Cp4.1LG05g13550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g13550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Cytokinin riboside 5'-monophosphate phosphoribohydrolase
Location	Cp4.1LG05: 9513004 .. 9514987 (-)
RNA-Seq Expression	Cp4.1LG05g13550
Synteny	Cp4.1LG05g13550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCTATTTGTTGAAATAGAATGTAGTTGAAAAAGTAACAGGGAAGGACAATTGTTGCAGCATTTGTTTATATCACAAACCTACATTGCATGGTAGACTCTTTACCTTTTCCCCTCTTTTTTTCTCCTTTAACTCGTTTAACTCTTCTTTCAGAGACTACACGGACTTTTTGGACATAATGTGGCGTTAATATAAAGCGGCTATTCCCTAACATCCGAGTGGCCTATAGCAGAGTGAAATCGAAACTTTCCCCTGTATGTACATGTTCGGATATCCACATGTAAAACTGATCACGTAGCTCCTCTTGGCAGAAACCAGAGCAGTGAAATGGAAGGGAAGGTAGTAAAGTCCAGGTTCAAAAGGGTTTGCGTGTTTTGTGGGAGCAGCACAGGAAAGAGAGGCTGCTATAGAGATGCAGCCATTGATTTAGCTCAGGAGCTGGTATTTCTTTGAATATCTCTCTCTTTTATCCATTTTCAAAAGCTTCTTGATGTTTTTCTCTTCCCCTCTCTCTCTTCCATTCTTTATATGCATATATATTACACTGTATTTTCTCTGTGAAGATTTCAAGAAGGTTGGAGCTTGTTTATGGAGGTGGGAGTATTGGGCTAATGGGTCTGGTTTCACAAGCTGTTCATTGTGGTGGAGGGAGAGTCATGGGGTAAGTGATCCAAAGCACTTTTGTGAGATCCCACGTCGGTTGGGGAGAAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCAAGCAACGCGTTTTAAACTTCTATTATGTACATGTTTGAGGTTTCAAAGCATGCTTTGGTTTTGTTCATTTGCAGGATCATTCCTAGGACACTAATGAACAAAGAGGTGAGAAGCATATCAATACCGTAATTTGTTGAATTTTGTTTTGGCTTAATCAAAGTTGTAGCTAAAACTTAACTTGATTCTTCCTCTCTAAAAAAACGATCATTTCCTGGGGGGAAAACTACAGATAACTGGTGAAACAGTAGGAGAGGTAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATTGCCCTACCAGGTTCCATCAACCCCTTTAACCTTTCCTATTCAGAAACACAATTCCACAATTCTTCTTTTTTTTTTATCCTTATTGCACTGATTTTCAGGTGGGTATGGAACTATGGAAGAACTTTTAGAAGTAATCACTTGGGCTCAACTAGGCATCCATGACAAACCAGTAAATTCAAAAAAACAGATTACCACAAGTTTCATTTCGATCTCCCCTTAAAGTTCCTTCAGCAAATTCTCATTCTCAGGTTGGCTTGCTGAATGTAGACGGCTACTACAACTACCTCCTCACTTTCATCGACCAAGCAGTGGAAGATGGATTCATAAAACCATCACAACGCAACATCATAGTGTCCGCACACAACGCCAAGGACCTGGTTCAGAAACTAGAGGTCAGTGATTCAGTCAGACATTTCGTCGAACAGTTGGTGGGCATATTTTAAAATTCCACAATTTGAAGCAGATTAAAGATTATATTCGACTCATGATTATAATGTTGGTTTGTTTAGGAGTACGTGCCTGTACACGACGAAGTGATAGCCAAATCGAGATGGGAAATTGAGCAGCCACCACAACAACAACAGCATCAGCAGCAAAAACAAGTGGGGTTCGAACCCAAAACTTTCCATGCTCAAATCACCCTGTAAAGTGGAAACTTGAAAACAAAAAGGAGAAAAAGATTCCGTGAATGAAATTGAAAGCAGGTGTTTTTTTTGAGGTGAATTTGGGTCATCACCGACCGTTCTATAATTGGGTGGGACATTCTCTTTTTGTTTGTAAGCTTATGAGAATTAAGGGGAAAAAATCGAGTACTAGTAGAAATTCTTGTATTTGAAGCCTAAAATTTGGTTATCCAAAATTTGTATTAATCTTACTCCATCCCTACTGTTTGGATTATATATTTGGATTATATA

