAGAACTTTTGGGGGACCAAAAGTAAAACCACGAGAGATTATACTCAAGTGGACAATATCAAAACATTGTGGAGGATTGTGATTTCTAACATGGTAACAAAATCATGCCCTTAACTTAGCCATGTCAATAGAATCCTCAAATGTCGAACAAAGAAGTTGTGAGCCTCGAAGATGTAGTCAAAAAGTGACTCAAGTGTCGAACAAATTGTGTATTTTGTTTGAGAGCTCAAGAGATAGAAGTCAAGCCTCAATTAAGGGAAGGTTGTTCAAGGGCTCAAGAGATAGAAGTCAACCTCAATTAAGGGAAGGTTGTTCAAAGGCTCCATAGGCCTTAAGGGAGGCTCTATGGTGTACTTTGTTCGAAGGGAGGATTGTTGAGAGGGAATCCCACCTTGATTAATTAAGGGGATGATCATGAATTTATAAGTAAAGAAAACATCTCCATGAGAGCTTTTCAATTCCAAATTACGTCAACTTTAAACCCTTTAAAATGTAGTAAAGAAAATATGAAATGTGGTTATCAAGCAAGAAAGGAGCTCTTCCTAGGTCGAAATGCATATTCATATTTAGAAACAAGTGGATGGCAAGAGGGTTGTATTATGAACTTACAAAGCCTTGTTTGGAAATGAATAATTCATCGACAGAGAGATGCAGATTTTGCATGGGAACTGGCAATGTGACCGTAGAACTTGGTGGAGATGAAAAGGAAGTCTCCCGATGTATTAACTGTGATGGTGTTGGCACATTGACATGCACTACATGTCAGGGCTCAGGAATTCAACCTCGATACCTAGATCGCAGGTATGTTTTTCTTTTACGCATCTTTTGCTTCATTTTTCTTCCTCTGATGCTCGGAACTCACCTGAAAATCTAGCCGTCCAGACCATCAAAGAAGTTGACGAGTGTTTACATTTCCCTTTGAACAGAGAATTTAAAGATGATGATTGAAGCCCAGCAGAACCAAATCCAGCAACATCCGCTGATTTTGCTTTCAGTTTGATGGCTTTAAACTTGTTAGTTCCATTGAATCGAAGAGCTTGGTAACTTCCACCAAGCACTTCTTTTTGGTAACTGTTCGCGTGCATTCTTCTAATGTAGATCTGTGGTTAATAATACAAACAACGTTGTATGAAGAGAGAAGAAATAACTGTACTATCCCGAGTTTATGACTTCATTCCTCTATTGACTGTCAGTGAAATGGGGGATCAAACTCAATCTGATAATCACTAGCTAGTAATGGCAGCAGGTGCAGGTGCAGGTGAATCTGATCAATTCAATTATCAAATCAATCTTGCAATCATATCAGCCGATTGGAACTCAGAGAGTCGCTAATAAAAATCCACATAACTCCGTGGATTCATATCTCAGCCAAACATACAGGGGCAGAAATACTTTTACAAAGAGAGTCAAACATCCCGGTTAACATGAGGTAGTCTTACTTTTACAACACCTTTCTTCTAACCACCTCAAACGTTTCTGGTTCCCTTTAAGTGAAATGAATGTCTCCCTTAAATTTGGTTACTCAAAGAGATCCAAAGCAGCAAAATACAGCCGGTTATCAGTGCTTTCAATCTCATCCAGGCACCTATGCAATTAGTTGTACTGAATCTGTATTCAGAAGGCATTATTTCAGCTGTTCTCACTTCGGAAGATTCTAGCATGCCTCCCAACATACCTCAACACCGGTATCATATGAGTAGCACACGCTGAAGATACCAAAATTAATCAATCCCCGGAGTATTTATGGACTTCCGAGCTATCTTTGATCCAGATTCTCAAAGCAGAGGACTAGAGAATATTTAGCTAAATGAAATACCAAGTTAATCTAGATCATTGTCAGACTAAAATGTCGAACAGTTAGCTTCTATTTTCATATTGTGCATAATTGTAACAACTCAACCCCATTGCTAATAGATATTGTTCGTTTTGGCTCATTATATATCGTTATCAGACTCCAGATTTAAAGCTTTCATTATAAGGAATGCTTCGTTCCCCTCTCCAACTTCTTCAACCGACGTGGGGTCTTCCACATTTTTATAAGAA

