Cp4.1LG05g13670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g13670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RAC-like GTP binding protein 5
Location	Cp4.1LG05: 9651562 .. 9655188 (-)
RNA-Seq Expression	Cp4.1LG05g13670
Synteny	Cp4.1LG05g13670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTAAAATAATTTCACAAATTGAAAGCAAAAGCTCCACATTTACATACAAAAACAAAATGTTTGGTTGCGGCCCGTGTTTTCCTTCAAAAAGAAGAAAATAACAACCAAAGAGAGAGTACCTTTCTTTAAAGATGAGATTGAGAATTGTGAATAAAAAAAAAAGTTACCCAAAAGTGGGTGTGAGGCAGAGAGAGAGAGAGAGAGAGAGAGCGGTGAAGAAGAGACGAGTGAGAGCGACAAGTTTGACATCAACATCGATTGATCGGTAAAAAATTTCCCAATTCCCTTCCAAACCCAATACGGTAGAGATGAAAGGGTGCTTTCAATTTCATTTTTGAGGCCGTGATTTCTAGTCTGCCATAGCTGGCCAAGAGCTGGCCTCCCCCTCTTTATAGACCCAGTTGCCTTGTCTTTGTGACTCTCCTTCTCTCTTCCACGCCCTCATACAATTTCCCCTTTCTGTGTGGCCCCTTCTAATTCTCCCTGGATTTGTGGGTCAACTCCATTGTTATCTCTTTTTCTCTGGGTGTTGCTGATTCTCAGCTCCCAAGGAGGAAATGAGTGTTTCCAGGTTTATTAAGTGTGTTACCGTTGGCGATGGTGCTGTTGGGAAGACTTGTATGCTTATCTCCTACACCAGCAACACTTTCCCCACCGTGAGCTACTTCATCTTTAATTTAACCCTTCTCTTCTTGTTCTTGTTCTTGTTTGGTTTCTGAGAAGTTTGTGACTAATGGACTCCATTTCTGCACTTTTTCTGCTGAGAATGCATGTTTCTTTTCTGGGTTTTTGTGCTTTTTGCTTTTTGTTTCAGTGAACCCTTTTCAAGTCTCCTCCATGTTGGAATTCTTGGTTTTTTTTAAGTGAATTTTCATTTGATGAACAAATCTATTGTAATTCTGTTGTTGTTTTTCGTGTCTTAAGCAAAGAAACTTCCCATCTACATGTTTGGTGGAACATGAATCTCTTGGAGTTTTAAGGGTTTTTCAAGCAATTTCAGGCTCTTTTCAGTTCATTAGTTCTTGCAGGAAGATTCCCACATGAGGAGACTTCTAAATTCATCAAAAAAATGGAATGAAATGTGGTTTTGTTTTCGTTTGTTTATCAATTTCAGGCTCTTTATGACCAATTGTTTGCCTCTTTGAGTGAGGCCATCCAAACATTTTAGTGTTCTTAGTGTACTTTTCAGCTGTGAGCATAGCCTCCATGAAACTCTATTCTAGCATGGTATCAGATCTCCATCTGTGCGTGCGTGATTCGGGGAAAACTTTCGCTATCTAGAAATCTTAATGATTTATCTGTCTTCCATTTCATAAGTTGTTCAATATGGTGTCTTGATTGGTAGACTGTAACAAAGATAGATTCTTAAGTTCTGTGAAATCGTTATCTATCTACGATGACGGTGTATAATCTGAAACAGGATTACGTGCCGACCGTTTTCGACAATTTTAGTGCAAATGTAGTTGTGGATGGCAGTACTGTCAACCTGGGCTTGTGGGATACTGCTGGTATGTTCAAAACAAGTCTTTACATAACATGTTTTCTTGCTGAAAGTCTGATGTGTATGAGTCATGAACCAGGCCAGGAAGATTACAATAGGTTGAGACCGTTGAGCTACCGTGGAGCCGATGTATTTCTCTTAGCGTTCTCGCTCATAAGCAAGGCTAGCTATGAAAATGTGGCCAAGAAAGTAAGGCTCTGCGTTGCGTTATCTTCGTCTCCGTCTTTTCGTTTAAACGTCTCTTAGCTAATACTCTTCTTTCCAATGACAGTGGATTCCTGAACTGAGGCACTATGCTCCTGGTGTACCAGTTATTCTTGTCGGGACTAAGCTTGGTTATATTCTTCACTATCTTTCTAATTTTCTCCTTTAGTGTTCGATTTGAAACAATTTTCTCGTTCTGTTCGTTCGTTTGCTGATGATTGTTTCTAAATACAACTTACCATGATGAACTACATGAAACAAAGATCTCGTGTTATAGTCGATACTATTTCTTTTACTCGAGCAACTCGTATTGTAACAAAAATGTGATGATTGTTCTGTATTTGGCTTCTTGGGTATTGATAAACTAGCTTGTCCCATAAAAGACAAAAGAACTGGATGTGAGATCATGAGATCCCACAACGGACAATATCTGCTAACGGTGGGCTTGGATTGTTACAAATGGTATCAGAGCCAGACATTGAGTGGTGTGCCAGCGAGGACGTTGGGCCTCCATAGGGGGTGGATTATGAGACCCCACATCGGTTGGAGAGGAGAATGAAACATTCCTTATAAGGGCGTGGAAACCTCTCCCTAGCAGATGATTTTAGAATCGTGAGGCTGACGGTGATAACGAGCCAAAGTGCATAATATCTGCTAGCGGTGGGCTTGAGCTATTACAAATGGTATCAGAGTTAGGTACCTAGCAGTGTGGCAGCGAGGACGCTGGGCCCCCAATGAGGGTGGATTGTGAGATTCCACAACGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAACTGTGAGGTTGACGGCGATACGTAACGGGCCAAAACGAACAATAATATTTTCTAGCGGTGGGCTTAGACTTAGGCTTTTACATTCCTCTCCTTGAAAACTAGTGCTTTTGATAAATATTATATTATCGTGTGCTCTCGATGCGGGATTATCAATAATCATGAGTATCAACTTGCTTCCTGTAGACCTTCGAGAAGATAAACAGTACCTGATCGAACACCCGGGGGTAGTCCCCATTACCACGTCCCAGGTATCCTTCTACTTCGCCCTGTATTTACGAATTCGATATTGTCGTAGTTTTGTTCATCATCAACGGTTCGATTTGAACGCTTCTTGCAGGGGGAGGAACTCAGAAAACTAATCGGTGCCCCAGTTTACATCGAATGCAGTTCGAAAACACAGCAAGTATGAAAAAAAACCACCTTCTTCTTGCTATACTTCCCTCCAGTTCCTCACTTTTTAACAAGTCTTTGATCCAAATGCAGAATGTGAAAGCCGTGTTCGATGCAGCGATCAAAGTGGTTCTCCAGCCTCCAAAGCGGAAGAAGCGAAAGAAGCGAAAGGCACAGAAGTCGTGTTCTATATTATGATGCAAAATTAGTCGTTTGTATCACAACCGGTTAGAACTCGAAGACGTATTAGTAAGCTACTACTCATCATTTAGCCCCTAACTATCACTATATATATGAGTTATATTTTCAAATCGTCCTTGACGCAACCCCGCGATCGATCGAGCAGCAAATCTCATCGTCTGTGCTATGATTTGTAAAAAGTGTTATGAATTCATCTGTTTGTAATATGCGTGCTGATAGTATATGTTCAAGTTTAGATATCGTCTATGAAACTGATTCTCGAGTTAGTATCGTGTAGCTCGACGCTGTATGTCGTCCTGCTTTGATCTATTGTAATGTTCTTGGACGCTTTTCGTCTACCAGCTGAGCTGGTTAGAAAGCTTTCCATTGATTGACATTTTGAAACTTTGGTTTTTCTGGCTTTGGATTAATGTTGACTGAACAATATATTATAGGCTTGTAATATGAACTGATTTTCGAGCACTTCGTATATATGTCGTATGATATTATCCTGTTT

