Cp4.1LG05g13870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g13870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	SNF1-related protein kinase regulatory subunit beta-2-like
Location	Cp4.1LG05: 9775483 .. 9780923 (+)
RNA-Seq Expression	Cp4.1LG05g13870
Synteny	Cp4.1LG05g13870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGTTAAATCTGTAGAGTAAAAGCAAAAGAGGGAAGGGGATGGGAAGAGAAAGAACCCAAAAAGGAAGAGGGAAAATTGGAAGTGTTCCTTCCGATTCAGTGTTTTATCGATTAAAATTGTGTATTTATGGGTCGAAGTTATGGTGCGTTCATTTCTTCACTCAATTCTCGATTTGGGTGCTTGTTTTTGCTGCAATTCTTCCTCATAATTGGGTTTGTTTCTTCTTTTCTTCTTCTCTTCTTGAAATCTTGCGTTTATTGTGATGAGCGATTGATATCTGAACTGGGTTTTGCTTTGTTTTTGTTTTGAAGTGGTAGTGAATGCTAGGGAAAGGGATTGAGAAGATGGGGAACACCCTTCTGCTCAATTGAATTATGAGAACACGAACGAGTGTGGTGAACCAATACTTGAGTATTCTGTGGGTTTTATTGATACTCATCTTGTGGCTTTCGTCTCCCCAGTAGAGGTATGCCTTAATTTGTTTCAATAGAATCTGGATGCTGGGTTTTGTTTTCCTCCCTTTCATTGCTTTTATGAACAAAACAGAAGAAAAATGTGTATACATGTATAAGAGTTGGATGTCTGGCTTGCTTGTTTGGTGTATGGTGTAATAGCTGAAGCTCATTGTCTTGTTTGGGCTTTCCTCTCAAGGTTAAAACGTGTCAACTATGGAGAGGTTCTATCCCTACTCCGACTAGTACTTTGCACTGGTCTAGTGGCTGGCTCTGACACCATTTGTAACCGCTCAAATCCACCACTAGGGAGAGGTTTCCACATCTTTCTAAGGAATGTTTTGTTCCCCTCTCCAACCGATATGAGATCTCACAATCCACCCTGCTTGAGGGCTCAGTGTCCTCGTTGGCACACCACTCGGTATCTAGCTCTGATACCATTTGTAACAGCCCTCGCCCTTACTCTTCAACCGATGTGCGATCTCATAATCCACCTCTTGGGGACCCAACGTCCTCCTTGGCACACCGCCTGGTTTCTAGCTCTGATACCATTTGTAATAACTCAAGTCCACCGCTAGCAAATATTGTCCTCTTTGGGCTATCCCTTCCGGACTTCCTCTCAAGGTTTTAAAATGCGTCCACTATGGAGAGGGTCTATCCCTACTCCAACTAGTGTCTCGCAACGTCTAGTGGCTGACTCTGATACCCTTTGTAACAGCCCAAACCCACAACTAACAGATATTGTCTACTTTGACCCATTACGTATTGTCACCAGCCTCATGATTTTAAAACGTGTCTACTAGGGAGAGGTTTCCAAATCTTTATAAGAAATGCTTCGTTTTCGTTTCCCTCTCCAACTAATCTCACAATGCTATGCTAGTTCTGAGTTTTGGATTCTAAAGGTTGTTCTTCACTGATTTTTCCCCCCACTTGGTGTAAATTATGGTGTTTTAACAGTAACAACTAGTGCAAAAGTACTTGTGGCAGACGTACTTTCTTCTTTTGTTTGGAACTTCTCAAAGTTCCACAGAATTCAAGGACTAAGTACAATTGTTCCCTCTAGTTTCTGAGGACAAACTGTATTTAATGACATTATGTGACATGTAAATTATTTTTTTGAGGCTTAAAGGTCATAATACAATGAATGATGAGGAAGTGTTGAACACACCAAGGACATCTGTGAAGCTCTCTTGGAACCATGGTGGCAAGCAAGTGGCTATCATTGGGTCATGGGATAACTGGGAGACAAGGTACCATTTTGCAGTTAAGATGTTTTATTTTGAACTTTTTTTGTCTGACATAGAACATTTCATCTCCTTTTGTTAGGGAGATCTTGCAGAGCATAGGGAAAGATTTTATCGTTGTCAAAACGCTTCCCTCGGGGATCTACCATTACCGATTCATTGTTGATGGATGGTTGACACATGCTCCTGATTTGCCATGGGTTTTTGATGATTCAGGAAATTCTTACAATATTCTTGACTTGATGGTAATTTCTACTGTTCTTTTTTACTTGGATTCTCAATGTTTGCTCGACGATTCGGTTGTATAGATCTTAAGAAGATGATAAAGTAAACATCTCCTGCAAAGATTGTTCAAAAGAACACTGACCGTGTTCTTGAAATGATATTTGATTTGGTCTGATTGTTCTGTCAAGCTTGAAAGGTCAGGACCTCTGGGGAGTTACCATACGTTTAAATCTTTTTTCCCAGAATTCTACTGATAGGAACAGGAAAAGGGATGGAACAGCTAAATTTGCTACTTGTTCTTACTTTATTTCTTATCAAAACCTCTTTATGGACTGTTTAGTTAAGATTTTTGTTTGATAAGAGTGGACATTCAGACATGATGGAATGAGATATCAAAACCACTTGTGGAGTGTGTTTGTTTTAATAGTCCAAGTCCACCGCTAGTAGATATTATCCGCTTTGACCCGTTACGTATCGTTGTCAACCTCACGGTTTTAAAACACATCTACTAGGGAGGACCCAACGTCTTTGCTGGCATAACCCGCTTGGTGCTTAGCTCTGATACATAACGGGCCAAAGTGGACATATTTGCTAGTGGTGGACTTGGGCTGTTACAAATGGTATCAGAACTAGACATTGAGCGGTGTGCACGTTGGGCCCCAAGGGAGTGGATTGTGAGATCTCACATTGGTTGGAGAAGGGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAACTGTGAGGCTGGTAGTGGTACATAACGGGCCGAAGCGGATAATATTTGCTAACTGTGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGAGCGGTGTGGCAATGAGGACGATGGGCCCCCAAGGGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGAGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGTGCTTTAAAACCGTGAGACTGATGGCGATACGTAACGGGCCAAGCAGACAACATTTGTTAGTGGTGTGCTTGGCTGTTACAGACACAAATCTAGTACCTAGTTCTCGTGTCCATTGCTGTGCAGCAAGTTCTGCTGAATCTTATGATATGATGCTTCTTTCATTAGTTTTGGCTCTTCTTCATTGTTACTCTTTGTTGATTATGGTGGAATCCTTAGAAAAAGCTCTTCATCTGCTCAGTACTAATTTGAATTCATATCGAATTGTCTTACAGACACCTGTCTCGGAATTGCCCGAAAGTCTGTCCGAGTTTGAATTTCCTCCATCCCCACCATCTACTTATGACAACGAACACTTCAACGACGATGATTTCAGTAGGCCTCCACCGGATCTACCACCACAACTGCGAGAGACTATTTTGAACGAATCATCTCGCTGCATAAGCGGTCAGCAGTCTGGCGTGCAGCCTCGACACACCGAGTTAAATCATTTATACCAAAATAACGTTGGAGGTGAATTCATGGCACTTGGTTCAACATTCAGGTTATGTGAAAAACATGTCACAATGTTACTTTTCAAGCCATTGCTGAAAAGAAATTGATAGAGTTTGGTCCACTGTTCTTTTCCTCTTCTAAATTTGTGGCCTGAATGATTATTTATGTGAAGATTATCATTCTAATAGCTTGAAGAGTGCTTGAAATAGGATTCATTTCCATGTGTTTTAATATCTGTTCATTATGGACCTTGCCCTCAATAGTACTTGTTTCAATGAAGTGAGAGATCTGCATTTATATAGATTCTTTCCGTTCTAGCTTATCCAGAAACCCCTCCGGCCGAAAACTAGTGGTAGGTTGTCCCGTAGAGCTTTCGGAGAAGGGTAGCCTAGTGTGTAAGCACAGCAATGAACCATGACGAACCCTCAGACGACCTATCTAAGATTAGGGGGGAGATCCTTAGTAGTGGTGACCCTTTCACTCTTCCACGGACTGATACATGTACCTAAATGCAGCTTGCCTTAAAGATGACTTTGAGGAAGGAGATGAGACGCTCTACCTCTTTACAAATACGAGAAATCACTTAGGACAAGAGGTGTTGACAACTTGAGCCTTGACTGCCTGGTTTTGGATCAAATCAGCTCCTAGGATATGTAAACTCTATTACTTTTACTTGTGCAATATGTTTCAAGCCCCATTGGAATTGAAATGCTGAATCCATTAAATTGTTCTCAGATGTCTCTGCTTTTCCCTGGATCATGTCATCACCATTCGCTCTATGGCAATGGAGTTCTTCGTCCTTTTTCGACGTCCCGTTCTTTCCGAACTGATTTCTGCCTCCTGTAAATTAATCGAGTTTCGAGTTTTATGCTTCTCTTTGTTTAATTGTTTGTGTTCTTGAAATTAATATCTCAAACATTCTGCAGAGGCACAACAGTTCTTGCTCCAACAGGATCAAGAAAACAGCTTGGTGTATTGAAATGGGAATGGAAAAGAATCCAAACTCATATGAGGTGACAGACTAACAACAAAATCGAACCGAGTTACAACAGTTTGTATTAGATTCTGGAAGAACATTACAACTCAAAATAGGCATAAACAGTGGGTTTTTGGTGGGCTGTAGAGAAGCAGCAGGAGGATATCAGGTTACTGTCATGGTTGATCAGATTCATCTCACAGGTACTTTAACCCAGCCATTGGCAAAAGCTATGGCTAAGATCACGAAAGGCGTCGACATGCCAAAGATGATGATATAAGGAAGAGGAGTCTTCATGGGATTTTCCCCTTCCCTCTCCCCTGCTGTCTGCCAATACCTGCACCAAATTCAACCACATTTCCATCTTAAAGCCCTGATGATATCTTCTTCTACTTGAAAAACGACTCCAATCGTGTGAATCCCACATCGGTTTCAAAACCTTGGGAGAAACCCGAAAGGGAAAGCTAGCAGTGGGCTTAGACCGTTACAAATTGATACAGAAAAGGGAAAGAATTGCTTACTGCTCTGGCTCTTGTTCTTTGGTTATGAACTTCTTCTTCCCTCCCTTCTTGACCTCGGCGTCGCCACCACCTGAAAAGCAACATCAGCAGCTGAAAAACAGCAAGAGTGAGCTGCAGATCCAAGCGAAAGTAGAAGGGCCTTCACCTGAATTTGCAAGAAGTTTGAACTGAGAAGCCCTTGGCGTTGGCCTTGGCTGCGGCGGCGAGAAGGTGGTGCAGGGAAGAGGAGCGAAGAAGGGAGATGGGTTTTGTTGGAGTGGGAATTTGATGGTGGTAAGGGAAGAAGAAAGAGGGAATTTGGCGGCCATTGTTGAAGGAAGAGTGAGCTCTGTTTGGGCATTTGTCGTTGGGGATCACATATATCACTGGAGATTTGGATATGGATGGTGTGGTGTGGCACTCATATTATTATTAGCCAATGCGTGACATGACGACAGCCAAGACCTCTATGGCCCCATCTTCACCTTTCATTGTAATTTGTGGTCACATTTCTATGGAGCCCTGAATGTACTTTTATGGTGGTTGAATTGACTCAACCCTTTTTACCCTTTCTAT

