Cp4.1LG05g11370 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG05g11370
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionred chlorophyll catabolite reductase
LocationCp4.1LG05: 7740072 .. 7741465 (+)
RNA-Seq ExpressionCp4.1LG05g11370
SyntenyCp4.1LG05g11370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAACATGGCGTTGATGGTTTATCCATCTGCAAAAGCTTTCAGTCTTCCGCCGCCGGTGGAATCCCGTTTCAGAGAATTAGTGATAAGGAACGCAGCGTCGAACATGGCGGAGAATGTGCCGATCCGGCCGGGATCGTCGTCGAAGCTGAAGGAGTTTCCGCATCTGTCGGCTTCTCACAGAGCTCTGATGACTGATCTCGTCGGCGCTGCTGAATCTCGACTCGAAGATCATCTTCTTCCTTGCACTCTTCCTCCTGATGTTGAATACTTCCAGAATCAGAACGGGACTTCGCAAGGCGCTCTTCTCATCAGATCTGGCTCGCCGGACTCTTCTGTATGTGTCTCTATGTCTCTGTCTCTTAAGAAATTTAGATAATCGAACTGTTTCGAGTGTACTCTGATCTGCTTCCAATTTTAGCGTTCCGGAATTGAGGATTTAAATTTTAAATTTCTTTCATAGTCTACGGATCGATTAGATATAAAATTGATTGTTTATGCATCTGTTAAATACTTTTTGAATCCAAATTTATCATATCTCCAACGCTTAGCATGTTAGATACCACGGATTATTGAGTTATTACATTAATCAAAATCTCTAGCGATATGTAATTGTTTTGTTAAGCATTTAAACTAAAATTCTAATGTAAGTGTTTCTAACAAATCAAGAGTATGAGATAATTGTGAAAATTTTGTAGCAGCAGAACCAAATTCAAACTAACAAATTGGTAATGAGATTGTGTTCGTTATTTAATCTATGTTTCTTAACTTTTGTGTTAGATTAATTTCATATTGGGAAGTTGGTTGCATAGCCAGCTACCAACAGGAGCATCATTAAACATAGCAAGCCTTTCTGCCTACTTGAGGCCATCAACTGATGCTCCAAACTTCCTCATAGAATTCATTCAAAGCTCTCCAACCTCCCTCATTCTCATTCTGGATCTACCTCCCAGAAAGGATCTGGTGCTCAATCCAGACTACCTTCAATTGTTCTATGAAGATACAGGATTAGACAAATACCGTAAAGCAATCGAAGAACTCCCTGAAGTACGACCATATGCCATGTCCTCTCTTTTCTTCCGCTCCTTAGTTTCCCCAACTTCCATAATTGTCCGTGTCGATACGGAATCGGGAGGACCCGAACGCATGGAGGAGATTATAGCAAACCATGTCGGTCCGGTTGCAAGAGATGTGATTCGGGTGTGGCTGGATGAATGTGCTTGCAAGGAGAGAGGGGTTGGAGAGATGGACAGAGGTAATATTGAGAAGAGGGATGAGTTGGTTAAGAAGAAAACCATTGATATAGACTTGGGTTCTAGTTTGCCAAGATTGTTTGGCCAGGAAATAGCAGATAGAGTAGTGGCAGCCATCCAACAAATCTTTGAAGCATGA