mRNA sequence

TTCTAAAATAATTTCACAAATTGAAAGCAAAAGCTCCACATTTACATACAAAAACAAAATGTTTGGTTGCGGCCCGTGTTTTCCTTCAAAAAGAAGAAAATAACAACCAAAGAGAGAGTACCTTTCTTTAAAGATGAGATTGAGAATTGTGAATAAAAAAAAAAGTTACCCAAAAGTGGGTGTGAGGCAGAGAGAGAGAGAGAGAGAGAGAGCGGTGAAGAAGAGACGAGTGAGAGCGACAAGTTTGACATCAACATCGATTGATCGGTAAAAAATTTCCCAATTCCCTTCCAAACCCAATACGGTAGAGATGAAAGGGTGCTTTCAATTTCATTTTTGAGGCCGTGATTTCTAGTCTGCCATAGCTGGCCAAGAGCTGGCCTCCCCCTCTTTATAGACCCAGTTGCCTTGTCTTTGTGACTCTCCTTCTCTCTTCCACGCCCTCATACAATTTCCCCTTTCTGTGTGGCCCCTTCTAATTCTCCCTGGATTTGTGGGTCAACTCCATTGTTATCTCTTTTTCTCTGGGTGTTGCTGATTCTCAGCTCCCAAGGAGGAAATGAGTGTTTCCAGGTTTATTAAGTGTGTTACCGTTGGCGATGGTGCTGTTGGGAAGACTTGTATGCTTATCTCCTACACCAGCAACACTTTCCCCACCGATTACGTGCCGACCGTTTTCGACAATTTTAGTGCAAATGTAGTTGTGGATGGCAGTACTGTCAACCTGGGCTTGTGGGATACTGCTGGTATGTTCAAAACAAGTCTTTACATAACATGTTTTCTTGCTGAAAGTCTGATGTGTATGAGTCATGAACCAGGCCAGGAAGATTACAATAGGTTGAGACCGTTGAGCTACCGTGGAGCCGATGTATTTCTCTTAGCGTTCTCGCTCATAAGCAAGGCTAGCTATGAAAATGTGGCCAAGAAATGGATTCCTGAACTGAGGCACTATGCTCCTGGTGTACCAGTTATTCTTGTCGGGACTAAGCTTGACCTTCGAGAAGATAAACAGTACCTGATCGAACACCCGGGGGTAGTCCCCATTACCACGTCCCAGGGGGAGGAACTCAGAAAACTAATCGGTGCCCCAGTTTACATCGAATGCAGTTCGAAAACACAGCAAAATGTGAAAGCCGTGTTCGATGCAGCGATCAAAGTGGTTCTCCAGCCTCCAAAGCGGAAGAAGCGAAAGAAGCGAAAGGCACAGAAGTCGTGTTCTATATTATGATGCAAAATTAGTCGTTTGTATCACAACCGGTTAGAACTCGAAGACGTATTAGTAAGCTACTACTCATCATTTAGCCCCTAACTATCACTATATATATGAGTTATATTTTCAAATCGTCCTTGACGCAACCCCGCGATCGATCGAGCAGCAAATCTCATCGTCTGTGCTATGATTTGTAAAAAGTGTTATGAATTCATCTGTTTGTAATATGCGTGCTGATAGTATATGTTCAAGTTTAGATATCGTCTATGAAACTGATTCTCGAGTTAGTATCGTGTAGCTCGACGCTGTATGTCGTCCTGCTTTGATCTATTGTAATGTTCTTGGACGCTTTTCGTCTACCAGCTGAGCTGGTTAGAAAGCTTTCCATTGATTGACATTTTGAAACTTTGGTTTTTCTGGCTTTGGATTAATGTTGACTGAACAATATATTATAGGCTTGTAATATGAACTGATTTTCGAGCACTTCGTATATATGTCGTATGATATTATCCTGTTT

Coding sequence (CDS)

ATGAGTGTTTCCAGGTTTATTAAGTGTGTTACCGTTGGCGATGGTGCTGTTGGGAAGACTTGTATGCTTATCTCCTACACCAGCAACACTTTCCCCACCGATTACGTGCCGACCGTTTTCGACAATTTTAGTGCAAATGTAGTTGTGGATGGCAGTACTGTCAACCTGGGCTTGTGGGATACTGCTGGTATGTTCAAAACAAGTCTTTACATAACATGTTTTCTTGCTGAAAGTCTGATGTGTATGAGTCATGAACCAGGCCAGGAAGATTACAATAGGTTGAGACCGTTGAGCTACCGTGGAGCCGATGTATTTCTCTTAGCGTTCTCGCTCATAAGCAAGGCTAGCTATGAAAATGTGGCCAAGAAATGGATTCCTGAACTGAGGCACTATGCTCCTGGTGTACCAGTTATTCTTGTCGGGACTAAGCTTGACCTTCGAGAAGATAAACAGTACCTGATCGAACACCCGGGGGTAGTCCCCATTACCACGTCCCAGGGGGAGGAACTCAGAAAACTAATCGGTGCCCCAGTTTACATCGAATGCAGTTCGAAAACACAGCAAAATGTGAAAGCCGTGTTCGATGCAGCGATCAAAGTGGTTCTCCAGCCTCCAAAGCGGAAGAAGCGAAAGAAGCGAAAGGCACAGAAGTCGTGTTCTATATTATGA