mRNA sequence

CTTGGATTTCACGTTTTGTGAAGCTGTAGTTGGCAATAAGTTCTTCTCTTTCTCCCACATGTGCCTCTAATTATATCTCTGTTGGTTGTTGCTTTGTCGTCACCTTCATTTTCTCTAGTCCGGACCACCACTATATTTTCGGCTTATAGAACTTGGGCCGTGAAATTCCTGACTAGGCGTTGGGGCTATATGGGCAGAGCAAGGAAGGCCCAAAGCAGTTTTATTTTTTTTCCTTTTCTTTTTGGATAGCAGATTATTCCAACTGGCAGGCTGTTGATGGTGGTGGGTCTGTAGCAGAACAGAGGCAGCCAATAAGGGATATCCAAATCCTGAAATGCGTGGTGAAGCTTTGTAGCTTTGAAACAAATCACAGCCTCAAGTATTTCTTCAGGAATTAGAACTGAGACCCTCTTTCTATCTCCCTGATTCGGAGCTGCTCTCAGAAGCAAAGCAATCGAATCCAAGGAATTCAGAAATGACAGTAGCACCTTCGCTTTCTCGCCTCCACTCCCCATTTCTGTATTGTCCTCTCAAGCCGACTTCTTCTGCCTCTCTATCCCTTACATTCTCCAGAAATCAACGATCGCCAGCATCATATCCACGCATCAGAGCTATAGATCTTGACCAAAATACGGTGGTGGCACTTTCAGTGGGGCTAGCGAGTTTGGCAGTTGGAATAGGCATTCCGGTCTTCTATGAAACCCAAATTGATAATGCTGCAAAGCGTGAAAATACTCAGCCCTGCTTTCCCTGCACTGGTTCGGGAGCACAACTTGGTGGAGATGAAAAGGAAGTCTCCCGATGTATTAACTGTGATGGTGTTGGCACATTGACATGCACTACATGTCAGGGCTCAGGAATTCAACCTCGATACCTAGATCGCAGAGAATTTAAAGATGATGATTGAAGCCCAGCAGAACCAAATCCAGCAACATCCGCTGATTTTGCTTTCAGTTTGATGGCTTTAAACTTCAGGTGCAGGTGCAGGTGAATCTGATCAATTCAATTATCAAATCAATCTTGCAATCATATCAGCCGATTGGAACTCAGAGAGTCGCTAATAAAAATCCACATAACTCCGTGGATTCATATCTCAGCCAAACATACAGGGGCAGAAATACTTTTACAAAGAGAGTCAAACATCCCGGTTAACATGAGGTAGTCTTACTTTTACAACACCTTTCTTCTAACCACCTCAAACGTTTCTGGTTCCCTTTAAGTGAAATGAATGTCTCCCTTAAATTTGGTTACTCAAAGAGATCCAAAGCAGCAAAATACAGCCGGTTATCAGTGCTTTCAATCTCATCCAGGCACCTATGCAATTAGTTGTACTGAATCTGTATTCAGAAGGCATTATTTCAGCTGTTCTCACTTCGGAAGATTCTAGCATGCCTCCCAACATACCTCAACACCGGTATCATATGAGTAGCACACGCTGAAGATACCAAAATTAATCAATCCCCGGAGTATTTATGGACTTCCGAGCTATCTTTGATCCAGATTCTCAAAGCAGAGGACTAGAGAATATTTAGCTAAATGAAATACCAAGTTAATCTAGATCATTGTCAGACTAAAATGTCGAACAGTTAGCTTCTATTTTCATATTGTGCATAATTGTAACAACTCAACCCCATTGCTAATAGATATTGTTCGTTTTGGCTCATTATATATCGTTATCAGACTCCAGATTTAAAGCTTTCATTATAAGGAATGCTTCGTTCCCCTCTCCAACTTCTTCAACCGACGTGGGGTCTTCCACATTTTTATAAGAA

Coding sequence (CDS)

ATGACAGTAGCACCTTCGCTTTCTCGCCTCCACTCCCCATTTCTGTATTGTCCTCTCAAGCCGACTTCTTCTGCCTCTCTATCCCTTACATTCTCCAGAAATCAACGATCGCCAGCATCATATCCACGCATCAGAGCTATAGATCTTGACCAAAATACGGTGGTGGCACTTTCAGTGGGGCTAGCGAGTTTGGCAGTTGGAATAGGCATTCCGGTCTTCTATGAAACCCAAATTGATAATGCTGCAAAGCGTGAAAATACTCAGCCCTGCTTTCCCTGCACTGGTTCGGGAGCACAACTTGGTGGAGATGAAAAGGAAGTCTCCCGATGTATTAACTGTGATGGTGTTGGCACATTGACATGCACTACATGTCAGGGCTCAGGAATTCAACCTCGATACCTAGATCGCAGAGAATTTAAAGATGATGATTGA

Protein sequence

MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQLGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