mRNA sequence

TAGGTTAAATCTGTAGAGTAAAAGCAAAAGAGGGAAGGGGATGGGAAGAGAAAGAACCCAAAAAGGAAGAGGGAAAATTGGAAGTGTTCCTTCCGATTCAGTGTTTTATCGATTAAAATTGTGTATTTATGGGTCGAAGTTATGGTGCGTTCATTTCTTCACTCAATTCTCGATTTGGGTGCTTGTTTTTGCTGCAATTCTTCCTCATAATTGGTGGTAGTGAATGCTAGGGAAAGGGATTGAGAAGATGGGGAACACCCTTCTGCTCAATTGAATTATGAGAACACGAACGAGTGTGGTGAACCAATACTTGAGTATTCTGTGGGTTTTATTGATACTCATCTTGTGGCTTTCGTCTCCCCAGTAGAGGCTTAAAGGTCATAATACAATGAATGATGAGGAAGTGTTGAACACACCAAGGACATCTGTGAAGCTCTCTTGGAACCATGGTGGCAAGCAAGTGGCTATCATTGGGTCATGGGATAACTGGGAGACAAGGGAGATCTTGCAGAGCATAGGGAAAGATTTTATCGTTGTCAAAACGCTTCCCTCGGGGATCTACCATTACCGATTCATTGTTGATGGATGGTTGACACATGCTCCTGATTTGCCATGGGTTTTTGATGATTCAGGAAATTCTTACAATATTCTTGACTTGATGACACCTGTCTCGGAATTGCCCGAAAGTCTGTCCGAGTTTGAATTTCCTCCATCCCCACCATCTACTTATGACAACGAACACTTCAACGACGATGATTTCAGTAGGCCTCCACCGGATCTACCACCACAACTGCGAGAGACTATTTTGAACGAATCATCTCGCTGCATAAGCGGTCAGCAGTCTGGCGTGCAGCCTCGACACACCGAGTTAAATCATTTATACCAAAATAACGTTGGAGGTGAATTCATGGCACTTGGTTCAACATTCAGGTTATGTGAAAAACATGTCACAATGTTACTTTTCAAGCCATTGCTGAAAAGAAATTGATAGAGTTTGGTCCACTGTTCTTTTCCTCTTCTAAATTTGTGGCCTGAATGATTATTTATGTGAAGATTATCATTCTAATAGCTTGAAGAGTGCTTGAAATAGGATTCATTTCCATGTGTTTTAATATCTGTTCATTATGGACCTTGCCCTCAATAGTACTTGTTTCAATGAAGTGAGAGATCTGCATTTATATAGATTCTTTCCGTTCTAGCTTATCCAGAAACCCCTCCGGCCGAAAACTAGTGGTAGGTTGTCCCGTAGAGCTTTCGGAGAAGGGTAGCCTAGTGTGTAAGCACAGCAATGAACCATGACGAACCCTCAGACGACCTATCTAAGATTAGGGGGGAGATCCTTAGTAGTGGTGACCCTTTCACTCTTCCACGGACTGATACATGTACCTAAATGCAGCTTGCCTTAAAGATGACTTTGAGGAAGGAGATGAGACGCTCTACCTCTTTACAAATACGAGAAATCACTTAGGACAAGAGGTGTTGACAACTTGAGCCTTGACTGCCTGGTTTTGGATCAAATCAGCTCCTAGGATATATGTCTCTGCTTTTCCCTGGATCATGTCATCACCATTCGCTCTATGGCAATGGAGTTCTTCGTCCTTTTTCGACGTCCCGTTCTTTCCGAACTGATTTCTGCCTCCTAGGCACAACAGTTCTTGCTCCAACAGGATCAAGAAAACAGCTTGGTGTATTGAAATGGGAATGGAAAAGAATCCAAACTCATATGAGGTGACAGACTAACAACAAAATCGAACCGAGTTACAACAGTTTGTATTAGATTCTGGAAGAACATTACAACTCAAAATAGGCATAAACAGTGGGTTTTTGGTGGGCTGTAGAGAAGCAGCAGGAGGATATCAGGTTACTGTCATGGTTGATCAGATTCATCTCACAGGTACTTTAACCCAGCCATTGGCAAAAGCTATGGCTAAGATCACGAAAGGCGTCGACATGCCAAAGATGATGATATAAGGAAGAGGAGTCTTCATGGGATTTTCCCCTTCCCTCTCCCCTGCTGTCTGCCAATACCTGCACCAAATTCAACCACATTTCCATCTTAAAGCCCTGATGATATCTTCTTCTACTTGAAAAACGACTCCAATCGTGTGAATCCCACATCGGTTTCAAAACCTTGGGAGAAACCCGAAAGGGAAAGCTAGCAGTGGGCTTAGACCGTTACAAATTGATACAGAAAAGGGAAAGAATTGCTTACTGCTCTGGCTCTTGTTCTTTGGTTATGAACTTCTTCTTCCCTCCCTTCTTGACCTCGGCGTCGCCACCACCTGAAAAGCAACATCAGCAGCTGAAAAACAGCAAGAGTGAGCTGCAGATCCAAGCGAAAGTAGAAGGGCCTTCACCTGAATTTGCAAGAAGTTTGAACTGAGAAGCCCTTGGCGTTGGCCTTGGCTGCGGCGGCGAGAAGGTGGTGCAGGGAAGAGGAGCGAAGAAGGGAGATGGGTTTTGTTGGAGTGGGAATTTGATGGTGGTAAGGGAAGAAGAAAGAGGGAATTTGGCGGCCATTGTTGAAGGAAGAGTGAGCTCTGTTTGGGCATTTGTCGTTGGGGATCACATATATCACTGGAGATTTGGATATGGATGGTGTGGTGTGGCACTCATATTATTATTAGCCAATGCGTGACATGACGACAGCCAAGACCTCTATGGCCCCATCTTCACCTTTCATTGTAATTTGTGGTCACATTTCTATGGAGCCCTGAATGTACTTTTATGGTGGTTGAATTGACTCAACCCTTTTTACCCTTTCTAT