mRNA sequence

ATGCCAAACATGGCGTTGATGGTTTATCCATCTGCAAAAGCTTTCAGTCTTCCGCCGCCGGTGGAATCCCGTTTCAGAGAATTAGTGATAAGGAACGCAGCGTCGAACATGGCGGAGAATGTGCCGATCCGGCCGGGATCGTCGTCGAAGCTGAAGGAGTTTCCGCATCTGTCGGCTTCTCACAGAGCTCTGATGACTGATCTCGTCGGCGCTGCTGAATCTCGACTCGAAGATCATCTTCTTCCTTGCACTCTTCCTCCTGATGTTGAATACTTCCAGAATCAGAACGGGACTTCGCAAGGCGCTCTTCTCATCAGATCTGGCTCGCCGGACTCTTCTATTAATTTCATATTGGGAAGTTGGTTGCATAGCCAGCTACCAACAGGAGCATCATTAAACATAGCAAGCCTTTCTGCCTACTTGAGGCCATCAACTGATGCTCCAAACTTCCTCATAGAATTCATTCAAAGCTCTCCAACCTCCCTCATTCTCATTCTGGATCTACCTCCCAGAAAGGATCTGGTGCTCAATCCAGACTACCTTCAATTGTTCTATGAAGATACAGGATTAGACAAATACCGTAAAGCAATCGAAGAACTCCCTGAAGTACGACCATATGCCATGTCCTCTCTTTTCTTCCGCTCCTTAGTTTCCCCAACTTCCATAATTGTCCGTGTCGATACGGAATCGGGAGGACCCGAACGCATGGAGGAGATTATAGCAAACCATGTCGGTCCGGTTGCAAGAGATGTGATTCGGGTGTGGCTGGATGAATGTGCTTGCAAGGAGAGAGGGGTTGGAGAGATGGACAGAGGTAATATTGAGAAGAGGGATGAGTTGGTTAAGAAGAAAACCATTGATATAGACTTGGGTTCTAGTTTGCCAAGATTGTTTGGCCAGGAAATAGCAGATAGAGTAGTGGCAGCCATCCAACAAATCTTTGAAGCATGA

Coding sequence (CDS)

ATGCCAAACATGGCGTTGATGGTTTATCCATCTGCAAAAGCTTTCAGTCTTCCGCCGCCGGTGGAATCCCGTTTCAGAGAATTAGTGATAAGGAACGCAGCGTCGAACATGGCGGAGAATGTGCCGATCCGGCCGGGATCGTCGTCGAAGCTGAAGGAGTTTCCGCATCTGTCGGCTTCTCACAGAGCTCTGATGACTGATCTCGTCGGCGCTGCTGAATCTCGACTCGAAGATCATCTTCTTCCTTGCACTCTTCCTCCTGATGTTGAATACTTCCAGAATCAGAACGGGACTTCGCAAGGCGCTCTTCTCATCAGATCTGGCTCGCCGGACTCTTCTATTAATTTCATATTGGGAAGTTGGTTGCATAGCCAGCTACCAACAGGAGCATCATTAAACATAGCAAGCCTTTCTGCCTACTTGAGGCCATCAACTGATGCTCCAAACTTCCTCATAGAATTCATTCAAAGCTCTCCAACCTCCCTCATTCTCATTCTGGATCTACCTCCCAGAAAGGATCTGGTGCTCAATCCAGACTACCTTCAATTGTTCTATGAAGATACAGGATTAGACAAATACCGTAAAGCAATCGAAGAACTCCCTGAAGTACGACCATATGCCATGTCCTCTCTTTTCTTCCGCTCCTTAGTTTCCCCAACTTCCATAATTGTCCGTGTCGATACGGAATCGGGAGGACCCGAACGCATGGAGGAGATTATAGCAAACCATGTCGGTCCGGTTGCAAGAGATGTGATTCGGGTGTGGCTGGATGAATGTGCTTGCAAGGAGAGAGGGGTTGGAGAGATGGACAGAGGTAATATTGAGAAGAGGGATGAGTTGGTTAAGAAGAAAACCATTGATATAGACTTGGGTTCTAGTTTGCCAAGATTGTTTGGCCAGGAAATAGCAGATAGAGTAGTGGCAGCCATCCAACAAATCTTTGAAGCATGA

Protein sequence

MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSASHRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEIIANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRLFGQEIADRVVAAIQQIFEA
Homology
BLAST of Cp4.1LG05g11370 vs. ExPASy Swiss-Prot
Match: Q8LDU4 (Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RCCR PE=1 SV=2)