mRNA sequence

TTTCCTATTTGTTGAAATAGAATGTAGTTGAAAAAGTAACAGGGAAGGACAATTGTTGCAGCATTTGTTTATATCACAAACCTACATTGCATGAGACTACACGGACTTTTTGGACATAATGTGGCGTTAATATAAAGCGGCTATTCCCTAACATCCGAGTGGCCTATAGCAGAGTGAAATCGAAACTTTCCCCTGTATGTACATGTTCGGATATCCACATGTAAAACTGATCACGTAGCTCCTCTTGGCAGAAACCAGAGCAGTGAAATGGAAGGGAAGGTAGTAAAGTCCAGGTTCAAAAGGGTTTGCGTGTTTTGTGGGAGCAGCACAGGAAAGAGAGGCTGCTATAGAGATGCAGCCATTGATTTAGCTCAGGAGCTGATTTCAAGAAGGTTGGAGCTTGTTTATGGAGGTGGGAGTATTGGGCTAATGGGTCTGATAACTGGTGAAACAGTAGGAGAGGTAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATTGCCCTACCAGGTGGGTATGGAACTATGGAAGAACTTTTAGAAGTAATCACTTGGGCTCAACTAGGCATCCATGACAAACCAGTTGGCTTGCTGAATGTAGACGGCTACTACAACTACCTCCTCACTTTCATCGACCAAGCAGAGTACGTGCCTGTACACGACGAAGTGATAGCCAAATCGAGATGGGAAATTGAGCAGCCACCACAACAACAACAGCATCAGCAGCAAAAACAAGTGGGGTTCGAACCCAAAACTTTCCATGCTCAAATCACCCTGTAAAGTGGAAACTTGAAAACAAAAAGGAGAAAAAGATTCCGTGAATGAAATTGAAAGCAGGTGTTTTTTTTGAGGTGAATTTGGGTCATCACCGACCGTTCTATAATTGGGTGGGACATTCTCTTTTTGTTTGTAAGCTTATGAGAATTAAGGGGAAAAAATCGAGTACTAGTAGAAATTCTTGTATTTGAAGCCTAAAATTTGGTTATCCAAAATTTGTATTAATCTTACTCCATCCCTACTGTTTGGATTATATATTTGGATTATATA

Coding sequence (CDS)

ATGGAAGGGAAGGTAGTAAAGTCCAGGTTCAAAAGGGTTTGCGTGTTTTGTGGGAGCAGCACAGGAAAGAGAGGCTGCTATAGAGATGCAGCCATTGATTTAGCTCAGGAGCTGATTTCAAGAAGGTTGGAGCTTGTTTATGGAGGTGGGAGTATTGGGCTAATGGGTCTGATAACTGGTGAAACAGTAGGAGAGGTAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATTGCCCTACCAGGTGGGTATGGAACTATGGAAGAACTTTTAGAAGTAATCACTTGGGCTCAACTAGGCATCCATGACAAACCAGTTGGCTTGCTGAATGTAGACGGCTACTACAACTACCTCCTCACTTTCATCGACCAAGCAGAGTACGTGCCTGTACACGACGAAGTGATAGCCAAATCGAGATGGGAAATTGAGCAGCCACCACAACAACAACAGCATCAGCAGCAAAAACAAGTGGGGTTCGAACCCAAAACTTTCCATGCTCAAATCACCCTGTAA

