Cp4.1LG05g11410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCACATCAGGGTGCACGGGATGGGCACCGAATGAGGCATTGACCCACGCAGCAGAGTCAATCATGGGTCCATGGGAGACGATGGAAAACCCGTGTATAGGAGGAAACAAGATGTTTCGACTAGCTACATTCTTTGCTCAGAGCACATTTGTTCTTCCCCTACCTTCATATCCCAGCTTGTTTATTTTCATGGCAGACCGATGGAATCCCGCCAACCTTAGAGACTCGAGGTACATTTGGTTGCCATTGATGGTCGGAGGACTTGTCGATGAACCACTCGACTACAATTTTGGGTTCCCTTTGTGGTCAAGAGTGTCTATATATTGGCATAGAAAGTGGAAGCTTCCTAAGGGCTGGAATCCGTTGAAATGA ATGATCACATCAGGGTGCACGGGATGGGCACCGAATGAGGCATTGACCCACGCAGCAGAGTCAATCATGGGTCCATGGGAGACGATGGAAAACCCGTGTATAGGAGGAAACAAGATGTTTCGACTAGCTACATTCTTTGCTCAGAGCACATTTGTTCTTCCCCTACCTTCATATCCCAGCTTGTTTATTTTCATGGCAGACCGATGGAATCCCGCCAACCTTAGAGACTCGAGGTACATTTGGTTGCCATTGATGGTCGGAGGACTTGTCGATGAACCACTCGACTACAATTTTGGGTTCCCTTTGTGGTCAAGAGTGTCTATATATTGGCATAGAAAGTGGAAGCTTCCTAAGGGCTGGAATCCGTTGAAATGA ATGATCACATCAGGGTGCACGGGATGGGCACCGAATGAGGCATTGACCCACGCAGCAGAGTCAATCATGGGTCCATGGGAGACGATGGAAAACCCGTGTATAGGAGGAAACAAGATGTTTCGACTAGCTACATTCTTTGCTCAGAGCACATTTGTTCTTCCCCTACCTTCATATCCCAGCTTGTTTATTTTCATGGCAGACCGATGGAATCCCGCCAACCTTAGAGACTCGAGGTACATTTGGTTGCCATTGATGGTCGGAGGACTTGTCGATGAACCACTCGACTACAATTTTGGGTTCCCTTTGTGGTCAAGAGTGTCTATATATTGGCATAGAAAGTGGAAGCTTCCTAAGGGCTGGAATCCGTTGAAATGA MITSGCTGWAPNEALTHAAESIMGPWETMENPCIGGNKMFRLATFFAQSTFVLPLPSYPSLFIFMADRWNPANLRDSRYIWLPLMVGGLVDEPLDYNFGFPLWSRVSIYWHRKWKLPKGWNPLK Homology
BLAST of Cp4.1LG05g11410 vs. NCBI nr
Match: KAG6605233.1 (hypothetical protein SDJN03_02550, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 279 bits (714), Expect = 9.14e-91 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g11410 vs. NCBI nr
Match: XP_023534654.1 (uncharacterized protein LOC111796164 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023534655.1 uncharacterized protein LOC111796164 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279 bits (714), Expect = 2.69e-90 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g11410 vs. NCBI nr
Match: XP_022947844.1 (uncharacterized protein LOC111451604 [Cucurbita moschata]) HSP 1 Score: 279 bits (714), Expect = 2.69e-90 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g11410 vs. NCBI nr
Match: KAG7035199.1 (hypothetical protein SDJN02_01994, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 278 bits (710), Expect = 1.08e-89 Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g11410 vs. NCBI nr
Match: XP_023007054.1 (uncharacterized protein LOC111499658 [Cucurbita maxima]) HSP 1 Score: 275 bits (704), Expect = 8.64e-89 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0
BLAST of Cp4.1LG05g11410 vs. ExPASy TrEMBL
Match: A0A6J1G831 (uncharacterized protein LOC111451604 OS=Cucurbita moschata OX=3662 GN=LOC111451604 PE=3 SV=1) HSP 1 Score: 279 bits (714), Expect = 1.30e-90 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g11410 vs. ExPASy TrEMBL
Match: A0A6J1L3W6 (uncharacterized protein LOC111499658 OS=Cucurbita maxima OX=3661 GN=LOC111499658 PE=3 SV=1) HSP 1 Score: 275 bits (704), Expect = 4.18e-89 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0
BLAST of Cp4.1LG05g11410 vs. ExPASy TrEMBL
Match: A0A5A7TVD5 (Glycoside hydrolase, family 43 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00060 PE=3 SV=1) HSP 1 Score: 263 bits (672), Expect = 5.19e-86 Identity = 113/124 (91.13%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Cp4.1LG05g11410 vs. ExPASy TrEMBL
Match: A0A1S3C6G0 (uncharacterized protein LOC103497430 OS=Cucumis melo OX=3656 GN=LOC103497430 PE=3 SV=1) HSP 1 Score: 263 bits (672), Expect = 2.67e-84 Identity = 113/124 (91.13%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Cp4.1LG05g11410 vs. ExPASy TrEMBL
Match: A0A0A0LPY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285310 PE=3 SV=1) HSP 1 Score: 261 bits (668), Expect = 1.07e-83 Identity = 113/124 (91.13%), Postives = 121/124 (97.58%), Query Frame = 0
BLAST of Cp4.1LG05g11410 vs. TAIR 10
Match: AT3G49880.1 (glycosyl hydrolase family protein 43 ) HSP 1 Score: 223.0 bits (567), Expect = 1.3e-58 Identity = 92/117 (78.63%), Postives = 106/117 (90.60%), Query Frame = 0
BLAST of Cp4.1LG05g11410 vs. TAIR 10
Match: AT5G67540.2 (Arabinanase/levansucrase/invertase ) HSP 1 Score: 219.2 bits (557), Expect = 1.9e-57 Identity = 91/117 (77.78%), Postives = 104/117 (88.89%), Query Frame = 0
BLAST of Cp4.1LG05g11410 vs. TAIR 10
Match: AT5G67540.1 (Arabinanase/levansucrase/invertase ) HSP 1 Score: 219.2 bits (557), Expect = 1.9e-57 Identity = 91/117 (77.78%), Postives = 104/117 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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