Cp4.1LG05g13900 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g13900
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	scarecrow-like transcription factor PAT1
Location	Cp4.1LG05: 9850883 .. 9852493 (+)
RNA-Seq Expression	Cp4.1LG05g13900
Synteny	Cp4.1LG05g13900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGCTTCTCAGCTTCATAGAGGTCAACATATGTCGAAAAGACTGTGTTATCAGCCACTTCAAGGAGTGGATGCCTACTGTGTCTCCCAATTTCAAACTTTAGGTCGCCAATTATATACCAATGCTGGCAACGAAAGAGCTCAGTTCAATCTTCAAGACATCAGTGATCGGTACTGCACTTTGGAATCGTCCTCGGGAAGCCACGGCTATGCAACTCACAACTCGACGTCGACGACCGTCACTTTCTCATCCAATGGGAGTCCTTCTGATCAGCATAATTCCCCTGACAATACGTATGGCTCACCAGTAAGCGGATCCTGCATAACAGATGATATTAGTGATTTTAGGCACAAACTGCTGGAATTGGAAACTGTGATGCTTGGCCCTGATTCTGATATTATTGATAGTTTTGATAGTTTCTACCAGGAAGGAACAGAGAATTCAGAAGTGGGAAGTTGGGGACAAGTGATGGATGCTATCACTAAAGGGAACTTAAAAAAGATCCTAATAGCTTGTGCTAAGGCCGTGTCCGATAATGATGCCTTAATGGCGCAATGGCTTATGGATGAACTGCGCAAGATGGTGTCGGTTCGGGGTGAACCGATGCAGAGATTGGGAGCTTATATGTTGGAGGGGCTGGTTGCACGGTCAGCCTTCTCAGGCAGTAGCATCTATAAATCTTTGAGATGCAAGGAACCAGCAAGCATGGAGCTCCTCTCTTATATGCATGTTTTGTACGATGTTTGCCCGTATTTCAAATTTGGATACATGTCTGCAAATGGTGCCATTGCAGAAGCCATGAAAGATGAAGATAGAGTACACATCATTGATTTCCAAATCTCTCAGGGTACTCAATGGATCACTTTGATTCAAGCTTTTGCAGGCAGGCCTGGTGGACCGCCTCACATTCGTATAACCGGCATAGATGATCCTGCATCAGCTCACGCTCGGGGAGGCGGTCTAGATATCGTTGGGATGAGGCTTTCTAAGTTAGCGAAGTTATTTAATGTCCCATTTGAGTTTCACTCGGCTGCCATCTCTGGCTGCGACGTTCAGCAGAAAGACTTGGGAATTCGACGAGGGGAGGCTTTAGCAGTGAACTTTGCATTCATGCTACACCATATGCCAGATGAGAGCGTAAGCACCGAAAACCATCGAGATCGGTTATTGAGGCTGGTTAAGGGTCTGTCTCCAAAGGTAGTGACCCTTGTTGAACAAGAATCCAACACGAACACCGCTGCGTTCTTTCCCCGGTTCATCGAGACGCTGGATTACTACAACGCCATGTTCGAATCAATCGACGTTACTCTTCCAAGGCAGCACAAGGAGCGAATCAACATCGAGCAGCATTGTCTAGCCAGGGAAGTTGTCAACATACTAGCATGTGAAGGGGCAGAGAGAGTAGAACGACACGAGCTACTCGGAAAGTGGCGACTGCGATTCTCAATGGCAGGATTCACTCCCTACCCATTAAGCTCTTTGGTGAATGCTACCATAAAAACGTTATTAGATAACTATTCTAACAGGTATAGGCTTGAAGAGAAAGAAGGGGCTCTATATCTAGGTTGGATGGATAGGGATTTGGTTGCTTCTTGTGCATGGAAGTGA

mRNA sequence

ATGCAAGCTTCTCAGCTTCATAGAGGTCAACATATGTCGAAAAGACTGTGTTATCAGCCACTTCAAGGAGTGGATGCCTACTGTGTCTCCCAATTTCAAACTTTAGGTCGCCAATTATATACCAATGCTGGCAACGAAAGAGCTCAGTTCAATCTTCAAGACATCAGTGATCGGTACTGCACTTTGGAATCGTCCTCGGGAAGCCACGGCTATGCAACTCACAACTCGACGTCGACGACCGTCACTTTCTCATCCAATGGGAGTCCTTCTGATCAGCATAATTCCCCTGACAATACGTATGGCTCACCAGTAAGCGGATCCTGCATAACAGATGATATTAGTGATTTTAGGCACAAACTGCTGGAATTGGAAACTGTGATGCTTGGCCCTGATTCTGATATTATTGATAGTTTTGATAGTTTCTACCAGGAAGGAACAGAGAATTCAGAAGTGGGAAGTTGGGGACAAGTGATGGATGCTATCACTAAAGGGAACTTAAAAAAGATCCTAATAGCTTGTGCTAAGGCCGTGTCCGATAATGATGCCTTAATGGCGCAATGGCTTATGGATGAACTGCGCAAGATGGTGTCGGTTCGGGGTGAACCGATGCAGAGATTGGGAGCTTATATGTTGGAGGGGCTGGTTGCACGGTCAGCCTTCTCAGGCAGTAGCATCTATAAATCTTTGAGATGCAAGGAACCAGCAAGCATGGAGCTCCTCTCTTATATGCATGTTTTGTACGATGTTTGCCCGTATTTCAAATTTGGATACATGTCTGCAAATGGTGCCATTGCAGAAGCCATGAAAGATGAAGATAGAGTACACATCATTGATTTCCAAATCTCTCAGGGTACTCAATGGATCACTTTGATTCAAGCTTTTGCAGGCAGGCCTGGTGGACCGCCTCACATTCGTATAACCGGCATAGATGATCCTGCATCAGCTCACGCTCGGGGAGGCGGTCTAGATATCGTTGGGATGAGGCTTTCTAAGTTAGCGAAGTTATTTAATGTCCCATTTGAGTTTCACTCGGCTGCCATCTCTGGCTGCGACGTTCAGCAGAAAGACTTGGGAATTCGACGAGGGGAGGCTTTAGCAGTGAACTTTGCATTCATGCTACACCATATGCCAGATGAGAGCGTAAGCACCGAAAACCATCGAGATCGGTTATTGAGGCTGGTTAAGGGTCTGTCTCCAAAGGTAGTGACCCTTGTTGAACAAGAATCCAACACGAACACCGCTGCGTTCTTTCCCCGGTTCATCGAGACGCTGGATTACTACAACGCCATGTTCGAATCAATCGACGTTACTCTTCCAAGGCAGCACAAGGAGCGAATCAACATCGAGCAGCATTGTCTAGCCAGGGAAGTTGTCAACATACTAGCATGTGAAGGGGCAGAGAGAGTAGAACGACACGAGCTACTCGGAAAGTGGCGACTGCGATTCTCAATGGCAGGATTCACTCCCTACCCATTAAGCTCTTTGGTGAATGCTACCATAAAAACGTTATTAGATAACTATTCTAACAGGTATAGGCTTGAAGAGAAAGAAGGGGCTCTATATCTAGGTTGGATGGATAGGGATTTGGTTGCTTCTTGTGCATGGAAGTGA

Coding sequence (CDS)