Protein sequence

MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQAEYVPVHDEVIAKSRWEIEQPPQQQQHQQQKQVGFEPKTFHAQITL

Homology

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BLAST of Cp4.1LG05g13550 vs. ExPASy Swiss-Prot
Match: Q8LBB7 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 OS=Arabidopsis thaliana OX=3702 GN=LOG5 PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 8.6e-64
Identity = 132/212 (62.26%), Postives = 144/212 (67.92%), Query Frame = 0


Query: 4   KVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL------ 63
           ++VKSRFKRVCVFCGSS+GKR CY DAA DLAQEL++RRL LVYGGGSIGLMGL      
Sbjct: 2   EIVKSRFKRVCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAVH 61

Query: 64  ------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEEL 123
                             ITGET GEV  V +MH+RKAEMARHSDCFIALPGGYGT+EEL
Sbjct: 62  EAGGHVLGIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEEL 121

Query: 124 LEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA------------------------- 164
           LEVI WAQLGIHDKPVGLLNVDGYYNYLLTFID+A                         
Sbjct: 122 LEVIAWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQ 181

[Close]

BLAST of Cp4.1LG05g13550 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.5e-55
Identity = 112/199 (56.28%), Postives = 130/199 (65.33%), Query Frame = 0


Query: 7   KSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLI-------- 66
           KS+F+R+CVFCGSS GK+  Y+DAA+DL  EL+SR ++LVYGGGSIGLMGL+        
Sbjct: 10  KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG 69

Query: 67  ----------------TGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEV 126
                           TGETVGEVR V +MHQRKAEMA+HSD FIALPGGYGT+EELLEV
Sbjct: 70  RHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEV 129

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------------- 154
           ITWAQLGIHDKPVGLLNVDGYYN LL+FID+A                            
Sbjct: 130 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKKLE 189

[Close]

BLAST of Cp4.1LG05g13550 vs. ExPASy Swiss-Prot
Match: Q8H7U8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL3 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.3e-55
Identity = 114/196 (58.16%), Postives = 127/196 (64.80%), Query Frame = 0


Query: 7   KSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLIT------- 66
           +SRFKR CVFCGSS G +  YRDAA+DLA+EL++R ++LVYGGGSIGLMGL++       
Sbjct: 10  ESRFKRTCVFCGSSQGNKTTYRDAAVDLAKELVARGIDLVYGGGSIGLMGLVSQAVYDGG 69

Query: 67  -----------------GETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEV 126
                            GETVGEVRPV +MHQRKAEMAR SD FIALPGGYGT+EELLEV
Sbjct: 70  RHVIGVIPKTLMTPEIIGETVGEVRPVSDMHQRKAEMARQSDAFIALPGGYGTLEELLEV 129

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------------- 151
           ITWAQLGIH KPVGLLNVDGYYN LLTFIDQA                            
Sbjct: 130 ITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQAVEEGFISPSARRIIVSAPTAQELMDKLE 189

[Close]

BLAST of Cp4.1LG05g13550 vs. ExPASy Swiss-Prot
Match: Q7XDB8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL10 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.3e-55
Identity = 114/197 (57.87%), Postives = 128/197 (64.97%), Query Frame = 0


Query: 7   KSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--------- 66
           +SRFKR+CVFCGSS GK+  Y DAAI+L  EL++R ++LVYGGGSIGLMGL         
Sbjct: 3   QSRFKRICVFCGSSQGKKRSYHDAAIELGNELVARSIDLVYGGGSIGLMGLVSQAVFDGG 62

Query: 67  ---------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEV 126
                          I+GETVGEVRPV +MHQRKAEMAR SD FIALPGGYGT+EELLEV
Sbjct: 63  RHVIGVIPKTLMTPEISGETVGEVRPVADMHQRKAEMARQSDAFIALPGGYGTLEELLEV 122

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------------- 152
           ITWAQLGIH KPVGLLNVDGYYN LLTFID+A                            
Sbjct: 123 ITWAQLGIHHKPVGLLNVDGYYNSLLTFIDKAVEEGFINTSARRIIVMAPTAEELMDKLE 182

