Cp4.1LG06g00220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCCATGTCATCACTCCAGTTGGCTCATCAACATACGTGTCCTTTTTTCAACTGAAACCGTCTTTTAAACGATGAATGGATCAATTATTTTATTTGACTTTCTAATCAGCTTTGCATGTGATGTGGATCAGACTTGTACAGTTCTCCGTCAGGTAAGATTTAACGACCGTCGTTAAAGTGAAGACGTTGACCTGATCCAAAACTAAAGTCAACACGATAACCCACGATCAGAACCGGTCGGAAAGTGTCAGTTTCGTAAATAGCAGTGATGATGAAGGGCAGTGGCAGGAACTAGACGACCGGCCACCGACCGGAACTTTTATATGCGGGCGAAGGGAATGAAGAATTCAGAGGGAAGAGAGCGAGTTGTGACGATTGCCCACAACCATAAATGCAAAGAAATGAAGACCCACCATCCCCCCAGATTCAAACCCTAAATAAAAAATGCTATCTTTAAGCCTATTTTCAACTTGAATTTTCTTTCCCTCTTACTTCGCCGGAATCTGAACTCAATCGCCGGCGATGGCCCTCGCCCTCGCCCTCCGGCCAACCCATTCTTTGTTTTTATTTGCTTTCTCATTTTTGCCCTTTAGATCTATCTCTGTTTGAAAGATCAGGATCGGCAGTGGCAATACTTCTTATCGAATTTCCCTATTTATTTGCTTTTTTTGGCTGGGTTCTGAGATTATGTAGCCTACATTCTTTATTTTATTAATTTTTTCCCTAAAATATCCTCCTCCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAACGATTCTTCTCGTGCCCGACCCTAGGGTTAGTCTTCGAATCTTCCTGTTTCGGAGGGGGAGGCTCATATAGGTTTGAATTGGGAATTGGGGATATCGTTGGTTTGAGTTATTTTGGAGATATGAGCTGGTTTTCTTGCATTCGTCCCCGTCGTAAAGACGCCGGCAAGGTCGAAATCGACAACGGTATGGTAATTGTTCCAATTTACGCGCTCTCTCTCTCTCTTTCTTACATTATTTTGAGGTCAGATTTCAAAGAATCTTCGATGTTTTGGGATCTGTAAACTTGCAAAAATTTCGCAGGGAGTCGGAGGGGGAACTCCTATTCAAATGGTAAATCGCTACTCCTACTGCCTCATTCTTTTTACTGAAGGCCTTTTGATTTTCATCTTATGGTTCTTAAATTTGTGCTCAGACATTGGAAAGGGGAAGGAATCACAACCCAGCAATGGAAACAACCGGAAATGTGGGGCTGCACGAAGCTTCCCATTTCGCGAGTTAGCCATGGCCACGAGAGGCTTCAAGGAAGTTAACTTGATTGGTGAAGGCGGTTTTGGAAGAGTTTACAAAGGACGATTAGGAACAGGCCAGGTTGTTCTTGCTGCTTCATTTTTTTATCACCTACATTCCTGAAAAACACAATGTGCTTTTACTTCAATCTGATATTTATGCAATTGTTATCTGCTTGCTCGAGCAGCTCGTTGCGATTAAACAACTCGACCGTAAAGGTCTTCAGGGATATCAGGAATTCATCGTAGAAGTTCTCATGTTAAGTTTATTAGATGATAGTAATCTTGTCACCTTGATTGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTCTACGAGTATATGTCGATGGGAAGCTTGGAAAACCATCTTTTTGGTATGTCTATCAATCTCTACCCTAAAGAATAACTTAGAGATAATTTCGACCTACATCGGTTGTAATGCTGGTTCTTTTCTTCTTGGTTCTGTATTTTGTTTTCAGGCTTGTCCCCCGAACGACCACCATTGAGTTGGAACACTCGAATCAAGATTGCTCTTGGTGCAGCCCAGGGGCTTGAGTATCTTCACTGCACAGCCAATCCACCAGTCATCTACCGTGACTTGAAATCTGCAAATATTTTGCTGGATGATGACTTCAATCCAAAGCTCTCAGATTTCGGCCTCGCGAAGTTAGGACCGGTTGGTGACAACACTCATGTTTCCACCAGAGTAATGGGAACACAGGGTTATTGTGCTCCGGAGTATGCCATGAGTGGCAAACTCACCCTTAAGTCTGATATTTATTGCTTTGGTGTAGTTCTGTTGGAGATAATTACAGGTAGGAAAGCTATAGACTCCACCAAGAAACCAGGAGAGCAAAATCTGGTTGTTTGGGTAAGTTCTCATTTCCTGTGGCTGAGCTCTGCTTGTTGTTTTAGATGACATATTATACAAACTGCCCCTAACAACGACTTCTCCCCCGTCCCTCGTTTCAGTCTCGCCCTTTCCTAAAAGACCGGAGGAAGTTCATTCAATTGATCGACCCGCTGCTCGAAGGTCGCTACCATCTTCGTTGTGTACATCATGCAATTGCAATTGCTGCAATGTGTCTCCAGGAGCAGCCAACGTTCCGGCCAATTGTCAGTGATATCGTTGTTGCCCTTGAGTACTTGGCTTCTCAGAGTTGCGGATCAGAACAACCGAGGGACGAGGTGCCTAGTCCCTCCAAACCATCTCCTCAAAAGGACAGGCGTTCCCCTGTTCAAGCATCGAGATGTGGAAAGAATTCAAGATTCATGTAAGGGTGGTTGCTGTACAAGTCTTCGTATGGCTGTGGAAGGTATCAAATCAATTATCTCAAATTGTTTTTCCTCGATTGAAGTAATCATTCATCACACAAATAGAAACGGACCGCTTCTCTTTTAGCAAAGCTTGTAGAGAGCCCGAGCATTAAGCTAGTAGATAGCCTCCTTTTTGGGCTTTTCTTGTCCAGACTTTCCTTCAAGGTTTTAAAACGCATTTGCTCTGGAGAGGTTTCCACACCCTTATAAGGAATGTCGGTTGGGATCTCACAATCATCTCCTTGGGGGTCCAACATCCTCGCTGGACACCACTAGTCTCTAGCTTTGATACCATTTGTAACAGCTCAAGCCCACTGCTAGAAGATATTGTCCATTTTGGCCCGTTATGTATCGCCGTCAGCCTCACGGTTTTAAAACTATACTTTTATAAATGATATTAGTGTCAGACACCAAACAATGTGCCAGTAAGGACGTTGGGCCCTAACGGGGTGGATTGTGAGATCCCACGTCGGGTGGAGAGGAGAACAAAACATTCCTATGTGAAAACTTCTCCCTAACAAACGCGTTTTAAAATCGTAAGGCTAACGGCGATATGTAACAGGCCAAAGCAAACAATGTCGGCTAATTGTGAGCTTGAGTTGTTACAACGACTGTTTGCATCGATTTAAGTATTTAACCAGAAATATAAAGCAAAACTCCAGGCAAAAGGGAAACGTGAAGAAATAGTAGCTAGCTCTTTGCCCGTCCACATCAATACCATGTGGAAATCCCAAGGGGGAGTCCATGTTGGCAAGAGCTTGGAGTCTCTTGGTCATATCGGCTTAGACCTAAGGTTCCAAGGTCGAACCTTCGAGTGAGCTTAATACTAAAAATCCTTGATATCTCTGGGGTCTAGGCCCAATGTTGGTTTCCTTGTGCATAGGAGAGCAAAGCTCCAACCCCCACTTAAACTCAGGAAGAACAGTTCTCTGTTCAGTTATATACTTGGTATGAACACATTATTTCCTTTCACTCTTCTCATATATAGCTTTTTTGTTCTTTGTTCGTTTGAATCTGAATAGGAATTGAGTTGCTGGGTTCCATTCATGTATTTGGTTGCAGATGCATTTGCAGTTTCTGGCGTTAGCAAAACCCGGCCAACTCCAAATATGCAAGCAATCCACATGCATTTTTGAGTGCCAATATCTCCCCTCCGATGGCCGTTGCACATATTTCAGGTAATACAGATTCTTGCCTGCAATACGGACTACATCAACTAGTCTCATACATGGGATTCATCTTTTCTGATTTCCATCATTCTCAGTTCATTAATATATATATATATATATATATATATATATATATTTCTTTACTATGGGCTTGTCAAGTGCAGTGAAGCCAGCCCATATGATGATGATGATCCACATAATTTATATATGTATATAATGTAATCAACTGATAATAAACTTGGTGAAAGGAAGTGATTGACATTTGACTAACTCAACTCTAGAGGTTTGACTTTGACT ACCCATGTCATCACTCCAGTTGGCTCATCAACATACGTGTCCTTTTTTCAACTGAAACCGTCTTTTAAACGATGAATGGATCAATTATTTTATTTGACTTTCTAATCAGCTTTGCATGTGATGTGGATCAGACTTGTACAGTTCTCCGTCAGGTAAGATTTAACGACCGTCGTTAAAGTGAAGACGTTGACCTGATCCAAAACTAAAGTCAACACGATAACCCACGATCAGAACCGGTCGGAAAGTGTCAGTTTCGTAAATAGCAGTGATGATGAAGGGCAGTGGCAGGAACTAGACGACCGGCCACCGACCGGAACTTTTATATGCGGGCGAAGGGAATGAAGAATTCAGAGGGAAGAGAGCGAGTTGTGACGATTGCCCACAACCATAAATGCAAAGAAATGAAGACCCACCATCCCCCCAGATTCAAACCCTAAATAAAAAATGCTATCTTTAAGCCTATTTTCAACTTGAATTTTCTTTCCCTCTTACTTCGCCGGAATCTGAACTCAATCGCCGGCGATGGCCCTCGCCCTCGCCCTCCGGCCAACCCATTCTTTGTTTTTATTTGCTTTCTCATTTTTGCCCTTTAGATCTATCTCTGTTTGAAAGATCAGGATCGGCAGTGGCAATACTTCTTATCGAATTTCCCTATTTATTTGCTTTTTTTGGCTGGGTTCTGAGATTATGTAGCCTACATTCTTTATTTTATTAATTTTTTCCCTAAAATATCCTCCTCCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAACGATTCTTCTCGTGCCCGACCCTAGGGTTAGTCTTCGAATCTTCCTGTTTCGGAGGGGGAGGCTCATATAGGTTTGAATTGGGAATTGGGGATATCGTTGGTTTGAGTTATTTTGGAGATATGAGCTGGTTTTCTTGCATTCGTCCCCGTCGTAAAGACGCCGGCAAGGTCGAAATCGACAACGGGAGTCGGAGGGGGAACTCCTATTCAAATGACATTGGAAAGGGGAAGGAATCACAACCCAGCAATGGAAACAACCGGAAATGTGGGGCTGCACGAAGCTTCCCATTTCGCGAGTTAGCCATGGCCACGAGAGGCTTCAAGGAAGTTAACTTGATTGGTGAAGGCGGTTTTGGAAGAGTTTACAAAGGACGATTAGGAACAGGCCAGTCTCGCCCTTTCCTAAAAGACCGGAGGAAGTTCATTCAATTGATCGACCCGCTGCTCGAAGGTCGCTACCATCTTCGTTGTGTACATCATGCAATTGCAATTGCTGCAATGTGTCTCCAGGAGCAGCCAACGTTCCGGCCAATTGTCAGTGATATCGTTGTTGCCCTTGAGTACTTGGCTTCTCAGAGTTGCGGATCAGAACAACCGAGGGACGAGGTGCCTAGTCCCTCCAAACCATCTCCTCAAAAGGACAGGCGTTCCCCTGTTCAAGCATCGAGATGTGGAAAGAATTCAAGATTCATGTAAGGGTGGTTGCTGTACAAGTCTTCGTATGGCTGTGGAAGATGCATTTGCAGTTTCTGGCGTTAGCAAAACCCGGCCAACTCCAAATATGCAAGCAATCCACATGCATTTTTGAGTGCCAATATCTCCCCTCCGATGGCCGTTGCACATATTTCAGGTAATACAGATTCTTGCCTGCAATACGGACTACATCAACTAGTCTCATACATGGGATTCATCTTTTCTGATTTCCATCATTCTCAGTTCATTAATATATATATATATATATATATATATATATATATTTCTTTACTATGGGCTTGTCAAGTGCAGTGAAGCCAGCCCATATGATGATGATGATCCACATAATTTATATATGTATATAATGTAATCAACTGATAATAAACTTGGTGAAAGGAAGTGATTGACATTTGACTAACTCAACTCTAGAGGTTTGACTTTGACT ATGAGCTGGTTTTCTTGCATTCGTCCCCGTCGTAAAGACGCCGGCAAGGTCGAAATCGACAACGGGAGTCGGAGGGGGAACTCCTATTCAAATGACATTGGAAAGGGGAAGGAATCACAACCCAGCAATGGAAACAACCGGAAATGTGGGGCTGCACGAAGCTTCCCATTTCGCGAGTTAGCCATGGCCACGAGAGGCTTCAAGGAAGTTAACTTGATTGGTGAAGGCGGTTTTGGAAGAGTTTACAAAGGACGATTAGGAACAGGCCAGTCTCGCCCTTTCCTAAAAGACCGGAGGAAGTTCATTCAATTGATCGACCCGCTGCTCGAAGGTCGCTACCATCTTCGTTGTGTACATCATGCAATTGCAATTGCTGCAATGTGTCTCCAGGAGCAGCCAACGTTCCGGCCAATTGTCAGTGATATCGTTGTTGCCCTTGAGTACTTGGCTTCTCAGAGTTGCGGATCAGAACAACCGAGGGACGAGGTGCCTAGTCCCTCCAAACCATCTCCTCAAAAGGACAGGCGTTCCCCTGTTCAAGCATCGAGATGTGGAAAGAATTCAAGATTCATGTAA MSWFSCIRPRRKDAGKVEIDNGSRRGNSYSNDIGKGKESQPSNGNNRKCGAARSFPFRELAMATRGFKEVNLIGEGGFGRVYKGRLGTGQSRPFLKDRRKFIQLIDPLLEGRYHLRCVHHAIAIAAMCLQEQPTFRPIVSDIVVALEYLASQSCGSEQPRDEVPSPSKPSPQKDRRSPVQASRCGKNSRFM Homology
BLAST of Cp4.1LG06g00220 vs. ExPASy Swiss-Prot
Match: Q9LDZ5 (Probable serine/threonine-protein kinase PBL21 OS=Arabidopsis thaliana OX=3702 GN=PBL21 PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.4e-16 Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 0
HSP 2 Score: 79.7 bits (195), Expect = 3.9e-14 Identity = 50/104 (48.08%), Postives = 61/104 (58.65%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. ExPASy Swiss-Prot
Match: Q9LQQ8 (Probable serine/threonine-protein kinase PBL5 OS=Arabidopsis thaliana OX=3702 GN=PBL5 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 4.2e-16 Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = 0
HSP 2 Score: 44.3 bits (103), Expect = 1.8e-03 Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. ExPASy Swiss-Prot
Match: Q0WRY5 (Probable serine/threonine-protein kinase PBL7 OS=Arabidopsis thaliana OX=3702 GN=PBL7 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.1e-15 Identity = 36/62 (58.06%), Postives = 50/62 (80.65%), Query Frame = 0