Protein sequence

MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL

Homology

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BLAST of Cp4.1LG05g13670 vs. ExPASy Swiss-Prot
Match: O04369 (Rac-like GTP-binding protein RAC1 OS=Lotus japonicus OX=34305 GN=RAC1 PE=2 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 8.6e-98
Identity = 182/222 (81.98%), Postives = 192/222 (86.49%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFILAFSLISKASYENI 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           AKKWIPELRHYAPGVP+ILVGTKLDLR+DK +L +HPG VPITT+QGEELRKLIGAP YI
Sbjct: 121 AKKWIPELRHYAPGVPIILVGTKLDLRDDKHFLADHPGAVPITTAQGEELRKLIGAPAYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 223
           ECSSKTQQNVKAVFDAAIKVVLQPPK+KK KKR+AQKSCSIL
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKQKK-KKREAQKSCSIL 197

[Close]

BLAST of Cp4.1LG05g13670 vs. ExPASy Swiss-Prot
Match: Q38912 (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.5e-97
Identity = 175/222 (78.83%), Postives = 191/222 (86.04%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLVSKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           +KKW+PELRHYAPGVP+ILVGTKLDLR+DKQ+  EHPG VPI+T+QGEEL+KLIGAP YI
Sbjct: 121 SKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 223
           ECS+KTQQNVKAVFDAAIKVVLQPPK KK+KKRK+QK CSIL
Sbjct: 181 ECSAKTQQNVKAVFDAAIKVVLQPPKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. ExPASy Swiss-Prot
Match: Q6EP31 (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 PE=2 SV=2)

HSP 1 Score: 353.6 bits (906), Expect = 1.6e-96
Identity = 179/222 (80.63%), Postives = 191/222 (86.04%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSLISKASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           +KKWIPELRHYAPGVP+ILVGTKLDLR+DKQ+ ++HPG VPI+T+QGEELRKLIGA  YI
Sbjct: 121 SKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 223
           ECSSKTQQN+KAVFDAAIKVVLQPPK+KK KK+KAQK C+IL
Sbjct: 181 ECSSKTQQNIKAVFDAAIKVVLQPPKQKK-KKKKAQKGCAIL 197

[Close]

BLAST of Cp4.1LG05g13670 vs. ExPASy Swiss-Prot
Match: Q39435 (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.7e-96
Identity = 178/222 (80.18%), Postives = 191/222 (86.04%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVF+LAFSLISKASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFILAFSLISKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           +KKWIPEL+HYAPGVP++LVGTKLDLR+DKQ+ I+HPG VPITT+QGEELRKLIGAP YI
Sbjct: 121 SKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 223
           ECSSKTQQNVKAVFDAAIKVVLQPPK KK KK KAQK+CSIL
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKTKK-KKSKAQKACSIL 197

[Close]

BLAST of Cp4.1LG05g13670 vs. ExPASy Swiss-Prot
Match: P92978 (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana OX=3702 GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 4.0e-95
Identity = 175/222 (78.83%), Postives = 191/222 (86.04%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVF+LAFSLISKASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFILAFSLISKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           +KKWIPEL+HYAPGVP++LVGTKLDLR+DKQ+ I+HPG VPITT+QGEELRK IGAP YI
Sbjct: 121 SKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 223
           ECSSKTQ+NVKAVFDAAI+VVLQPPK+KK KK KAQK+CSIL
Sbjct: 181 ECSSKTQENVKAVFDAAIRVVLQPPKQKK-KKSKAQKACSIL 197

[Close]

BLAST of Cp4.1LG05g13670 vs. NCBI nr
Match: KAG7027016.1 (Rac-like GTP-binding protein RAC1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 445 bits (1144), Expect = 1.44e-157
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV
Sbjct: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI
Sbjct: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 222
           ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 222

[Close]

BLAST of Cp4.1LG05g13670 vs. NCBI nr
Match: XP_022947397.1 (rac-like GTP-binding protein RAC1 [Cucurbita moschata] >XP_022971108.1 rac-like GTP-binding protein RAC1 [Cucurbita maxima] >XP_023533345.1 rac-like GTP-binding protein RAC1 [Cucurbita pepo subsp. pepo] >KAG6604937.1 Rac-like GTP-binding protein RAC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 381 bits (978), Expect = 1.23e-132
Identity = 198/222 (89.19%), Postives = 198/222 (89.19%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSLISKASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI
Sbjct: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 222
           ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. NCBI nr
Match: XP_038902146.1 (rac-like GTP-binding protein RAC1 [Benincasa hispida])

HSP 1 Score: 375 bits (964), Expect = 1.68e-130
Identity = 193/222 (86.94%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLISRASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPG+VPITT+QGEELRKLIGAPVYI
Sbjct: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGIVPITTAQGEELRKLIGAPVYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 222
           ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRK QK+CSIL
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKGQKTCSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. NCBI nr
Match: XP_004147042.1 (rac-like GTP-binding protein RAC1 [Cucumis sativus] >XP_008457691.1 PREDICTED: rac-like GTP-binding protein RAC1 [Cucumis melo] >XP_008457692.1 PREDICTED: rac-like GTP-binding protein RAC1 [Cucumis melo] >XP_011649289.1 rac-like GTP-binding protein RAC1 [Cucumis sativus] >KAA0045737.1 rac-like GTP-binding protein RAC1 [Cucumis melo var. makuwa] >KGN61933.1 hypothetical protein Csa_006714 [Cucumis sativus] >TYJ99544.1 rac-like GTP-binding protein RAC1 [Cucumis melo var. makuwa])

HSP 1 Score: 374 bits (961), Expect = 4.80e-130
Identity = 193/222 (86.94%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLISRASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           AKKWIPELRHYAPGVPVILVGTKLDLREDKQYL EHPG+VPITT+QGEELRKLIGAPVYI
Sbjct: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLNEHPGIVPITTAQGEELRKLIGAPVYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 222
           ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQK+CSIL
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. NCBI nr
Match: XP_022146132.1 (rac-like GTP-binding protein RAC1 [Momordica charantia])

HSP 1 Score: 374 bits (960), Expect = 6.82e-130
Identity = 192/222 (86.49%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSLIS+ASYEN+
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLISRASYENI 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITT+QGEELRKLIGAP+YI
Sbjct: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTAQGEELRKLIGAPMYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 222
           ECSSKTQQNVKAVFDAAIKVVLQPPKRKK+KKRK QKSCSIL
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKQKKRKTQKSCSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. ExPASy TrEMBL
Match: A0A6J1I5W1 (rac-like GTP-binding protein RAC1 OS=Cucurbita maxima OX=3661 GN=LOC111469876 PE=3 SV=1)

HSP 1 Score: 381 bits (978), Expect = 5.96e-133
Identity = 198/222 (89.19%), Postives = 198/222 (89.19%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSLISKASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI
Sbjct: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 222
           ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. ExPASy TrEMBL
Match: A0A6J1G6C3 (rac-like GTP-binding protein RAC1 OS=Cucurbita moschata OX=3662 GN=LOC111451274 PE=3 SV=1)

HSP 1 Score: 381 bits (978), Expect = 5.96e-133
Identity = 198/222 (89.19%), Postives = 198/222 (89.19%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSLISKASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI
Sbjct: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 222
           ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. ExPASy TrEMBL
Match: A0A1S3C7E5 (rac-like GTP-binding protein RAC1 OS=Cucumis melo OX=3656 GN=LOC103497331 PE=3 SV=1)

HSP 1 Score: 374 bits (961), Expect = 2.32e-130
Identity = 193/222 (86.94%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLISRASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           AKKWIPELRHYAPGVPVILVGTKLDLREDKQYL EHPG+VPITT+QGEELRKLIGAPVYI
Sbjct: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLNEHPGIVPITTAQGEELRKLIGAPVYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 222
           ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQK+CSIL
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. ExPASy TrEMBL
Match: A0A5D3BKK0 (Rac-like GTP-binding protein RAC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001120 PE=3 SV=1)