Coding sequence (CDS)

ATGAATGATGAGGAAGTGTTGAACACACCAAGGACATCTGTGAAGCTCTCTTGGAACCATGGTGGCAAGCAAGTGGCTATCATTGGGTCATGGGATAACTGGGAGACAAGGGAGATCTTGCAGAGCATAGGGAAAGATTTTATCGTTGTCAAAACGCTTCCCTCGGGGATCTACCATTACCGATTCATTGTTGATGGATGGTTGACACATGCTCCTGATTTGCCATGGGTTTTTGATGATTCAGGAAATTCTTACAATATTCTTGACTTGATGACACCTGTCTCGGAATTGCCCGAAAGTCTGTCCGAGTTTGAATTTCCTCCATCCCCACCATCTACTTATGACAACGAACACTTCAACGACGATGATTTCAGTAGGCCTCCACCGGATCTACCACCACAACTGCGAGAGACTATTTTGAACGAATCATCTCGCTGCATAAGCGGTCAGCAGTCTGGCGTGCAGCCTCGACACACCGAGTTAAATCATTTATACCAAAATAACGTTGGAGGTGAATTCATGGCACTTGGTTCAACATTCAGGTTATGTGAAAAACATGTCACAATGTTACTTTTCAAGCCATTGCTGAAAAGAAATTGA

Protein sequence

MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHYRFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFNDDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTFRLCEKHVTMLLFKPLLKRN

Homology

[Close]

BLAST of Cp4.1LG05g13870 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.8e-44
Identity = 91/194 (46.91%), Postives = 123/194 (63.40%), Query Frame = 0


Query: 4   EEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHYRFI 63
           EE  N       ++W HGGK++A+ GSWDNW+TR  LQ  GKDF ++K LPSG+Y YRFI
Sbjct: 94  EEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFI 153

Query: 64  VDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFNDDD 123
           VDG   HAP+LP   DD+GN++NILDL   V E  +S+S FE P SP ++Y N     +D
Sbjct: 154 VDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAED 213