HSP 2 Score: 50.4 bits (119), Expect = 2.5e-05 Identity = 35/102 (34.31%), Postives = 50/102 (49.02%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. ExPASy Swiss-Prot
Match: Q6I5Q6 (Receptor-like cytoplasmic kinase 185 OS=Oryza sativa subsp. japonica OX=39947 GN=RLCK185 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.3e-14 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 0
HSP 2 Score: 54.7 bits (130), Expect = 1.3e-06 Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. ExPASy Swiss-Prot
Match: Q9SIB6 (Probable serine/threonine-protein kinase PBL6 OS=Arabidopsis thaliana OX=3702 GN=PBL6 PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 5.1e-14 Identity = 33/61 (54.10%), Postives = 51/61 (83.61%), Query Frame = 0
HSP 2 Score: 42.7 bits (99), Expect = 5.3e-03 Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. NCBI nr
Match: XP_023536293.1 (probable serine/threonine-protein kinase PBL21 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 306 bits (783), Expect = 9.38e-101 Identity = 191/385 (49.61%), Postives = 191/385 (49.61%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. NCBI nr
Match: XP_022936916.1 (probable serine/threonine-protein kinase PBL21 isoform X1 [Cucurbita moschata]) HSP 1 Score: 297 bits (760), Expect = 2.86e-97 Identity = 188/385 (48.83%), Postives = 189/385 (49.09%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. NCBI nr
Match: XP_022975784.1 (probable serine/threonine-protein kinase PBL21 isoform X1 [Cucurbita maxima] >XP_022975785.1 probable serine/threonine-protein kinase PBL21 isoform X1 [Cucurbita maxima]) HSP 1 Score: 293 bits (749), Expect = 1.32e-95 Identity = 187/385 (48.57%), Postives = 187/385 (48.57%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. NCBI nr
Match: KAG6591218.1 (putative serine/threonine-protein kinase PBL21, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 271 bits (694), Expect = 7.43e-88 Identity = 174/352 (49.43%), Postives = 175/352 (49.72%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. NCBI nr
Match: KAG7024104.1 (putative serine/threonine-protein kinase PBL21 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 261 bits (666), Expect = 3.52e-83 Identity = 175/385 (45.45%), Postives = 176/385 (45.71%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. ExPASy TrEMBL
Match: A0A6J1F8T1 (probable serine/threonine-protein kinase PBL21 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443360 PE=3 SV=1) HSP 1 Score: 297 bits (760), Expect = 1.39e-97 Identity = 188/385 (48.83%), Postives = 189/385 (49.09%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. ExPASy TrEMBL
Match: A0A6J1ILK5 (probable serine/threonine-protein kinase PBL21 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476379 PE=3 SV=1) HSP 1 Score: 293 bits (749), Expect = 6.42e-96 Identity = 187/385 (48.57%), Postives = 187/385 (48.57%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. ExPASy TrEMBL
Match: A0A0A0L3D1 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G663630 PE=3 SV=1) HSP 1 Score: 222 bits (566), Expect = 2.73e-68 Identity = 156/382 (40.84%), Postives = 165/382 (43.19%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. ExPASy TrEMBL
Match: A0A1S4E002 (serine/threonine-protein kinase CDL1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493817 PE=3 SV=1) HSP 1 Score: 221 bits (564), Expect = 5.45e-68 Identity = 156/382 (40.84%), Postives = 164/382 (42.93%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. ExPASy TrEMBL
Match: A0A5A7VBM8 (Serine/threonine-protein kinase CDL1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00610 PE=4 SV=1) HSP 1 Score: 216 bits (551), Expect = 6.95e-66 Identity = 156/395 (39.49%), Postives = 164/395 (41.52%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. TAIR 10
Match: AT1G20650.1 (Protein kinase superfamily protein ) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17 Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 0
HSP 2 Score: 79.7 bits (195), Expect = 2.8e-15 Identity = 50/104 (48.08%), Postives = 61/104 (58.65%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. TAIR 10
Match: AT1G07870.1 (Protein kinase superfamily protein ) HSP 1 Score: 86.3 bits (212), Expect = 3.0e-17 Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = 0
HSP 2 Score: 44.3 bits (103), Expect = 1.3e-04 Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. TAIR 10
Match: AT1G07870.2 (Protein kinase superfamily protein ) HSP 1 Score: 86.3 bits (212), Expect = 3.0e-17 Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = 0
HSP 2 Score: 44.3 bits (103), Expect = 1.3e-04 Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. TAIR 10
Match: AT5G02800.1 (Protein kinase superfamily protein ) HSP 1 Score: 84.0 bits (206), Expect = 1.5e-16 Identity = 36/62 (58.06%), Postives = 50/62 (80.65%), Query Frame = 0
HSP 2 Score: 50.4 bits (119), Expect = 1.8e-06 Identity = 35/102 (34.31%), Postives = 50/102 (49.02%), Query Frame = 0
BLAST of Cp4.1LG06g00220 vs. TAIR 10
Match: AT2G28590.1 (Protein kinase superfamily protein ) HSP 1 Score: 79.3 bits (194), Expect = 3.6e-15 Identity = 33/61 (54.10%), Postives = 51/61 (83.61%), Query Frame = 0
HSP 2 Score: 42.7 bits (99), Expect = 3.8e-04 Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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