ATGCAAGCTTCTCAGCTTCATAGAGGTCAACATATGTCGAAAAGACTGTGTTATCAGCCACTTCAAGGAGTGGATGCCTACTGTGTCTCCCAATTTCAAACTTTAGGTCGCCAATTATATACCAATGCTGGCAACGAAAGAGCTCAGTTCAATCTTCAAGACATCAGTGATCGGTACTGCACTTTGGAATCGTCCTCGGGAAGCCACGGCTATGCAACTCACAACTCGACGTCGACGACCGTCACTTTCTCATCCAATGGGAGTCCTTCTGATCAGCATAATTCCCCTGACAATACGTATGGCTCACCAGTAAGCGGATCCTGCATAACAGATGATATTAGTGATTTTAGGCACAAACTGCTGGAATTGGAAACTGTGATGCTTGGCCCTGATTCTGATATTATTGATAGTTTTGATAGTTTCTACCAGGAAGGAACAGAGAATTCAGAAGTGGGAAGTTGGGGACAAGTGATGGATGCTATCACTAAAGGGAACTTAAAAAAGATCCTAATAGCTTGTGCTAAGGCCGTGTCCGATAATGATGCCTTAATGGCGCAATGGCTTATGGATGAACTGCGCAAGATGGTGTCGGTTCGGGGTGAACCGATGCAGAGATTGGGAGCTTATATGTTGGAGGGGCTGGTTGCACGGTCAGCCTTCTCAGGCAGTAGCATCTATAAATCTTTGAGATGCAAGGAACCAGCAAGCATGGAGCTCCTCTCTTATATGCATGTTTTGTACGATGTTTGCCCGTATTTCAAATTTGGATACATGTCTGCAAATGGTGCCATTGCAGAAGCCATGAAAGATGAAGATAGAGTACACATCATTGATTTCCAAATCTCTCAGGGTACTCAATGGATCACTTTGATTCAAGCTTTTGCAGGCAGGCCTGGTGGACCGCCTCACATTCGTATAACCGGCATAGATGATCCTGCATCAGCTCACGCTCGGGGAGGCGGTCTAGATATCGTTGGGATGAGGCTTTCTAAGTTAGCGAAGTTATTTAATGTCCCATTTGAGTTTCACTCGGCTGCCATCTCTGGCTGCGACGTTCAGCAGAAAGACTTGGGAATTCGACGAGGGGAGGCTTTAGCAGTGAACTTTGCATTCATGCTACACCATATGCCAGATGAGAGCGTAAGCACCGAAAACCATCGAGATCGGTTATTGAGGCTGGTTAAGGGTCTGTCTCCAAAGGTAGTGACCCTTGTTGAACAAGAATCCAACACGAACACCGCTGCGTTCTTTCCCCGGTTCATCGAGACGCTGGATTACTACAACGCCATGTTCGAATCAATCGACGTTACTCTTCCAAGGCAGCACAAGGAGCGAATCAACATCGAGCAGCATTGTCTAGCCAGGGAAGTTGTCAACATACTAGCATGTGAAGGGGCAGAGAGAGTAGAACGACACGAGCTACTCGGAAAGTGGCGACTGCGATTCTCAATGGCAGGATTCACTCCCTACCCATTAAGCTCTTTGGTGAATGCTACCATAAAAACGTTATTAGATAACTATTCTAACAGGTATAGGCTTGAAGAGAAAGAAGGGGCTCTATATCTAGGTTGGATGGATAGGGATTTGGTTGCTTCTTGTGCATGGAAGTGA

Protein sequence

MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYCTLESSSGSHGYATHNSTSTTVTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKLLELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDNDALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELLSYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGGPPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRLRFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK

Homology

[Close]

BLAST of Cp4.1LG05g13900 vs. ExPASy Swiss-Prot
Match: Q9LDL7 (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1 PE=1 SV=1)

HSP 1 Score: 673.3 bits (1736), Expect = 2.2e-192
Identity = 344/524 (65.65%), Postives = 411/524 (78.44%), Query Frame = 0


Query: 19  QPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYCTLESSSGSHGYATHNSTS 78
           QP Q ++AY      ++ +  Y    N R          R+CTLE    S  Y   N+ S
Sbjct: 4   QPRQELEAYYFEP-NSVEKLRYLPVNNSR---------KRFCTLEPFPDSPPY---NALS 63

Query: 79  TTVTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKLLELETVMLGPDS-----D 138
           T                   TY     GSC+TD+++DF+HK+ E+ETVM+GPDS     D
Sbjct: 64  TA------------------TY-DDTCGSCVTDELNDFKHKIREIETVMMGPDSLDLLVD 123

Query: 139 IIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDNDALMAQWLMDELR 198
             DSFDS     T + E+  W   ++AI++ +L+  L++CAKA+S+ND +MA  +M++LR
Sbjct: 124 CTDSFDS-----TASQEINGWRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLR 183

Query: 199 KMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSL-RCKEPASMELLSYMHVLYDVCPY 258
           +MVSV GEP+QRLGAY+LEGLVA+ A SGSSIYK+L RC EPAS ELLSYMH+LY+VCPY
Sbjct: 184 QMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSYMHILYEVCPY 243

Query: 259 FKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGGPPHIRITGIDDP 318
           FKFGYMSANGAIAEAMK+E+RVHIIDFQI QG+QW+TLIQAFA RPGGPP IRITGIDD 
Sbjct: 244 FKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDM 303

Query: 319 ASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIRRGEALAVNFAFM 378
            SA+ARGGGL IVG RL+KLAK FNVPFEF+S ++S  +V+ K+LG+R GEALAVNFAF+
Sbjct: 304 TSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFV 363

Query: 379 LHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRFIETLDYYNAMFE 438
           LHHMPDESVSTENHRDRLLR+VK LSPKVVTLVEQESNTNTAAFFPRF+ET++YY AMFE
Sbjct: 364 LHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFE 423

Query: 439 SIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRLRFSMAGFTPYPL 498
           SIDVTLPR HK+RIN+EQHCLAR+VVNI+ACEGA+RVERHELLGKWR RF MAGFTPYPL
Sbjct: 424 SIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPL 483

Query: 499 SSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 537
           S LVN+TIK+LL NYS++YRLEE++GALYLGWM RDLVASCAWK
Sbjct: 484 SPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490

[Close]

BLAST of Cp4.1LG05g13900 vs. ExPASy Swiss-Prot
Match: Q8GVE1 (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR2 PE=2 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 9.2e-170
Identity = 304/489 (62.17%), Postives = 375/489 (76.69%), Query Frame = 0


Query: 48  AQFNLQDISDRYCTLESSSGSHGYATHNSTSTTVTFSSNGSPSDQHNS-PDNTYGSPVSG 107
           A +  Q   ++Y TL+SS G+ G   H+S S+    + +GSP  Q +S  D+T GSPV  
Sbjct: 59  AGYESQATPNKY-TLDSSEGA-GCMRHDSPSSQSFTTRSGSPLSQEDSHSDSTDGSPVGA 118

Query: 108 SCITDDISDFRHKLLELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNL 167
           SC+T+D +D + KL +LE VMLGPDS+I++S ++       + E   W ++M  I +GNL
Sbjct: 119 SCVTEDPNDLKQKLKDLEAVMLGPDSEIVNSLENSVANQL-SLEPEKWVRMM-GIPRGNL 178

Query: 168 KKILIACAKAVSDNDALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIY 227
           K++LIACA+AV + ++     ++ ELRK+VSV GEP++RLGAYM+EGLVAR A SG SIY
Sbjct: 179 KELLIACARAVEEKNSFAIDMMIPELRKIVSVSGEPLERLGAYMVEGLVARLASSGISIY 238

Query: 228 KSLRCKEPASMELLSYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQ 287
           K+L+CKEP S +LLSYMH LY+ CPYFKFGYMSANGAIAEA+K EDR+HIIDF ISQG Q
Sbjct: 239 KALKCKEPKSSDLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQGAQ 298

Query: 288 WITLIQAFAGRPGGPPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAA 347
           WI+L+QA A RPGGPP +RITGIDD  SA+ARGGGL++VG RLS +A L  VPFEFH  A
Sbjct: 299 WISLLQALAARPGGPPTVRITGIDDSVSAYARGGGLELVGRRLSHIASLCKVPFEFHPLA 358

