Cp4.1LG05g15210 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG05g15210
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptiontranscription factor TCP3-like
LocationCp4.1LG05: 10495446 .. 10496357 (+)
RNA-Seq ExpressionCp4.1LG05g15210
SyntenyCp4.1LG05g15210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTCCGACGGCGGCGGAGAAGAGCTTAACAAAACTGGCTTACACCAAGGAAGACGAAGACCCAGAATGGGGATGCAGAGTATTAGTGGAGGTGAGATCTTACAAGTTCCTGGCGGCGGCTGCGGCGGCGTCATTGTCCGAGCCACTGGTCGGAAGGACCGCCATAGTAAAGTCTTCACCGCTAAAGGGCTTCGCGACCGCCGTGTTCGTTTATCCGCTCATACTGCTATTCAATTCTACGACGTTCAAGACCGGTTGGGTTATGATCGACCCAGTAAGGCCGTGGATTGGCTAATCAAAAAGGCGAAATCAGCCATTGATAGTCTCTCCCACCTTCCTCCTTGTCCCTCTGAACCAGACCCAAATGGAACCGGTGGTGTTACAGAGCACTCTGAGTCTTCTAGGTATAATGATTTCTTGTTTCAGAGCCAATTGGGTGAAAATTTGATTCCGCCGCCGTTGGATTCCGCCGCCGGTTTCCAGAGCTACCAGAATCTTGGGCTGTCTCTGCAGACACAAAATTCGCCCCACCATGATCAGAATCAGACGGGTCTTTACGCCGCCGGTTCCGGGAATTCTGGTCTTGGATTTGAGGATGGATTTGAGAAAATTGTGGCCTGGAATAGTAATGTCTTCGGTTCGCATCCGAGTTTCAGCCAGTGCTCCGCCGCGTTCCCGCTGAGGGGGCCCCTTCAGTCCAGCCTTGAATCTCCGGTGCCGCATTACGCTTGGAATGAACTCGCCGTCGAGCCCACCGGCAAACGCCACCCGATTCCGGTTCATGATAACTCTTCACCATCAAGTCCCCGGTTTATATCCGGCGGGTTGCCGCATCTTGACGTCCATGGACGGTTTCAAAGCGACGGCGGGAAAGTTCCGTCTCATTCCTCTTTGTATTCCCGCCGATGA

mRNA sequence

ATGAATTCCGACGGCGGCGGAGAAGAGCTTAACAAAACTGGCTTACACCAAGGAAGACGAAGACCCAGAATGGGGATGCAGAGTATTAGTGGAGGTGAGATCTTACAAGTTCCTGGCGGCGGCTGCGGCGGCGTCATTGTCCGAGCCACTGGTCGGAAGGACCGCCATAGTAAAGTCTTCACCGCTAAAGGGCTTCGCGACCGCCGTGTTCGTTTATCCGCTCATACTGCTATTCAATTCTACGACGTTCAAGACCGGTTGGGTTATGATCGACCCAGTAAGGCCGTGGATTGGCTAATCAAAAAGGCGAAATCAGCCATTGATAGTCTCTCCCACCTTCCTCCTTGTCCCTCTGAACCAGACCCAAATGGAACCGGTGGTGTTACAGAGCACTCTGAGTCTTCTAGGTATAATGATTTCTTGTTTCAGAGCCAATTGGGTGAAAATTTGATTCCGCCGCCGTTGGATTCCGCCGCCGGTTTCCAGAGCTACCAGAATCTTGGGCTGTCTCTGCAGACACAAAATTCGCCCCACCATGATCAGAATCAGACGGGTCTTTACGCCGCCGGTTCCGGGAATTCTGGTCTTGGATTTGAGGATGGATTTGAGAAAATTGTGGCCTGGAATAGTAATGTCTTCGGTTCGCATCCGAGTTTCAGCCAGTGCTCCGCCGCGTTCCCGCTGAGGGGGCCCCTTCAGTCCAGCCTTGAATCTCCGGTGCCGCATTACGCTTGGAATGAACTCGCCGTCGAGCCCACCGGCAAACGCCACCCGATTCCGGTTCATGATAACTCTTCACCATCAAGTCCCCGGTTTATATCCGGCGGGTTGCCGCATCTTGACGTCCATGGACGGTTTCAAAGCGACGGCGGGAAAGTTCCGTCTCATTCCTCTTTGTATTCCCGCCGATGA

Coding sequence (CDS)

ATGAATTCCGACGGCGGCGGAGAAGAGCTTAACAAAACTGGCTTACACCAAGGAAGACGAAGACCCAGAATGGGGATGCAGAGTATTAGTGGAGGTGAGATCTTACAAGTTCCTGGCGGCGGCTGCGGCGGCGTCATTGTCCGAGCCACTGGTCGGAAGGACCGCCATAGTAAAGTCTTCACCGCTAAAGGGCTTCGCGACCGCCGTGTTCGTTTATCCGCTCATACTGCTATTCAATTCTACGACGTTCAAGACCGGTTGGGTTATGATCGACCCAGTAAGGCCGTGGATTGGCTAATCAAAAAGGCGAAATCAGCCATTGATAGTCTCTCCCACCTTCCTCCTTGTCCCTCTGAACCAGACCCAAATGGAACCGGTGGTGTTACAGAGCACTCTGAGTCTTCTAGGTATAATGATTTCTTGTTTCAGAGCCAATTGGGTGAAAATTTGATTCCGCCGCCGTTGGATTCCGCCGCCGGTTTCCAGAGCTACCAGAATCTTGGGCTGTCTCTGCAGACACAAAATTCGCCCCACCATGATCAGAATCAGACGGGTCTTTACGCCGCCGGTTCCGGGAATTCTGGTCTTGGATTTGAGGATGGATTTGAGAAAATTGTGGCCTGGAATAGTAATGTCTTCGGTTCGCATCCGAGTTTCAGCCAGTGCTCCGCCGCGTTCCCGCTGAGGGGGCCCCTTCAGTCCAGCCTTGAATCTCCGGTGCCGCATTACGCTTGGAATGAACTCGCCGTCGAGCCCACCGGCAAACGCCACCCGATTCCGGTTCATGATAACTCTTCACCATCAAGTCCCCGGTTTATATCCGGCGGGTTGCCGCATCTTGACGTCCATGGACGGTTTCAAAGCGACGGCGGGAAAGTTCCGTCTCATTCCTCTTTGTATTCCCGCCGATGA

Protein sequence

MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEPDPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHDQNQTGLYAAGSGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPVPHYAWNELAVEPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLYSRR
Homology
[Close]
BLAST of Cp4.1LG05g15210 vs. ExPASy Swiss-Prot
Match: A2WM14 (Transcription factor PCF5 OS=Oryza sativa subsp. indica OX=39946 GN=PCF5 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-30
Identity = 106/256 (41.41%), Postives = 118/256 (46.09%), Query Frame = 0 

Query: 5   GGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKG 64
           GGGE +  T   + R     G     GGEI+ V GG     IVR+TGRKDRHSKV TA+G
Sbjct: 175 GGGEIVPATTTPRSR-----GGGGGGGGEIVAVQGGH----IVRSTGRKDRHSKVCTARG 234

Query: 65  LRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEPDPNG 124
            RDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIK AK AID L  LP         G
Sbjct: 235 PRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKDAIDKLDVLPAWQPTAGGAG 294

Query: 125 TGGVTEHSESSRYN--------------------DFLFQSQLGENLIPPPLD-------- 184
            G       SS +                     DF      G + +PP LD        
Sbjct: 295 AGNAAAPPSSSTHPDSAENSDDQAQAITVAHTAFDFAGGGSGGTSFLPPSLDSDAIADTI 354

Query: 185 -----------------------SAAGFQSY------------QNLGLSLQTQNSP--HH 196
                                  SA GFQSY            Q L LSLQ+   P  HH
Sbjct: 355 KSFFPMGGTAGGEASSSTTAAQSSAMGFQSYTPDLLSRTGSQSQELRLSLQSLPDPMFHH 414

[Close]
BLAST of Cp4.1LG05g15210 vs. ExPASy Swiss-Prot
Match: Q8LT07 (Transcription factor PCF5 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF5 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-30
Identity = 106/256 (41.41%), Postives = 118/256 (46.09%), Query Frame = 0 

Query: 5   GGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKG 64
           GGGE +  T   + R     G     GGEI+ V GG     IVR+TGRKDRHSKV TA+G
Sbjct: 51  GGGEIVPATTTPRSR-----GGGGGGGGEIVAVQGGH----IVRSTGRKDRHSKVCTARG 110

Query: 65  LRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEPDPNG 124
            RDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIK AK AID L  LP         G
Sbjct: 111 PRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKDAIDKLDVLPAWQPTAGGAG 170

Query: 125 TGGVTEHSESSRYN--------------------DFLFQSQLGENLIPPPLD-------- 184
            G       SS +                     DF      G + +PP LD        
Sbjct: 171 AGNAAAPPSSSTHPDSAENSDDQAQAITVAHTAFDFAGGGSGGTSFLPPSLDSDAIADTI 230

Query: 185 -----------------------SAAGFQSY------------QNLGLSLQTQNSP--HH 196
                                  SA GFQSY            Q L LSLQ+   P  HH
Sbjct: 231 KSFFPMGGTAGGEASSSTTAAQSSAMGFQSYTPDLLSRTGSQSQELRLSLQSLPDPMFHH 290

[Close]
BLAST of Cp4.1LG05g15210 vs. ExPASy Swiss-Prot
Match: O82277 (Transcription factor TCP10 OS=Arabidopsis thaliana OX=3702 GN=TCP10 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.1e-30
Identity = 82/172 (47.67%), Postives = 103/172 (59.88%), Query Frame = 0 

Query: 24  MGMQSIS----GGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSAHTAIQ 83
           MG++  S    GGEI++V GG     I+RATGRKDRHSKVFT+KG RDRRVRLSAHTAIQ
Sbjct: 1   MGLKGYSVGEGGGEIVEVQGGH----IIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQ 60

Query: 84  FYDVQDRLGYDRPSKAVDWLIKKAKSAIDSL---------SHLPPCPSEPDPNGTGGVTE 143
           FYDVQDRLGYDRPSKAVDWLIKKAK+AID L         +   P  ++P+        E
Sbjct: 61  FYDVQDRLGYDRPSKAVDWLIKKAKTAIDKLELGETTTTTTRQEPVNTKPESPTLVFQRE 120

Query: 144 HSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHDQN 183
           +++ +++       +       P   +  G       G ++  QN PH D N
Sbjct: 121 NNDQTQFVAANLDPEDAMKTFFPATTTTNG-----GGGTNINFQNYPHQDDN 163

[Close]
BLAST of Cp4.1LG05g15210 vs. ExPASy Swiss-Prot
Match: Q8LPR5 (Transcription factor TCP4 OS=Arabidopsis thaliana OX=3702 GN=TCP4 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.2e-30
Identity = 67/84 (79.76%), Postives = 74/84 (88.10%), Query Frame = 0 

Query: 32  GEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDR 91
           GEI++V GG     IVR+TGRKDRHSKV TAKG RDRRVRLSAHTAIQFYDVQDRLG+DR
Sbjct: 29  GEIVEVQGGH----IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDR 88

Query: 92  PSKAVDWLIKKAKSAIDSLSHLPP 116
           PSKAVDWLIKKAK++ID L+ LPP
Sbjct: 89  PSKAVDWLIKKAKTSIDELAELPP 108

[Close]
BLAST of Cp4.1LG05g15210 vs. ExPASy Swiss-Prot
Match: Q9MAH8 (Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.9e-29
Identity = 67/84 (79.76%), Postives = 70/84 (83.33%), Query Frame = 0 

Query: 39  GGGC-------GGVIVRATGRKDRHSKVFTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDR 98
           GGGC       GG IVR+TGRKDRHSKV TAKG RDRRVRLSA TAIQFYDVQDRLG+DR
Sbjct: 29  GGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDR 88

Query: 99  PSKAVDWLIKKAKSAIDSLSHLPP 116
           PSKAVDWLI KAKSAID L+ LPP
Sbjct: 89  PSKAVDWLITKAKSAIDDLAQLPP 112

[Close]
BLAST of Cp4.1LG05g15210 vs. NCBI nr
Match: XP_023533212.1 (transcription factor TCP3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 624 bits (1608), Expect = 1.37e-225
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0 

Query: 1   MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60
           MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF
Sbjct: 1   MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60

Query: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEP 120
           TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEP
Sbjct: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEP 120

Query: 121 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD 180
           DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD
Sbjct: 121 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD 180

Query: 181 QNQTGLYAAGSGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV 240
           QNQTGLYAAGSGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV
Sbjct: 181 QNQTGLYAAGSGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV 240

Query: 241 PHYAWNELAVEPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY 300
           PHYAWNELAVEPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY
Sbjct: 241 PHYAWNELAVEPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY 300

Query: 301 SRR 303
           SRR
Sbjct: 301 SRR 303

[Close]
BLAST of Cp4.1LG05g15210 vs. NCBI nr
Match: KAG7034889.1 (Transcription factor TCP4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 618 bits (1593), Expect = 2.65e-223
Identity = 299/303 (98.68%), Postives = 301/303 (99.34%), Query Frame = 0 

Query: 1   MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60
           MNSDGGGEELNKTGLHQGRRRPRMGMQSI GGEILQVPGGGCGGVIVRATGRKDRHSKVF
Sbjct: 1   MNSDGGGEELNKTGLHQGRRRPRMGMQSIGGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60

Query: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEP 120
           TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAID+LSHLPPCPSEP
Sbjct: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLPPCPSEP 120

Query: 121 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD 180
           DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD
Sbjct: 121 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD 180

Query: 181 QNQTGLYAAGSGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV 240
           QNQTGLYAAGSGNS LGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV
Sbjct: 181 QNQTGLYAAGSGNSDLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV 240

Query: 241 PHYAWNELAVEPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY 300
           PHYAWNELAVEPTGKRHPIP+HDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY
Sbjct: 241 PHYAWNELAVEPTGKRHPIPIHDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY 300

Query: 301 SRR 303
           SRR
Sbjct: 301 SRR 303

[Close]
BLAST of Cp4.1LG05g15210 vs. NCBI nr
Match: XP_022947877.1 (transcription factor TCP3-like [Cucurbita moschata])

HSP 1 Score: 615 bits (1587), Expect = 2.18e-222
Identity = 299/303 (98.68%), Postives = 301/303 (99.34%), Query Frame = 0 

Query: 1   MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60
           MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF
Sbjct: 1   MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60

Query: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEP 120
           TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAID+LSHLPPCPSEP
Sbjct: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLPPCPSEP 120

Query: 121 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD 180
           DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD
Sbjct: 121 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD 180

Query: 181 QNQTGLYAAGSGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV 240
           QNQTGLYAAGSGNS LGFEDGFEKIVAWNSNVFGSHPSFSQ SAAFPLRGPLQSSLESPV
Sbjct: 181 QNQTGLYAAGSGNSDLGFEDGFEKIVAWNSNVFGSHPSFSQSSAAFPLRGPLQSSLESPV 240

Query: 241 PHYAWNELAVEPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY 300
           PHYAWNELAVEPTGKRHPIP+HDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY
Sbjct: 241 PHYAWNELAVEPTGKRHPIPIHDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY 300

Query: 301 SRR 303
           SRR
Sbjct: 301 SRR 303

[Close]
BLAST of Cp4.1LG05g15210 vs. NCBI nr
Match: XP_022970749.1 (transcription factor TCP3-like [Cucurbita maxima])

HSP 1 Score: 596 bits (1537), Expect = 9.15e-215
Identity = 287/303 (94.72%), Postives = 294/303 (97.03%), Query Frame = 0 

Query: 1   MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60
           MN DGGGEELNK+GL   RRRPRMGMQSI GGEILQVPGGGCGGVIVRATGRKDRHSKVF
Sbjct: 1   MNPDGGGEELNKSGLQHARRRPRMGMQSIGGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60

Query: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEP 120
           TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAID+LSHLPPCPSEP
Sbjct: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLPPCPSEP 120

Query: 121 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD 180
           DPNGTGGVTEHSESSRY++FLFQS LGENLIPPPLDS AGFQSYQNLGLSLQTQNSPHHD
Sbjct: 121 DPNGTGGVTEHSESSRYSEFLFQSHLGENLIPPPLDSTAGFQSYQNLGLSLQTQNSPHHD 180

Query: 181 QNQTGLYAAGSGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV 240
           QNQTGLYAAGSGNSGLGF+DGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV
Sbjct: 181 QNQTGLYAAGSGNSGLGFDDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV 240

Query: 241 PHYAWNELAVEPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY 300
           PHYAWNELAV+P GKRHPIP+HDNSSPSSPRFIS GLPHLDVHGRFQSDGGKVPSHSSLY
Sbjct: 241 PHYAWNELAVDPAGKRHPIPIHDNSSPSSPRFISSGLPHLDVHGRFQSDGGKVPSHSSLY 300

Query: 301 SRR 303
           SRR
Sbjct: 301 SRR 303

[Close]
BLAST of Cp4.1LG05g15210 vs. NCBI nr
Match: KAG6604760.1 (Transcription factor TCP4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 582 bits (1499), Expect = 1.11e-208
Identity = 281/285 (98.60%), Postives = 283/285 (99.30%), Query Frame = 0 

Query: 1   MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60
           MNSDGGGEELNKTGLHQGRRRPRMGMQSI GGEILQVPGGGCGGVIVRATGRKDRHSKVF
Sbjct: 1   MNSDGGGEELNKTGLHQGRRRPRMGMQSIGGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60

Query: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEP 120
           TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAID+LSHLPPCPSEP
Sbjct: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLPPCPSEP 120

Query: 121 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD 180
           DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD
Sbjct: 121 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD 180

Query: 181 QNQTGLYAAGSGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV 240
           QNQTGLYAAGSGNS LGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV
Sbjct: 181 QNQTGLYAAGSGNSDLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV 240

Query: 241 PHYAWNELAVEPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGR 285
           PHYAWNELAVEPTGKRHPIP+HDNSSPSSPRFISGGLPHLDVHGR
Sbjct: 241 PHYAWNELAVEPTGKRHPIPIHDNSSPSSPRFISGGLPHLDVHGR 285

[Close]
BLAST of Cp4.1LG05g15210 vs. ExPASy TrEMBL
Match: A0A6J1G7M2 (transcription factor TCP3-like OS=Cucurbita moschata OX=3662 GN=LOC111451636 PE=4 SV=1)

HSP 1 Score: 615 bits (1587), Expect = 1.06e-222
Identity = 299/303 (98.68%), Postives = 301/303 (99.34%), Query Frame = 0 

Query: 1   MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60
           MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF
Sbjct: 1   MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60

Query: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEP 120
           TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAID+LSHLPPCPSEP
Sbjct: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLPPCPSEP 120

Query: 121 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD 180
           DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD
Sbjct: 121 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD 180

Query: 181 QNQTGLYAAGSGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV 240
           QNQTGLYAAGSGNS LGFEDGFEKIVAWNSNVFGSHPSFSQ SAAFPLRGPLQSSLESPV
Sbjct: 181 QNQTGLYAAGSGNSDLGFEDGFEKIVAWNSNVFGSHPSFSQSSAAFPLRGPLQSSLESPV 240

Query: 241 PHYAWNELAVEPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY 300
           PHYAWNELAVEPTGKRHPIP+HDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY
Sbjct: 241 PHYAWNELAVEPTGKRHPIPIHDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY 300

Query: 301 SRR 303
           SRR
Sbjct: 301 SRR 303

[Close]
BLAST of Cp4.1LG05g15210 vs. ExPASy TrEMBL
Match: A0A6J1I6J3 (transcription factor TCP3-like OS=Cucurbita maxima OX=3661 GN=LOC111469647 PE=4 SV=1)

HSP 1 Score: 596 bits (1537), Expect = 4.43e-215
Identity = 287/303 (94.72%), Postives = 294/303 (97.03%), Query Frame = 0 

Query: 1   MNSDGGGEELNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60
           MN DGGGEELNK+GL   RRRPRMGMQSI GGEILQVPGGGCGGVIVRATGRKDRHSKVF
Sbjct: 1   MNPDGGGEELNKSGLQHARRRPRMGMQSIGGGEILQVPGGGCGGVIVRATGRKDRHSKVF 60

Query: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEP 120
           TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAID+LSHLPPCPSEP
Sbjct: 61  TAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLPPCPSEP 120

Query: 121 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHD 180
           DPNGTGGVTEHSESSRY++FLFQS LGENLIPPPLDS AGFQSYQNLGLSLQTQNSPHHD
Sbjct: 121 DPNGTGGVTEHSESSRYSEFLFQSHLGENLIPPPLDSTAGFQSYQNLGLSLQTQNSPHHD 180

Query: 181 QNQTGLYAAGSGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV 240
           QNQTGLYAAGSGNSGLGF+DGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV
Sbjct: 181 QNQTGLYAAGSGNSGLGFDDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPV 240

Query: 241 PHYAWNELAVEPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQSDGGKVPSHSSLY 300
           PHYAWNELAV+P GKRHPIP+HDNSSPSSPRFIS GLPHLDVHGRFQSDGGKVPSHSSLY
Sbjct: 241 PHYAWNELAVDPAGKRHPIPIHDNSSPSSPRFISSGLPHLDVHGRFQSDGGKVPSHSSLY 300

Query: 301 SRR 303
           SRR
Sbjct: 301 SRR 303

[Close]
BLAST of Cp4.1LG05g15210 vs. ExPASy TrEMBL
Match: A0A1S3C3A0 (transcription factor TCP4-like OS=Cucumis melo OX=3656 GN=LOC103496364 PE=4 SV=1)

HSP 1 Score: 373 bits (958), Expect = 5.53e-127
Identity = 198/303 (65.35%), Postives = 228/303 (75.25%), Query Frame = 0 

Query: 24  MGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSAHTAIQFYDV 83
           MG+ +I+G +IL VPGGG   ++VR+T RKDRHSKV+T++GLRDRRVRLSAHTAIQFYDV
Sbjct: 1   MGINTIAG-QILHVPGGG---LVVRSTARKDRHSKVYTSRGLRDRRVRLSAHTAIQFYDV 60

Query: 84  QDRLGYDRPSKAVDWLIKKAKSAIDSLS-HLPPC--------PSEPDPNGTGGVTEHSES 143
           QDRLGYDRPSKAVDWLIKKAKSAID LS +LPPC        P E + NG   V + SE 
Sbjct: 61  QDRLGYDRPSKAVDWLIKKAKSAIDKLSANLPPCNTTAPSSVPVETETNGIDVVVDRSEC 120

Query: 144 SRYNDFLFQSQLGENLIPPP----LDSAAGFQSYQNLGLSLQTQNSPHHDQNQTGLYAAG 203
            + +DFLFQSQ  ENLIPPP    ++S  GF+S +NLGLSLQTQNSPH+  +QT  Y A 
Sbjct: 121 CKNHDFLFQSQFSENLIPPPPPPPVESGVGFRSCRNLGLSLQTQNSPHNVHHQTVFYTAN 180

Query: 204 SGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPVPHYAWNELAV 263
           SGNSG GF+DGFEKIVAWN+NVFGS P  +Q S AFP RGPLQSSLES VPHY WN+L++
Sbjct: 181 SGNSGPGFDDGFEKIVAWNTNVFGSIPIVNQSSTAFPQRGPLQSSLESTVPHYTWNDLSI 240

Query: 264 EPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQSDG----------GKVPSHSSLY 303
              GKRHP P+ +N SPS PRFIS  LPHLDVHGRFQ+DG          GK  S SS Y
Sbjct: 241 VSAGKRHPNPIQENPSPSIPRFISNELPHLDVHGRFQNDGDGDDDGNGNGGKASSRSSSY 299

[Close]
BLAST of Cp4.1LG05g15210 vs. ExPASy TrEMBL
Match: A0A5D3CTP8 (Transcription factor TCP4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00840 PE=4 SV=1)

HSP 1 Score: 374 bits (960), Expect = 5.69e-127
Identity = 201/317 (63.41%), Postives = 231/317 (72.87%), Query Frame = 0 

Query: 10  LNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRR 69
           LN T          MG+ +I+G +IL VPGGG   ++VR+T RKDRHSKV+T++GLRDRR
Sbjct: 8   LNSTLEQHSTPTTTMGINTIAG-QILHVPGGG---LVVRSTARKDRHSKVYTSRGLRDRR 67

Query: 70  VRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLS-HLPPC--------PSEP 129
           VRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAID LS +LPPC        P E 
Sbjct: 68  VRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLSANLPPCNTTAPSSVPVET 127

Query: 130 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPP----LDSAAGFQSYQNLGLSLQTQNS 189
           + NG   V + SE  + +DFLFQSQ  ENLIPPP    ++S  GF+S +NLGLSLQTQNS
Sbjct: 128 ETNGIDVVVDRSECCKNHDFLFQSQFSENLIPPPPPPPVESGVGFRSCRNLGLSLQTQNS 187

Query: 190 PHHDQNQTGLYAAGSGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSL 249
           PH+  +QT  Y A SGNSG GF+DGFEKIVAWN+NVFGS P  +Q S AFP RGPLQSSL
Sbjct: 188 PHNVHHQTVFYTANSGNSGPGFDDGFEKIVAWNTNVFGSIPIVNQSSTAFPQRGPLQSSL 247

Query: 250 ESPVPHYAWNELAVEPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQSDG------ 303
           ES VPHY WN+L++   GKRHP P+ +N SPS PRFIS  LPHLDVHGRFQ+DG      
Sbjct: 248 ESTVPHYTWNDLSIVSAGKRHPNPIQENPSPSIPRFISNELPHLDVHGRFQNDGDGDDDG 307

[Close]
BLAST of Cp4.1LG05g15210 vs. ExPASy TrEMBL
Match: A0A0A0KF06 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G156050 PE=4 SV=1)

HSP 1 Score: 366 bits (940), Expect = 5.79e-124
Identity = 199/315 (63.17%), Postives = 227/315 (72.06%), Query Frame = 0 

Query: 10  LNKTGLHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRR 69
           LN T          MG+ +I G + + +PGGG   ++VR+T RKDRHSKV+T++GLRDRR
Sbjct: 8   LNSTLEQHSTPTTTMGINTIPG-QNIHIPGGG---LVVRSTARKDRHSKVYTSRGLRDRR 67

Query: 70  VRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLS-HLPPC--------PSEP 129
           VRLSAHTAIQFYDVQDRLG+DRPSKAVDWLIKKAKSAID LS  LPPC        P E 
Sbjct: 68  VRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKSAIDKLSADLPPCNTNACFSVPVET 127

Query: 130 DPNGTGGVTEHSESSRYNDFLFQSQLGENLIPPP----LDSAAGFQSYQNLGLSLQTQNS 189
             NG   V + SE  + +DFLFQSQ  ENLIPPP    ++S  GFQS +NLGLSLQTQNS
Sbjct: 128 QTNGIDVVVDRSECCKNHDFLFQSQFSENLIPPPPPPPIESGLGFQSCRNLGLSLQTQNS 187

Query: 190 PH--HDQNQTGLYAAGSGNSGLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQS 249
           P   H  +QT  Y A SGNSG GF+DGFEKIVAWN+NVFGS P  +Q S AFP RGPLQS
Sbjct: 188 PQNVHHHHQTVFYTASSGNSGPGFDDGFEKIVAWNTNVFGSIPILNQSSTAFPQRGPLQS 247

Query: 250 SLESPVPHYAWNELAVEPTGKRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQSDG---- 303
            LES VPHY WN+L+V   GKRHP P+ +NSSPS PRFIS  LPHLDVHG+FQ+DG    
Sbjct: 248 RLESTVPHYTWNDLSVVAAGKRHPNPIQENSSPSIPRFISNELPHLDVHGQFQNDGDGKD 307

[Close]
BLAST of Cp4.1LG05g15210 vs. TAIR 10
Match: AT2G31070.1 (TCP domain protein 10 )

HSP 1 Score: 134.4 bits (337), Expect = 1.5e-31
Identity = 82/172 (47.67%), Postives = 103/172 (59.88%), Query Frame = 0 

Query: 24  MGMQSIS----GGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSAHTAIQ 83
           MG++  S    GGEI++V GG     I+RATGRKDRHSKVFT+KG RDRRVRLSAHTAIQ
Sbjct: 1   MGLKGYSVGEGGGEIVEVQGGH----IIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQ 60

Query: 84  FYDVQDRLGYDRPSKAVDWLIKKAKSAIDSL---------SHLPPCPSEPDPNGTGGVTE 143
           FYDVQDRLGYDRPSKAVDWLIKKAK+AID L         +   P  ++P+        E
Sbjct: 61  FYDVQDRLGYDRPSKAVDWLIKKAKTAIDKLELGETTTTTTRQEPVNTKPESPTLVFQRE 120

Query: 144 HSESSRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHDQN 183
           +++ +++       +       P   +  G       G ++  QN PH D N
Sbjct: 121 NNDQTQFVAANLDPEDAMKTFFPATTTTNG-----GGGTNINFQNYPHQDDN 163

[Close]
BLAST of Cp4.1LG05g15210 vs. TAIR 10
Match: AT3G15030.1 (TCP family transcription factor 4 )

HSP 1 Score: 132.9 bits (333), Expect = 4.4e-31
Identity = 67/84 (79.76%), Postives = 74/84 (88.10%), Query Frame = 0 

Query: 32  GEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDR 91
           GEI++V GG     IVR+TGRKDRHSKV TAKG RDRRVRLSAHTAIQFYDVQDRLG+DR
Sbjct: 29  GEIVEVQGGH----IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDR 88

Query: 92  PSKAVDWLIKKAKSAIDSLSHLPP 116
           PSKAVDWLIKKAK++ID L+ LPP
Sbjct: 89  PSKAVDWLIKKAKTSIDELAELPP 108

[Close]
BLAST of Cp4.1LG05g15210 vs. TAIR 10
Match: AT3G15030.2 (TCP family transcription factor 4 )

HSP 1 Score: 132.9 bits (333), Expect = 4.4e-31
Identity = 67/84 (79.76%), Postives = 74/84 (88.10%), Query Frame = 0 

Query: 32  GEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDR 91
           GEI++V GG     IVR+TGRKDRHSKV TAKG RDRRVRLSAHTAIQFYDVQDRLG+DR
Sbjct: 29  GEIVEVQGGH----IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDR 88

Query: 92  PSKAVDWLIKKAKSAIDSLSHLPP 116
           PSKAVDWLIKKAK++ID L+ LPP
Sbjct: 89  PSKAVDWLIKKAKTSIDELAELPP 108

[Close]
BLAST of Cp4.1LG05g15210 vs. TAIR 10
Match: AT3G15030.3 (TCP family transcription factor 4 )

HSP 1 Score: 132.9 bits (333), Expect = 4.4e-31
Identity = 67/84 (79.76%), Postives = 74/84 (88.10%), Query Frame = 0 

Query: 32  GEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDR 91
           GEI++V GG     IVR+TGRKDRHSKV TAKG RDRRVRLSAHTAIQFYDVQDRLG+DR
Sbjct: 29  GEIVEVQGGH----IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDR 88

Query: 92  PSKAVDWLIKKAKSAIDSLSHLPP 116
           PSKAVDWLIKKAK++ID L+ LPP
Sbjct: 89  PSKAVDWLIKKAKTSIDELAELPP 108

[Close]
BLAST of Cp4.1LG05g15210 vs. TAIR 10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 )

HSP 1 Score: 129.0 bits (323), Expect = 6.3e-30
Identity = 67/84 (79.76%), Postives = 70/84 (83.33%), Query Frame = 0 

Query: 39  GGGC-------GGVIVRATGRKDRHSKVFTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDR 98
           GGGC       GG IVR+TGRKDRHSKV TAKG RDRRVRLSA TAIQFYDVQDRLG+DR
Sbjct: 29  GGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDR 88

Query: 99  PSKAVDWLIKKAKSAIDSLSHLPP 116
           PSKAVDWLI KAKSAID L+ LPP
Sbjct: 89  PSKAVDWLITKAKSAIDDLAQLPP 112

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g15210 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A2WM141.6e-3041.41Transcription factor PCF5 OS=Oryza sativa subsp. indica OX=39946 GN=PCF5 PE=4 SV... [more]
Q8LT071.6e-3041.41Transcription factor PCF5 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF5 PE=2 ... [more]
O822772.1e-3047.67Transcription factor TCP10 OS=Arabidopsis thaliana OX=3702 GN=TCP10 PE=1 SV=1[more]
Q8LPR56.2e-3079.76Transcription factor TCP4 OS=Arabidopsis thaliana OX=3702 GN=TCP4 PE=1 SV=1[more]
Q9MAH88.9e-2979.76Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1[more]
BLAST of Cp4.1LG05g15210 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023533212.11.37e-225100.00transcription factor TCP3-like [Cucurbita pepo subsp. pepo][more]
KAG7034889.12.65e-22398.68Transcription factor TCP4, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022947877.12.18e-22298.68transcription factor TCP3-like [Cucurbita moschata][more]
XP_022970749.19.15e-21594.72transcription factor TCP3-like [Cucurbita maxima][more]
KAG6604760.11.11e-20898.60Transcription factor TCP4, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Cp4.1LG05g15210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G7M21.06e-22298.68transcription factor TCP3-like OS=Cucurbita moschata OX=3662 GN=LOC111451636 PE=... [more]
A0A6J1I6J34.43e-21594.72transcription factor TCP3-like OS=Cucurbita maxima OX=3661 GN=LOC111469647 PE=4 ... [more]
A0A1S3C3A05.53e-12765.35transcription factor TCP4-like OS=Cucumis melo OX=3656 GN=LOC103496364 PE=4 SV=1[more]
A0A5D3CTP85.69e-12763.41Transcription factor TCP4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A0A0KF065.79e-12463.17TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G156050 PE=4 SV... [more]
BLAST of Cp4.1LG05g15210 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G31070.11.5e-3147.67TCP domain protein 10 [more]
AT3G15030.14.4e-3179.76TCP family transcription factor 4 [more]
AT3G15030.24.4e-3179.76TCP family transcription factor 4 [more]
AT3G15030.34.4e-3179.76TCP family transcription factor 4 [more]
AT1G53230.16.3e-3079.76TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017887Transcription factor TCP subgroupPFAMPF03634TCPcoord: 51..134
e-value: 1.4E-30
score: 106.9
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 52..110
score: 31.871525
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..132
NoneNo IPR availablePANTHERPTHR31072:SF136TRANSCRIPTION FACTOR TCP10coord: 26..289
IPR005333Transcription factor, TCPPANTHERPTHR31072TRANSCRIPTION FACTOR TCP4-RELATEDcoord: 26..289

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g15210.1Cp4.1LG05g15210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:2000032 regulation of secondary shoot formation
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding