Cp4.1LG05g10340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g10340
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DEAD-box ATP-dependent RNA helicase 36
Location	Cp4.1LG05: 6800598 .. 6804067 (+)
RNA-Seq Expression	Cp4.1LG05g10340
Synteny	Cp4.1LG05g10340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACCTTGGAACGACTTTGTGGCGAGAGCGATAGACTGCGCCCTAGTTCAACAATTGGCCGTGAAGCAATCAAATTCTTGCTGCGATTGTTCAAACCTGGAAACCCTTTGAATTGTTGTTCATCATCTCTGATTTCATGGATCAAGAAGTAACAGTCGACGAGAATTTCCCACTTTTTTCAAAATCCCATCGGAAAACCCATAAACCTTCACAAAAAAACCCCACCGCCGCCGTCGATAATACCGCCGAGAAGGCGCCTATTCAGGTTGAGAAATCCACAGAACTCACCACTAAATCCACGAACGTTACATTTGCCGACCTCGGCTTATCGGAATGGATCGTCCAGACCTGCAAGGAATTGGCTATGAAGAAGCCAACGGCGGTTCAAACCCACTGCATCCCGAAGATTCTGGCTGGCCTCGACGTACTAGGTCTTGCTCAAACTGGAAGCGGGAAGACTGCGGCGTTTGCCTTGCCGATTCTTCAACAGCTTTCGGAAACACCTTTCGGCGTCTTCGCGTTGGTCGTCACTCCCACTAGGGAATTGGCTTATCAATTGGCCGAGCAGTTTAGGGCACTCGGTTCCTCCTTGAATTTGCGGTGCTCTGTGGTTGTCGGAGGCATGGATATGTTGAACCAGACGCAGAGTTTGCTGAAGAGACCTCACATTGTAATTGCAACGCCGGGGAGGGTTAAGGTATTGCTGGAGGAGAATCCTGATATCCCTGCCGTCTTCTCCAAGACTAAGGTTCGTTGCTTGTCTTGTTCTTATTGTTCATGTTCTCATAGCTTTCAAGAACATGAAATTCTCAGGCAAATATATACCAATCTGGCTGTGTTCTTGATATCTTATTGATCTTTTTATACACCAGTTCCTAGTTTTGGATGAAGCTGATAGAGTATTGGATGTTGGATTTGAAGAGGAATTGAAAGTTATCTTCAAATGCTTGCCACGAAATCGTCAAACTCTATTGTTCTCTGCAACAATGACAAAAGATCTTGAAACACTCCTTGAGCTTTCTGCAAACAAAGCATACTTTTATGAGGCATATGAAGGGTTCAAGACAGTTGATATGCTTAAGCAGCAATATGTATTCATACCGAAGAATGTGAAGGATGTGTATCTACTCCACATTATGTCTAAAATGAAAGACATGGGTATTCGATCAGCTATCATATTTGTGCACACTTGCAAGTATGTTTTTTGGGTTTTCACCTCTCATTGTTCCTTGTCTCTCTCATTGCTTACTCTTTTCTTAAACTATATGCAGAAGCTGTCACCATTTAGGTTTGTTACTTGAAGAACTTGATCAAGATGTGGCGGCGTTGCATTCATTCAAGTCACAGTCTGAGAGGCTTTCTGCGCTTTATCGATTCAAATCGGGACAAGCTCCTGTTTTGCTTGCAACCGATGTAGCTAGTCGGGGTTTGGACATTCCAACGGTTGATCTTGTTATAAATTACGATATTCCAAGGTGGTAATTGATTTCGTGTGGTTAAGTAGAAATGTTTCAAGAATGCTGGTGATGTTAATATAACAACATTTTGACTCAGGTTTCCAAGAGATTATGTTCACCGAGTGGGACGTACTGCAAGAGCAGGTCGACATGGATTGGCTGTGAGCTTTATTACCCAGGTGAGTGTTAAGTGATTGATAACTTTTTAACTCGATTTGTTTCTTGGACGCGAACTCCGCATCGAATGTTCAGGAATTTCTCTATAGACTTGTTTTTTTGATATATGGAGTGAATAGTAAGTTTGCTTAAGCTTGTATTATATACATTAACATAGTAGTTGTCCTTGCTATTGCTTCTATAATTCAACCTTCTCCAATTCACAAGGGCTATTCTTTATAGAAAGTTGTGATGGTAAAGCGGATTCGTAACTACAATTTCATAATCTCGATGGTATATACATGTAGGAAAGTAGTATATTGCTAATGTTTTTGTTTTCGTCGCTCCAAGCAAGTGTTTTTTTCGTTGGATTTTCTTGTTTTTCTTACCTTCGATGAATGTCGATCTCGTATACAGAATGATGTGGAGCTTATTCATGAAATAGAGGCCAATCTAGGAAAGAAATTGGAGATTTTCGAATGCAAGGAGAATGAGGTGCTTGAGAATGTTACAAAGGTATGCTTTGGCCTTTTCCCCCCTAATATGATTGATTTTTTCAGTGTATTATATGCTGTTTGCCAATTGAACTTCACAACTCATCTCATCTGAGTGGTTAACTTCTGAATGCGGACGTTTTCCTTTAAAAAGTGGAAATAAAACATGTAGACTTCACAAGTCGAGTTCATGCTACTGAGGAAAAACGAGATTCCTGCACTCTAATTAGTACATCATGGAGCTTCCTAGTGAATTGCTTTGTTATAGTCACTCTGTGTATGAAAACACATGTTCTTGGGGGAATCACTCTAGAGGTATTGTAACGGCCCAAGCCCACCGCTAGCAATTATTGTCCTCTTTGGGCTGTCTCTGTCGGACTTCTCCTCAAAGTTTTTAAAACGCGTCTATTAGGGAGAGATTTCCACACCTTTATAAAGAATGTTTCGTTCTCCCTTCTAACCGATGTGGGATCTCACAGGCATAGTATAGTTTTTGTAGTGTTATGACCTATAGGAACAATTATTTGCTGTAAAAAGCTCAGCCTAGATACTTGTTTCCGTCTAGAGCCTATGAATTTTCTCATCTCTTTAGTTGTATCAGTCATTTTTCAGCTCAAATGCCAGTAAATCTATACCAAACAGTAGAGATACCGCCATGTCGGTACGATGGGACACTGTTTCAGTAGCTCATAGGCTCTAAAATTACACAAACTTCTCAACATTGAGGGAGTTTAGCATTTCTTGTCTGGCATACCAGAAGTGAATTTGAGGGAGTTGAACTCATGTTTGCAACGTTTGTACACAGGTATACAAGGCAAGACGTGTGGCAGCAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGTGAAAGAACGAAAGAAACAGAAATTTAAAACATTGGCAGAGAAAGGATTGTTAAAGAAAAGGAGCAGAAAGAGAAGAAGAGAGAAAGCTTCCAAGGAGTTGGGAGCTGTATGAGAATCTGTACCACATCAAAATTTTGATATTTCACTAACTTAATACATCTGTGATTATTATTATTGCCTAGTGGCTTCATTTCTTTTGGGTCTTTAGCAGATTTTTTTTTATATATAACCTAGTTCATGTTTGTTTCTTTTTTCTCTTTTAGAAGGTGAGCATATTTCTAGTGTAATACCGAATATTGTCTTGGTCGAAATGGTTTTACTAATGTCACAACGACCAATTCAATTGATCGAAGCTCGTTTGCTATATTATTATGTATTTAAATGCTATCTTAGCCTTTTATACTTTTTCAACTTTTGGTCAATTAGATCCTTGTACTTTTAAATATGTTCATTTTTATACAAATTGGTGACGTTTTAATAAAATGTAATGGCTAT