Query: 348 ISGCDVQQKDLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVE 407
           ISG  V+   LG+  GEALAVNF   LHH+PDESVST NHRDRLLR+VK LSPKV+TLVE
Sbjct: 359 ISGSKVEAAHLGVIPGEALAVNFTLELHHIPDESVSTANHRDRLLRMVKSLSPKVLTLVE 418

Query: 408 QESNTNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGA 467
            ESNTNTA F  RF ETLDYY A+FESID+TLPR  +ERIN+EQHCLARE+VN++ACEG 
Sbjct: 419 MESNTNTAPFPQRFAETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACEGE 478

Query: 468 ERVERHELLGKWRLRFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMD 527
           ER ER+E  GKW+ R +MAGF P PLSSLVNATI+TLL +YS+ Y+L E++GALYLGW  
Sbjct: 479 ERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQSYSDNYKLAERDGALYLGWKS 538

Query: 528 RDLVASCAW 536
           R LV S AW
Sbjct: 539 RPLVVSSAW 543

[Close]

BLAST of Cp4.1LG05g13900 vs. ExPASy Swiss-Prot
Match: Q8H125 (Scarecrow-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SCL5 PE=1 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 2.7e-169
Identity = 304/495 (61.41%), Postives = 378/495 (76.36%), Query Frame = 0


Query: 57  DRYCTLESSSGSHGYA---THNSTSTTVTFSSNGSPSDQHN----------SPDNTYGSP 116
           D YCTLESSSG+  +      N++S+T +FSSN SP  Q N          SP+    SP
Sbjct: 105 DSYCTLESSSGTKSHPCLNNKNNSSSTTSFSSNESPISQANNNNLSRFNNHSPEENNNSP 164

Query: 117 VSGSCITD-DISDFRHKLLELETVMLGPDSDIIDSFDSFYQEGTENSEVGS-WGQVMDAI 176
           +SGS  T+ + ++    L +LET M+ PD D  +S+++    G ++  V S   + M+ I
Sbjct: 165 LSGSSATNTNETELSLMLKDLETAMMEPDVD--NSYNNQGGFGQQHGVVSSAMYRSMEMI 224

Query: 177 TKGNLKKILIACAKAVSDNDALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFS 236
           ++G+LK +L  CAKAV + D  M  WL+ +L++MVSV GEP+QRLGAYMLEGLVAR A S
Sbjct: 225 SRGDLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASS 284

Query: 237 GSSIYKSLRCKEPASMELLSYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQI 296
           GSSIYK+LRCK+P   ELL+YMH+LY+ CPYFKFGY SANGAIAEA+K+E  VHIIDFQI
Sbjct: 285 GSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQI 344

Query: 297 SQGTQWITLIQAFAGRPGGPPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFE 356
           SQG QW++LI+A   RPGGPP++RITGIDDP S+ AR GGL++VG RL KLA++  VPFE
Sbjct: 345 SQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFE 404

Query: 357 FHSAAISGCDVQQKDLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKV 416
           FH AA+   +V+ + LG+R GEALAVNF  +LHHMPDESV+ ENHRDRLLRLVK LSP V
Sbjct: 405 FHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNV 464

Query: 417 VTLVEQESNTNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNIL 476
           VTLVEQE+NTNTA F PRF+ET+++Y A+FESIDV L R HKERIN+EQHCLAREVVN++
Sbjct: 465 VTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLI 524

Query: 477 ACEGAERVERHELLGKWRLRFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALY 536
           ACEG ER ERHE LGKWR RF MAGF PYPLSS VNATIK LL++YS +Y LEE++GALY
Sbjct: 525 ACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALY 584

[Close]

BLAST of Cp4.1LG05g13900 vs. ExPASy Swiss-Prot
Match: Q9S7H5 (Scarecrow-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=SCL21 PE=1 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 3.5e-161
Identity = 279/419 (66.59%), Postives = 336/419 (80.19%), Query Frame = 0


Query: 125 TVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQ-------VMDAITKGNLKKILIACAKAV 184
           ++ML P  +I +S D          E+  W         +++AI++G+LK +L+ACAKAV
Sbjct: 7   SIMLQPLPEIAESIDDAICH-----ELSMWPDDAKDLLLIVEAISRGDLKLVLVACAKAV 66

Query: 185 SDNDALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASM 244
           S+N+ LMA+W M ELR MVS+ GEP+QRLGAYMLEGLVAR A SGSSIYKSL+ +EP S 
Sbjct: 67  SENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESY 126

Query: 245 ELLSYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGR 304
           E LSY++VL++VCPYFKFGYMSANGAIAEAMKDE+R+HIIDFQI QG+QWI LIQAFA R
Sbjct: 127 EFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAAR 186

Query: 305 PGGPPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDL 364
           PGG P+IRITG+ D       G  L  V  RL KLAK F+VPF F++ +   C+V+ ++L
Sbjct: 187 PGGAPNIRITGVGD-------GSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENL 246

Query: 365 GIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFF 424
            +R GEAL VNFA+MLHH+PDESVS ENHRDRLLR+VK LSPKVVTLVEQE NTNT+ F 
Sbjct: 247 DVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFL 306

Query: 425 PRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGK 484
           PRF+ETL YY AMFESIDV LPR HKERINIEQHC+AR+VVNI+ACEGAER+ERHELLGK
Sbjct: 307 PRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGK 366

Query: 485 WRLRFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 537
           W+ RFSMAGF PYPLSS+++ATI+ LL +YSN Y +EE++GALYLGWMDR LV+SCAWK
Sbjct: 367 WKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK 413

[Close]

BLAST of Cp4.1LG05g13900 vs. ExPASy Swiss-Prot
Match: Q9M0M5 (Scarecrow-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=SCL13 PE=2 SV=2)

HSP 1 Score: 503.8 bits (1296), Expect = 2.4e-141
Identity = 270/548 (49.27%), Postives = 356/548 (64.96%), Query Frame = 0


Query: 1   MQASQLHR---GQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISD 60
           MQ SQ H    G HM              YC  QFQ    + +++  ++          +
Sbjct: 1   MQTSQKHHSAAGLHMLY---------PQVYCSPQFQAKDNKGFSDIPSK----------E 60

Query: 61  RYCTLESSSGSHGYATHNSTSTTVT-----FSSNGSP---SDQHNSPDNTYGSPVSG-SC 120
            + TLESS+ S    +++S S ++T     FS  GS    SD H+SPDN YGSP+SG S 
Sbjct: 61  NFFTLESSTASGSLPSYDSPSVSITSGRSPFSPQGSQSCISDLHHSPDNVYGSPLSGVSS 120

Query: 121 ITDDISDFRHKLLELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKK 180
           +  D +  + K+ ELE  +L  D+  ++ F  F     ++    +W +++    + +LK+
Sbjct: 121 LAYDEAGVKSKIRELEVSLLSGDTK-VEEFSGFSPAAGKS---WNWDELLALTPQLDLKE 180

Query: 181 ILIACAKAVSDNDALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKS 240
           +L+  A+AV+D D   A   +D L +MVSV G P+QRLG YM EGL AR   SGS+IYKS
Sbjct: 181 VLVEAARAVADGDFATAYGFLDVLEQMVSVSGSPIQRLGTYMAEGLRARLEGSGSNIYKS 240

Query: 241 LRCKEPASMELLSYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWI 300
           L+C EP   EL+SYM VLY++CPY+KF Y +AN  I EA+  E RVHIIDFQI+QG+Q++
Sbjct: 241 LKCNEPTGRELMSYMSVLYEICPYWKFAYTTANVEILEAIAGETRVHIIDFQIAQGSQYM 300

Query: 301 TLIQAFAGRPGGPPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAIS 360
            LIQ  A RPGGPP +R+TG+DD  S +ARGGGL +VG RL+ LA+   VPFEFH A +S
Sbjct: 301 FLIQELAKRPGGPPLLRVTGVDDSQSTYARGGGLSLVGERLATLAQSCGVPFEFHDAIMS 360

Query: 361 GCDVQQKDLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQE 420
           GC VQ++ LG+  G A+ VNF ++LHHMPDESVS ENHRDRLL L+K LSPK+VTLVEQE
Sbjct: 361 GCKVQREHLGLEPGFAVVVNFPYVLHHMPDESVSVENHRDRLLHLIKSLSPKLVTLVEQE 420

Query: 421 SNTNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAER 480
           SNTNT+ F  RF+ETLDYY AMFESID   PR  K+RI+ EQHC+AR++VN++ACE +ER
Sbjct: 421 SNTNTSPFLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHCVARDIVNMIACEESER 480

Query: 481 VERHELLGKWRLRFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRD 537
           VERHE+LGKWR+R  MAGFT +P+S+        +L  Y   Y+L   EGALYL W  R 
Sbjct: 481 VERHEVLGKWRVRMMMAGFTGWPVSTSAAFAASEMLKAYDKNYKLGGHEGALYLFWKRRP 525

[Close]

BLAST of Cp4.1LG05g13900 vs. NCBI nr
Match: XP_023533808.1 (scarecrow-like transcription factor PAT1 [Cucurbita pepo subsp. pepo] >XP_023533809.1 scarecrow-like transcription factor PAT1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1073 bits (2776), Expect = 0.0
Identity = 536/536 (100.00%), Postives = 536/536 (100.00%), Query Frame = 0


Query: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60
           MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC
Sbjct: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60

Query: 61  TLESSSGSHGYATHNSTSTTVTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL 120
           TLESSSGSHGYATHNSTSTTVTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL
Sbjct: 61  TLESSSGSHGYATHNSTSTTVTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL 120

Query: 121 LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN 180
           LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN
Sbjct: 121 LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN 180

Query: 181 DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL 240
           DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL
Sbjct: 181 DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL 240

Query: 241 SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG 300
           SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG
Sbjct: 241 SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG 300

Query: 301 PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR 360
           PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR
Sbjct: 301 PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR 360

Query: 361 RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF 420
           RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF
Sbjct: 361 RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF 420

Query: 421 IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL 480
           IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL
Sbjct: 421 IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL 480

Query: 481 RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 536
           RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK
Sbjct: 481 RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 536

[Close]

BLAST of Cp4.1LG05g13900 vs. NCBI nr
Match: XP_022970979.1 (scarecrow-like transcription factor PAT1 [Cucurbita maxima] >XP_022970980.1 scarecrow-like transcription factor PAT1 [Cucurbita maxima] >XP_022970982.1 scarecrow-like transcription factor PAT1 [Cucurbita maxima])

HSP 1 Score: 1067 bits (2759), Expect = 0.0
Identity = 531/536 (99.07%), Postives = 534/536 (99.63%), Query Frame = 0


Query: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60
           MQASQL+RGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC
Sbjct: 1   MQASQLYRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60

Query: 61  TLESSSGSHGYATHNSTSTTVTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL 120
           TLESSSGSHGYA HNSTSTT+TFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL
Sbjct: 61  TLESSSGSHGYANHNSTSTTITFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL 120

Query: 121 LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN 180
           LELETVMLGPDSDI+DSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN
Sbjct: 121 LELETVMLGPDSDIVDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN 180

Query: 181 DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL 240
           DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARS FSGSSIYKSLRCKEPASMELL
Sbjct: 181 DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSTFSGSSIYKSLRCKEPASMELL 240

Query: 241 SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG 300
           SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG
Sbjct: 241 SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG 300

Query: 301 PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR 360
           PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR
Sbjct: 301 PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR 360

Query: 361 RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF 420
           RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF
Sbjct: 361 RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF 420

Query: 421 IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL 480
           IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL
Sbjct: 421 IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL 480

Query: 481 RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 536
           RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK
Sbjct: 481 RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 536

[Close]

BLAST of Cp4.1LG05g13900 vs. NCBI nr
Match: KAG6604904.1 (Scarecrow-like transcription factor PAT1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026986.1 Scarecrow-like transcription factor PAT1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1059 bits (2739), Expect = 0.0
Identity = 531/536 (99.07%), Postives = 534/536 (99.63%), Query Frame = 0


Query: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60
           MQASQLHRGQHMSKRLCYQPLQGVDA+CVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC
Sbjct: 1   MQASQLHRGQHMSKRLCYQPLQGVDAFCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60

Query: 61  TLESSSGSHGYATHNSTSTTVTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL 120
           TLESSSGSHGYAT +STST VTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL
Sbjct: 61  TLESSSGSHGYATRSSTST-VTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL 120

Query: 121 LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN 180
           LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN
Sbjct: 121 LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN 180

Query: 181 DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL 240
           DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL
Sbjct: 181 DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL 240

Query: 241 SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG 300
           SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG
Sbjct: 241 SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG 300

Query: 301 PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR 360
           PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQ+KDLGIR
Sbjct: 301 PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQKKDLGIR 360

Query: 361 RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF 420
           RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF
Sbjct: 361 RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF 420

Query: 421 IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL 480
           IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL
Sbjct: 421 IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL 480

Query: 481 RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 536
           RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK
Sbjct: 481 RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 535

[Close]

BLAST of Cp4.1LG05g13900 vs. NCBI nr
Match: XP_022947685.1 (scarecrow-like transcription factor PAT1 [Cucurbita moschata] >XP_022947686.1 scarecrow-like transcription factor PAT1 [Cucurbita moschata] >XP_022947687.1 scarecrow-like transcription factor PAT1 [Cucurbita moschata])

HSP 1 Score: 1058 bits (2736), Expect = 0.0
Identity = 531/536 (99.07%), Postives = 533/536 (99.44%), Query Frame = 0


Query: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60
           MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC
Sbjct: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60

Query: 61  TLESSSGSHGYATHNSTSTTVTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL 120
           TLESSSGSHGYAT +STST VTFSSNGSP+DQHNSPDNTYGSPVSGSCITDDISDFRHKL
Sbjct: 61  TLESSSGSHGYATRSSTST-VTFSSNGSPADQHNSPDNTYGSPVSGSCITDDISDFRHKL 120

Query: 121 LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN 180
           LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN
Sbjct: 121 LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN 180

Query: 181 DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL 240
           DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL
Sbjct: 181 DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL 240

Query: 241 SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG 300
           SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG
Sbjct: 241 SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG 300

Query: 301 PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR 360
           PPHIRITGIDDPASAHAR GGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR
Sbjct: 301 PPHIRITGIDDPASAHARRGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR 360

Query: 361 RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF 420
           RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF
Sbjct: 361 RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF 420

Query: 421 IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL 480
           IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL
Sbjct: 421 IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL 480

Query: 481 RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 536
           RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK
Sbjct: 481 RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 535

[Close]

BLAST of Cp4.1LG05g13900 vs. NCBI nr
Match: XP_038901243.1 (scarecrow-like transcription factor PAT1 [Benincasa hispida] >XP_038901245.1 scarecrow-like transcription factor PAT1 [Benincasa hispida] >XP_038901246.1 scarecrow-like transcription factor PAT1 [Benincasa hispida] >XP_038901247.1 scarecrow-like transcription factor PAT1 [Benincasa hispida] >XP_038901248.1 scarecrow-like transcription factor PAT1 [Benincasa hispida] >XP_038901249.1 scarecrow-like transcription factor PAT1 [Benincasa hispida] >XP_038901250.1 scarecrow-like transcription factor PAT1 [Benincasa hispida] >XP_038901251.1 scarecrow-like transcription factor PAT1 [Benincasa hispida])