Query: 124 FSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLY--QNNVGGEFMALGSTFR 183
           +S+ PP +PP L+ T+LN  +          +P+H  LNHLY  +   G   +ALGST R
Sbjct: 214 YSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHR 273

Query: 184 LCEKHVTMLLFKPL 196
              K+VT++L+K L
Sbjct: 274 FLAKYVTVVLYKSL 287

[Close]

BLAST of Cp4.1LG05g13870 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-36
Identity = 80/184 (43.48%), Postives = 112/184 (60.87%), Query Frame = 0


Query: 16  LSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHYRFIVDGWLTHAPDLP 75
           ++WN GG  VA+ GSWDNW +R+ LQ  GKD  ++  LPSGIYHY+ IVDG   + PDLP
Sbjct: 104 ITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLP 163

Query: 76  WVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFNDDDFSRPPPDLPPQL 135
           +V D+ GN  NILD+   V E PES+ EFE PPSP  +Y       +D+++ P  +PPQL
Sbjct: 164 FVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQL 223

Query: 136 RETILNESSRCISGQQSGVQPRHTELNHLY--QNNVGGEFMALGSTFRLCEKHVTMLLFK 195
             T+L  +           +P+H  LNH++  Q       +ALG T R   K++T++L+K
Sbjct: 224 HLTLLGTTEE----TAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYK 283

Query: 196 PLLK 198
           PL +
Sbjct: 284 PLTR 283

[Close]

BLAST of Cp4.1LG05g13870 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-23
Identity = 64/192 (33.33%), Postives = 95/192 (49.48%), Query Frame = 0


Query: 16  LSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHYRFIVDGWLTHAPDLP 75
           + W+ GGK+V I GS++NW T+  L     DF+ +  LP G + Y+F VDG   H P  P
Sbjct: 81  IRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP 140

Query: 76  WVFDDSGNSYNILDLMTPVSELPESL----------SEFEFPPSPPSTYDNE--HFNDDD 135
            V    G   N++ +     E+ ++L          S  +   SPP  Y  E   F  ++
Sbjct: 141 VVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYAFRSEE 200

Query: 136 FSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTFRLC 195
             + PP LPP L + ILN+ +          +P H  LNHLY  ++    M L +T R  
Sbjct: 201 RFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYK 260

[Close]

BLAST of Cp4.1LG05g13870 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-23
Identity = 64/192 (33.33%), Postives = 95/192 (49.48%), Query Frame = 0


Query: 16  LSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHYRFIVDGWLTHAPDLP 75
           + W+ GGK+V I GS++NW T+  L     DF+ +  LP G + Y+F VDG   H P  P
Sbjct: 80  IRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP 139

Query: 76  WVFDDSGNSYNILDLMTPVSELPESL----------SEFEFPPSPPSTYDNEH--FNDDD 135
            V    G   N++ +     E+ ++L          S  +   SPP  Y  E   F  ++
Sbjct: 140 VVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEE 199

Query: 136 FSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTFRLC 195
             + PP LPP L + ILN+ +          +P H  LNHLY  ++    M L +T R  
Sbjct: 200 RFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYK 259

[Close]

BLAST of Cp4.1LG05g13870 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.2e-23
Identity = 64/192 (33.33%), Postives = 94/192 (48.96%), Query Frame = 0


Query: 16  LSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHYRFIVDGWLTHAPDLP 75
           + W+ GGK+V I GS++NW T+  L     DF+ +  LP G + Y+F VDG   H P  P
Sbjct: 80  IRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP 139

Query: 76  WVFDDSGNSYNILDLMTPVSELPESL----------SEFEFPPSPPSTYDNEH--FNDDD 135
            V    G   N++ +     E+ ++L          S  +   SPP  Y  E   F  ++
Sbjct: 140 VVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEE 199

Query: 136 FSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTFRLC 195
             + PP LPP L + ILN+ +          +P H  LNHLY  +     M L +T R  
Sbjct: 200 RFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSTKDSVMVLSATHRYK 259

[Close]

BLAST of Cp4.1LG05g13870 vs. NCBI nr
Match: XP_023534588.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421 bits (1083), Expect = 4.90e-149
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60
           MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY
Sbjct: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60

Query: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120
           RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN
Sbjct: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120

Query: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RLCEKHVTMLLFKPLLKRN 199
           RLCEKHVTMLLFKPLLKRN
Sbjct: 181 RLCEKHVTMLLFKPLLKRN 199

[Close]

BLAST of Cp4.1LG05g13870 vs. NCBI nr
Match: XP_022947532.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 413 bits (1061), Expect = 1.11e-145
Identity = 195/199 (97.99%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60
           MNDEEVLNTPRTSVK SWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY
Sbjct: 1   MNDEEVLNTPRTSVKFSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60

Query: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120
           RFIVDGWLTHAPDLPWV DDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNE+FN
Sbjct: 61  RFIVDGWLTHAPDLPWVCDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEYFN 120

Query: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPQL+ETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPQLQETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RLCEKHVTMLLFKPLLKRN 199
           RLCEKHVTMLLFKPLLKRN
Sbjct: 181 RLCEKHVTMLLFKPLLKRN 199