mRNA sequence

CGAACCTTGGAACGACTTTGTGGCGAGAGCGATAGACTGCGCCCTAGTTCAACAATTGGCCGTGAAGCAATCAAATTCTTGCTGCGATTGTTCAAACCTGGAAACCCTTTGAATTGTTGTTCATCATCTCTGATTTCATGGATCAAGAAGTAACAGTCGACGAGAATTTCCCACTTTTTTCAAAATCCCATCGGAAAACCCATAAACCTTCACAAAAAAACCCCACCGCCGCCGTCGATAATACCGCCGAGAAGGCGCCTATTCAGGTTGAGAAATCCACAGAACTCACCACTAAATCCACGAACGTTACATTTGCCGACCTCGGCTTATCGGAATGGATCGTCCAGACCTGCAAGGAATTGGCTATGAAGAAGCCAACGGCGGTTCAAACCCACTGCATCCCGAAGATTCTGGCTGGCCTCGACGTACTAGGTCTTGCTCAAACTGGAAGCGGGAAGACTGCGGCGTTTGCCTTGCCGATTCTTCAACAGCTTTCGGAAACACCTTTCGGCGTCTTCGCGTTGGTCGTCACTCCCACTAGGGAATTGGCTTATCAATTGGCCGAGCAGTTTAGGGCACTCGGTTCCTCCTTGAATTTGCGGTGCTCTGTGGTTGTCGGAGGCATGGATATGTTGAACCAGACGCAGAGTTTGCTGAAGAGACCTCACATTGTAATTGCAACGCCGGGGAGGGTTAAGGTATTGCTGGAGGAGAATCCTGATATCCCTGCCGTCTTCTCCAAGACTAAGTTCCTAGTTTTGGATGAAGCTGATAGAGTATTGGATGTTGGATTTGAAGAGGAATTGAAAGTTATCTTCAAATGCTTGCCACGAAATCGTCAAACTCTATTGTTCTCTGCAACAATGACAAAAGATCTTGAAACACTCCTTGAGCTTTCTGCAAACAAAGCATACTTTTATGAGGCATATGAAGGGTTCAAGACAGTTGATATGCTTAAGCAGCAATATGTATTCATACCGAAGAATGTGAAGGATGTGTATCTACTCCACATTATGTCTAAAATGAAAGACATGGGTATTCGATCAGCTATCATATTTGTGCACACTTGCAAAAGCTGTCACCATTTAGGTTTGTTACTTGAAGAACTTGATCAAGATGTGGCGGCGTTGCATTCATTCAAGTCACAGTCTGAGAGGCTTTCTGCGCTTTATCGATTCAAATCGGGACAAGCTCCTGTTTTGCTTGCAACCGATGTAGCTAGTCGGGGTTTGGACATTCCAACGGTTGATCTTGTTATAAATTACGATATTCCAAGGTGGTTTCCAAGAGATTATGTTCACCGAGTGGGACGTACTGCAAGAGCAGGTCGACATGGATTGGCTGTGAGCTTTATTACCCAGAATGATGTGGAGCTTATTCATGAAATAGAGGCCAATCTAGGAAAGAAATTGGAGATTTTCGAATGCAAGGAGAATGAGGTGCTTGAGAATGTTACAAAGGTATACAAGGCAAGACGTGTGGCAGCAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGTGAAAGAACGAAAGAAACAGAAATTTAAAACATTGGCAGAGAAAGGATTGTTAAAGAAAAGGAGCAGAAAGAGAAGAAGAGAGAAAGCTTCCAAGGAGTTGGGAGCTGTATGAGAATCTGTACCACATCAAAATTTTGATATTTCACTAACTTAATACATCTGTGATTATTATTATTGCCTAGTGGCTTCATTTCTTTTGGGTCTTTAGCAGATTTTTTTTTATATATAACCTAGTTCATGTTTGTTTCTTTTTTCTCTTTTAGAAGGTGAGCATATTTCTAGTGTAATACCGAATATTGTCTTGGTCGAAATGGTTTTACTAATGTCACAACGACCAATTCAATTGATCGAAGCTCGTTTGCTATATTATTATGTATTTAAATGCTATCTTAGCCTTTTATACTTTTTCAACTTTTGGTCAATTAGATCCTTGTACTTTTAAATATGTTCATTTTTATACAAATTGGTGACGTTTTAATAAAATGTAATGGCTAT

Coding sequence (CDS)

ATGGATCAAGAAGTAACAGTCGACGAGAATTTCCCACTTTTTTCAAAATCCCATCGGAAAACCCATAAACCTTCACAAAAAAACCCCACCGCCGCCGTCGATAATACCGCCGAGAAGGCGCCTATTCAGGTTGAGAAATCCACAGAACTCACCACTAAATCCACGAACGTTACATTTGCCGACCTCGGCTTATCGGAATGGATCGTCCAGACCTGCAAGGAATTGGCTATGAAGAAGCCAACGGCGGTTCAAACCCACTGCATCCCGAAGATTCTGGCTGGCCTCGACGTACTAGGTCTTGCTCAAACTGGAAGCGGGAAGACTGCGGCGTTTGCCTTGCCGATTCTTCAACAGCTTTCGGAAACACCTTTCGGCGTCTTCGCGTTGGTCGTCACTCCCACTAGGGAATTGGCTTATCAATTGGCCGAGCAGTTTAGGGCACTCGGTTCCTCCTTGAATTTGCGGTGCTCTGTGGTTGTCGGAGGCATGGATATGTTGAACCAGACGCAGAGTTTGCTGAAGAGACCTCACATTGTAATTGCAACGCCGGGGAGGGTTAAGGTATTGCTGGAGGAGAATCCTGATATCCCTGCCGTCTTCTCCAAGACTAAGTTCCTAGTTTTGGATGAAGCTGATAGAGTATTGGATGTTGGATTTGAAGAGGAATTGAAAGTTATCTTCAAATGCTTGCCACGAAATCGTCAAACTCTATTGTTCTCTGCAACAATGACAAAAGATCTTGAAACACTCCTTGAGCTTTCTGCAAACAAAGCATACTTTTATGAGGCATATGAAGGGTTCAAGACAGTTGATATGCTTAAGCAGCAATATGTATTCATACCGAAGAATGTGAAGGATGTGTATCTACTCCACATTATGTCTAAAATGAAAGACATGGGTATTCGATCAGCTATCATATTTGTGCACACTTGCAAAAGCTGTCACCATTTAGGTTTGTTACTTGAAGAACTTGATCAAGATGTGGCGGCGTTGCATTCATTCAAGTCACAGTCTGAGAGGCTTTCTGCGCTTTATCGATTCAAATCGGGACAAGCTCCTGTTTTGCTTGCAACCGATGTAGCTAGTCGGGGTTTGGACATTCCAACGGTTGATCTTGTTATAAATTACGATATTCCAAGGTGGTTTCCAAGAGATTATGTTCACCGAGTGGGACGTACTGCAAGAGCAGGTCGACATGGATTGGCTGTGAGCTTTATTACCCAGAATGATGTGGAGCTTATTCATGAAATAGAGGCCAATCTAGGAAAGAAATTGGAGATTTTCGAATGCAAGGAGAATGAGGTGCTTGAGAATGTTACAAAGGTATACAAGGCAAGACGTGTGGCAGCAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGTGAAAGAACGAAAGAAACAGAAATTTAAAACATTGGCAGAGAAAGGATTGTTAAAGAAAAGGAGCAGAAAGAGAAGAAGAGAGAAAGCTTCCAAGGAGTTGGGAGCTGTATGA