Homology

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BLAST of Cp4.1LG06g00630 vs. ExPASy Swiss-Prot
Match: Q8GSJ6 (Protein disulfide-isomerase LQY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LQY1 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-52
Identity = 107/155 (69.03%), Postives = 122/155 (78.71%), Query Frame = 0


Query: 4   APSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPA-SYPRIRAIDLDQNTVVALSVGLA 63
           APS  RLHSPF++CP+  T S+      +RN RSP+ SYPRI+A +LD NTVVA+SVG+A
Sbjct: 5   APSPPRLHSPFIHCPINFTPSS----FSARNLRSPSTSYPRIKA-ELDPNTVVAISVGVA 64

Query: 64  SLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ--------------LGGDEKEVS 123
           S+A+GIGIPVFYETQIDNAAKRENTQPCFPC G+GAQ              LGG EKEVS
Sbjct: 65  SVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGEKEVS 124

Query: 124 RCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 144
            CINCDG G+LTCTTCQGSG+QPRYLDRREFKDDD
Sbjct: 125 NCINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154

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BLAST of Cp4.1LG06g00630 vs. ExPASy Swiss-Prot
Match: K4BVL1 (Protein SPA, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SPA PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-52
Identity = 107/159 (67.30%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MTVAPSLSRLHSPFLYCPLK-PT-SSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALS 60
           M  APSLSR  SPF+  PLK PT SS+  +  F +  R   SYP I+A+DLDQNTV+A++
Sbjct: 1   MLTAPSLSRFKSPFISSPLKLPTLSSSFFTQKFHQTCRRRNSYPCIKAVDLDQNTVIAIT 60

Query: 61  VGLASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ--------------LGGDE 120
           VG+ S+A+G+GIPVFYETQIDNAAKRENTQPCFPCTG+GAQ              LGG E
Sbjct: 61  VGVLSVAIGVGIPVFYETQIDNAAKRENTQPCFPCTGTGAQKCRFCMGTGSVTVELGGGE 120

Query: 121 KEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 144
            EVSRCINCDG G LTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 TEVSRCINCDGAGGLTCTTCQGSGIQPRYLDRREFKDDD 159

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BLAST of Cp4.1LG06g00630 vs. NCBI nr
Match: XP_022936404.1 (protein SPA, chloroplastic [Cucurbita moschata] >XP_022975871.1 protein SPA, chloroplastic [Cucurbita maxima] >XP_023535894.1 protein SPA, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6591276.1 Protein SPA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285 bits (729), Expect = 1.09e-96
Identity = 143/157 (91.08%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ--------------LGGDEKE 120
           LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ              LGGDEKE
Sbjct: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 143
           VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of Cp4.1LG06g00630 vs. NCBI nr
Match: KAG7024161.1 (Protein SPA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 277 bits (708), Expect = 3.22e-93
Identity = 142/175 (81.14%), Postives = 143/175 (81.71%), Query Frame = 0


Query: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGA---------------------- 120
           LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGA                      
Sbjct: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGARKLIHCFKSPSFHEMILGKRCR 120

Query: 121 ----------QLGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 143
                     +LGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 FCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 175

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BLAST of Cp4.1LG06g00630 vs. NCBI nr
Match: XP_038899789.1 (protein SPA, chloroplastic [Benincasa hispida])

HSP 1 Score: 274 bits (701), Expect = 2.03e-92
Identity = 135/157 (85.99%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MTVAPS+SRLHSPFLYCPLKPTSS SLS+TFSRNQRSPA+YPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSVSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPATYPRIRAIDLDQNTVVALSVG 60

Query: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ--------------LGGDEKE 120
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ              LGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 143
           VSRCINCDG GTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD 157

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BLAST of Cp4.1LG06g00630 vs. NCBI nr
Match: XP_008466492.1 (PREDICTED: protein SPA, chloroplastic [Cucumis melo])

HSP 1 Score: 273 bits (699), Expect = 4.10e-92
Identity = 136/157 (86.62%), Postives = 139/157 (88.54%), Query Frame = 0


Query: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MTVAPSLSRLHSPFLYCPLKPTSS SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVG 60

Query: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ--------------LGGDEKE 120
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ              LGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 143
           VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of Cp4.1LG06g00630 vs. NCBI nr
Match: XP_022142253.1 (protein SPA, chloroplastic [Momordica charantia])

HSP 1 Score: 273 bits (697), Expect = 8.28e-92
Identity = 136/157 (86.62%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MT APSLSRLHSPFLY PLKPTS+ASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ--------------LGGDEKE 120
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ              LGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 143
           VSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of Cp4.1LG06g00630 vs. ExPASy TrEMBL
Match: A0A6J1IFD3 (protein SPA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476444 PE=4 SV=1)