[Close]

BLAST of Cp4.1LG05g13870 vs. NCBI nr
Match: KAG7026996.1 (SNF1-related protein kinase regulatory subunit beta-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 413 bits (1061), Expect = 2.12e-145
Identity = 195/199 (97.99%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60
           MNDEEVLNTPRTSVK SWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY
Sbjct: 19  MNDEEVLNTPRTSVKFSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 78

Query: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120
           RFIVDGWLTHAPDLPWV DDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNE+FN
Sbjct: 79  RFIVDGWLTHAPDLPWVCDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEYFN 138

Query: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPQL+ETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 139 DDDFSRPPPDLPPQLQETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 198

Query: 181 RLCEKHVTMLLFKPLLKRN 199
           RLCEKHVTMLLFKPLLKRN
Sbjct: 199 RLCEKHVTMLLFKPLLKRN 217

[Close]

BLAST of Cp4.1LG05g13870 vs. NCBI nr
Match: XP_023534584.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385 bits (989), Expect = 1.94e-134
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60
           MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY
Sbjct: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60

Query: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120
           RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN
Sbjct: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120

Query: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 R-LC 183
           R LC
Sbjct: 181 RCLC 184

[Close]

BLAST of Cp4.1LG05g13870 vs. NCBI nr
Match: XP_023534585.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385 bits (988), Expect = 2.23e-134
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60
           MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY
Sbjct: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60

Query: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120
           RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN
Sbjct: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120

Query: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180

[Close]

BLAST of Cp4.1LG05g13870 vs. ExPASy TrEMBL
Match: A0A6J1G6Q5 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111451369 PE=3 SV=1)

HSP 1 Score: 413 bits (1061), Expect = 5.38e-146
Identity = 195/199 (97.99%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60
           MNDEEVLNTPRTSVK SWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY
Sbjct: 1   MNDEEVLNTPRTSVKFSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60

Query: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120
           RFIVDGWLTHAPDLPWV DDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNE+FN
Sbjct: 61  RFIVDGWLTHAPDLPWVCDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEYFN 120

Query: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPQL+ETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPQLQETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RLCEKHVTMLLFKPLLKRN 199
           RLCEKHVTMLLFKPLLKRN
Sbjct: 181 RLCEKHVTMLLFKPLLKRN 199

[Close]

BLAST of Cp4.1LG05g13870 vs. ExPASy TrEMBL
Match: A0A6J1G6P8 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451369 PE=3 SV=1)

HSP 1 Score: 376 bits (966), Expect = 2.44e-131
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60
           MNDEEVLNTPRTSVK SWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY
Sbjct: 1   MNDEEVLNTPRTSVKFSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60

Query: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120
           RFIVDGWLTHAPDLPWV DDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNE+FN
Sbjct: 61  RFIVDGWLTHAPDLPWVCDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEYFN 120

Query: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPQL+ETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPQLQETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180

[Close]

BLAST of Cp4.1LG05g13870 vs. ExPASy TrEMBL
Match: A0A6J1J923 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima OX=3661 GN=LOC111483696 PE=3 SV=1)

HSP 1 Score: 374 bits (959), Expect = 1.92e-130
Identity = 173/199 (86.93%), Postives = 186/199 (93.47%), Query Frame = 0


Query: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60
           MN+E V N PRTSVK+SWNHGGKQVAIIGSWDNWETRE+LQS+GK+F+++KTLPSGIYHY
Sbjct: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETRELLQSLGKEFVIIKTLPSGIYHY 60

Query: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120
           RF+VDGWLT APDLPWV DDSGNSYN+LDLMTPVSELPESLSEFEFPPSPPS+YDN+ FN
Sbjct: 61  RFMVDGWLTCAPDLPWVCDDSGNSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120

Query: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPP LRETILNE S C SG QS VQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RLCEKHVTMLLFKPLLKRN 199
           R CEK+VTMLLFKPLLKRN
Sbjct: 181 RFCEKYVTMLLFKPLLKRN 199

[Close]

BLAST of Cp4.1LG05g13870 vs. ExPASy TrEMBL
Match: A0A6J1FXH3 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata OX=3662 GN=LOC111448487 PE=3 SV=1)

HSP 1 Score: 371 bits (953), Expect = 1.58e-129
Identity = 172/199 (86.43%), Postives = 186/199 (93.47%), Query Frame = 0


Query: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60
           MN+E V N PRTSVK+SWNHGGKQVAIIGSWDNWETRE+LQS+GK+F+++KTLPSGIYHY
Sbjct: 1   MNNEGVSNIPRTSVKISWNHGGKQVAIIGSWDNWETREMLQSLGKEFVIIKTLPSGIYHY 60

Query: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120
           RF+VDGWLT APDLPWV DDSG+SYN+LDLMTPVSELPESLSEFEFPPSPPS+YDN+ FN
Sbjct: 61  RFMVDGWLTCAPDLPWVCDDSGHSYNVLDLMTPVSELPESLSEFEFPPSPPSSYDNQCFN 120