HSP 1 Score: 283.9 bits (725), Expect = 2.3e-75
Identity = 134/268 (50.00%), Postives = 193/268 (72.01%), Query Frame = 0

Query: 50  KLKEFPHLSASHRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGS 109
           K  EFP++S + + LM DL+   E+RL+  LLPC LPPDV  F N NG+++ +L IRSG 
Sbjct: 51  KFMEFPYVSPTRKQLMVDLMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGD 110

Query: 110 PDSSINFILGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLP 169
             S I+F++GSW+H ++PTG SLNI S+S +L  ST APNF++E IQSS  SL+LILDLP
Sbjct: 111 KSSPIDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLP 170

Query: 170 PRKDLVLNPDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTE 229
            RKDLVLNPDYL+ +Y+DT LD +R+++ +LPEV PY   SLF RS  SPT+ ++++D E
Sbjct: 171 HRKDLVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAE 230

Query: 230 SGGPERMEEIIANHVGPVARDVIRVWLDECACKERG---VGEMDRGNIEKRDELVKKKTI 289
               +++EEI+ +HV P A++V+ VWL+ C  +E     VGE +R  +E+RD+  ++K+I
Sbjct: 231 E--EDKLEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSI 290

Query: 290 DIDLGSSLPRLFGQEIADRVVAAIQQIF 315
           + DL    PR+FG+E++ RVV AI++ F
Sbjct: 291 EDDLDLQFPRMFGEEVSSRVVHAIKEAF 316

BLAST of Cp4.1LG05g11370 vs. ExPASy Swiss-Prot
Match: Q338P6 (Red chlorophyll catabolite reductase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RCCR1 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.8e-63
Identity = 120/260 (46.15%), Postives = 180/260 (69.23%), Query Frame = 0

Query: 57  LSASHRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQ--GALLIRSGSPDSSI 116
           +  +HR +   L   AE+RL   LLP  +PPDV  F++  G     G+L +R G+P S+I
Sbjct: 66  VEVAHREVARALASLAEARLGARLLPSAVPPDVAEFRSGGGAGNAVGSLDVRRGAPGSTI 125

Query: 117 NFILGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDL 176
           +F+L S LH ++P GA ++I SL  +L  STDAP+FL+EFIQ SPTS++++LDL PRKDL
Sbjct: 126 DFMLQSSLHCKVPNGA-IDITSLLIFLNASTDAPHFLMEFIQGSPTSIVVLLDLLPRKDL 185

Query: 177 VLNPDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPE 236
            L+P+Y++ +YE+T +DK R+ +EELP+ RPY   SLF RS  S T+I++ +D   GG  
Sbjct: 186 ALHPEYIERYYENTQVDKQREKVEELPQARPYRSRSLFVRSTFSLTAILMSIDCGQGGEG 245

Query: 237 RMEEIIANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSL 296
            +EEI+   +   AR ++++WLD CA     + E +R N+ KRD++V+ K+I++DL S+L
Sbjct: 246 TLEEIVRGQLATAARALLQIWLDSCADHTSEMEEGERENMIKRDQIVRSKSIEVDLTSNL 305

Query: 297 PRLFGQEIADRVVAAIQQIF 315
           PR+FG ++ADRV+A IQ+ F
Sbjct: 306 PRMFGPDVADRVIAEIQKAF 324

BLAST of Cp4.1LG05g11370 vs. ExPASy Swiss-Prot
Match: Q9MTQ6 (Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare OX=4513 GN=rccR PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.8e-49
Identity = 93/201 (46.27%), Postives = 142/201 (70.65%), Query Frame = 0

Query: 114 INFILGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKD 173
           I+F+L S LH ++P GA ++I SL   L  STDAP+F++EFIQ SPTS++++LDL PRKD
Sbjct: 1   IDFMLQSSLHCKVPNGA-IDITSLFINLNASTDAPHFIMEFIQGSPTSMVVLLDLLPRKD 60