HSP 1 Score: 285 bits (729), Expect = 5.29e-97
Identity = 143/157 (91.08%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ--------------LGGDEKE 120
           LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ              LGGDEKE
Sbjct: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 143
           VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of Cp4.1LG06g00630 vs. ExPASy TrEMBL
Match: A0A6J1F877 (protein SPA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443033 PE=4 SV=1)

HSP 1 Score: 285 bits (729), Expect = 5.29e-97
Identity = 143/157 (91.08%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ--------------LGGDEKE 120
           LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ              LGGDEKE
Sbjct: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 143
           VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of Cp4.1LG06g00630 vs. ExPASy TrEMBL
Match: A0A1S3CRE4 (protein SPA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503884 PE=4 SV=1)

HSP 1 Score: 273 bits (699), Expect = 1.99e-92
Identity = 136/157 (86.62%), Postives = 139/157 (88.54%), Query Frame = 0


Query: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MTVAPSLSRLHSPFLYCPLKPTSS SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVG 60

Query: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ--------------LGGDEKE 120
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ              LGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 143
           VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of Cp4.1LG06g00630 vs. ExPASy TrEMBL
Match: A0A6J1CMU6 (protein SPA, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012411 PE=4 SV=1)

HSP 1 Score: 273 bits (697), Expect = 4.01e-92
Identity = 136/157 (86.62%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MT APSLSRLHSPFLY PLKPTS+ASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ--------------LGGDEKE 120
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ              LGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 143
           VSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of Cp4.1LG06g00630 vs. ExPASy TrEMBL
Match: A0A0A0LJ55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872080 PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 4.68e-91
Identity = 133/157 (84.71%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MTVAPSLSRLHSPFLYCPLKPT S SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTPSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVG 60

Query: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ--------------LGGDEKE 120
           L S+A+GIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ              LGGD+KE
Sbjct: 61  LVSVAIGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDDKE 120

Query: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 143
           VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

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BLAST of Cp4.1LG06g00630 vs. TAIR 10
Match: AT1G75690.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 206.8 bits (525), Expect = 1.1e-53
Identity = 107/155 (69.03%), Postives = 122/155 (78.71%), Query Frame = 0


Query: 4   APSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPA-SYPRIRAIDLDQNTVVALSVGLA 63
           APS  RLHSPF++CP+  T S+      +RN RSP+ SYPRI+A +LD NTVVA+SVG+A
Sbjct: 5   APSPPRLHSPFIHCPINFTPSS----FSARNLRSPSTSYPRIKA-ELDPNTVVAISVGVA 64

Query: 64  SLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQ--------------LGGDEKEVS 123
           S+A+GIGIPVFYETQIDNAAKRENTQPCFPC G+GAQ              LGG EKEVS
Sbjct: 65  SVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGEKEVS 124

Query: 124 RCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 144
            CINCDG G+LTCTTCQGSG+QPRYLDRREFKDDD
Sbjct: 125 NCINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g00630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GSJ6	1.6e-52	69.03	Protein disulfide-isomerase LQY1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
K4BVL1	1.6e-52	67.30	Protein SPA, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SPA PE=2 SV=1	[more]

BLAST of Cp4.1LG06g00630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936404.1	1.09e-96	91.08	protein SPA, chloroplastic [Cucurbita moschata] >XP_022975871.1 protein SPA, chl...	[more]
KAG7024161.1	3.22e-93	81.14	Protein SPA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038899789.1	2.03e-92	85.99	protein SPA, chloroplastic [Benincasa hispida]	[more]
XP_008466492.1	4.10e-92	86.62	PREDICTED: protein SPA, chloroplastic [Cucumis melo]	[more]
XP_022142253.1	8.28e-92	86.62	protein SPA, chloroplastic [Momordica charantia]	[more]

BLAST of Cp4.1LG06g00630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IFD3	5.29e-97	91.08	protein SPA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476444 PE=4 SV=1	[more]
A0A6J1F877	5.29e-97	91.08	protein SPA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443033 PE=4 SV...	[more]
A0A1S3CRE4	1.99e-92	86.62	protein SPA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503884 PE=4 SV=1	[more]
A0A6J1CMU6	4.01e-92	86.62	protein SPA, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012411 PE=4 S...	[more]
A0A0A0LJ55	4.68e-91	84.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872080 PE=4 SV=1	[more]

BLAST of Cp4.1LG06g00630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75690.1	1.1e-53	69.03	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 4..142
None	No IPR available	PANTHER	PTHR15852:SF27	PROTEIN DISULFIDE-ISOMERASE LQY1, CHLOROPLASTIC	coord: 4..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g00630.1	Cp4.1LG06g00630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010206	photosystem II repair
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003756	protein disulfide isomerase activity