HSP 1 Score: 374 bits (961), Expect = 2.32e-130
Identity = 193/222 (86.94%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLISRASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           AKKWIPELRHYAPGVPVILVGTKLDLREDKQYL EHPG+VPITT+QGEELRKLIGAPVYI
Sbjct: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLNEHPGIVPITTAQGEELRKLIGAPVYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 222
           ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQK+CSIL
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. ExPASy TrEMBL
Match: A0A0A0LJG3 (Rac-type small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_2G270750 PE=3 SV=1)

HSP 1 Score: 374 bits (961), Expect = 2.32e-130
Identity = 193/222 (86.94%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLISRASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           AKKWIPELRHYAPGVPVILVGTKLDLREDKQYL EHPG+VPITT+QGEELRKLIGAPVYI
Sbjct: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLNEHPGIVPITTAQGEELRKLIGAPVYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 222
           ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQK+CSIL
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. TAIR 10
Match: AT4G35020.1 (RAC-like 3 )

HSP 1 Score: 356.3 bits (913), Expect = 1.8e-98
Identity = 175/222 (78.83%), Postives = 191/222 (86.04%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLVSKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           +KKW+PELRHYAPGVP+ILVGTKLDLR+DKQ+  EHPG VPI+T+QGEEL+KLIGAP YI
Sbjct: 121 SKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 223
           ECS+KTQQNVKAVFDAAIKVVLQPPK KK+KKRK+QK CSIL
Sbjct: 181 ECSAKTQQNVKAVFDAAIKVVLQPPKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. TAIR 10
Match: AT4G35020.2 (RAC-like 3 )

HSP 1 Score: 356.3 bits (913), Expect = 1.8e-98
Identity = 175/222 (78.83%), Postives = 191/222 (86.04%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLVSKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           +KKW+PELRHYAPGVP+ILVGTKLDLR+DKQ+  EHPG VPI+T+QGEEL+KLIGAP YI
Sbjct: 121 SKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 223
           ECS+KTQQNVKAVFDAAIKVVLQPPK KK+KKRK+QK CSIL
Sbjct: 181 ECSAKTQQNVKAVFDAAIKVVLQPPKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. TAIR 10
Match: AT4G35020.3 (RAC-like 3 )

HSP 1 Score: 356.3 bits (913), Expect = 1.8e-98
Identity = 175/222 (78.83%), Postives = 191/222 (86.04%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFLLAFSLVSKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           +KKW+PELRHYAPGVP+ILVGTKLDLR+DKQ+  EHPG VPI+T+QGEEL+KLIGAP YI
Sbjct: 121 SKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 223
           ECS+KTQQNVKAVFDAAIKVVLQPPK KK+KKRK+QK CSIL
Sbjct: 181 ECSAKTQQNVKAVFDAAIKVVLQPPKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of Cp4.1LG05g13670 vs. TAIR 10
Match: AT1G75840.1 (RAC-like GTP binding protein 5 )

HSP 1 Score: 349.0 bits (894), Expect = 2.8e-96
Identity = 174/214 (81.31%), Postives = 186/214 (86.92%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVF+LAFSLISKASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFILAFSLISKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           AKKWIPELRHYAPGVP+ILVGTKLDLR+DKQ+ I+HPG VPITT+QGEEL+KLIG+P+YI
Sbjct: 121 AKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRK 215
           ECSSKTQQNVKAVFDAAIKVVLQPPK+KK+KK K
Sbjct: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKQKKKKKNK 190

[Close]

BLAST of Cp4.1LG05g13670 vs. TAIR 10
Match: AT3G51300.1 (RHO-related protein from plants 1 )

HSP 1 Score: 349.0 bits (894), Expect = 2.8e-96
Identity = 175/222 (78.83%), Postives = 191/222 (86.04%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGMFKTSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 120
           TA                        GQEDYNRLRPLSYRGADVF+LAFSLISKASYENV
Sbjct: 61  TA------------------------GQEDYNRLRPLSYRGADVFILAFSLISKASYENV 120

Query: 121 AKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEELRKLIGAPVYI 180
           +KKWIPEL+HYAPGVP++LVGTKLDLR+DKQ+ I+HPG VPITT+QGEELRK IGAP YI
Sbjct: 121 SKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYI 180

Query: 181 ECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 223
           ECSSKTQ+NVKAVFDAAI+VVLQPPK+KK KK KAQK+CSIL
Sbjct: 181 ECSSKTQENVKAVFDAAIRVVLQPPKQKK-KKSKAQKACSIL 197

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g13670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04369	8.6e-98	81.98	Rac-like GTP-binding protein RAC1 OS=Lotus japonicus OX=34305 GN=RAC1 PE=2 SV=1	[more]
Q38912	2.5e-97	78.83	Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1...	[more]
Q6EP31	1.6e-96	80.63	Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 ...	[more]
Q39435	4.7e-96	80.18	Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1	[more]
P92978	4.0e-95	78.83	Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana OX=3702 GN=ARAC11 PE...	[more]

BLAST of Cp4.1LG05g13670 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027016.1	1.44e-157	100.00	Rac-like GTP-binding protein RAC1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022947397.1	1.23e-132	89.19	rac-like GTP-binding protein RAC1 [Cucurbita moschata] >XP_022971108.1 rac-like ...	[more]
XP_038902146.1	1.68e-130	86.94	rac-like GTP-binding protein RAC1 [Benincasa hispida]	[more]
XP_004147042.1	4.80e-130	86.94	rac-like GTP-binding protein RAC1 [Cucumis sativus] >XP_008457691.1 PREDICTED: r...	[more]
XP_022146132.1	6.82e-130	86.49	rac-like GTP-binding protein RAC1 [Momordica charantia]	[more]

BLAST of Cp4.1LG05g13670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I5W1	5.96e-133	89.19	rac-like GTP-binding protein RAC1 OS=Cucurbita maxima OX=3661 GN=LOC111469876 PE...	[more]
A0A6J1G6C3	5.96e-133	89.19	rac-like GTP-binding protein RAC1 OS=Cucurbita moschata OX=3662 GN=LOC111451274 ...	[more]
A0A1S3C7E5	2.32e-130	86.94	rac-like GTP-binding protein RAC1 OS=Cucumis melo OX=3656 GN=LOC103497331 PE=3 S...	[more]
A0A5D3BKK0	2.32e-130	86.94	Rac-like GTP-binding protein RAC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LJG3	2.32e-130	86.94	Rac-type small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_2G270750 PE...	[more]

BLAST of Cp4.1LG05g13670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35020.1	1.8e-98	78.83	RAC-like 3	[more]
AT4G35020.2	1.8e-98	78.83	RAC-like 3	[more]
AT4G35020.3	1.8e-98	78.83	RAC-like 3	[more]
AT1G75840.1	2.8e-96	81.31	RAC-like GTP binding protein 5	[more]
AT3G51300.1	2.8e-96	78.83	RHO-related protein from plants 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 133..146 score: 50.29 coord: 179..201 score: 34.52 coord: 30..46 score: 32.14 coord: 47..69 score: 38.28 coord: 7..28 score: 44.74
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..204 e-value: 2.1E-11 score: 44.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..204 e-value: 1.9E-15 score: 67.3
None	No IPR available	PANTHER	PTHR24072:SF336	RAC-LIKE GTP-BINDING PROTEIN 5	coord: 1..64
None	No IPR available	PANTHER	PTHR24072:SF336	RAC-LIKE GTP-BINDING PROTEIN 5	coord: 85..222
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..222 score: 17.761255
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..201 score: 23.921665
None	No IPR available	CDD	cd04133	Rop_like	coord: 6..202 e-value: 1.63924E-132 score: 368.019
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..204 e-value: 6.1E-102 score: 354.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..64 e-value: 4.0E-18 score: 65.5 coord: 87..202 e-value: 3.2E-25 score: 88.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..222 score: 15.235906
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..65 e-value: 9.0E-15 score: 52.8 coord: 86..195 e-value: 1.6E-14 score: 52.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..216 e-value: 2.4E-68 score: 231.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..202
IPR003578	Small GTPase Rho	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 1..64
IPR003578	Small GTPase Rho	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 85..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g13670.1	Cp4.1LG05g13670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007015	actin filament organization
biological_process	GO:0030865	cortical cytoskeleton organization
biological_process	GO:0007163	establishment or maintenance of cell polarity
biological_process	GO:0032956	regulation of actin cytoskeleton organization
biological_process	GO:0008360	regulation of cell shape
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0042995	cell projection
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0004767	sphingomyelin phosphodiesterase activity