Query: 174 LVLNPDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGP 233
           L L+P+Y++ +YEDT +DK RK IE+LP+ RPY   SLF RS  SPT++   +D   GG 
Sbjct: 61  LALHPEYIEKYYEDTEVDKQRKIIEQLPQARPYLSPSLFVRSAFSPTAVFFTIDCGKGGE 120

Query: 234 ERMEEIIANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSS 293
             +EEI+  H+  V + ++++WLD CA     + E +R  + KRD  V+ K+I++DL ++
Sbjct: 121 GTLEEIVHGHLASVVKGILQIWLDTCASDASEMEEGEREIMVKRDRTVRSKSIEVDLTAN 180

Query: 294 LPRLFGQEIADRVVAAIQQIF 315
           LPR+FG +++ R++A I++ F
Sbjct: 181 LPRMFGPDVSGRIIAEIRKAF 200

BLAST of Cp4.1LG05g11370 vs. NCBI nr
Match: XP_023534657.1 (red chlorophyll catabolite reductase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 624 bits (1608), Expect = 3.77e-225
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0

Query: 1   MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60
           MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS
Sbjct: 1   MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60

Query: 61  HRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS 120
           HRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS
Sbjct: 61  HRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS 120

Query: 121 WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY 180
           WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY
Sbjct: 121 WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY 180

Query: 181 LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240
           LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII
Sbjct: 181 LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240

Query: 241 ANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRLFGQ 300
           ANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRLFGQ
Sbjct: 241 ANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRLFGQ 300

Query: 301 EIADRVVAAIQQIFEA 316
           EIADRVVAAIQQIFEA
Sbjct: 301 EIADRVVAAIQQIFEA 316

BLAST of Cp4.1LG05g11370 vs. NCBI nr
Match: XP_023521266.1 (red chlorophyll catabolite reductase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 622 bits (1604), Expect = 1.54e-224
Identity = 315/316 (99.68%), Postives = 316/316 (100.00%), Query Frame = 0

Query: 1   MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60
           MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS
Sbjct: 1   MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60

Query: 61  HRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS 120
           HRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS
Sbjct: 61  HRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS 120

Query: 121 WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY 180
           WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY
Sbjct: 121 WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY 180

Query: 181 LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240
           LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII
Sbjct: 181 LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240

Query: 241 ANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRLFGQ 300
           ANHVGPVARDVIRVWLDECACKERGVGEM+RGNIEKRDELVKKKTIDIDLGSSLPRLFGQ
Sbjct: 241 ANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLPRLFGQ 300

Query: 301 EIADRVVAAIQQIFEA 316
           EIADRVVAAIQQIFEA
Sbjct: 301 EIADRVVAAIQQIFEA 316

BLAST of Cp4.1LG05g11370 vs. NCBI nr
Match: XP_022948072.1 (red chlorophyll catabolite reductase [Cucurbita moschata])

HSP 1 Score: 617 bits (1592), Expect = 1.04e-222
Identity = 313/316 (99.05%), Postives = 314/316 (99.37%), Query Frame = 0

Query: 1   MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60
           MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS
Sbjct: 1   MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60

Query: 61  HRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS 120
           HRALMTDLVGA ESRLED LLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS
Sbjct: 61  HRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS 120

Query: 121 WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY 180
           WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY
Sbjct: 121 WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY 180

Query: 181 LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240
           LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII
Sbjct: 181 LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240

Query: 241 ANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRLFGQ 300
           ANHVGPVARDVIRVWLDECACKERGVGEM+RGNIEKRDELVKKKTIDIDLGSSLPRLFGQ
Sbjct: 241 ANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLPRLFGQ 300

Query: 301 EIADRVVAAIQQIFEA 316
           EIADRVVAAIQQIFEA
Sbjct: 301 EIADRVVAAIQQIFEA 316

BLAST of Cp4.1LG05g11370 vs. NCBI nr
Match: KAG6605235.1 (Red chlorophyll catabolite reductase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 612 bits (1579), Expect = 9.94e-221
Identity = 310/316 (98.10%), Postives = 312/316 (98.73%), Query Frame = 0