[Close]

BLAST of Cp4.1LG05g13550 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.3e-55
Identity = 111/200 (55.50%), Postives = 133/200 (66.50%), Query Frame = 0


Query: 6   VKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL-------- 65
           ++S+FKR+CVFCGSS G +  Y+DAAI+L  EL+SR ++LVYGGGSIGLMGL        
Sbjct: 3   IESKFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNG 62

Query: 66  ----------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLE 125
                           ITGETVGEV+ V +MHQRKAEMA+HSD FIALPGGYGT+EELLE
Sbjct: 63  GRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLE 122

Query: 126 VITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA--------------------------- 154
           VITWAQLGIHDKPVGLLNV+GYYN LL+FID+A                           
Sbjct: 123 VITWAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKKL 182

[Close]

BLAST of Cp4.1LG05g13550 vs. NCBI nr
Match: XP_023532490.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342 bits (876), Expect = 2.44e-117
Identity = 179/231 (77.49%), Postives = 179/231 (77.49%), Query Frame = 0


Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL   
Sbjct: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLVSQ 60

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 61  AVHCGGGRVMGIIPRTLMNKEITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 179
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA                      
Sbjct: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQAVEDGFIKPSQRNIIVSAHNAKD 180

[Close]

BLAST of Cp4.1LG05g13550 vs. NCBI nr
Match: XP_022947702.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita moschata])

HSP 1 Score: 333 bits (853), Expect = 1.41e-113
Identity = 175/231 (75.76%), Postives = 176/231 (76.19%), Query Frame = 0


Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGKVVKSRFKRVCVFCGSSTGKR CYRDAAIDLAQELISRRLELVYGGGSIGLMGL   
Sbjct: 18  MEGKVVKSRFKRVCVFCGSSTGKRDCYRDAAIDLAQELISRRLELVYGGGSIGLMGLVSQ 77

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPV+NMHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 78  AVHRGGGRVMGIIPRTLMNKEITGETVGEVRPVNNMHQRKAEMARHSDCFIALPGGYGTM 137

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 179
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA                      
Sbjct: 138 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQAVEDGFIKPSQRNIIVSAHNAKD 197

[Close]

BLAST of Cp4.1LG05g13550 vs. NCBI nr
Match: XP_022971081.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita maxima])

HSP 1 Score: 333 bits (853), Expect = 1.51e-113
Identity = 177/233 (75.97%), Postives = 178/233 (76.39%), Query Frame = 0


Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL   
Sbjct: 18  MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLVSQ 77

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPVD+MHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 78  AVHRGGGRVMGIIPRTLMHKEITGETVGEVRPVDSMHQRKAEMARHSDCFIALPGGYGTM 137

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 179
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA                      
Sbjct: 138 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQAVEDGFIKPSQRNIIVSAHNAKD 197

[Close]

BLAST of Cp4.1LG05g13550 vs. NCBI nr
Match: KAG6604958.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312 bits (800), Expect = 6.29e-106
Identity = 165/220 (75.00%), Postives = 165/220 (75.00%), Query Frame = 0


Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGK VKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL   
Sbjct: 1   MEGKEVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLVSQ 60

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 61  AVHRGGGRVMGIIPRTLMNKEITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 168
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA                      
Sbjct: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQAVEDGFIKPSQRNIIVSAHNAKD 180

[Close]

BLAST of Cp4.1LG05g13550 vs. NCBI nr
Match: XP_038902735.1 (LOW QUALITY PROTEIN: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Benincasa hispida])

HSP 1 Score: 304 bits (779), Expect = 2.59e-102
Identity = 162/231 (70.13%), Postives = 168/231 (72.73%), Query Frame = 0


Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGKVV+SRFKRVCVFCGSSTGKR CYRDAAIDLAQEL+SRRL LVYGGGSIGLMGL   
Sbjct: 23  MEGKVVRSRFKRVCVFCGSSTGKRDCYRDAAIDLAQELVSRRLGLVYGGGSIGLMGLVSQ 82

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 83  AVYRGGGRVMGIIPRTLMNKEITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 142

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 179
           EELLEVITWAQLGIHDKPVGLLNV+GYYN LLTFIDQA                      
Sbjct: 143 EELLEVITWAQLGIHDKPVGLLNVEGYYNNLLTFIDQAVDDGFIKPSQRNIIVSAPNAKD 202

[Close]

BLAST of Cp4.1LG05g13550 vs. ExPASy TrEMBL
Match: A0A6J1G766 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111451489 PE=3 SV=1)

HSP 1 Score: 333 bits (853), Expect = 6.81e-114
Identity = 175/231 (75.76%), Postives = 176/231 (76.19%), Query Frame = 0


Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGKVVKSRFKRVCVFCGSSTGKR CYRDAAIDLAQELISRRLELVYGGGSIGLMGL   
Sbjct: 18  MEGKVVKSRFKRVCVFCGSSTGKRDCYRDAAIDLAQELISRRLELVYGGGSIGLMGLVSQ 77

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPV+NMHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 78  AVHRGGGRVMGIIPRTLMNKEITGETVGEVRPVNNMHQRKAEMARHSDCFIALPGGYGTM 137

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 179
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA                      
Sbjct: 138 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQAVEDGFIKPSQRNIIVSAHNAKD 197

[Close]

BLAST of Cp4.1LG05g13550 vs. ExPASy TrEMBL
Match: A0A6J1I2B6 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111469858 PE=3 SV=1)

HSP 1 Score: 333 bits (853), Expect = 7.30e-114
Identity = 177/233 (75.97%), Postives = 178/233 (76.39%), Query Frame = 0


Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL   
Sbjct: 18  MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLVSQ 77

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPVD+MHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 78  AVHRGGGRVMGIIPRTLMHKEITGETVGEVRPVDSMHQRKAEMARHSDCFIALPGGYGTM 137

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 179
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA                      
Sbjct: 138 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQAVEDGFIKPSQRNIIVSAHNAKD 197

[Close]

BLAST of Cp4.1LG05g13550 vs. ExPASy TrEMBL
Match: A0A6J1CGK5 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111011217 PE=3 SV=1)

HSP 1 Score: 304 bits (778), Expect = 1.67e-102
Identity = 162/231 (70.13%), Postives = 169/231 (73.16%), Query Frame = 0


Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGK+VKSRFKRVCVFCGSSTGKR CYRDAAIDLAQEL+SRRL LVYGGGSIGLMGL   
Sbjct: 18  MEGKIVKSRFKRVCVFCGSSTGKRDCYRDAAIDLAQELVSRRLGLVYGGGSIGLMGLVSQ 77

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVR VDNMHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 78  AVHRGGGRVIGIIPRTLMNKEITGETVGEVRSVDNMHQRKAEMARHSDCFIALPGGYGTM 137

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 179
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA                      
Sbjct: 138 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQAVDDGFIKPSQRNIIVSAPNAKD 197

[Close]

BLAST of Cp4.1LG05g13550 vs. ExPASy TrEMBL
Match: A0A0A0KB16 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_6G127300 PE=3 SV=1)

HSP 1 Score: 297 bits (761), Expect = 3.48e-100
Identity = 159/231 (68.83%), Postives = 165/231 (71.43%), Query Frame = 0


Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEG+VVKSRFKRVCVFCGSSTGKR CYRDAAIDLAQEL+SRRL LVYGGGSIGLMGL   
Sbjct: 1   MEGEVVKSRFKRVCVFCGSSTGKRDCYRDAAIDLAQELVSRRLGLVYGGGSIGLMGLVSQ 60

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGE RPVDNMHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 61  AVHHGGGRVMGIIPRTLMNKEITGETVGETRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 179
           EELLEVITWAQLGIHDKPVGLLNV+GYYN LLTFIDQA                      
Sbjct: 121 EELLEVITWAQLGIHDKPVGLLNVEGYYNNLLTFIDQAVDDGFIKPSQRKIIVSAPNAKD 180

[Close]

BLAST of Cp4.1LG05g13550 vs. ExPASy TrEMBL
Match: A0A6J1JC70 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111483713 PE=3 SV=1)

HSP 1 Score: 296 bits (759), Expect = 5.72e-100
Identity = 158/231 (68.40%), Postives = 164/231 (71.00%), Query Frame = 0


Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGKVVKSRFKRVCVFCGSSTGKR CYRDA IDLAQEL+SRRL LVYGGGSIGLMGL   
Sbjct: 1   MEGKVVKSRFKRVCVFCGSSTGKRDCYRDATIDLAQELVSRRLGLVYGGGSIGLMGLVSQ 60

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 61  AVHRGGGRVIGIIPRTLMNKEITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 179
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA                      
Sbjct: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQAVDDGFIKPSQRNIIVSAPNAKD 180

[Close]

BLAST of Cp4.1LG05g13550 vs. TAIR 10
Match: AT4G35190.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 244.6 bits (623), Expect = 6.1e-65
Identity = 132/212 (62.26%), Postives = 144/212 (67.92%), Query Frame = 0


Query: 4   KVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL------ 63
           ++VKSRFKRVCVFCGSS+GKR CY DAA DLAQEL++RRL LVYGGGSIGLMGL      
Sbjct: 2   EIVKSRFKRVCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAVH 61

Query: 64  ------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEEL 123
                             ITGET GEV  V +MH+RKAEMARHSDCFIALPGGYGT+EEL
Sbjct: 62  EAGGHVLGIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEEL 121

Query: 124 LEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA------------------------- 164
           LEVI WAQLGIHDKPVGLLNVDGYYNYLLTFID+A                         
Sbjct: 122 LEVIAWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQ 181

[Close]

BLAST of Cp4.1LG05g13550 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-56
Identity = 112/199 (56.28%), Postives = 130/199 (65.33%), Query Frame = 0


Query: 7   KSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLI-------- 66
           KS+F+R+CVFCGSS GK+  Y+DAA+DL  EL+SR ++LVYGGGSIGLMGL+        
Sbjct: 10  KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG 69

Query: 67  ----------------TGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEV 126
                           TGETVGEVR V +MHQRKAEMA+HSD FIALPGGYGT+EELLEV
Sbjct: 70  RHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEV 129

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------------- 154
           ITWAQLGIHDKPVGLLNVDGYYN LL+FID+A                            
Sbjct: 130 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKKLE 189

[Close]

BLAST of Cp4.1LG05g13550 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 214.9 bits (546), Expect = 5.2e-56
Identity = 111/200 (55.50%), Postives = 133/200 (66.50%), Query Frame = 0


Query: 6   VKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL-------- 65
           ++S+FKR+CVFCGSS G +  Y+DAAI+L  EL+SR ++LVYGGGSIGLMGL        
Sbjct: 3   IESKFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNG 62

Query: 66  ----------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLE 125
                           ITGETVGEV+ V +MHQRKAEMA+HSD FIALPGGYGT+EELLE
Sbjct: 63  GRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLE 122

Query: 126 VITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA--------------------------- 154
           VITWAQLGIHDKPVGLLNV+GYYN LL+FID+A                           
Sbjct: 123 VITWAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKKL 182

[Close]

BLAST of Cp4.1LG05g13550 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 214.2 bits (544), Expect = 8.8e-56
Identity = 113/199 (56.78%), Postives = 128/199 (64.32%), Query Frame = 0


Query: 7   KSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLI-------- 66
           KS+F R+CVFCGSS GK+  Y+DAA+DL  EL+ R ++LVYGGGSIGLMGL+        
Sbjct: 10  KSKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGLVSQAVHDGG 69

Query: 67  ----------------TGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEV 126
                           TGETVGEVR V +MHQRKAEMARHSD FIALPGGYGT+EELLEV
Sbjct: 70  RHVIGVIPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEV 129

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------------- 154
           ITWAQLGIHDKPVGLLNVDGYYN LL+FID+A                            
Sbjct: 130 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPTAKELVKKLE 189

[Close]

BLAST of Cp4.1LG05g13550 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 205.3 bits (521), Expect = 4.1e-53
Identity = 108/196 (55.10%), Postives = 126/196 (64.29%), Query Frame = 0


Query: 7   KSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--------- 66
           KSRFKR+CVFCGSS+GK+  Y++AAI L  EL+ RR++LVYGGGS+GLMGL         
Sbjct: 5   KSRFKRICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAVHHGG 64

Query: 67  ---------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEV 126
                          ITGET+GEV+ V +MHQRKAEMAR +D FIALPGGYGT+EELLEV
Sbjct: 65  RHVLGVIPKTLMPREITGETIGEVKAVADMHQRKAEMARQADAFIALPGGYGTLEELLEV 124

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------------- 151
           ITWAQLGIH KPVGLLNVDGYYN LLTFID+A                            
Sbjct: 125 ITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELVRQLE 184

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g13550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LBB7	8.6e-64	62.26	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 OS=Arabidopsis tha...	[more]
Q8L8B8	2.5e-55	56.28	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis tha...	[more]
Q8H7U8	4.3e-55	58.16	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3 OS=Oryza...	[more]
Q7XDB8	4.3e-55	57.87	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryz...	[more]
Q8RUN2	7.3e-55	55.50	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis tha...	[more]

BLAST of Cp4.1LG05g13550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532490.1	2.44e-117	77.49	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita pe...	[more]
XP_022947702.1	1.41e-113	75.76	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita mo...	[more]
XP_022971081.1	1.51e-113	75.97	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita ma...	[more]
KAG6604958.1	6.29e-106	75.00	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5, partial [Cucurbit...	[more]
XP_038902735.1	2.59e-102	70.13	LOW QUALITY PROTEIN: cytokinin riboside 5'-monophosphate phosphoribohydrolase LO...	[more]

BLAST of Cp4.1LG05g13550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G766	6.81e-114	75.76	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata O...	[more]
A0A6J1I2B6	7.30e-114	75.97	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=...	[more]
A0A6J1CGK5	1.67e-102	70.13	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia ...	[more]
A0A0A0KB16	3.48e-100	68.83	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3...	[more]
A0A6J1JC70	5.72e-100	68.40	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=...	[more]

BLAST of Cp4.1LG05g13550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35190.1	6.1e-65	62.26	Putative lysine decarboxylase family protein	[more]
AT2G37210.1	1.8e-56	56.28	lysine decarboxylase family protein	[more]
AT2G28305.1	5.2e-56	55.50	Putative lysine decarboxylase family protein	[more]
AT3G53450.1	8.8e-56	56.78	Putative lysine decarboxylase family protein	[more]
AT5G06300.1	4.1e-53	55.10	Putative lysine decarboxylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005269	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG	TIGRFAM	TIGR00730	TIGR00730	coord: 63..133 e-value: 3.9E-28 score: 96.4
None	No IPR available	GENE3D	3.40.50.450		coord: 59..151 e-value: 1.1E-35 score: 124.9 coord: 3..58 e-value: 3.0E-16 score: 61.6
None	No IPR available	PANTHER	PTHR31223	LOG FAMILY PROTEIN YJL055W	coord: 58..134 coord: 5..58
None	No IPR available	PANTHER	PTHR31223:SF73	CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG5	coord: 58..134 coord: 5..58
None	No IPR available	SUPERFAMILY	102405	MCP/YpsA-like	coord: 9..143
IPR031100	LOG family	PFAM	PF03641	Lysine_decarbox	coord: 59..135 e-value: 1.4E-29 score: 102.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g13550.1	Cp4.1LG05g13550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009691	cytokinin biosynthetic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds