Cp4.1LG05g10970 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCATGCAAACGCCTCGTCCTCGTCCTCCTCGTCCTCCTCGTTCTTCTACGTTGCTTCTCGAACACAGCTATAGGTATCTTTCTCTATCTAATTAATTCATTACAATAAATTCAAGATCTGTTATTCTTTAAAACAAATCAAGGAGCACTCTTTTTAACACTAAAAATGTCACCATATTGGATTCTTTGTACAAAGTTCGAATCGGGTCGTTTTATTTTTCAATCGAATCGTTGATTTGTTGTTTGCAGAAGCAAGAAGTTTGGGAGTGGCTGAGGTTAAGAAGGATGATCATAGTCTCAAAGTTGATGATGAAGAACATTTTATGAGCACTGATGATTTGGTGGCTATGGATTATACTCAGGCTTCCAAGAAGCCTCCAATCCACAACTGA ATGGCTCCATGCAAACGCCTCGTCCTCGTCCTCCTCGTCCTCCTCGTTCTTCTACGTTGCTTCTCGAACACAGCTATAGAAGCAAGAAGTTTGGGAGTGGCTGAGGTTAAGAAGGATGATCATAGTCTCAAAGTTGATGATGAAGAACATTTTATGAGCACTGATGATTTGGTGGCTATGGATTATACTCAGGCTTCCAAGAAGCCTCCAATCCACAACTGA ATGGCTCCATGCAAACGCCTCGTCCTCGTCCTCCTCGTCCTCCTCGTTCTTCTACGTTGCTTCTCGAACACAGCTATAGAAGCAAGAAGTTTGGGAGTGGCTGAGGTTAAGAAGGATGATCATAGTCTCAAAGTTGATGATGAAGAACATTTTATGAGCACTGATGATTTGGTGGCTATGGATTATACTCAGGCTTCCAAGAAGCCTCCAATCCACAACTGA MAPCKRLVLVLLVLLVLLRCFSNTAIEARSLGVAEVKKDDHSLKVDDEEHFMSTDDLVAMDYTQASKKPPIHN Homology
BLAST of Cp4.1LG05g10970 vs. NCBI nr
Match: KAG6605281.1 (hypothetical protein SDJN03_02598, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 121 bits (304), Expect = 3.51e-34 Identity = 69/81 (85.19%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of Cp4.1LG05g10970 vs. NCBI nr
Match: KAA0045905.1 (Root meristem growth factor 9 -like protein [Cucumis melo var. makuwa] >TYK13684.1 hypothetical protein E5676_scaffold299G002040 [Cucumis melo var. makuwa]) HSP 1 Score: 84.0 bits (206), Expect = 3.90e-19 Identity = 49/88 (55.68%), Postives = 61/88 (69.32%), Query Frame = 0
BLAST of Cp4.1LG05g10970 vs. NCBI nr
Match: KGN62102.1 (hypothetical protein Csa_006036 [Cucumis sativus]) HSP 1 Score: 83.2 bits (204), Expect = 7.45e-19 Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of Cp4.1LG05g10970 vs. NCBI nr
Match: KAG6571377.1 (hypothetical protein SDJN03_30292, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 82.0 bits (201), Expect = 1.55e-18 Identity = 50/79 (63.29%), Postives = 56/79 (70.89%), Query Frame = 0
BLAST of Cp4.1LG05g10970 vs. NCBI nr
Match: KAB2597277.1 (hypothetical protein D8674_000197 [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 54.7 bits (130), Expect = 9.27e-08 Identity = 34/74 (45.95%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of Cp4.1LG05g10970 vs. ExPASy TrEMBL
Match: A0A5A7TWX6 (Root meristem growth factor 9-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002040 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.89e-19 Identity = 49/88 (55.68%), Postives = 61/88 (69.32%), Query Frame = 0
BLAST of Cp4.1LG05g10970 vs. ExPASy TrEMBL
Match: A0A0A0LMV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297260 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.61e-19 Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of Cp4.1LG05g10970 vs. ExPASy TrEMBL
Match: A0A5N5F2S8 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_000197 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 4.49e-08 Identity = 34/74 (45.95%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of Cp4.1LG05g10970 vs. ExPASy TrEMBL
Match: A0A314YKW1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_08970 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.62e-07 Identity = 39/84 (46.43%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of Cp4.1LG05g10970 vs. ExPASy TrEMBL
Match: A0A2P5BTZ6 (Root meristem growth factor OS=Trema orientale OX=63057 GN=TorRG33x02_308880 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 1.81e-07 Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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