Query: 1   MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60
           MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS
Sbjct: 1   MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60

Query: 61  HRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS 120
           HRALMTDLVGA ESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS
Sbjct: 61  HRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS 120

Query: 121 WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY 180
           WLHS+LPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN DY
Sbjct: 121 WLHSKLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNSDY 180

Query: 181 LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240
           LQLFYEDTGLDKYRKAIEELPEVRPY MSSLFFRSLVSPTSIIVRVDTESGGPERMEEII
Sbjct: 181 LQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240

Query: 241 ANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRLFGQ 300
            NHVGPVARDVIRVWLDECACKERGVGEM+RGNIEKRDELVKKKTIDIDLGSSLPRLFGQ
Sbjct: 241 ENHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLPRLFGQ 300

Query: 301 EIADRVVAAIQQIFEA 316
           EIADRVVAAIQQIFEA
Sbjct: 301 EIADRVVAAIQQIFEA 316

BLAST of Cp4.1LG05g11370 vs. NCBI nr
Match: XP_023007060.1 (red chlorophyll catabolite reductase-like [Cucurbita maxima])

HSP 1 Score: 603 bits (1556), Expect = 3.19e-217
Identity = 304/316 (96.20%), Postives = 309/316 (97.78%), Query Frame = 0

Query: 1   MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60
           MP MA MVYPSAKAF+LPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS
Sbjct: 1   MPKMAFMVYPSAKAFTLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60

Query: 61  HRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS 120
           HRALMTDLVGA ESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIR+GSPDSSINFILGS
Sbjct: 61  HRALMTDLVGAIESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRTGSPDSSINFILGS 120

Query: 121 WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY 180
           WL+SQLPTG SLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLV NPDY
Sbjct: 121 WLNSQLPTGTSLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVFNPDY 180

Query: 181 LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240
           LQLFYEDTGLDKYRKAIEELPEVRPY MSSLFFRSLVSPTSIIVRVDTESGGPERMEEII
Sbjct: 181 LQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240

Query: 241 ANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRLFGQ 300
           ANHVGPVARDVIRVWLDECACKERGVGEM+RGNIEKRDELV+KKTIDIDLGSSLPRLFGQ
Sbjct: 241 ANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVEKKTIDIDLGSSLPRLFGQ 300

Query: 301 EIADRVVAAIQQIFEA 316
           EIADRVVA IQQIFEA
Sbjct: 301 EIADRVVATIQQIFEA 316

BLAST of Cp4.1LG05g11370 vs. ExPASy TrEMBL
Match: A0A6J1G868 (red chlorophyll catabolite reductase OS=Cucurbita moschata OX=3662 GN=LOC111451765 PE=4 SV=1)

HSP 1 Score: 617 bits (1592), Expect = 5.02e-223
Identity = 313/316 (99.05%), Postives = 314/316 (99.37%), Query Frame = 0

Query: 1   MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60
           MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS
Sbjct: 1   MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60

Query: 61  HRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS 120
           HRALMTDLVGA ESRLED LLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS
Sbjct: 61  HRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS 120

Query: 121 WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY 180
           WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY
Sbjct: 121 WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY 180

Query: 181 LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240
           LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII
Sbjct: 181 LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240

Query: 241 ANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRLFGQ 300
           ANHVGPVARDVIRVWLDECACKERGVGEM+RGNIEKRDELVKKKTIDIDLGSSLPRLFGQ
Sbjct: 241 ANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVKKKTIDIDLGSSLPRLFGQ 300

Query: 301 EIADRVVAAIQQIFEA 316
           EIADRVVAAIQQIFEA
Sbjct: 301 EIADRVVAAIQQIFEA 316

BLAST of Cp4.1LG05g11370 vs. ExPASy TrEMBL
Match: A0A6J1L1Y1 (red chlorophyll catabolite reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111499663 PE=4 SV=1)