Protein sequence

MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAVDNTAEKAPIQVEKSTELTTKSTNVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLKKRSRKRRREKASKELGAV

Homology

[Close]

BLAST of Cp4.1LG05g10340 vs. ExPASy Swiss-Prot
Match: Q9SA27 (DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 PE=2 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 3.7e-173
Identity = 323/473 (68.29%), Postives = 388/473 (82.03%), Query Frame = 0


Query: 25  SQKNPTAAVDNTAEKAPI-----QVEKSTEL-----TTKSTNVTFADLGLSEWIVQTCKE 84
           S+KNP   V+  ++K        Q EK T       TT +TN  F  LGL+EW V+TCKE
Sbjct: 18  SRKNPKTVVNIQSQKLDSDQNTPQFEKFTNPNPSSDTTSATN--FEGLGLAEWAVETCKE 77

Query: 85  LAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLSETPFGVFALVVTPT 144
           L M+KPT VQTHC+PKILAG DVLGLAQTGSGKTAAFALPIL +L+E P+GVFALVVTPT
Sbjct: 78  LGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPT 137

Query: 145 RELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLLEENP 204
           RELA+QLAEQF+ALGS LNLRCSV+VGGMDML QT SL+ RPHIVI TPGR+KVLLE NP
Sbjct: 138 RELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNP 197

Query: 205 DIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFSATMTKDLETLLELS 264
           D+P VFS+TKFLVLDEADRVLDVGF++EL+ IF+CLP++RQTLLFSATMT +L+ LLE S
Sbjct: 198 DVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHS 257

Query: 265 ANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMGIRSAIIFVHTCKSC 324
           +NKAYFYEAYEG KTVD L QQ++F  K+ K++YL+HI+S+M+D GIRSA+IFV TC++C
Sbjct: 258 SNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTC 317

Query: 325 HHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVLLATDVASRGLDIPTVDLVI 384
             L L+L+EL+ +  A+HS  SQS RLSAL +FKSG+ P+LLATDVASRGLDIPTVDLVI
Sbjct: 318 QRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVI 377

Query: 385 NYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEANLGKKLEIFECKENE 444
           NYDIPR  PRDYVHRVGRTARAGR GLAVS IT+ DV+LIH+IE  +GKK+E +  K   
Sbjct: 378 NYDIPR-DPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVIT 437

Query: 445 VLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLKKRSRKRR 488
               VTKV KA+RVA MKM+D+GFE+KVK+R+K K KTLA+KGLLKKR ++++
Sbjct: 438 DSLEVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTLADKGLLKKRGKRQK 487

[Close]

BLAST of Cp4.1LG05g10340 vs. ExPASy Swiss-Prot
Match: Q8L4E9 (DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0633500 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 6.8e-143
Identity = 264/479 (55.11%), Postives = 350/479 (73.07%), Query Frame = 0


Query: 18  HRKTHKPSQKNPTAAVD------NTAEKAPIQVEKSTELTTKSTNVTFADLGLSEWIVQT 77
           H +  +P   +P+ A++      + A  A +      +    +   TFA+LGLS+W+V  
Sbjct: 32  HTQPEEPPNPSPSPAIEPDLRDSDEAPAAAVTEHAGDDAAAAAVPSTFAELGLSQWLVDV 91

Query: 78  CKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLSETPFGVFALVV 137
           C  L M+ PTAVQ  CIP+ L G DVLG+A+TGSGKTAAFALPIL +L E P+GV AL +
Sbjct: 92  CDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALAL 151

Query: 138 TPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLLE 197
            PTRELA QLAEQFRALG+ L LRC   +GG D L Q + L +RPH+V+ATPGR+  L+ 
Sbjct: 152 APTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLARRPHVVVATPGRIATLIN 211

Query: 198 ENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFSATMTKDLETLL 257
           ++PD+  VF++TKFLVLDEADRVLD+ FEE+L+VIF  LP+ RQT LFSAT++ +L +LL
Sbjct: 212 DDPDLAKVFARTKFLVLDEADRVLDINFEEDLRVIFGSLPKKRQTFLFSATISDNLRSLL 271

Query: 258 ELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMGIRSAIIFVHTC 317
           ELS N +YF+EAYEGFKTVD LKQ Y+ +P + K++YL +++SKM +  IRS I+FV TC
Sbjct: 272 ELSGNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKELYLFYLLSKMNEDNIRSVIVFVSTC 331

Query: 318 KSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVLLATDVASRGLDIPTVD 377
           ++C +L  LLEEL     +LHS K QS RL+AL+ FKS + PVLLATDVASRGLDI TVD
Sbjct: 332 RTCQYLDFLLEELGHPAVSLHSHKPQSRRLAALHNFKSSKVPVLLATDVASRGLDIQTVD 391

Query: 378 LVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFI-TQNDVELIHEIEANLGKKLEIFEC 437
           LVINYD+PR +PRDY+HRVGRTARA R GL++SFI TQ D+ L+HEIE  +GK+L  ++ 
Sbjct: 392 LVINYDVPR-YPRDYIHRVGRTARATRGGLSISFITTQRDIRLLHEIEDVVGKQLGAYDG 451

Query: 438 KENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLKKRSRKRRRE 490
           +  +V ++ TKV+KARR+A MKM D+G E+KV+ RK+Q           KKR+++R+R+
Sbjct: 452 EMRDVNKDATKVFKARRLANMKMADEGHEDKVQARKEQ-----------KKRAQERKRK 498

[Close]

BLAST of Cp4.1LG05g10340 vs. ExPASy Swiss-Prot
Match: Q9Y6V7 (Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 2.3e-106
Identity = 218/452 (48.23%), Postives = 299/452 (66.15%), Query Frame = 0


Query: 59  FADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQ 118
           FA+LGLS W+V+ C++L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 119 LSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHI 178
           LSE P+G+F LV+TPTRELAYQ+AEQFR LG  L L+  ++VGGMDM+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 179 VIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVG---FEEELKVIFKCLPRNRQ 238
           VIATPGR+   L  +        K +FLV+DEADR+L+ G   F  +L+ I   +P  RQ
Sbjct: 124 VIATPGRLADHLRSSNTFS--IKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQ 183

Query: 239 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 298
           TLLFSAT+T  L  L  L+ N+ +F+EA     TV+ L Q+Y+ +P+ VKD YL+H++ +
Sbjct: 184 TLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQR 243

Query: 299 MKDMGIR-SAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPV 358
            +D     S IIF +TCK+C  L ++L +      ALHS   Q ER +AL +FKS    +
Sbjct: 244 FQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRI 303

Query: 359 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 418
           L+ATDVASRGLDIPTV +VIN++ P   P+ Y+HRVGRTARAGR G A++ +TQ D+ L+
Sbjct: 304 LIATDVASRGLDIPTVQVVINHNTP-GLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLV 363

Query: 419 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKF---- 478
           H IE  + KKLE F  +E EVL+ +T+V   RR   +K+    F+EK +  K+++     
Sbjct: 364 HAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLILEG 423

Query: 479 -------KTLAEKGLLKKRSRKRRREKASKEL 496
                  K  AE   +K+++R R +EK  + L
Sbjct: 424 KDPDLEAKRKAELAKIKQKNR-RFKEKVEETL 451

[Close]

BLAST of Cp4.1LG05g10340 vs. ExPASy Swiss-Prot
Match: Q4FZF3 (Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 6.2e-104
Identity = 213/452 (47.12%), Postives = 300/452 (66.37%), Query Frame = 0


Query: 59  FADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQ 118
           FA++GLS W+V+ C++L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 119 LSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHI 178
           LSE P+G+F LV+TPTRELAYQ+AEQFR LG  L L+  ++VGGMDM+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 179 VIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVG---FEEELKVIFKCLPRNRQ 238
           VIATPGR+   L  +        K +FLV+DEADR+L+ G   F  +L+ I   +P  RQ
Sbjct: 124 VIATPGRLADHLRSSNTFN--MKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPARRQ 183

Query: 239 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 298
           TLLFSAT+T  L+ L  L+ N+ +F+EA    +TV+ L Q+Y+ +P+ VKD YL+H++  
Sbjct: 184 TLLFSATLTDTLKELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQT 243

Query: 299 MKD-MGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPV 358
            +D +   S IIF +TCK+C  L ++L + +    ALHS   Q ER +AL +FKS    +
Sbjct: 244 FQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRI 303

Query: 359 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 418
           L+ATDVASRGLDIPTV +VIN++ P   P+ Y+HRVGRTARAGR G A++ +TQ D+ L+
Sbjct: 304 LIATDVASRGLDIPTVQVVINHNTP-GLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLL 363

Query: 419 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKF---- 478
           H IE  + ++L     +E EVL+ +T+V   RR   +K+    F+EK +  K+++     
Sbjct: 364 HAIEEQIKQQLAELVVEEAEVLQILTQVNVVRRECEIKLEASHFDEKKEINKRKQMILEG 423

Query: 479 -------KTLAEKGLLKKRSRKRRREKASKEL 496
                  K  AE   +K+++R R +EK  + L
Sbjct: 424 KDPDLEAKRKAELAKIKQQNR-RFKEKVGQTL 451

[Close]

BLAST of Cp4.1LG05g10340 vs. ExPASy Swiss-Prot
Match: Q55BR9 (Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 GN=ddx49 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.7e-101
Identity = 202/414 (48.79%), Postives = 281/414 (67.87%), Query Frame = 0


Query: 58  TFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQ 117
           TF +LGL+ W+V  CK+L  K P+ +Q + IP+IL G D++  A+TGSGKTA+FA+PIL 
Sbjct: 5   TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64

Query: 118 QLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPH 177
           QLSE P+GVFA+++TPTRELA Q+ EQF A+G+ +N+ CSVV+GG+D + Q   L KRPH
Sbjct: 65  QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPH 124

Query: 178 IVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCL--PRNRQ 237
           I++ATPGR+   L     I   F   KFLVLDEADR+L   FE E+  I + L  P  RQ
Sbjct: 125 IIVATPGRLASHLNNGLKIALKF--CKFLVLDEADRLLGEDFELEIASILEHLPPPEKRQ 184

Query: 238 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 297
           TLLFSATMTK+L  L  ++ NK + +E    + TVD LKQ+Y+++P   KD YL++I+ K
Sbjct: 185 TLLFSATMTKNLTKLDSIALNKPFIFEDNSKYDTVDTLKQEYIYMPAPTKDCYLVYILKK 244

Query: 298 MKDMGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVL 357
            +     SAI+FV+ C +   +  +L +LD    +LHSF  Q  RL+AL  FKSG+  VL
Sbjct: 245 HEG---SSAIVFVNNCYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKVKVL 304

Query: 358 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 417
           +ATDVASRGLDIP V +VINY +     +DY+HRVGRTAR GR G A+SFIT +DV LI 
Sbjct: 305 VATDVASRGLDIPDVQIVINYKLSN-SSKDYIHRVGRTARFGRSGRAISFITPHDVSLIK 364

Query: 418 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQK 470
            IE  + K+LE+++  ++EV  ++ +   AR++  + + +  F  K KER+ ++
Sbjct: 365 GIEEIIKKQLELYKTDDDEVFRHLKEASTARKIVEIHLDEIEFGVKQKERRTER 412

[Close]

BLAST of Cp4.1LG05g10340 vs. NCBI nr
Match: XP_023534745.1 (DEAD-box ATP-dependent RNA helicase 36 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 949 bits (2453), Expect = 0.0
Identity = 497/498 (99.80%), Postives = 497/498 (99.80%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAVDNTAEKAPIQVEKSTELTTKSTNVTFA 60
           MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAVDNTAEKAPIQVEKSTELTTKSTNVTFA
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAVDNTAEKAPIQVEKSTELTTKSTNVTFA 60

Query: 61  DLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLS 120
           DLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLS
Sbjct: 61  DLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLS 120

Query: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180
           ETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVI
Sbjct: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180

Query: 181 ATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFS 240
           ATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFS
Sbjct: 181 ATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFS 240

Query: 241 ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMG 300
           ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMG
Sbjct: 241 ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMG 300

Query: 301 IRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVLLATDV 360
           IRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVLLATDV
Sbjct: 301 IRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVLLATDV 360