HSP 1 Score: 989 bits (2556), Expect = 0.0
Identity = 497/546 (91.03%), Postives = 513/546 (93.96%), Query Frame = 0


Query: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60
           MQASQLHRG HMSKRLCYQPLQ VDAYC SQFQ+ GRQLY+NAGN+RAQFN+QDI DRYC
Sbjct: 1   MQASQLHRGSHMSKRLCYQPLQEVDAYCFSQFQSFGRQLYSNAGNQRAQFNVQDIGDRYC 60

Query: 61  TLESSSGSHGYATHNSTSTTVTFSSNGSP----------SDQHNSPDNTYGSPVSGSCIT 120
           TLESSSGSH YA HNSTST VTFS NGSP          SDQHNSPDNTYGS VSGS IT
Sbjct: 61  TLESSSGSHSYAAHNSTST-VTFSPNGSPVSQQDSRSNPSDQHNSPDNTYGSSVSGSSIT 120

Query: 121 DDISDFRHKLLELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKIL 180
           DDI+DFRHKLLELET MLGPDSD+IDSFDS YQEGT+N E+G+WGQVMDAITKGNLKKIL
Sbjct: 121 DDINDFRHKLLELETAMLGPDSDVIDSFDSIYQEGTDNLEMGTWGQVMDAITKGNLKKIL 180

Query: 181 IACAKAVSDNDALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLR 240
           IACAKAVSDNDALMAQWLMDELRKMVSV GEPMQRLGAYMLEGLVAR A SGS IYKSLR
Sbjct: 181 IACAKAVSDNDALMAQWLMDELRKMVSVCGEPMQRLGAYMLEGLVARLASSGSCIYKSLR 240

Query: 241 CKEPASMELLSYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITL 300
           CKEPA  ELLSYMH+LY+VCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITL
Sbjct: 241 CKEPARSELLSYMHLLYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITL 300

Query: 301 IQAFAGRPGGPPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGC 360
           IQAFAGRPGGPPHIRITGIDDPASA+ARGGGLDIVG RLSKLAKLFNVPFEFHSAAISGC
Sbjct: 301 IQAFAGRPGGPPHIRITGIDDPASAYARGGGLDIVGKRLSKLAKLFNVPFEFHSAAISGC 360

Query: 361 DVQQKDLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESN 420
           DVQQ +LGIRRGE+LAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESN
Sbjct: 361 DVQQNNLGIRRGESLAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESN 420

Query: 421 TNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVE 480
           TNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVE
Sbjct: 421 TNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVE 480

Query: 481 RHELLGKWRLRFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLV 536
           RHELLGKWRLRF+MAGFTPYPLSSLVNATIKTLLDNYSNRYRLEE+EG LYLGWMDRDLV
Sbjct: 481 RHELLGKWRLRFAMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEREGGLYLGWMDRDLV 540

[Close]

BLAST of Cp4.1LG05g13900 vs. ExPASy TrEMBL
Match: A0A6J1I0P5 (scarecrow-like transcription factor PAT1 OS=Cucurbita maxima OX=3661 GN=LOC111469787 PE=3 SV=1)

HSP 1 Score: 1067 bits (2759), Expect = 0.0
Identity = 531/536 (99.07%), Postives = 534/536 (99.63%), Query Frame = 0


Query: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60
           MQASQL+RGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC
Sbjct: 1   MQASQLYRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60

Query: 61  TLESSSGSHGYATHNSTSTTVTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL 120
           TLESSSGSHGYA HNSTSTT+TFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL
Sbjct: 61  TLESSSGSHGYANHNSTSTTITFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL 120

Query: 121 LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN 180
           LELETVMLGPDSDI+DSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN
Sbjct: 121 LELETVMLGPDSDIVDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN 180

Query: 181 DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL 240
           DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARS FSGSSIYKSLRCKEPASMELL
Sbjct: 181 DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSTFSGSSIYKSLRCKEPASMELL 240

Query: 241 SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG 300
           SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG
Sbjct: 241 SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG 300

Query: 301 PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR 360
           PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR
Sbjct: 301 PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR 360

Query: 361 RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF 420
           RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF
Sbjct: 361 RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF 420

Query: 421 IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL 480
           IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL
Sbjct: 421 IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL 480

Query: 481 RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 536
           RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK
Sbjct: 481 RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 536

[Close]

BLAST of Cp4.1LG05g13900 vs. ExPASy TrEMBL
Match: A0A6J1G7L5 (scarecrow-like transcription factor PAT1 OS=Cucurbita moschata OX=3662 GN=LOC111451477 PE=3 SV=1)

HSP 1 Score: 1058 bits (2736), Expect = 0.0
Identity = 531/536 (99.07%), Postives = 533/536 (99.44%), Query Frame = 0


Query: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60
           MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC
Sbjct: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60

Query: 61  TLESSSGSHGYATHNSTSTTVTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKL 120
           TLESSSGSHGYAT +STST VTFSSNGSP+DQHNSPDNTYGSPVSGSCITDDISDFRHKL
Sbjct: 61  TLESSSGSHGYATRSSTST-VTFSSNGSPADQHNSPDNTYGSPVSGSCITDDISDFRHKL 120

Query: 121 LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN 180
           LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN
Sbjct: 121 LELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDN 180

Query: 181 DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL 240
           DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL
Sbjct: 181 DALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASMELL 240

Query: 241 SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG 300
           SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG
Sbjct: 241 SYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGG 300

Query: 301 PPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR 360
           PPHIRITGIDDPASAHAR GGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR
Sbjct: 301 PPHIRITGIDDPASAHARRGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIR 360

Query: 361 RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF 420
           RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF
Sbjct: 361 RGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRF 420

Query: 421 IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL 480
           IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL
Sbjct: 421 IETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRL 480

Query: 481 RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 536
           RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK
Sbjct: 481 RFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 535

[Close]

BLAST of Cp4.1LG05g13900 vs. ExPASy TrEMBL
Match: A0A0A0KA55 (GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G110820 PE=3 SV=1)

HSP 1 Score: 977 bits (2525), Expect = 0.0
Identity = 491/546 (89.93%), Postives = 510/546 (93.41%), Query Frame = 0


Query: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60
           MQASQLHRG HM+KRLCYQPLQ VDAY  SQFQ+LGRQLY+N GN+R  FN+QDI DRYC
Sbjct: 1   MQASQLHRGSHMAKRLCYQPLQEVDAYYFSQFQSLGRQLYSNVGNQRGHFNVQDIGDRYC 60

Query: 61  TLESSSGSHGYATHNSTSTTVTFSSNGSP----------SDQHNSPDNTYGSPVSGSCIT 120
           TLESSSGSHGYATHNSTST VTFS NGSP          SDQHNSPDNTYGS VSGS IT
Sbjct: 61  TLESSSGSHGYATHNSTST-VTFSPNGSPVSQQDYRSNPSDQHNSPDNTYGSSVSGSSIT 120

Query: 121 DDISDFRHKLLELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKIL 180
           DDISDFRHKLLELETVMLGPDSD+I SFDS YQEGT+N E+G+WGQVMDAITKGNLKKIL
Sbjct: 121 DDISDFRHKLLELETVMLGPDSDVIYSFDSIYQEGTDNPEMGTWGQVMDAITKGNLKKIL 180

Query: 181 IACAKAVSDNDALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLR 240
           IACAKAVSDNDALMAQWLMDELRKMVSV GEPMQRLGAYMLEGLVAR A SGS IYKSLR
Sbjct: 181 IACAKAVSDNDALMAQWLMDELRKMVSVCGEPMQRLGAYMLEGLVARLASSGSCIYKSLR 240

Query: 241 CKEPASMELLSYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITL 300
           CKEPA  ELLSYMH+LY+VCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQW+TL
Sbjct: 241 CKEPARAELLSYMHLLYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWVTL 300

Query: 301 IQAFAGRPGGPPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGC 360
           IQAFAGRPGGPPHIRITGIDDPASA+ARGGGLDIVG RLSKLAKLFNVPFEFHSA+ISGC
Sbjct: 301 IQAFAGRPGGPPHIRITGIDDPASAYARGGGLDIVGKRLSKLAKLFNVPFEFHSASISGC 360

Query: 361 DVQQKDLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESN 420
           +V Q +LGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVK LSPKVVTLVEQESN
Sbjct: 361 NVHQNNLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESN 420

Query: 421 TNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVE 480
           TNTAAFFPRF+ETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVE
Sbjct: 421 TNTAAFFPRFVETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVE 480

Query: 481 RHELLGKWRLRFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLV 536
           RHELLGKWRLRF +AGFTPYPLSSLVNATIKTLLDNYSNRYRLEE+EGALYLGWMDRDLV
Sbjct: 481 RHELLGKWRLRFGLAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEREGALYLGWMDRDLV 540

[Close]

BLAST of Cp4.1LG05g13900 vs. ExPASy TrEMBL
Match: A0A1S3CLC7 (scarecrow-like transcription factor PAT1 OS=Cucumis melo OX=3656 GN=LOC103502125 PE=3 SV=1)

HSP 1 Score: 976 bits (2522), Expect = 0.0
Identity = 493/546 (90.29%), Postives = 510/546 (93.41%), Query Frame = 0


Query: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60
           MQASQLHRG HM+KRLCYQPLQ VDA   SQFQ+LGRQLY+N GN+RA FN QDISD+YC
Sbjct: 1   MQASQLHRGSHMAKRLCYQPLQEVDACYFSQFQSLGRQLYSNVGNQRAHFNFQDISDQYC 60

Query: 61  TLESSSGSHGYATHNSTSTTVTFSSNGSP----------SDQHNSPDNTYGSPVSGSCIT 120
           TLESSSGSHGYA HNSTST +TFS N SP          SDQHNSPDNTYGS VSGS IT
Sbjct: 61  TLESSSGSHGYAAHNSTST-ITFSPNASPVSQQDSRSNPSDQHNSPDNTYGSSVSGSSIT 120

Query: 121 DDISDFRHKLLELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKIL 180
           DDISDFRHKLLELETVMLGPDSD+I SFDS YQEGT+N E+G+WGQVMDAITKGNLKKIL
Sbjct: 121 DDISDFRHKLLELETVMLGPDSDVIYSFDSIYQEGTDNPEMGTWGQVMDAITKGNLKKIL 180

Query: 181 IACAKAVSDNDALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLR 240
           IACAKAVSDNDALMAQWLMDELRKMVSV GEPMQRLGAYMLEGLVAR A SGS IYKSLR
Sbjct: 181 IACAKAVSDNDALMAQWLMDELRKMVSVCGEPMQRLGAYMLEGLVARLASSGSCIYKSLR 240

Query: 241 CKEPASMELLSYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITL 300
           CKEPA  ELLSYMH+LY+VCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQW+TL
Sbjct: 241 CKEPARAELLSYMHLLYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWVTL 300

Query: 301 IQAFAGRPGGPPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGC 360
           IQAFAGRPGGPP IRITGIDDPASA+ARGGGLDIVG RLSKLAKLFNVPFEFHSAAISGC
Sbjct: 301 IQAFAGRPGGPPRIRITGIDDPASAYARGGGLDIVGKRLSKLAKLFNVPFEFHSAAISGC 360

Query: 361 DVQQKDLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESN 420
           DVQQK+LGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESN
Sbjct: 361 DVQQKNLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESN 420

Query: 421 TNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVE 480
           TNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVE
Sbjct: 421 TNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVE 480

Query: 481 RHELLGKWRLRFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLV 536
           RHELLGKWRLRF MAGFTPYPLSSLVNATIKTLLDNYSNRYRLEE+EGALYLGWM+RDLV
Sbjct: 481 RHELLGKWRLRFDMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEREGALYLGWMNRDLV 540

[Close]

BLAST of Cp4.1LG05g13900 vs. ExPASy TrEMBL
Match: A0A5D3CK39 (Scarecrow-like transcription factor PAT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00700 PE=3 SV=1)

HSP 1 Score: 976 bits (2522), Expect = 0.0
Identity = 493/546 (90.29%), Postives = 510/546 (93.41%), Query Frame = 0


Query: 1   MQASQLHRGQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYC 60
           MQASQLHRG HM+KRLCYQPLQ VDA   SQFQ+LGRQLY+N GN+RA FN QDISD+YC
Sbjct: 1   MQASQLHRGSHMAKRLCYQPLQEVDACYFSQFQSLGRQLYSNVGNQRAHFNFQDISDQYC 60

Query: 61  TLESSSGSHGYATHNSTSTTVTFSSNGSP----------SDQHNSPDNTYGSPVSGSCIT 120
           TLESSSGSHGYA HNSTST +TFS N SP          SDQHNSPDNTYGS VSGS IT
Sbjct: 61  TLESSSGSHGYAAHNSTST-ITFSPNASPVSQQDSRSNPSDQHNSPDNTYGSSVSGSSIT 120

Query: 121 DDISDFRHKLLELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKIL 180
           DDISDFRHKLLELETVMLGPDSD+I SFDS YQEGT+N E+G+WGQVMDAITKGNLKKIL
Sbjct: 121 DDISDFRHKLLELETVMLGPDSDVIYSFDSIYQEGTDNPEMGTWGQVMDAITKGNLKKIL 180

Query: 181 IACAKAVSDNDALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLR 240
           IACAKAVSDNDALMAQWLMDELRKMVSV GEPMQRLGAYMLEGLVAR A SGS IYKSLR
Sbjct: 181 IACAKAVSDNDALMAQWLMDELRKMVSVCGEPMQRLGAYMLEGLVARLASSGSCIYKSLR 240

Query: 241 CKEPASMELLSYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITL 300
           CKEPA  ELLSYMH+LY+VCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQW+TL
Sbjct: 241 CKEPARAELLSYMHLLYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWVTL 300

Query: 301 IQAFAGRPGGPPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGC 360
           IQAFAGRPGGPP IRITGIDDPASA+ARGGGLDIVG RLSKLAKLFNVPFEFHSAAISGC
Sbjct: 301 IQAFAGRPGGPPRIRITGIDDPASAYARGGGLDIVGKRLSKLAKLFNVPFEFHSAAISGC 360

Query: 361 DVQQKDLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESN 420
           DVQQK+LGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESN
Sbjct: 361 DVQQKNLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESN 420

Query: 421 TNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVE 480
           TNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVE
Sbjct: 421 TNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVE 480

Query: 481 RHELLGKWRLRFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLV 536
           RHELLGKWRLRF MAGFTPYPLSSLVNATIKTLLDNYSNRYRLEE+EGALYLGWM+RDLV
Sbjct: 481 RHELLGKWRLRFDMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEREGALYLGWMNRDLV 540

[Close]

BLAST of Cp4.1LG05g13900 vs. TAIR 10
Match: AT5G48150.1 (GRAS family transcription factor )

HSP 1 Score: 673.3 bits (1736), Expect = 1.6e-193
Identity = 344/524 (65.65%), Postives = 411/524 (78.44%), Query Frame = 0


Query: 19  QPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYCTLESSSGSHGYATHNSTS 78
           QP Q ++AY      ++ +  Y    N R          R+CTLE    S  Y   N+ S
Sbjct: 4   QPRQELEAYYFEP-NSVEKLRYLPVNNSR---------KRFCTLEPFPDSPPY---NALS 63

Query: 79  TTVTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKLLELETVMLGPDS-----D 138
           T                   TY     GSC+TD+++DF+HK+ E+ETVM+GPDS     D
Sbjct: 64  TA------------------TY-DDTCGSCVTDELNDFKHKIREIETVMMGPDSLDLLVD 123

Query: 139 IIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDNDALMAQWLMDELR 198
             DSFDS     T + E+  W   ++AI++ +L+  L++CAKA+S+ND +MA  +M++LR
Sbjct: 124 CTDSFDS-----TASQEINGWRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLR 183

Query: 199 KMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSL-RCKEPASMELLSYMHVLYDVCPY 258
           +MVSV GEP+QRLGAY+LEGLVA+ A SGSSIYK+L RC EPAS ELLSYMH+LY+VCPY
Sbjct: 184 QMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSYMHILYEVCPY 243

Query: 259 FKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGGPPHIRITGIDDP 318
           FKFGYMSANGAIAEAMK+E+RVHIIDFQI QG+QW+TLIQAFA RPGGPP IRITGIDD 
Sbjct: 244 FKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDM 303

Query: 319 ASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIRRGEALAVNFAFM 378
            SA+ARGGGL IVG RL+KLAK FNVPFEF+S ++S  +V+ K+LG+R GEALAVNFAF+
Sbjct: 304 TSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFV 363

Query: 379 LHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRFIETLDYYNAMFE 438
           LHHMPDESVSTENHRDRLLR+VK LSPKVVTLVEQESNTNTAAFFPRF+ET++YY AMFE
Sbjct: 364 LHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFE 423

Query: 439 SIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRLRFSMAGFTPYPL 498
           SIDVTLPR HK+RIN+EQHCLAR+VVNI+ACEGA+RVERHELLGKWR RF MAGFTPYPL
Sbjct: 424 SIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPL 483

Query: 499 SSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 537
           S LVN+TIK+LL NYS++YRLEE++GALYLGWM RDLVASCAWK
Sbjct: 484 SPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490

[Close]

BLAST of Cp4.1LG05g13900 vs. TAIR 10
Match: AT5G48150.2 (GRAS family transcription factor )

HSP 1 Score: 673.3 bits (1736), Expect = 1.6e-193
Identity = 344/524 (65.65%), Postives = 411/524 (78.44%), Query Frame = 0


Query: 19  QPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISDRYCTLESSSGSHGYATHNSTS 78
           QP Q ++AY      ++ +  Y    N R          R+CTLE    S  Y   N+ S
Sbjct: 4   QPRQELEAYYFEP-NSVEKLRYLPVNNSR---------KRFCTLEPFPDSPPY---NALS 63

Query: 79  TTVTFSSNGSPSDQHNSPDNTYGSPVSGSCITDDISDFRHKLLELETVMLGPDS-----D 138
           T                   TY     GSC+TD+++DF+HK+ E+ETVM+GPDS     D
Sbjct: 64  TA------------------TY-DDTCGSCVTDELNDFKHKIREIETVMMGPDSLDLLVD 123

Query: 139 IIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKKILIACAKAVSDNDALMAQWLMDELR 198
             DSFDS     T + E+  W   ++AI++ +L+  L++CAKA+S+ND +MA  +M++LR
Sbjct: 124 CTDSFDS-----TASQEINGWRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLR 183

Query: 199 KMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSL-RCKEPASMELLSYMHVLYDVCPY 258
           +MVSV GEP+QRLGAY+LEGLVA+ A SGSSIYK+L RC EPAS ELLSYMH+LY+VCPY
Sbjct: 184 QMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSYMHILYEVCPY 243

Query: 259 FKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGGPPHIRITGIDDP 318
           FKFGYMSANGAIAEAMK+E+RVHIIDFQI QG+QW+TLIQAFA RPGGPP IRITGIDD 
Sbjct: 244 FKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDM 303

Query: 319 ASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDLGIRRGEALAVNFAFM 378
            SA+ARGGGL IVG RL+KLAK FNVPFEF+S ++S  +V+ K+LG+R GEALAVNFAF+
Sbjct: 304 TSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFV 363

Query: 379 LHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRFIETLDYYNAMFE 438
           LHHMPDESVSTENHRDRLLR+VK LSPKVVTLVEQESNTNTAAFFPRF+ET++YY AMFE
Sbjct: 364 LHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFE 423

Query: 439 SIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRLRFSMAGFTPYPL 498
           SIDVTLPR HK+RIN+EQHCLAR+VVNI+ACEGA+RVERHELLGKWR RF MAGFTPYPL
Sbjct: 424 SIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPL 483

Query: 499 SSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 537
           S LVN+TIK+LL NYS++YRLEE++GALYLGWM RDLVASCAWK
Sbjct: 484 SPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490

[Close]

BLAST of Cp4.1LG05g13900 vs. TAIR 10
Match: AT1G50600.1 (scarecrow-like 5 )

HSP 1 Score: 596.7 bits (1537), Expect = 1.9e-170
Identity = 304/495 (61.41%), Postives = 378/495 (76.36%), Query Frame = 0


Query: 57  DRYCTLESSSGSHGYA---THNSTSTTVTFSSNGSPSDQHN----------SPDNTYGSP 116
           D YCTLESSSG+  +      N++S+T +FSSN SP  Q N          SP+    SP
Sbjct: 105 DSYCTLESSSGTKSHPCLNNKNNSSSTTSFSSNESPISQANNNNLSRFNNHSPEENNNSP 164

Query: 117 VSGSCITD-DISDFRHKLLELETVMLGPDSDIIDSFDSFYQEGTENSEVGS-WGQVMDAI 176
           +SGS  T+ + ++    L +LET M+ PD D  +S+++    G ++  V S   + M+ I
Sbjct: 165 LSGSSATNTNETELSLMLKDLETAMMEPDVD--NSYNNQGGFGQQHGVVSSAMYRSMEMI 224

Query: 177 TKGNLKKILIACAKAVSDNDALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFS 236
           ++G+LK +L  CAKAV + D  M  WL+ +L++MVSV GEP+QRLGAYMLEGLVAR A S
Sbjct: 225 SRGDLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASS 284

Query: 237 GSSIYKSLRCKEPASMELLSYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQI 296
           GSSIYK+LRCK+P   ELL+YMH+LY+ CPYFKFGY SANGAIAEA+K+E  VHIIDFQI
Sbjct: 285 GSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQI 344

Query: 297 SQGTQWITLIQAFAGRPGGPPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFE 356
           SQG QW++LI+A   RPGGPP++RITGIDDP S+ AR GGL++VG RL KLA++  VPFE
Sbjct: 345 SQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFE 404

Query: 357 FHSAAISGCDVQQKDLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKV 416
           FH AA+   +V+ + LG+R GEALAVNF  +LHHMPDESV+ ENHRDRLLRLVK LSP V
Sbjct: 405 FHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNV 464

Query: 417 VTLVEQESNTNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNIL 476
           VTLVEQE+NTNTA F PRF+ET+++Y A+FESIDV L R HKERIN+EQHCLAREVVN++
Sbjct: 465 VTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLI 524

Query: 477 ACEGAERVERHELLGKWRLRFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALY 536
           ACEG ER ERHE LGKWR RF MAGF PYPLSS VNATIK LL++YS +Y LEE++GALY
Sbjct: 525 ACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALY 584

[Close]

BLAST of Cp4.1LG05g13900 vs. TAIR 10
Match: AT2G04890.1 (SCARECROW-like 21 )

HSP 1 Score: 569.7 bits (1467), Expect = 2.5e-162
Identity = 279/419 (66.59%), Postives = 336/419 (80.19%), Query Frame = 0


Query: 125 TVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQ-------VMDAITKGNLKKILIACAKAV 184
           ++ML P  +I +S D          E+  W         +++AI++G+LK +L+ACAKAV
Sbjct: 7   SIMLQPLPEIAESIDDAICH-----ELSMWPDDAKDLLLIVEAISRGDLKLVLVACAKAV 66

Query: 185 SDNDALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKSLRCKEPASM 244
           S+N+ LMA+W M ELR MVS+ GEP+QRLGAYMLEGLVAR A SGSSIYKSL+ +EP S 
Sbjct: 67  SENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESY 126

Query: 245 ELLSYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGR 304
           E LSY++VL++VCPYFKFGYMSANGAIAEAMKDE+R+HIIDFQI QG+QWI LIQAFA R
Sbjct: 127 EFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAAR 186

Query: 305 PGGPPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAISGCDVQQKDL 364
           PGG P+IRITG+ D       G  L  V  RL KLAK F+VPF F++ +   C+V+ ++L
Sbjct: 187 PGGAPNIRITGVGD-------GSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENL 246

Query: 365 GIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFF 424
            +R GEAL VNFA+MLHH+PDESVS ENHRDRLLR+VK LSPKVVTLVEQE NTNT+ F 
Sbjct: 247 DVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFL 306

Query: 425 PRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGK 484
           PRF+ETL YY AMFESIDV LPR HKERINIEQHC+AR+VVNI+ACEGAER+ERHELLGK
Sbjct: 307 PRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGK 366

Query: 485 WRLRFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRDLVASCAWK 537
           W+ RFSMAGF PYPLSS+++ATI+ LL +YSN Y +EE++GALYLGWMDR LV+SCAWK
Sbjct: 367 WKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK 413

[Close]

BLAST of Cp4.1LG05g13900 vs. TAIR 10
Match: AT4G17230.1 (SCARECROW-like 13 )

HSP 1 Score: 500.7 bits (1288), Expect = 1.4e-141
Identity = 269/548 (49.09%), Postives = 355/548 (64.78%), Query Frame = 0


Query: 1   MQASQLHR---GQHMSKRLCYQPLQGVDAYCVSQFQTLGRQLYTNAGNERAQFNLQDISD 60
           MQ SQ H    G HM              YC  QFQ    + +++  ++          +
Sbjct: 1   MQTSQKHHSAAGLHMLY---------PQVYCSPQFQAKDNKGFSDIPSK----------E 60

Query: 61  RYCTLESSSGSHGYATHNSTSTTVT-----FSSNGSP---SDQHNSPDNTYGSPVSG-SC 120
            + TLESS+ S    +++S S ++T     FS  GS    SD H+SPDN YGSP+SG S 
Sbjct: 61  NFFTLESSTASGSLPSYDSPSVSITSGRSPFSPQGSQSCISDLHHSPDNVYGSPLSGVSS 120

Query: 121 ITDDISDFRHKLLELETVMLGPDSDIIDSFDSFYQEGTENSEVGSWGQVMDAITKGNLKK 180
           +  D +  + K+ ELE  +L  D+  ++ F  F     ++    +W +++    + +LK+
Sbjct: 121 LAYDEAGVKSKIRELEVSLLSGDTK-VEEFSGFSPAAGKS---WNWDELLALTPQLDLKE 180

Query: 181 ILIACAKAVSDNDALMAQWLMDELRKMVSVRGEPMQRLGAYMLEGLVARSAFSGSSIYKS 240
           +L+  A+AV+D D   A   +D L +MVSV G P+QRLG YM EGL AR   SGS+IYKS
Sbjct: 181 VLVEAARAVADGDFATAYGFLDVLEQMVSVSGSPIQRLGTYMAEGLRARLEGSGSNIYKS 240

Query: 241 LRCKEPASMELLSYMHVLYDVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWI 300
           L+C EP   EL+SYM VLY++CPY+KF Y +AN  I EA+  E RVHIIDFQI+QG+Q++
Sbjct: 241 LKCNEPTGRELMSYMSVLYEICPYWKFAYTTANVEILEAIAGETRVHIIDFQIAQGSQYM 300

Query: 301 TLIQAFAGRPGGPPHIRITGIDDPASAHARGGGLDIVGMRLSKLAKLFNVPFEFHSAAIS 360
            LIQ  A RPGGPP +R+TG+DD  S +ARGGGL +VG RL+ LA+   VPFEFH A +S
Sbjct: 301 FLIQELAKRPGGPPLLRVTGVDDSQSTYARGGGLSLVGERLATLAQSCGVPFEFHDAIMS 360

Query: 361 GCDVQQKDLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQE 420
           GC VQ++ LG+  G A+ VNF ++LHHMPDESVS ENHRDRLL L+K LSPK+VTLVEQE
Sbjct: 361 GCKVQREHLGLEPGFAVVVNFPYVLHHMPDESVSVENHRDRLLHLIKSLSPKLVTLVEQE 420

Query: 421 SNTNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAER 480
           SNTNT+ F  RF+ETLDYY AMFESID   PR  K+RI+ EQHC+AR++VN++ACE +ER
Sbjct: 421 SNTNTSPFLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHCVARDIVNMIACEESER 480

Query: 481 VERHELLGKWRLRFSMAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEKEGALYLGWMDRD 537
           VERHE+LG WR+R  MAGFT +P+S+        +L  Y   Y+L   EGALYL W  R 
Sbjct: 481 VERHEVLGIWRVRMMMAGFTGWPVSTSAAFAASEMLKAYDKNYKLGGHEGALYLFWKRRP 525

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g13900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDL7	2.2e-192	65.65	Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1...	[more]
Q8GVE1	9.2e-170	62.17	Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonic...	[more]
Q8H125	2.7e-169	61.41	Scarecrow-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SCL5 PE=1 SV=1	[more]
Q9S7H5	3.5e-161	66.59	Scarecrow-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=SCL21 PE=1 SV=1	[more]
Q9M0M5	2.4e-141	49.27	Scarecrow-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=SCL13 PE=2 SV=2	[more]

BLAST of Cp4.1LG05g13900 vs. NCBI nr


Match Name	Identity	Description
XP_023533808.1	100.00	scarecrow-like transcription factor PAT1 [Cucurbita pepo subsp. pepo] >XP_023533...	[more]
XP_022970979.1	99.07	scarecrow-like transcription factor PAT1 [Cucurbita maxima] >XP_022970980.1 scar...	[more]
KAG6604904.1	99.07	Scarecrow-like transcription factor PAT1, partial [Cucurbita argyrosperma subsp....	[more]
XP_022947685.1	99.07	scarecrow-like transcription factor PAT1 [Cucurbita moschata] >XP_022947686.1 sc...	[more]
XP_038901243.1	91.03	scarecrow-like transcription factor PAT1 [Benincasa hispida] >XP_038901245.1 sca...	[more]

BLAST of Cp4.1LG05g13900 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1I0P5	99.07	scarecrow-like transcription factor PAT1 OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A6J1G7L5	99.07	scarecrow-like transcription factor PAT1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0KA55	89.93	GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G110820 PE=3 S...	[more]
A0A1S3CLC7	90.29	scarecrow-like transcription factor PAT1 OS=Cucumis melo OX=3656 GN=LOC103502125...	[more]
A0A5D3CK39	90.29	Scarecrow-like transcription factor PAT1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Cp4.1LG05g13900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48150.1	1.6e-193	65.65	GRAS family transcription factor	[more]
AT5G48150.2	1.6e-193	65.65	GRAS family transcription factor	[more]
AT1G50600.1	1.9e-170	61.41	scarecrow-like 5	[more]
AT2G04890.1	2.5e-162	66.59	SCARECROW-like 21	[more]
AT4G17230.1	1.4e-141	49.09	SCARECROW-like 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 166..536 e-value: 1.6E-134 score: 448.6
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 18..536
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 157..536 score: 100.885452
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..104
None	No IPR available	PANTHER	PTHR31636:SF18	SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1	coord: 18..536

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g13900.1	Cp4.1LG05g13900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding