Cp4.1LG05g14720 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTATCTAGGTCGGGTATGGATGGCGGCGAGTGTAGCCGTAGTCCACGGCGGCCAATCGGACGGCCGCCACGGATCGGCTGAAGGAATCTTAACTCTGCACCGAAATGCAGAAACAACCGCCGTAGCCGTAGATCTCCGCCAATTTTCAACAGCGACGAGTCACTCGAATCGCGATGGAGACGAGAAGAGGCAAGCCGATGAGTCTCTCCGCCGAGTTATGTACTTCAATTGCTGGGGCCAAGGCTGAGATTTGAGAACAACGGCAAGGACATGAGCGATCGAGAGTTTTTGCCCTTGTTTAGGGCTTTTTTTTTTTTTTCTGATCGGAAACGAGGATCGGCTCTGTGATTGTTGACCTTTTTTTACAGAACGATCTCATCCTTGATTGTAAATTACTGGAATCGGGAAGCGATTGATCGGAAACGAGGATTCGTTGTTGCCTTGCGTGTAATTAAAACTAAATGTATAAACGAAATCAAACTGTTCACGATTTCGGTGATTTTTTTTTTTTTTCAATAATCATCAACCTTGTTTATGATCCATTTCTGTGATCCTTTCTGGTGAGGGAATTCATTGATCCAATCGATCTGGAATTCATAATTAAAATTGCTGAACTCATTCTTGACTGATGAATCGATCAAAAAGTGGTGACCCGAAATTTCCAGTTTCGGGTTTAGACAAATTTGAGATAGAACACTATAATGAGTATCTATTCATATGAAATTTTTGAAGAATTTCGATATTTTGAAGGGAAATTTTTAAATTTTTAATTCATTGAAGTTGTTGAAATCCTTTTAGATTTGATTATTGATAATTTGCACAAGAAATATTTTGAATATCTTTCTTAATTAGGTTAGAATGATGGTCCTGTTCGGGCGCCTGGTTCGGGGCCCCATCTTATCGATGAATCGGAGCGTGATACTCTCCTAATCTAA ATGAGTCGGGTATGGATGGCGGCGAGTGTAGCCGTAGTCCACGGCGGCCAATCGGACGGCCGCCACGGATCGGCTGAAGGAATCTTAACTCTGCACCGAAATGCAGAAACAACCGCCGTAGCCGTAGATCTCCGCCAATTTTCAACAGCGACGAGTCACTCGAATCGCGATGGAGACGAGAAGAGGCAAGCCGATGAGTCTCTCCGCCGAGTTATAACGATCTCATCCTTGATTGTAAATTACTGGAATCGGGAAGCGATTGATCGGAAACGAGGATTCGTTGTTGCCTTGCGTAATGATGGTCCTGTTCGGGCGCCTGGTTCGGGGCCCCATCTTATCGATGAATCGGAGCGTGATACTCTCCTAATCTAA ATGAGTCGGGTATGGATGGCGGCGAGTGTAGCCGTAGTCCACGGCGGCCAATCGGACGGCCGCCACGGATCGGCTGAAGGAATCTTAACTCTGCACCGAAATGCAGAAACAACCGCCGTAGCCGTAGATCTCCGCCAATTTTCAACAGCGACGAGTCACTCGAATCGCGATGGAGACGAGAAGAGGCAAGCCGATGAGTCTCTCCGCCGAGTTATAACGATCTCATCCTTGATTGTAAATTACTGGAATCGGGAAGCGATTGATCGGAAACGAGGATTCGTTGTTGCCTTGCGTAATGATGGTCCTGTTCGGGCGCCTGGTTCGGGGCCCCATCTTATCGATGAATCGGAGCGTGATACTCTCCTAATCTAA MSRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVAVDLRQFSTATSHSNRDGDEKRQADESLRRVITISSLIVNYWNREAIDRKRGFVVALRNDGPVRAPGSGPHLIDESERDTLLI Homology
BLAST of Cp4.1LG05g14720 vs. NCBI nr
Match: KAG7034937.1 (hypothetical protein SDJN02_01730, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 135 bits (341), Expect = 6.29e-39 Identity = 68/72 (94.44%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of Cp4.1LG05g14720 vs. NCBI nr
Match: KAG6604822.1 (Vesicle-associated protein 4-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 135 bits (341), Expect = 9.60e-36 Identity = 68/72 (94.44%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of Cp4.1LG05g14720 vs. NCBI nr
Match: KAA0047914.1 (wound-responsive family protein [Cucumis melo var. makuwa]) HSP 1 Score: 53.5 bits (127), Expect = 1.96e-06 Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Cp4.1LG05g14720 vs. NCBI nr
Match: KAG6416916.1 (hypothetical protein SASPL_124357 [Salvia splendens]) HSP 1 Score: 49.3 bits (116), Expect = 1.32e-04 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 0
BLAST of Cp4.1LG05g14720 vs. ExPASy TrEMBL
Match: A0A5A7TY19 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001960 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 9.49e-07 Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Cp4.1LG05g14720 vs. ExPASy TrEMBL
Match: A0A4D8Y3H7 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_001221 PE=4 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 6.40e-05 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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