HSP 1 Score: 603 bits (1556), Expect = 1.54e-217
Identity = 304/316 (96.20%), Postives = 309/316 (97.78%), Query Frame = 0

Query: 1   MPNMALMVYPSAKAFSLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60
           MP MA MVYPSAKAF+LPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS
Sbjct: 1   MPKMAFMVYPSAKAFTLPPPVESRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHLSAS 60

Query: 61  HRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFILGS 120
           HRALMTDLVGA ESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIR+GSPDSSINFILGS
Sbjct: 61  HRALMTDLVGAIESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRTGSPDSSINFILGS 120

Query: 121 WLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDY 180
           WL+SQLPTG SLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLV NPDY
Sbjct: 121 WLNSQLPTGTSLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVFNPDY 180

Query: 181 LQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240
           LQLFYEDTGLDKYRKAIEELPEVRPY MSSLFFRSLVSPTSIIVRVDTESGGPERMEEII
Sbjct: 181 LQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVDTESGGPERMEEII 240

Query: 241 ANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRLFGQ 300
           ANHVGPVARDVIRVWLDECACKERGVGEM+RGNIEKRDELV+KKTIDIDLGSSLPRLFGQ
Sbjct: 241 ANHVGPVARDVIRVWLDECACKERGVGEMERGNIEKRDELVEKKTIDIDLGSSLPRLFGQ 300

Query: 301 EIADRVVAAIQQIFEA 316
           EIADRVVA IQQIFEA
Sbjct: 301 EIADRVVATIQQIFEA 316

BLAST of Cp4.1LG05g11370 vs. ExPASy TrEMBL
Match: D1MWY7 (Red chlorophyll catabolite reductase OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitRCCR PE=2 SV=1)

HSP 1 Score: 506 bits (1304), Expect = 3.43e-179
Identity = 261/319 (81.82%), Postives = 281/319 (88.09%), Query Frame = 0

Query: 4   MALMVYPSAKAFSLPPPVE------SRFRELVIRNAASNMAENVPIRPGSSSKLKEFPHL 63
           MA MVY SAK FSLPPPV       +R    VIR+AAS+MAE      GSSSKLKEFPHL
Sbjct: 1   MASMVYASAKPFSLPPPVPVQSCFTARKPATVIRSAASHMAE------GSSSKLKEFPHL 60

Query: 64  SASHRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFI 123
           S SHRALM DL+GA E RLED LLPC LPPDVEY++NQ+GTS+GALL+RSGSPDSSINFI
Sbjct: 61  SGSHRALMADLIGAIEDRLEDRLLPCALPPDVEYYRNQSGTSEGALLVRSGSPDSSINFI 120

Query: 124 LGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN 183
           L SWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD+PPRKD VLN
Sbjct: 121 LASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDMPPRKDPVLN 180

Query: 184 PDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERME 243
           PDYLQLFYEDT LD YRK IEELPE RPY MSSL+FRSLVSPTSII RVDTESGGPERME
Sbjct: 181 PDYLQLFYEDTRLDTYRKTIEELPETRPYVMSSLYFRSLVSPTSIISRVDTESGGPERME 240

Query: 244 EIIANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRL 303
           EII NH+GPVARDV++VWL+ECACKER VG ++R ++EKRDELVKKKTIDIDLGSSLPRL
Sbjct: 241 EIIKNHIGPVARDVLQVWLNECACKEREVGMVERVDLEKRDELVKKKTIDIDLGSSLPRL 300

Query: 304 FGQEIADRVVAAIQQIFEA 316
           FGQEIADRVVAAIQQ+FEA
Sbjct: 301 FGQEIADRVVAAIQQVFEA 313

BLAST of Cp4.1LG05g11370 vs. ExPASy TrEMBL
Match: A0A0A0LJH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285300 PE=4 SV=1)

HSP 1 Score: 500 bits (1288), Expect = 9.72e-177
Identity = 259/318 (81.45%), Postives = 277/318 (87.11%), Query Frame = 0

Query: 4   MALMVYPSAKAFSLPP--PVESRFREL----VIRNAASNMAENVPIRPGSSSKLKEFPHL 63
           MALMVY SAK FSLPP  P +S FR      VIR+ AS+MAE      GSSSKLK+FPHL
Sbjct: 1   MALMVYASAKPFSLPPLVPAQSSFRATKPARVIRSTASHMAE------GSSSKLKDFPHL 60

Query: 64  SASHRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFI 123
           S+S RALM DL+ A E R ED LLPCTLPPDVEY+QNQ+G S+GALLIRSGSPDSSINFI
Sbjct: 61  SSSQRALMGDLINAIEDRFEDRLLPCTLPPDVEYYQNQSGNSEGALLIRSGSPDSSINFI 120

Query: 124 LGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN 183
           L SWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN
Sbjct: 121 LASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN 180

Query: 184 PDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERME 243
           PDYLQ FYEDT LD YRK IEELPE RPY MSSLFFRSLVSPTSII RVDTESGGPERME
Sbjct: 181 PDYLQSFYEDTRLDTYRKTIEELPEARPYIMSSLFFRSLVSPTSIISRVDTESGGPERME 240

Query: 244 EIIANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRL 303
           EII NHVGP+ARD++RVW+DECACKER VG M+R  IEKRD L+KKKTIDIDLGSSLPRL
Sbjct: 241 EIIKNHVGPIARDMVRVWVDECACKEREVGMMERVEIEKRDGLIKKKTIDIDLGSSLPRL 300

Query: 304 FGQEIADRVVAAIQQIFE 315
           FGQE+ADRVVAAIQQ+F+
Sbjct: 301 FGQEVADRVVAAIQQVFD 312

BLAST of Cp4.1LG05g11370 vs. ExPASy TrEMBL
Match: A0A1S3C745 (red chlorophyll catabolite reductase-like OS=Cucumis melo OX=3656 GN=LOC103497431 PE=4 SV=1)

HSP 1 Score: 493 bits (1268), Expect = 1.08e-173
Identity = 256/318 (80.50%), Postives = 276/318 (86.79%), Query Frame = 0

Query: 4   MALMVYPSAKAFSLPPPV--ESRFREL----VIRNAASNMAENVPIRPGSSSKLKEFPHL 63
           MALMVY SAK FSLP  V  +S FR      V+R+ +S+MAE      GSSSKLKEFPHL
Sbjct: 1   MALMVYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAE------GSSSKLKEFPHL 60

Query: 64  SASHRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGSPDSSINFI 123
           S S RALM DL+ A E R ED LLPCTLPPDVEY+QNQ+GTS+GALLIRSGSPDSSINFI
Sbjct: 61  STSQRALMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFI 120

Query: 124 LGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLN 183
           L SWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKD VLN
Sbjct: 121 LASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLN 180

Query: 184 PDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTESGGPERME 243
           PDYLQ FYEDT LD YRK IEELPE RPY MSSLFFRSLVSPTSII R+DTESGGPERME
Sbjct: 181 PDYLQSFYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERME 240

Query: 244 EIIANHVGPVARDVIRVWLDECACKERGVGEMDRGNIEKRDELVKKKTIDIDLGSSLPRL 303
           EII NHVGP+ARDV+RVW+DECACKER VG M+R  +EKRD+LVKKKTIDIDLGSSLPRL
Sbjct: 241 EIIKNHVGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRL 300

Query: 304 FGQEIADRVVAAIQQIFE 315
           FGQE+ADRVVAAIQ++F+
Sbjct: 301 FGQEVADRVVAAIQRVFD 312

BLAST of Cp4.1LG05g11370 vs. TAIR 10
Match: AT4G37000.1 (accelerated cell death 2 (ACD2) )

HSP 1 Score: 283.9 bits (725), Expect = 1.6e-76
Identity = 134/268 (50.00%), Postives = 193/268 (72.01%), Query Frame = 0

Query: 50  KLKEFPHLSASHRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRSGS 109
           K  EFP++S + + LM DL+   E+RL+  LLPC LPPDV  F N NG+++ +L IRSG 
Sbjct: 51  KFMEFPYVSPTRKQLMVDLMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGD 110

Query: 110 PDSSINFILGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLP 169
             S I+F++GSW+H ++PTG SLNI S+S +L  ST APNF++E IQSS  SL+LILDLP
Sbjct: 111 KSSPIDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLP 170

Query: 170 PRKDLVLNPDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVDTE 229
            RKDLVLNPDYL+ +Y+DT LD +R+++ +LPEV PY   SLF RS  SPT+ ++++D E
Sbjct: 171 HRKDLVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAE 230

Query: 230 SGGPERMEEIIANHVGPVARDVIRVWLDECACKERG---VGEMDRGNIEKRDELVKKKTI 289
               +++EEI+ +HV P A++V+ VWL+ C  +E     VGE +R  +E+RD+  ++K+I
Sbjct: 231 E--EDKLEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSI 290

Query: 290 DIDLGSSLPRLFGQEIADRVVAAIQQIF 315
           + DL    PR+FG+E++ RVV AI++ F
Sbjct: 291 EDDLDLQFPRMFGEEVSSRVVHAIKEAF 316

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8LDU42.3e-7550.00Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q338P65.8e-6346.15Red chlorophyll catabolite reductase 1, chloroplastic OS=Oryza sativa subsp. jap... [more]
Q9MTQ62.8e-4946.27Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare OX=4513 GN=rc... [more]
Match NameE-valueIdentityDescription
XP_023534657.13.77e-225100.00red chlorophyll catabolite reductase-like [Cucurbita pepo subsp. pepo][more]
XP_023521266.11.54e-22499.68red chlorophyll catabolite reductase-like [Cucurbita pepo subsp. pepo][more]
XP_022948072.11.04e-22299.05red chlorophyll catabolite reductase [Cucurbita moschata][more]
KAG6605235.19.94e-22198.10Red chlorophyll catabolite reductase, chloroplastic, partial [Cucurbita argyrosp... [more]
XP_023007060.13.19e-21796.20red chlorophyll catabolite reductase-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1G8685.02e-22399.05red chlorophyll catabolite reductase OS=Cucurbita moschata OX=3662 GN=LOC1114517... [more]
A0A6J1L1Y11.54e-21796.20red chlorophyll catabolite reductase-like OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
D1MWY73.43e-17981.82Red chlorophyll catabolite reductase OS=Citrullus lanatus subsp. vulgaris OX=260... [more]
A0A0A0LJH49.72e-17781.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285300 PE=4 SV=1[more]
A0A1S3C7451.08e-17380.50red chlorophyll catabolite reductase-like OS=Cucumis melo OX=3656 GN=LOC10349743... [more]
Match NameE-valueIdentityDescription
AT4G37000.11.6e-7650.00accelerated cell death 2 (ACD2) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009439Red chlorophyll catabolite reductasePFAMPF06405RCC_reductasecoord: 61..311
e-value: 5.9E-114
score: 379.5
IPR009439Red chlorophyll catabolite reductasePANTHERPTHR34685RED CHLOROPHYLL CATABOLITE REDUCTASE, CHLOROPLASTICcoord: 19..315
NoneNo IPR availableGENE3D3.40.1500.20coord: 45..316
e-value: 1.7E-107
score: 360.6
NoneNo IPR availablePANTHERPTHR34685:SF2RED CHLOROPHYLL CATABOLITE REDUCTASE, CHLOROPLASTICcoord: 19..315

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g11370.1Cp4.1LG05g11370.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015996 chlorophyll catabolic process
cellular_component GO:0009507 chloroplast
molecular_function GO:0051743 red chlorophyll catabolite reductase activity