Query: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPP LRETILNE S C SG QS VQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPPLRETILNEPSCCTSGHQSDVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RLCEKHVTMLLFKPLLKRN 199
           R CEK+VTMLLFKPLLKRN
Sbjct: 181 RFCEKYVTMLLFKPLLKRN 199

[Close]

BLAST of Cp4.1LG05g13870 vs. ExPASy TrEMBL
Match: A0A1S4E4K9 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo OX=3656 GN=LOC103502112 PE=3 SV=1)

HSP 1 Score: 370 bits (950), Expect = 4.53e-129
Identity = 172/199 (86.43%), Postives = 185/199 (92.96%), Query Frame = 0


Query: 1   MNDEEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHY 60
           MN+EEV NTPRTSVK+SWNHGGKQVAI+GSWDNWET E+LQSIGK+FI +KTL SGIYHY
Sbjct: 1   MNNEEVSNTPRTSVKISWNHGGKQVAIVGSWDNWETSEVLQSIGKEFITIKTLSSGIYHY 60

Query: 61  RFIVDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFN 120
           RF+VDGWLT APDLPWV DD+GNSYNILDLMTP SELPESLSEFEFPPSPPS+YDN+ FN
Sbjct: 61  RFMVDGWLTCAPDLPWVCDDAGNSYNILDLMTPASELPESLSEFEFPPSPPSSYDNQCFN 120

Query: 121 DDDFSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180
           DDDFSRPPPDLPPQLRET+LNE S C SG QSGVQPRHTELNHLYQNNVGGEFMALGSTF
Sbjct: 121 DDDFSRPPPDLPPQLRETVLNEPSCCTSGHQSGVQPRHTELNHLYQNNVGGEFMALGSTF 180

Query: 181 RLCEKHVTMLLFKPLLKRN 199
           +  EK+VTMLLFKPLLKRN
Sbjct: 181 KFYEKYVTMLLFKPLLKRN 199

[Close]

BLAST of Cp4.1LG05g13870 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.7e-45
Identity = 91/194 (46.91%), Postives = 123/194 (63.40%), Query Frame = 0


Query: 4   EEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHYRFI 63
           EE  N       ++W HGGK++A+ GSWDNW+TR  LQ  GKDF ++K LPSG+Y YRFI
Sbjct: 64  EEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFI 123

Query: 64  VDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFNDDD 123
           VDG   HAP+LP   DD+GN++NILDL   V E  +S+S FE P SP ++Y N     +D
Sbjct: 124 VDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAED 183

Query: 124 FSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLY--QNNVGGEFMALGSTFR 183
           +S+ PP +PP L+ T+LN  +          +P+H  LNHLY  +   G   +ALGST R
Sbjct: 184 YSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHR 243

Query: 184 LCEKHVTMLLFKPL 196
              K+VT++L+K L
Sbjct: 244 FLAKYVTVVLYKSL 257

[Close]

BLAST of Cp4.1LG05g13870 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.7e-45
Identity = 91/194 (46.91%), Postives = 123/194 (63.40%), Query Frame = 0


Query: 4   EEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHYRFI 63
           EE  N       ++W HGGK++A+ GSWDNW+TR  LQ  GKDF ++K LPSG+Y YRFI
Sbjct: 66  EEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFI 125

Query: 64  VDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFNDDD 123
           VDG   HAP+LP   DD+GN++NILDL   V E  +S+S FE P SP ++Y N     +D
Sbjct: 126 VDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAED 185

Query: 124 FSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLY--QNNVGGEFMALGSTFR 183
           +S+ PP +PP L+ T+LN  +          +P+H  LNHLY  +   G   +ALGST R
Sbjct: 186 YSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHR 245

Query: 184 LCEKHVTMLLFKPL 196
              K+VT++L+K L
Sbjct: 246 FLAKYVTVVLYKSL 259

[Close]

BLAST of Cp4.1LG05g13870 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43
Identity = 90/194 (46.39%), Postives = 122/194 (62.89%), Query Frame = 0


Query: 4   EEVLNTPRTSVKLSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHYRFI 63
           EE  N       ++W HGGK++A+ GSWDNW+T   LQ  GKDF ++K LPSG+Y YRFI
Sbjct: 64  EEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTSR-LQRSGKDFTIMKVLPSGVYEYRFI 123

Query: 64  VDGWLTHAPDLPWVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFNDDD 123
           VDG   HAP+LP   DD+GN++NILDL   V E  +S+S FE P SP ++Y N     +D
Sbjct: 124 VDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAED 183

Query: 124 FSRPPPDLPPQLRETILNESSRCISGQQSGVQPRHTELNHLY--QNNVGGEFMALGSTFR 183
           +S+ PP +PP L+ T+LN  +          +P+H  LNHLY  +   G   +ALGST R
Sbjct: 184 YSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHR 243

Query: 184 LCEKHVTMLLFKPL 196
              K+VT++L+K L
Sbjct: 244 FLAKYVTVVLYKSL 256

[Close]

BLAST of Cp4.1LG05g13870 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-37
Identity = 80/184 (43.48%), Postives = 112/184 (60.87%), Query Frame = 0


Query: 16  LSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHYRFIVDGWLTHAPDLP 75
           ++WN GG  VA+ GSWDNW +R+ LQ  GKD  ++  LPSGIYHY+ IVDG   + PDLP
Sbjct: 104 ITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLP 163

Query: 76  WVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFNDDDFSRPPPDLPPQL 135
           +V D+ GN  NILD+   V E PES+ EFE PPSP  +Y       +D+++ P  +PPQL
Sbjct: 164 FVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQL 223

Query: 136 RETILNESSRCISGQQSGVQPRHTELNHLY--QNNVGGEFMALGSTFRLCEKHVTMLLFK 195
             T+L  +           +P+H  LNH++  Q       +ALG T R   K++T++L+K
Sbjct: 224 HLTLLGTTEE----TAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYK 283

Query: 196 PLLK 198
           PL +
Sbjct: 284 PLTR 283

[Close]

BLAST of Cp4.1LG05g13870 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-37
Identity = 80/184 (43.48%), Postives = 112/184 (60.87%), Query Frame = 0


Query: 16  LSWNHGGKQVAIIGSWDNWETREILQSIGKDFIVVKTLPSGIYHYRFIVDGWLTHAPDLP 75
           ++WN GG  VA+ GSWDNW +R+ LQ  GKD  ++  LPSGIYHY+ IVDG   + PDLP
Sbjct: 141 ITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLP 200

Query: 76  WVFDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSTYDNEHFNDDDFSRPPPDLPPQL 135
           +V D+ GN  NILD+   V E PES+ EFE PPSP  +Y       +D+++ P  +PPQL
Sbjct: 201 FVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQL 260

Query: 136 RETILNESSRCISGQQSGVQPRHTELNHLY--QNNVGGEFMALGSTFRLCEKHVTMLLFK 195
             T+L  +           +P+H  LNH++  Q       +ALG T R   K++T++L+K
Sbjct: 261 HLTLLGTTEE----TAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYK 320

Query: 196 PLLK 198
           PL +
Sbjct: 321 PLTR 320

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g13870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCY5	3.8e-44	46.91	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
Q84VQ1	1.7e-36	43.48	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
O43741	3.7e-23	33.33	5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2...	[more]
Q6PAM0	3.7e-23	33.33	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab...	[more]
Q9QZH4	8.2e-23	33.33	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=...	[more]

BLAST of Cp4.1LG05g13870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534588.1	4.90e-149	100.00	SNF1-related protein kinase regulatory subunit beta-2-like isoform X5 [Cucurbita...	[more]
XP_022947532.1	1.11e-145	97.99	SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 [Cucurbita...	[more]
KAG7026996.1	2.12e-145	97.99	SNF1-related protein kinase regulatory subunit beta-2 [Cucurbita argyrosperma su...	[more]
XP_023534584.1	1.94e-134	99.46	SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 [Cucurbita...	[more]
XP_023534585.1	2.23e-134	100.00	SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 [Cucurbita...	[more]

BLAST of Cp4.1LG05g13870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6Q5	5.38e-146	97.99	SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 OS=Cucurbi...	[more]
A0A6J1G6P8	2.44e-131	97.79	SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 OS=Cucurbi...	[more]
A0A6J1J923	1.92e-130	86.93	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima O...	[more]
A0A6J1FXH3	1.58e-129	86.43	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata...	[more]
A0A1S4E4K9	4.53e-129	86.43	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo OX=36...	[more]

BLAST of Cp4.1LG05g13870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16360.1	2.7e-45	46.91	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	2.7e-45	46.91	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.2	1.5e-43	46.39	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.1	1.2e-37	43.48	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	1.2e-37	43.48	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006828	Association with the SNF1 complex (ASC) domain	SMART	SM01010	AMPKBI_2	coord: 107..195 e-value: 1.5E-11 score: 54.4
IPR006828	Association with the SNF1 complex (ASC) domain	PFAM	PF04739	AMPKBI	coord: 126..194 e-value: 1.3E-15 score: 57.4
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 7..92 e-value: 1.7E-19 score: 71.4
None	No IPR available	GENE3D	6.20.250.60		coord: 100..195 e-value: 4.0E-20 score: 73.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..129
None	No IPR available	PANTHER	PTHR46316:SF6	SNF1-RELATED KINASE REGULATORY SUBUNIT BETA-2	coord: 3..197
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 13..89 e-value: 1.30011E-20 score: 79.9504
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 13..90 e-value: 2.3E-24 score: 85.4
IPR043554	SNF1-related protein kinase regulatory subunit beta	PANTHER	PTHR46316	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 3..197
IPR037256	ASC domain superfamily	SUPERFAMILY	160219	AMPKBI-like	coord: 94..195
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 12..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g13870.1	Cp4.1LG05g13870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding