Cp4.1LG05g15540 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTAATTAACGTTTTTCCAATATATTACTTGGGACTAAAAAAACAAAGACCATAAATTATTTTATTTATTATTATTTTTAGATTTGATAATGGCGTGGCATGTGTGTTTTGGGTTTGGGTTCTAGAAGATAAGAAGTCACCGAATTGGTTATATATATCTCTCATTCTTCCCCCTCTGTGCTCACCCATTCCTGAACCCAGCCGCCGCTCGCTCATCGGAGTTAGATCAGATCCGGCAACACGCCCACCCACACGAACAGAGCGGAGAAGCAGTTCCAAAGCACCAATCCGATAGCAAATGACCGTAGCTGGGCTCGAGTTACCTCCAGGCTTCAGATTTCACCCTACTGATGAGGAGCTAGTCCTTCACTACCTCTGCAGAAAGTGCTCCTCTCAGCCCATCGCCGTCCCCATTATCAAGGAGATCGATCTTTACAAATACGACCCCTGGCACCTTCCTGGTATCTTTTTCTTCTTCAATTTCTCCCTTTATTTTCCTCTTCTTCTCTTTTCTTCCCTTTTTCAATTTTCGTTTTGCGTTTTCATTCTCCAGAATTGGCTGTCTGTGGTGAAAAGGAGTGGTATTTCTTCTCCCCAAGGGACCGCAAGTACCCCAACGGCTCCCGCCCCAACCGTGCTGCCGGTACCGGCTACTGGAAGGCTACCGGCGCTGACAAGCCCATCGGCCGCCCCAAACCTCTTGGCATCAAGAAGGCACTCGTTTTCTACGCCGGCAAGGCCCCAACCGGCGTCAAGACCAATTGGATTATGCACGAGTATCGCCTCGCCAACGTTGACCGATCCGCTACCAAGAAACCCCACAACTTGAGGGTAACTAACTCTTCACCCCATCTCTGTTTCCGGTTTGAAATTTGAATTTGGTTGTTGATGGCTCCTGTGGGTTCATTAATTTTTGCAGTTGGATGACTGGGTGCTGTGTCGTATCTACAACAAGAAGGGATGCATAGAAAAGCATTACCAATCCACCGACGACAAGGCATCCGAATTCCCAGACTTCGAGGAAGAGAAGCCCATTATTACGATGCCTAGCACCACCAACATGCTACACCTCCCAATCCATAACAACCAATTGCATATGGACACTTCGGATTCGGTGCCCATAATGCATACCGACGACTCCAGTGGCTCCGATCCGGTGACATCGCCGGAGGTCACGTGGGATAAGGAGGTCCAAAGTGAACCCAAGTGGGGTGGAGGAGCACCAGACTTTGACTTTTTCCAGTTCAATTACATGGATTCTTTCTCCATGACTGAGGACGATCCATTTGGAAGTCAGGTTCCGTTCCAGATGGACCATCTGCCGCCATTTCAGGATATGTTTTCGTGTTTACAGAGGCAGATTTAACCACACCACCACCGCCGCCGCCGCCGTAAGGGCATGGACTAAGGGGTTGCATTCAACCCCATTGCCAGGCTTCCGCTTTCTACTATATATAACATAATATCCATATTTTTAGCAGATTCTTTGATGAACCCAAAACCAATATGCCCAAAAGTATTGTGATGTCTCCTTTTTTTTGCTGGAATGAAGAATTTAGTTAGAAGAGAATTGACCGACCTCTGCTTCTAGAGTTGACGACCTTCATCATCCTTATTCGAGCCCCTCTCATTCAAGCCTCGTATAATCCCAAGGCTGCCTGCAACTGCGACAAACCAAATGATGCTGCTGCACCAGACATGAATGAAATCAGATTGATTTTTGTAATTCCAAAAGCAGAATTAATAAATAATGTCAGTTCCAATTCTATTACTGCACTTGGTAAATCAATCCAAGTGTATTTCATGTTACATTACAAACAACTTGTTCGGTTGCTATGATTGTTGTGTGTACATACATTAGCTTTTAATACAAATTTTATCTATATCCTATTGCCAACTCCAAGGACTTCTCCTGAAACACTCCTTTCAGAATAAGATCTCTGATCATGTATCTTCACAAGCTACCAACACTAGACTTGGGCACCCGATCACAGTTGGCAGTAGCCCATCCAATTGCTTGCTTCTCGTTGTTGTACACTACCATCTTATCTTGCATCGAAATATCTGTCAACCAAACCCCACACAAGATGAGGCTTCTTTTTTTCCCTTTTTCTCTTTAATAAAAGAATAATTTTGCATGGCTATGACGGCATTCGTTTTTATGAGAAATAACATGCAATGCATGCAAAATAACGTACGTACCACCAATGATATTGGAGTTCTCAAGCCCAACTTCACTGCCGTTCAGAATTCCCAAGCAAACATTCCCCTTGGACTGCCAATCCAAAACTTATAAGTTAAATCATTCAACTTATAAATTGTAGTTGTAGAGGGTTGGAGCTTACCGATATTATAAGATAACTTTCCATTGGCATTTCGAACACTGCTTTGCTTCTTCTACCACTGGAAAAGCTCAATGCCAATGGCTTGAAATATTTTCTCACATCACGTAAGCTTTTGAATGGATTCCGCCCTCTCCAGCAGAGCGGCAGCGTGTCATCATCCTTGGCTTCTCTTAGCGGTTTCCCAGTTAGTTCTCTATTCAACTACAAGAACAGTACCAACATGAACTAAAGAATCATTGAGAAAAAGAATCGAAGGTTTTTTTTACGGATGATTTACCAAAGATGTTATAATTTGATAAGCCTGAGCATTGAAGTATGTGTAAGAGCTCCCACTGTCAAAAACTACGAAGAGGTTTCTGAGTCCAGTACTTCTTCCATTGAAGAATAGGTCCCCAAACCCA CTTAATTAACGTTTTTCCAATATATTACTTGGGACTAAAAAAACAAAGACCATAAATTATTTTATTTATTATTATTTTTAGATTTGATAATGGCGTGGCATGTGTGTTTTGGGTTTGGGTTCTAGAAGATAAGAAGTCACCGAATTGGTTATATATATCTCTCATTCTTCCCCCTCTGTGCTCACCCATTCCTGAACCCAGCCGCCGCTCGCTCATCGGAGTTAGATCAGATCCGGCAACACGCCCACCCACACGAACAGAGCGGAGAAGCAGTTCCAAAGCACCAATCCGATAGCAAATGACCGTAGCTGGGCTCGAGTTACCTCCAGGCTTCAGATTTCACCCTACTGATGAGGAGCTAGTCCTTCACTACCTCTGCAGAAAGTGCTCCTCTCAGCCCATCGCCGTCCCCATTATCAAGGAGATCGATCTTTACAAATACGACCCCTGGCACCTTCCTGAATTGGCTGTCTGTGGTGAAAAGGAGTGGTATTTCTTCTCCCCAAGGGACCGCAAGTACCCCAACGGCTCCCGCCCCAACCGTGCTGCCGGTACCGGCTACTGGAAGGCTACCGGCGCTGACAAGCCCATCGGCCGCCCCAAACCTCTTGGCATCAAGAAGGCACTCGTTTTCTACGCCGGCAAGGCCCCAACCGGCGTCAAGACCAATTGGATTATGCACGAGTATCGCCTCGCCAACGTTGACCGATCCGCTACCAAGAAACCCCACAACTTGAGGTTGGATGACTGGGTGCTGTGTCGTATCTACAACAAGAAGGGATGCATAGAAAAGCATTACCAATCCACCGACGACAAGGCATCCGAATTCCCAGACTTCGAGGAAGAGAAGCCCATTATTACGATGCCTAGCACCACCAACATGCTACACCTCCCAATCCATAACAACCAATTGCATATGGACACTTCGGATTCGGTGCCCATAATGCATACCGACGACTCCAGTGGCTCCGATCCGGTGACATCGCCGGAGGTCACGTGGGATAAGGAGGTCCAAAGTGAACCCAAGTGGGGTGGAGGAGCACCAGACTTTGACTTTTTCCAGTTCAATTACATGGATTCTTTCTCCATGACTGAGGACGATCCATTTGGAAGTCAGGTTCCGTTCCAGATGGACCATCTGCCGCCATTTCAGGATATGTTTTCGTGTTTACAGAGGCAGATTTAACCACACCACCACCGCCGCCGCCGCCGTAAGGGCATGGACTAAGGGGTTGCATTCAACCCCATTGCCAGGCTTCCGCTTTCTACTATATATAACATAATATCCATATTTTTAGCAGATTCTTTGATGAACCCAAAACCAATATGCCCAAAAGTATTGTGATGTCTCCTTTTTTTTGCTGGAATGAAGAATTTAGTTAGAAGAGAATTGACCGACCTCTGCTTCTAGAGTTGACGACCTTCATCATCCTTATTCGAGCCCCTCTCATTCAAGCCTCGTATAATCCCAAGGCTGCCTGCAACTGCGACAAACCAAATGATGCTGCTGCACCAGACATGAATGAAATCAGATTGATTTTTGTAATTCCAAAAGCAGAATTAATAAATAATGTCAGTTCCAATTCTATTACTGCACTTGGTAAATCAATCCAAGTGTATTTCATGTTACATTACAAACAACTTGTTCGGTTGCTATGATTGTTGTGTGTACATACATTAGCTTTTAATACAAATTTTATCTATATCCTATTGCCAACTCCAAGGACTTCTCCTGAAACACTCCTTTCAGAATAAGATCTCTGATCATGTATCTTCACAAGCTACCAACACTAGACTTGGGCACCCGATCACAGTTGGCAGTAGCCCATCCAATTGCTTGCTTCTCGTTGTTGTACACTACCATCTTATCTTGCATCGAAATATCTGTCAACCAAACCCCACACAAGATGAGGCTTCTTTTTTTCCCTTTTTCTCTTTAATAAAAGAATAATTTTGCATGGCTATGACGGCATTCGTTTTTATGAGAAATAACATGCAATGCATGCAAAATAACGTACGTACCACCAATGATATTGGAGTTCTCAAGCCCAACTTCACTGCCGTTCAGAATTCCCAAGCAAACATTCCCCTTGGACTGCCAATCCAAAACTTATAAGTTAAATCATTCAACTTATAAATTGTAGTTGTAGAGGGTTGGAGCTTACCGATATTATAAGATAACTTTCCATTGGCATTTCGAACACTGCTTTGCTTCTTCTACCACTGGAAAAGCTCAATGCCAATGGCTTGAAATATTTTCTCACATCACGTAAGCTTTTGAATGGATTCCGCCCTCTCCAGCAGAGCGGCAGCGTGTCATCATCCTTGGCTTCTCTTAGCGGTTTCCCAGTTAGTTCTCTATTCAACTACAAGAACAGTACCAACATGAACTAAAGAATCATTGAGAAAAAGAATCGAAGGTTTTTTTTACGGATGATTTACCAAAGATGTTATAATTTGATAAGCCTGAGCATTGAAGTATGTGTAAGAGCTCCCACTGTCAAAAACTACGAAGAGGTTTCTGAGTCCAGTACTTCTTCCATTGAAGAATAGGTCCCCAAACCCA ATGACCGTAGCTGGGCTCGAGTTACCTCCAGGCTTCAGATTTCACCCTACTGATGAGGAGCTAGTCCTTCACTACCTCTGCAGAAAGTGCTCCTCTCAGCCCATCGCCGTCCCCATTATCAAGGAGATCGATCTTTACAAATACGACCCCTGGCACCTTCCTGAATTGGCTGTCTGTGGTGAAAAGGAGTGGTATTTCTTCTCCCCAAGGGACCGCAAGTACCCCAACGGCTCCCGCCCCAACCGTGCTGCCGGTACCGGCTACTGGAAGGCTACCGGCGCTGACAAGCCCATCGGCCGCCCCAAACCTCTTGGCATCAAGAAGGCACTCGTTTTCTACGCCGGCAAGGCCCCAACCGGCGTCAAGACCAATTGGATTATGCACGAGTATCGCCTCGCCAACGTTGACCGATCCGCTACCAAGAAACCCCACAACTTGAGGTTGGATGACTGGGTGCTGTGTCGTATCTACAACAAGAAGGGATGCATAGAAAAGCATTACCAATCCACCGACGACAAGGCATCCGAATTCCCAGACTTCGAGGAAGAGAAGCCCATTATTACGATGCCTAGCACCACCAACATGCTACACCTCCCAATCCATAACAACCAATTGCATATGGACACTTCGGATTCGGTGCCCATAATGCATACCGACGACTCCAGTGGCTCCGATCCGGTGACATCGCCGGAGGTCACGTGGGATAAGGAGGTCCAAAGTGAACCCAAGTGGGGTGGAGGAGCACCAGACTTTGACTTTTTCCAGTTCAATTACATGGATTCTTTCTCCATGACTGAGGACGATCCATTTGGAAGTCAGGTTCCGTTCCAGATGGACCATCTGCCGCCATTTCAGGATATGTTTTCGTGTTTACAGAGGCAGATTTAA MTVAGLELPPGFRFHPTDEELVLHYLCRKCSSQPIAVPIIKEIDLYKYDPWHLPELAVCGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKPLGIKKALVFYAGKAPTGVKTNWIMHEYRLANVDRSATKKPHNLRLDDWVLCRIYNKKGCIEKHYQSTDDKASEFPDFEEEKPIITMPSTTNMLHLPIHNNQLHMDTSDSVPIMHTDDSSGSDPVTSPEVTWDKEVQSEPKWGGGAPDFDFFQFNYMDSFSMTEDDPFGSQVPFQMDHLPPFQDMFSCLQRQI Homology
BLAST of Cp4.1LG05g15540 vs. ExPASy Swiss-Prot
Match: Q39013 (NAC domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAC002 PE=1 SV=2) HSP 1 Score: 346.7 bits (888), Expect = 2.6e-94 Identity = 186/297 (62.63%), Postives = 211/297 (71.04%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. ExPASy Swiss-Prot
Match: Q9C598 (Protein ATAF2 OS=Arabidopsis thaliana OX=3702 GN=NAC081 PE=1 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 1.1e-87 Identity = 172/287 (59.93%), Postives = 200/287 (69.69%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. ExPASy Swiss-Prot
Match: Q8H115 (NAC domain-containing protein 102 OS=Arabidopsis thaliana OX=3702 GN=NAC102 PE=1 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 3.6e-83 Identity = 165/291 (56.70%), Postives = 190/291 (65.29%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. ExPASy Swiss-Prot
Match: Q7F2L3 (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC048 PE=1 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 4.0e-82 Identity = 157/256 (61.33%), Postives = 184/256 (71.88%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. ExPASy Swiss-Prot
Match: Q9CAR0 (NAC transcription factor 32 OS=Arabidopsis thaliana OX=3702 GN=NAC032 PE=2 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 4.4e-81 Identity = 136/169 (80.47%), Postives = 149/169 (88.17%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. NCBI nr
Match: XP_023533735.1 (NAC domain-containing protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 639 bits (1647), Expect = 8.28e-232 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. NCBI nr
Match: XP_022947787.1 (NAC domain-containing protein 2-like [Cucurbita moschata] >KAG6604701.1 NAC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034832.1 NAC domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 635 bits (1637), Expect = 2.77e-230 Identity = 293/295 (99.32%), Postives = 295/295 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. NCBI nr
Match: XP_022970899.1 (NAC domain-containing protein 2-like [Cucurbita maxima]) HSP 1 Score: 624 bits (1608), Expect = 7.61e-226 Identity = 290/296 (97.97%), Postives = 294/296 (99.32%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. NCBI nr
Match: XP_038900561.1 (NAC domain-containing protein 2-like [Benincasa hispida]) HSP 1 Score: 546 bits (1406), Expect = 5.11e-195 Identity = 262/301 (87.04%), Postives = 273/301 (90.70%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. NCBI nr
Match: XP_004147329.1 (NAC domain-containing protein 2 [Cucumis sativus] >KGN62239.1 hypothetical protein Csa_016935 [Cucumis sativus]) HSP 1 Score: 535 bits (1378), Expect = 9.80e-191 Identity = 258/302 (85.43%), Postives = 270/302 (89.40%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. ExPASy TrEMBL
Match: A0A6J1G7E4 (NAC domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111451546 PE=4 SV=1) HSP 1 Score: 635 bits (1637), Expect = 1.34e-230 Identity = 293/295 (99.32%), Postives = 295/295 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. ExPASy TrEMBL
Match: A0A6J1I702 (NAC domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469734 PE=4 SV=1) HSP 1 Score: 624 bits (1608), Expect = 3.68e-226 Identity = 290/296 (97.97%), Postives = 294/296 (99.32%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. ExPASy TrEMBL
Match: A0A0A0LMH7 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G338830 PE=4 SV=1) HSP 1 Score: 535 bits (1378), Expect = 4.75e-191 Identity = 258/302 (85.43%), Postives = 270/302 (89.40%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. ExPASy TrEMBL
Match: B3SGE8 (NAC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=ATAF PE=2 SV=1) HSP 1 Score: 534 bits (1376), Expect = 9.23e-191 Identity = 259/302 (85.76%), Postives = 269/302 (89.07%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. ExPASy TrEMBL
Match: A0A6J1DXD2 (NAC domain-containing protein 2-like OS=Momordica charantia OX=3673 GN=LOC111024376 PE=4 SV=1) HSP 1 Score: 520 bits (1338), Expect = 5.91e-185 Identity = 248/300 (82.67%), Postives = 264/300 (88.00%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. TAIR 10
Match: AT1G01720.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 346.7 bits (888), Expect = 1.9e-95 Identity = 186/297 (62.63%), Postives = 211/297 (71.04%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. TAIR 10
Match: AT5G08790.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 324.7 bits (831), Expect = 7.6e-89 Identity = 172/287 (59.93%), Postives = 200/287 (69.69%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. TAIR 10
Match: AT5G63790.1 (NAC domain containing protein 102 ) HSP 1 Score: 309.7 bits (792), Expect = 2.5e-84 Identity = 165/291 (56.70%), Postives = 190/291 (65.29%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. TAIR 10
Match: AT1G77450.1 (NAC domain containing protein 32 ) HSP 1 Score: 302.8 bits (774), Expect = 3.1e-82 Identity = 136/169 (80.47%), Postives = 149/169 (88.17%), Query Frame = 0
BLAST of Cp4.1LG05g15540 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 ) HSP 1 Score: 235.0 bits (598), Expect = 8.0e-62 Identity = 117/208 (56.25%), Postives = 143/208 (68.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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