Query: 361 ASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEAN 420
           ASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEAN
Sbjct: 361 ASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEAN 420

Query: 421 LGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLK 480
           LGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLK
Sbjct: 421 LGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLK 480

Query: 481 KRSRKRRREKASKELGAV 498
           KRSRKRRREKASKELGAV
Sbjct: 481 KRSRKRRREKASKELGAV 497

[Close]

BLAST of Cp4.1LG05g10340 vs. NCBI nr
Match: KAG6605347.1 (DEAD-box ATP-dependent RNA helicase 36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035305.1 DEAD-box ATP-dependent RNA helicase 36 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 941 bits (2432), Expect = 0.0
Identity = 494/503 (98.21%), Postives = 497/503 (98.81%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAA-----VDNTAEKAPIQVEKSTELTTKST 60
           MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAA     VDNTAEKAPIQ+EKSTELTTKST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSTSVDNTAEKAPIQIEKSTELTTKST 60

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
           NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR
Sbjct: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300

Query: 301 MKDMGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVL 360
           MKDMG+RSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERL+ALYRFKSGQAPVL
Sbjct: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLAALYRFKSGQAPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAE 480
           EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAE
Sbjct: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAE 480

Query: 481 KGLLKKRSRKRRREKASKELGAV 498
           KGLLKKRSRKRRREKASKELGAV
Sbjct: 481 KGLLKKRSRKRRREKASKELGAV 502

[Close]

BLAST of Cp4.1LG05g10340 vs. NCBI nr
Match: XP_022947338.1 (DEAD-box ATP-dependent RNA helicase 36 [Cucurbita moschata] >XP_022947339.1 DEAD-box ATP-dependent RNA helicase 36 [Cucurbita moschata])

HSP 1 Score: 934 bits (2415), Expect = 0.0
Identity = 491/503 (97.61%), Postives = 494/503 (98.21%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAA-----VDNTAEKAPIQVEKSTELTTKST 60
           MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAA     VDNTAEKAPIQ+EKSTELTTKST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
           NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR
Sbjct: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300

Query: 301 MKDMGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVL 360
           MKDMG+RSAIIFVHTCKSCHHLGLLL ELDQDV ALHSFKSQSERL+ALYRFKSGQAPVL
Sbjct: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAE 480
           EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFK LAE
Sbjct: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480

Query: 481 KGLLKKRSRKRRREKASKELGAV 498
           KGLLKKRSRKRRREKASKELGAV
Sbjct: 481 KGLLKKRSRKRRREKASKELGAV 502

[Close]

BLAST of Cp4.1LG05g10340 vs. NCBI nr
Match: XP_023007160.1 (DEAD-box ATP-dependent RNA helicase 36 [Cucurbita maxima])

HSP 1 Score: 934 bits (2415), Expect = 0.0
Identity = 488/498 (97.99%), Postives = 494/498 (99.20%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAVDNTAEKAPIQVEKSTELTTKSTNVTFA 60
           MDQEVTVDENFPLFSKSHRKTHKPS KNPTA VDNTA+KAPIQ+EKSTELTTKSTNVTFA
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSLKNPTA-VDNTAQKAPIQIEKSTELTTKSTNVTFA 60

Query: 61  DLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLS 120
           DLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLS
Sbjct: 61  DLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLS 120

Query: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180
           ETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVI
Sbjct: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180

Query: 181 ATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFS 240
           ATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFS
Sbjct: 181 ATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFS 240

Query: 241 ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMG 300
           ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQY+F+PKNVKDVYLLHIMSKMKDMG
Sbjct: 241 ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYIFLPKNVKDVYLLHIMSKMKDMG 300

Query: 301 IRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVLLATDV 360
           +RSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERL+ALYRFKSGQAPVLLATDV
Sbjct: 301 VRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLAALYRFKSGQAPVLLATDV 360

Query: 361 ASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEAN 420
           ASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEAN
Sbjct: 361 ASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEAN 420

Query: 421 LGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLK 480
           LGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLK
Sbjct: 421 LGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLK 480

Query: 481 KRSRKRRREKASKELGAV 498
           KRSRKRRREK SKELGAV
Sbjct: 481 KRSRKRRREKGSKELGAV 496

[Close]

BLAST of Cp4.1LG05g10340 vs. NCBI nr
Match: XP_008456302.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo] >KAA0054684.1 DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo var. makuwa] >TYK08588.1 DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo var. makuwa])

HSP 1 Score: 853 bits (2205), Expect = 4.41e-310
Identity = 447/491 (91.04%), Postives = 469/491 (95.52%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAVDNTAEKAPIQVEKSTELTTKSTN-VTF 60
           MDQEV VD NFPLFSK HRK HKPS+ NPTAAV+N A K+ +Q+EKSTELTTKSTN VTF
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSE-NPTAAVENIAPKSSLQIEKSTELTTKSTNNVTF 60

Query: 61  ADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQL 120
           +DLGLSEWIVQTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALPILQ+L
Sbjct: 61  SDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRL 120

Query: 121 SETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIV 180
           SETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDML+QTQSLLKRPHIV
Sbjct: 121 SETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKRPHIV 180

Query: 181 IATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLF 240
           IATPGRVKVLLEENPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNRQTLLF
Sbjct: 181 IATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLF 240

Query: 241 SATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDM 300
           SATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLHI+SKM+DM
Sbjct: 241 SATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSKMEDM 300

Query: 301 GIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVLLATD 360
           GIRSAIIFV TCKSCH LGLLLE LDQ+VAALHSFKSQSERL+ALYRFKSGQ PVLLATD
Sbjct: 301 GIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVLLATD 360

Query: 361 VASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEA 420
           VASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGR GLAVSFITQNDV LIHEIEA
Sbjct: 361 VASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEA 420

Query: 421 NLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLL 480
           NLGK+LEIFECKENEVLEN+TKVYKAR VA MKMVDDGFEEKVKERKKQK KTLAEKGLL
Sbjct: 421 NLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAEKGLL 480

Query: 481 KKRSRKRRREK 490
           KKR+++RR+EK
Sbjct: 481 KKRNKRRRKEK 489

[Close]

BLAST of Cp4.1LG05g10340 vs. ExPASy TrEMBL
Match: A0A6J1G6B4 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita moschata OX=3662 GN=LOC111451228 PE=3 SV=1)

HSP 1 Score: 934 bits (2415), Expect = 0.0
Identity = 491/503 (97.61%), Postives = 494/503 (98.21%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAA-----VDNTAEKAPIQVEKSTELTTKST 60
           MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAA     VDNTAEKAPIQ+EKSTELTTKST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
           NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR
Sbjct: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300

Query: 301 MKDMGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVL 360
           MKDMG+RSAIIFVHTCKSCHHLGLLL ELDQDV ALHSFKSQSERL+ALYRFKSGQAPVL
Sbjct: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAE 480
           EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFK LAE
Sbjct: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480

Query: 481 KGLLKKRSRKRRREKASKELGAV 498
           KGLLKKRSRKRRREKASKELGAV
Sbjct: 481 KGLLKKRSRKRRREKASKELGAV 502

[Close]

BLAST of Cp4.1LG05g10340 vs. ExPASy TrEMBL
Match: A0A6J1L281 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita maxima OX=3661 GN=LOC111499736 PE=3 SV=1)

HSP 1 Score: 934 bits (2415), Expect = 0.0
Identity = 488/498 (97.99%), Postives = 494/498 (99.20%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAVDNTAEKAPIQVEKSTELTTKSTNVTFA 60
           MDQEVTVDENFPLFSKSHRKTHKPS KNPTA VDNTA+KAPIQ+EKSTELTTKSTNVTFA
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSLKNPTA-VDNTAQKAPIQIEKSTELTTKSTNVTFA 60

Query: 61  DLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLS 120
           DLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLS
Sbjct: 61  DLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLS 120

Query: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180
           ETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVI
Sbjct: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180

Query: 181 ATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFS 240
           ATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFS
Sbjct: 181 ATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFS 240

Query: 241 ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMG 300
           ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQY+F+PKNVKDVYLLHIMSKMKDMG
Sbjct: 241 ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYIFLPKNVKDVYLLHIMSKMKDMG 300

Query: 301 IRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVLLATDV 360
           +RSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERL+ALYRFKSGQAPVLLATDV
Sbjct: 301 VRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLAALYRFKSGQAPVLLATDV 360

Query: 361 ASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEAN 420
           ASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEAN
Sbjct: 361 ASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEAN 420

Query: 421 LGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLK 480
           LGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLK
Sbjct: 421 LGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLK 480

Query: 481 KRSRKRRREKASKELGAV 498
           KRSRKRRREK SKELGAV
Sbjct: 481 KRSRKRRREKGSKELGAV 496

[Close]

BLAST of Cp4.1LG05g10340 vs. ExPASy TrEMBL
Match: A0A5D3CBL8 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00060 PE=3 SV=1)

HSP 1 Score: 853 bits (2205), Expect = 2.13e-310
Identity = 447/491 (91.04%), Postives = 469/491 (95.52%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAVDNTAEKAPIQVEKSTELTTKSTN-VTF 60
           MDQEV VD NFPLFSK HRK HKPS+ NPTAAV+N A K+ +Q+EKSTELTTKSTN VTF
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSE-NPTAAVENIAPKSSLQIEKSTELTTKSTNNVTF 60

Query: 61  ADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQL 120
           +DLGLSEWIVQTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALPILQ+L
Sbjct: 61  SDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRL 120

Query: 121 SETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIV 180
           SETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDML+QTQSLLKRPHIV
Sbjct: 121 SETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKRPHIV 180

Query: 181 IATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLF 240
           IATPGRVKVLLEENPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNRQTLLF
Sbjct: 181 IATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLF 240

Query: 241 SATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDM 300
           SATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLHI+SKM+DM
Sbjct: 241 SATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSKMEDM 300

Query: 301 GIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVLLATD 360
           GIRSAIIFV TCKSCH LGLLLE LDQ+VAALHSFKSQSERL+ALYRFKSGQ PVLLATD
Sbjct: 301 GIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVLLATD 360

Query: 361 VASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEA 420
           VASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGR GLAVSFITQNDV LIHEIEA
Sbjct: 361 VASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEA 420

Query: 421 NLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLL 480
           NLGK+LEIFECKENEVLEN+TKVYKAR VA MKMVDDGFEEKVKERKKQK KTLAEKGLL
Sbjct: 421 NLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAEKGLL 480

Query: 481 KKRSRKRRREK 490
           KKR+++RR+EK
Sbjct: 481 KKRNKRRRKEK 489

[Close]

BLAST of Cp4.1LG05g10340 vs. ExPASy TrEMBL
Match: A0A1S3C309 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo OX=3656 GN=LOC103496288 PE=3 SV=1)

HSP 1 Score: 853 bits (2205), Expect = 2.13e-310
Identity = 447/491 (91.04%), Postives = 469/491 (95.52%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAVDNTAEKAPIQVEKSTELTTKSTN-VTF 60
           MDQEV VD NFPLFSK HRK HKPS+ NPTAAV+N A K+ +Q+EKSTELTTKSTN VTF
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSE-NPTAAVENIAPKSSLQIEKSTELTTKSTNNVTF 60

Query: 61  ADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQL 120
           +DLGLSEWIVQTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALPILQ+L
Sbjct: 61  SDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRL 120

Query: 121 SETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIV 180
           SETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDML+QTQSLLKRPHIV
Sbjct: 121 SETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKRPHIV 180

Query: 181 IATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLF 240
           IATPGRVKVLLEENPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNRQTLLF
Sbjct: 181 IATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLF 240

Query: 241 SATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDM 300
           SATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLHI+SKM+DM
Sbjct: 241 SATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSKMEDM 300

Query: 301 GIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVLLATD 360
           GIRSAIIFV TCKSCH LGLLLE LDQ+VAALHSFKSQSERL+ALYRFKSGQ PVLLATD
Sbjct: 301 GIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVLLATD 360

Query: 361 VASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEA 420
           VASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGR GLAVSFITQNDV LIHEIEA
Sbjct: 361 VASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEA 420

Query: 421 NLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLL 480
           NLGK+LEIFECKENEVLEN+TKVYKAR VA MKMVDDGFEEKVKERKKQK KTLAEKGLL
Sbjct: 421 NLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAEKGLL 480

Query: 481 KKRSRKRRREK 490
           KKR+++RR+EK
Sbjct: 481 KKRNKRRRKEK 489

[Close]

BLAST of Cp4.1LG05g10340 vs. ExPASy TrEMBL
Match: A0A6J1D9D5 (DEAD-box ATP-dependent RNA helicase 36 OS=Momordica charantia OX=3673 GN=LOC111018118 PE=3 SV=1)

HSP 1 Score: 842 bits (2175), Expect = 9.92e-306
Identity = 448/499 (89.78%), Postives = 470/499 (94.19%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAA-----VDNTAEKAPIQVEKSTELTTKST 60
           MD+EVTVDENFPLF+KSHRK HKPSQ NPT       V+  A K P+QVEKST+L T ST
Sbjct: 1   MDEEVTVDENFPLFAKSHRKKHKPSQ-NPTGGPVSTIVETIASKKPLQVEKSTDLATTST 60

Query: 61  N-VTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
           N VTFADLGLSEWIV+TCKELAM+KPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP
Sbjct: 61  NNVTFADLGLSEWIVRTCKELAMRKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120

Query: 121 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 180
           ILQ+LSETPFGVFALVVTPTRELAYQLAEQFRALGSSL+LRCSVVVGGMDMLNQ QSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLHLRCSVVVGGMDMLNQAQSLLK 180

Query: 181 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 240
           RPHIVIATPGRVKVLLEENPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPLVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTV+MLKQQYVFIPKNVKDVYLLHI+S
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVEMLKQQYVFIPKNVKDVYLLHILS 300

Query: 301 KMKDMGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPV 360
           KM+DMGIRSAIIFV TC+SCH LGLLLEELDQ+VAALHSFKSQS+RL+ALYRFKSGQ PV
Sbjct: 301 KMEDMGIRSAIIFVQTCRSCHLLGLLLEELDQEVAALHSFKSQSQRLAALYRFKSGQVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 420
           LLATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGR GLAVSFITQNDVELI
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRGGLAVSFITQNDVELI 420

Query: 421 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLA 480
           HEIEA +GK+LE FECKENEVLEN+TKVYKARRVAAMKMVDDGFEEKVKERKKQK KTLA
Sbjct: 421 HEIEAVVGKQLENFECKENEVLENITKVYKARRVAAMKMVDDGFEEKVKERKKQKQKTLA 480

Query: 481 EKGLLKKRSR-KRRREKAS 492
           EKGLLKK+ R K+RREK S
Sbjct: 481 EKGLLKKKKRSKKRREKTS 497

[Close]

BLAST of Cp4.1LG05g10340 vs. TAIR 10
Match: AT1G16280.1 (RNA helicase 36 )

HSP 1 Score: 609.4 bits (1570), Expect = 2.6e-174
Identity = 323/473 (68.29%), Postives = 388/473 (82.03%), Query Frame = 0


Query: 25  SQKNPTAAVDNTAEKAPI-----QVEKSTEL-----TTKSTNVTFADLGLSEWIVQTCKE 84
           S+KNP   V+  ++K        Q EK T       TT +TN  F  LGL+EW V+TCKE
Sbjct: 18  SRKNPKTVVNIQSQKLDSDQNTPQFEKFTNPNPSSDTTSATN--FEGLGLAEWAVETCKE 77

Query: 85  LAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLSETPFGVFALVVTPT 144
           L M+KPT VQTHC+PKILAG DVLGLAQTGSGKTAAFALPIL +L+E P+GVFALVVTPT
Sbjct: 78  LGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPT 137

Query: 145 RELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLLEENP 204
           RELA+QLAEQF+ALGS LNLRCSV+VGGMDML QT SL+ RPHIVI TPGR+KVLLE NP
Sbjct: 138 RELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNP 197

Query: 205 DIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFSATMTKDLETLLELS 264
           D+P VFS+TKFLVLDEADRVLDVGF++EL+ IF+CLP++RQTLLFSATMT +L+ LLE S
Sbjct: 198 DVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHS 257

Query: 265 ANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMGIRSAIIFVHTCKSC 324
           +NKAYFYEAYEG KTVD L QQ++F  K+ K++YL+HI+S+M+D GIRSA+IFV TC++C
Sbjct: 258 SNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTC 317

Query: 325 HHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVLLATDVASRGLDIPTVDLVI 384
             L L+L+EL+ +  A+HS  SQS RLSAL +FKSG+ P+LLATDVASRGLDIPTVDLVI
Sbjct: 318 QRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVI 377

Query: 385 NYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEANLGKKLEIFECKENE 444
           NYDIPR  PRDYVHRVGRTARAGR GLAVS IT+ DV+LIH+IE  +GKK+E +  K   
Sbjct: 378 NYDIPR-DPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVIT 437

Query: 445 VLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLKKRSRKRR 488
               VTKV KA+RVA MKM+D+GFE+KVK+R+K K KTLA+KGLLKKR ++++
Sbjct: 438 DSLEVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTLADKGLLKKRGKRQK 487

[Close]

BLAST of Cp4.1LG05g10340 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 334.0 bits (855), Expect = 2.1e-91
Identity = 199/450 (44.22%), Postives = 281/450 (62.44%), Query Frame = 0


Query: 58  TFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQ 117
           TFA+LG+ E +V+ C+ L  K P+ +Q   +P  L G DV+GLAQTGSGKT AFA+PILQ
Sbjct: 10  TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69

Query: 118 QLSETPF------------GVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDM 177
            L E  +              FA V++PTRELA Q+AEQF ALG+ ++LRC+V+VGG+D 
Sbjct: 70  ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129

Query: 178 LNQTQSLLKRPHIVIATPGRVKVLLEENPDIPAVFSKT-KFLVLDEADRVLDVGFEEELK 237
           + QT +L KRPH+++ATPGR   L +   D      K+ K+LVLDEADR+L+  FE+ L 
Sbjct: 130 MQQTIALGKRPHVIVATPGR---LWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLN 189

Query: 238 VIFKCLPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNV 297
            I + +P  R+T LFSATMTK +  L           EA   + TVD LKQQY F+    
Sbjct: 190 QILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKY 249

Query: 298 KDVYLLHIMSKMKDMGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSAL 357
           KD YL++I+S+M +    +++IF  TC     L L+L  L      +    +QS+RL AL
Sbjct: 250 KDCYLVYILSEMPE---STSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGAL 309

Query: 358 YRFKSGQAPVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVS 417
            +FK+G+  +L+ TDVASRGLDIP+VD+VINYDIP    +DY+HRVGRTARAGR G+ +S
Sbjct: 310 NKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPT-NSKDYIHRVGRTARAGRSGVGIS 369

Query: 418 FITQNDVELIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKE 477
            + Q ++E   +IE  +GKKL  +  +E+EVL  + +V +A++++AM M + G  ++  E
Sbjct: 370 LVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRRGE 429

Query: 478 RKKQKFKTLAEKGLLKKRSRKRRREKASKE 495
             ++  + L   G  K R  K R     K+
Sbjct: 430 DDEESERFL---GGNKDRGNKERGGNKDKK 449

[Close]

BLAST of Cp4.1LG05g10340 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 246.5 bits (628), Expect = 4.5e-65
Identity = 152/383 (39.69%), Postives = 216/383 (56.40%), Query Frame = 0


Query: 58  TFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQ 117
           TF +L LS  +++ C+ L  KKPT +Q  CIP  L G D+   A TGSGKTAAFALP L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227

Query: 118 QLSETPFGVFA---LVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 177
           +L   P  VFA   L++TPTRELA Q+    + L    +++C ++VGG+ +  Q   L  
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287

Query: 178 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 237
            P IV+ATPGR+   L  +  +         L+LDEADR+L  GF  E+  + +  P+ R
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVD--LDDLAVLILDEADRLLQTGFATEITELVRLCPKRR 347

Query: 238 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 297
           QT+LFSATMT++++ L++LS NK     A    +    L ++ V I +  +      ++S
Sbjct: 348 QTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLS 407

Query: 298 KMKDMGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPV 357
                     IIF  T ++ H L +L        A LH   +Q++RL +L  F+  +   
Sbjct: 408 LCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDF 467

Query: 358 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 417
           L+ATDVA+RGLDI  V  VINY  PR     YVHRVGRTARAGR G AV+F+T +D  L+
Sbjct: 468 LIATDVAARGLDIIGVQTVINYACPREID-SYVHRVGRTARAGREGYAVTFVTDSDRSLL 527

Query: 418 HEIEANLGKKLEIFECKENEVLE 438
             I   +G KL+     E  +++
Sbjct: 528 KVIAKKVGSKLKSRVIPEQSIVK 547

[Close]

BLAST of Cp4.1LG05g10340 vs. TAIR 10
Match: AT5G65900.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 224.2 bits (570), Expect = 2.4e-58
Identity = 150/425 (35.29%), Postives = 221/425 (52.00%), Query Frame = 0


Query: 2   DQEVTVDENFPLFSKSHRKTHKPSQKNPTAAVDNTAEKAPIQVEKSTELTTKSTNVTFAD 61
           + EV  +E  P       K  K  Q+  T A     E    + EK  E T+  TN TF  
Sbjct: 106 EDEVIAEEEEP-------KKKKKKQRKDTEAKSEEEEVEDKEEEKKLEETSIMTNKTFES 165

Query: 62  LGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLSE 121
           L LS+   ++ KE+   + T +Q   IP ++ G DVLG A+TGSGKT AF +P ++ L  
Sbjct: 166 LSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYR 225

Query: 122 TPF----GVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPH 181
             F    G   LV+ PTRELA Q     + L    +     V+GG     + + L K  +
Sbjct: 226 VKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAKGVN 285

Query: 182 IVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTL 241
           +++ATPGR+   LE       +F   KFLV+DEADR+L+  FEE+LK I   LP+ RQT 
Sbjct: 286 LLVATPGRLLDHLENTNGF--IFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQTS 345

Query: 242 LFSATMTKDLETLLELSANKAYFYEAYEGFKTV--DMLKQQYVFIPKNVKDVYLLHIMSK 301
           LFSAT +  +E L  +S     + +  EG K V  + L+Q Y  +P  ++ ++LL  + +
Sbjct: 346 LFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKR 405

Query: 302 MKDMGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVL 361
            +  G +  ++F  TCKS      L   +  D   +     Q++R     +F   +  +L
Sbjct: 406 FQ--GKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGIL 465

Query: 362 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARA-GRHGLAVSFITQNDVELI 420
           L T+VA+RGLD P VD ++ YD P   P DY+HRVGRTAR  G  G A+  +T  +++ I
Sbjct: 466 LCTNVAARGLDFPHVDWIVQYDPPD-NPTDYIHRVGRTARGEGAKGKALLVLTPQELKFI 518

[Close]

BLAST of Cp4.1LG05g10340 vs. TAIR 10
Match: AT2G33730.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 217.6 bits (553), Expect = 2.2e-56
Identity = 134/383 (34.99%), Postives = 208/383 (54.31%), Query Frame = 0


Query: 64  LSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLSETP 123
           L+  +++  +    KKP+ +Q   IP  L   DV+G+A+TGSGKTAAF LP+L  +S  P
Sbjct: 320 LTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLP 379

Query: 124 --------FGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 183
                    G +A+V+ PTRELA Q+ E+       L  R + +VGG  +  Q   + + 
Sbjct: 380 PMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQG 439

Query: 184 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRN-- 243
             IVIATPGR+   LE      AV ++  ++VLDEADR++D+GFE ++  +   +P +  
Sbjct: 440 CEIVIATPGRLIDCLERR---YAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNL 499

Query: 244 ---------------RQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYV 303
                          R T +FSATM   +E L                 KT D++ Q  +
Sbjct: 500 KPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVI 559

Query: 304 FIPKNVKDVYLLHIMSKMKDMGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQS 363
            + ++ K      +   + ++G ++AI+FV+T K+C  +   L++    V  LH  KSQ 
Sbjct: 560 MMKESEK---FFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQE 619

Query: 364 ERLSALYRFKSGQAPVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGR 422
           +R  +L  F++ +  VL+ATDV  RG+DIP V  VINYD+P+     Y HR+GRT RAG+
Sbjct: 620 QREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEM-YTHRIGRTGRAGK 679

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g10340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA27	3.7e-173	68.29	DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 P...	[more]
Q8L4E9	6.8e-143	55.11	DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9Y6V7	2.3e-106	48.23	Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 ...	[more]
Q4FZF3	6.2e-104	47.12	Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2...	[more]
Q55BR9	1.7e-101	48.79	Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of Cp4.1LG05g10340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534745.1	0.0	99.80	DEAD-box ATP-dependent RNA helicase 36 [Cucurbita pepo subsp. pepo]	[more]
KAG6605347.1	0.0	98.21	DEAD-box ATP-dependent RNA helicase 36, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022947338.1	0.0	97.61	DEAD-box ATP-dependent RNA helicase 36 [Cucurbita moschata] >XP_022947339.1 DEAD...	[more]
XP_023007160.1	0.0	97.99	DEAD-box ATP-dependent RNA helicase 36 [Cucurbita maxima]	[more]
XP_008456302.1	4.41e-310	91.04	PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo] >KAA0054684.1 D...	[more]

BLAST of Cp4.1LG05g10340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6B4	0.0	97.61	DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1L281	0.0	97.99	DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita maxima OX=3661 GN=LOC1114997...	[more]
A0A5D3CBL8	2.13e-310	91.04	DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C309	2.13e-310	91.04	DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo OX=3656 GN=LOC103496288 P...	[more]
A0A6J1D9D5	9.92e-306	89.78	DEAD-box ATP-dependent RNA helicase 36 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Cp4.1LG05g10340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16280.1	2.6e-174	68.29	RNA helicase 36	[more]
AT5G60990.1	2.1e-91	44.22	DEA(D/H)-box RNA helicase family protein	[more]
AT4G16630.1	4.5e-65	39.69	DEA(D/H)-box RNA helicase family protein	[more]
AT5G65900.1	2.4e-58	35.29	DEA(D/H)-box RNA helicase family protein	[more]
AT2G33730.1	2.2e-56	34.99	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 76..276 e-value: 6.0E-51 score: 185.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 88..261 score: 31.106606
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 315..397 e-value: 1.8E-28 score: 110.6
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 302..397 e-value: 4.9E-26 score: 91.3
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 288..436 score: 22.54414
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 81..250 e-value: 2.1E-43 score: 148.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 269..496 e-value: 1.5E-47 score: 164.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 16..262 e-value: 7.4E-71 score: 240.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 125..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR24031:SF240	ATP-DEPENDENT RNA HELICASE DDX49-RELATED	coord: 55..487
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 55..487
None	No IPR available	CDD	cd17955	DEADc_DDX49	coord: 59..262 e-value: 1.19659E-120 score: 349.986
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 273..406 e-value: 2.7845E-50 score: 166.143
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 207..215
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 57..85 score: 10.560987

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g10340.1	Cp4.1LG05g10340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0090406	pollen tube
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity