Cp4.1LG05g09650 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g09650
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Elf4 domain-containing protein
Location	Cp4.1LG05: 6314053 .. 6314412 (+)
RNA-Seq Expression	Cp4.1LG05g09650
Synteny	Cp4.1LG05g09650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACAAACGGCCTAAGTCAGATGAGCGAGATAAAAGCGACGACGGTGATTTAGAGGCGGAGGAATGCGATATGGAGGTCTGGAATATGCTTAGGAAGAGCTTCCGTCAGGTGCAGTCTGTATTGGAACATAATCGTTTGTTAATCCAGCAGGTGAACGAGAATCAGCAGTCGAGGATCTCCGATAATCTGGTCAACAACATCTCGTTGATCCATGAAATTAATGGTAATATCTCTCGTGTTATCTCGATTTACTCCGATTTGTCTGCCAGTTTCCTCACTACAATTCAGCAGAGGCGTTGTGTTACGGAGTCGAAATCCGGTGAAAACAATGGAGGTGGAGGAACTCACGAGTAA

mRNA sequence

ATGAAGAACAAACGGCCTAAGTCAGATGAGCGAGATAAAAGCGACGACGGTGATTTAGAGGCGGAGGAATGCGATATGGAGGTCTGGAATATGCTTAGGAAGAGCTTCCGTCAGGTGCAGTCTGTATTGGAACATAATCGTTTGTTAATCCAGCAGGTGAACGAGAATCAGCAGTCGAGGATCTCCGATAATCTGGTCAACAACATCTCGTTGATCCATGAAATTAATGGTAATATCTCTCGTGTTATCTCGATTTACTCCGATTTGTCTGCCAGTTTCCTCACTACAATTCAGCAGAGGCGTTGTGTTACGGAGTCGAAATCCGGTGAAAACAATGGAGGTGGAGGAACTCACGAGTAA

Coding sequence (CDS)

ATGAAGAACAAACGGCCTAAGTCAGATGAGCGAGATAAAAGCGACGACGGTGATTTAGAGGCGGAGGAATGCGATATGGAGGTCTGGAATATGCTTAGGAAGAGCTTCCGTCAGGTGCAGTCTGTATTGGAACATAATCGTTTGTTAATCCAGCAGGTGAACGAGAATCAGCAGTCGAGGATCTCCGATAATCTGGTCAACAACATCTCGTTGATCCATGAAATTAATGGTAATATCTCTCGTGTTATCTCGATTTACTCCGATTTGTCTGCCAGTTTCCTCACTACAATTCAGCAGAGGCGTTGTGTTACGGAGTCGAAATCCGGTGAAAACAATGGAGGTGGAGGAACTCACGAGTAA

Protein sequence

MKNKRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISDNLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTESKSGENNGGGGTHE

Homology

[Close]

BLAST of Cp4.1LG05g09650 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-16
Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 3   NKRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRIS 62
           N+ P+ +E D  D     A E D+EVW+ L   F++ Q  L+ NR LIQ+VNEN  SRI 
Sbjct: 13  NRSPEMNENDGEDVAASAAVE-DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIP 72

Query: 63  DNLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTE 106
           DN+  N+ LI+EINGNIS+V+ IYSDLS +F     QRR  T+
Sbjct: 73  DNVSRNVGLINEINGNISQVMEIYSDLSLNFAKKFDQRRRTTK 114

[Close]

BLAST of Cp4.1LG05g09650 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14
Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 4   KRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISD 63
           KR    +R ++   + E  E D  +W  L ++FRQVQSVL+ NR LIQQVN+N QSR++D
Sbjct: 2   KRNGETKRRRNVAEEAEQGE-DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMAD 61

Query: 64  NLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTESKSGENNGG 115
           N+  N++LI E+NGNIS+V+++YSDL+ SF +           K+G + GG
Sbjct: 62  NMSKNVALIQELNGNISKVVNMYSDLNTSFSSGFH------GGKNGHDGGG 105

[Close]

BLAST of Cp4.1LG05g09650 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 6.6e-12
Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 23  ECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISDNLVNNISLIHEINGNISRV 82
           + D ++     KSF QVQ++L+HNRLLI ++N+N +S+I DNL  N+ LI E+N N+ RV
Sbjct: 15  QMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRNVGLIRELNNNVRRV 74

Query: 83  ISIYSDLSASFLTTIQQRRCVTESKSGENNG 114
             +Y DLS +F  +++     +E  S E  G
Sbjct: 75  AHLYVDLSNNFSKSME---ASSEGDSSEGRG 102

[Close]

BLAST of Cp4.1LG05g09650 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.3e-11
Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 25  DMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISDNLVNNISLIHEINGNISRVIS 84
           D ++    +KSF  VQ +L+ NRLLI ++N+N +S+  DNL  N+ LI E+N NI RV S
Sbjct: 16  DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVAS 75

Query: 85  IYSDLSASFLTTIQQRRCVTESKSGENNG 114
           +Y DLS SF       R V  S  GE++G
Sbjct: 76  LYGDLSHSF------ARSVDASSEGESSG 98

[Close]

BLAST of Cp4.1LG05g09650 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 20  EAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISDNLVNNISLIHEINGNI 79
           E  + D ++    +KSF QVQ +L+ NRLLI ++N+N +S+ +D+L  N+ LI E+N NI
Sbjct: 15  ERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNVGLIRELNNNI 74

Query: 80  SRVISIYSDLSASFLTTIQQRRCVTESKSGENNG 114
             V S+Y DLS SF       R V  S  GE+ G
Sbjct: 75  RTVASLYGDLSHSF------ARSVDASSEGESTG 102

[Close]

BLAST of Cp4.1LG05g09650 vs. NCBI nr
Match: XP_023532325.1 (protein EARLY FLOWERING 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226 bits (576), Expect = 2.46e-74
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MKNKRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSR 60
           MKNKRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSR
Sbjct: 1   MKNKRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSR 60

Query: 61  ISDNLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTESKSGENNGGGGTHE 119
           ISDNLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTESKSGENNGGGGTHE
Sbjct: 61  ISDNLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTESKSGENNGGGGTHE 119

[Close]

BLAST of Cp4.1LG05g09650 vs. NCBI nr
Match: KAG7035362.1 (Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211 bits (537), Expect = 2.18e-68
Identity = 113/119 (94.96%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 1   MKNKRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSR 60
           MKNK  KSDE DKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSR
Sbjct: 1   MKNKGAKSDEGDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSR 60

Query: 61  ISDNLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTESKSGENNGGGGTHE 119
           ISDNLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQ+RCVTESKSGENNGG G HE
Sbjct: 61  ISDNLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQKRCVTESKSGENNGGRGIHE 119

[Close]

BLAST of Cp4.1LG05g09650 vs. NCBI nr
Match: XP_023006797.1 (protein ELF4-LIKE 1-like [Cucurbita maxima])

HSP 1 Score: 137 bits (345), Expect = 1.45e-39
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MKNKRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSR 60
          MKNKRPKSDERD SDDGDLEAEECDMEV NMLRKSFRQVQSVLEHNRL+IQQVNENQQSR
Sbjct: 1  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSR 60

Query: 61 ISDNLVNNISLIHEIN 76
          ISDNLVNNISLIHEIN
Sbjct: 61 ISDNLVNNISLIHEIN 76

[Close]

BLAST of Cp4.1LG05g09650 vs. NCBI nr
Match: XP_022948227.1 (protein EARLY FLOWERING 4-like [Cucurbita moschata])

HSP 1 Score: 134 bits (336), Expect = 4.57e-38
Identity = 80/119 (67.23%), Postives = 83/119 (69.75%), Query Frame = 0


Query: 1   MKNKRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSR 60
           MKNK  KSDE DK DDGDLE EECDMEVWNMLRKSF QVQSVLEHNRLLIQQVNENQQSR
Sbjct: 1   MKNKGAKSDEGDKCDDGDLEVEECDMEVWNMLRKSFPQVQSVLEHNRLLIQQVNENQQSR 60

Query: 61  ISDNLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTESKSGENNGGGGTHE 119
           IS+NLVNNISLIHEIN  +   +                       KSGENNGG G HE
Sbjct: 61  ISNNLVNNISLIHEINEALCYGV-----------------------KSGENNGGRGIHE 96

[Close]

BLAST of Cp4.1LG05g09650 vs. NCBI nr
Match: KAF5751375.1 (hypothetical protein HS088_TW02G00388 [Tripterygium wilfordii])

HSP 1 Score: 115 bits (289), Expect = 2.79e-30
Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 10  ERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISDNLVNNI 69
           E++K  +G+ +AEECD+E W+ L  SFRQVQ+VL+HNR LIQQVNEN QS+I++NL  N+
Sbjct: 43  EKEKKGNGEDDAEECDVEAWDALSSSFRQVQTVLDHNRKLIQQVNENHQSKIAENLAKNV 102

Query: 70  SLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTESK 107
            LI EINGNIS+VISIYSDLS  F   +Q+R  V + K
Sbjct: 103 DLIREINGNISKVISIYSDLSVDFTNIVQKRSGVKDGK 140

[Close]

BLAST of Cp4.1LG05g09650 vs. ExPASy TrEMBL
Match: A0A6J1KWT2 (protein ELF4-LIKE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499461 PE=3 SV=1)

HSP 1 Score: 137 bits (345), Expect = 7.01e-40
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MKNKRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSR 60
          MKNKRPKSDERD SDDGDLEAEECDMEV NMLRKSFRQVQSVLEHNRL+IQQVNENQQSR
Sbjct: 1  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSR 60

Query: 61 ISDNLVNNISLIHEIN 76
          ISDNLVNNISLIHEIN
Sbjct: 61 ISDNLVNNISLIHEIN 76

[Close]

BLAST of Cp4.1LG05g09650 vs. ExPASy TrEMBL
Match: A0A6J1G8L9 (protein EARLY FLOWERING 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451866 PE=3 SV=1)

HSP 1 Score: 134 bits (336), Expect = 2.21e-38
Identity = 80/119 (67.23%), Postives = 83/119 (69.75%), Query Frame = 0


Query: 1   MKNKRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSR 60
           MKNK  KSDE DK DDGDLE EECDMEVWNMLRKSF QVQSVLEHNRLLIQQVNENQQSR
Sbjct: 1   MKNKGAKSDEGDKCDDGDLEVEECDMEVWNMLRKSFPQVQSVLEHNRLLIQQVNENQQSR 60

Query: 61  ISDNLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTESKSGENNGGGGTHE 119
           IS+NLVNNISLIHEIN  +   +                       KSGENNGG G HE
Sbjct: 61  ISNNLVNNISLIHEINEALCYGV-----------------------KSGENNGGRGIHE 96

[Close]

BLAST of Cp4.1LG05g09650 vs. ExPASy TrEMBL
Match: A0A7J7DYC8 (Elf4 domain-containing protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW02G00388 PE=3 SV=1)

HSP 1 Score: 115 bits (289), Expect = 1.35e-30
Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 10  ERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISDNLVNNI 69
           E++K  +G+ +AEECD+E W+ L  SFRQVQ+VL+HNR LIQQVNEN QS+I++NL  N+
Sbjct: 43  EKEKKGNGEDDAEECDVEAWDALSSSFRQVQTVLDHNRKLIQQVNENHQSKIAENLAKNV 102

Query: 70  SLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTESK 107
            LI EINGNIS+VISIYSDLS  F   +Q+R  V + K
Sbjct: 103 DLIREINGNISKVISIYSDLSVDFTNIVQKRSGVKDGK 140

[Close]

BLAST of Cp4.1LG05g09650 vs. ExPASy TrEMBL
Match: A0A067LNP8 (Elf4 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_08467 PE=3 SV=1)

HSP 1 Score: 114 bits (285), Expect = 4.46e-30
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 15  DDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISDNLVNNISLIHE 74
           D+ D+E EECD EVWN L KSFRQVQSVL+ NR LI QVNEN QSRI DN+  N+ LI E
Sbjct: 40  DEDDIEEEECDKEVWNTLCKSFRQVQSVLDQNRDLIHQVNENHQSRIPDNMAKNVPLIRE 99

Query: 75  INGNISRVISIYSDLSASFLTTIQQRRCVTESKSGE 110
           IN NIS+VISIYSDLS +F   +Q+RR +    S E
Sbjct: 100 INRNISKVISIYSDLSVNFSNVVQERRRINNGSSVE 135

[Close]

BLAST of Cp4.1LG05g09650 vs. ExPASy TrEMBL
Match: A0A7J7HN84 (Elf4 domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_007156 PE=3 SV=1)

HSP 1 Score: 114 bits (284), Expect = 8.90e-30
Identity = 59/100 (59.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 15  DDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISDNLVNNISLIHE 74
           DD +   EECD E W+ L KSFRQVQSVL+ NR LIQQVNEN QS++ DNLV N++LI E
Sbjct: 51  DDEEFRGEECDNEAWDRLSKSFRQVQSVLDRNRALIQQVNENHQSKMPDNLVKNVALIRE 110

Query: 75  INGNISRVISIYSDLSASFLTTIQQRRCVTESKSGENNGG 114
           INGNIS+V+S+YSDLS  F   +QQRR +      E + G
Sbjct: 111 INGNISKVMSLYSDLSVDFSNIVQQRRAINNDDHVEKSAG 150

[Close]

BLAST of Cp4.1LG05g09650 vs. TAIR 10
Match: AT2G29950.1 (ELF4-like 1 )

HSP 1 Score: 86.7 bits (213), Expect = 1.4e-17
Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 3   NKRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRIS 62
           N+ P+ +E D  D     A E D+EVW+ L   F++ Q  L+ NR LIQ+VNEN  SRI 
Sbjct: 13  NRSPEMNENDGEDVAASAAVE-DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIP 72

Query: 63  DNLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTE 106
           DN+  N+ LI+EINGNIS+V+ IYSDLS +F     QRR  T+
Sbjct: 73  DNVSRNVGLINEINGNISQVMEIYSDLSLNFAKKFDQRRRTTK 114

[Close]

BLAST of Cp4.1LG05g09650 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) )

HSP 1 Score: 80.9 bits (198), Expect = 7.8e-16
Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 4   KRPKSDERDKSDDGDLEAEECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISD 63
           KR    +R ++   + E  E D  +W  L ++FRQVQSVL+ NR LIQQVN+N QSR++D
Sbjct: 2   KRNGETKRRRNVAEEAEQGE-DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMAD 61

Query: 64  NLVNNISLIHEINGNISRVISIYSDLSASFLTTIQQRRCVTESKSGENNGG 115
           N+  N++LI E+NGNIS+V+++YSDL+ SF +           K+G + GG
Sbjct: 62  NMSKNVALIQELNGNISKVVNMYSDLNTSFSSGFH------GGKNGHDGGG 105

[Close]

BLAST of Cp4.1LG05g09650 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 )

HSP 1 Score: 71.6 bits (174), Expect = 4.7e-13
Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 23  ECDMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISDNLVNNISLIHEINGNISRV 82
           + D ++     KSF QVQ++L+HNRLLI ++N+N +S+I DNL  N+ LI E+N N+ RV
Sbjct: 15  QMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRNVGLIRELNNNVRRV 74

Query: 83  ISIYSDLSASFLTTIQQRRCVTESKSGENNG 114
             +Y DLS +F  +++     +E  S E  G
Sbjct: 75  AHLYVDLSNNFSKSME---ASSEGDSSEGRG 102

[Close]

BLAST of Cp4.1LG05g09650 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 )

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12
Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 25  DMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISDNLVNNISLIHEINGNISRVIS 84
           D ++    +KSF  VQ +L+ NRLLI ++N+N +S+  DNL  N+ LI E+N NI RV S
Sbjct: 16  DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVAS 75

Query: 85  IYSDLSASFLTTIQQRRCVTESKSGENNG 114
           +Y DLS SF       R V  S  GE++G
Sbjct: 76  LYGDLSHSF------ARSVDASSEGESSG 98

[Close]

BLAST of Cp4.1LG05g09650 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 )

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12
Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 25  DMEVWNMLRKSFRQVQSVLEHNRLLIQQVNENQQSRISDNLVNNISLIHEINGNISRVIS 84
           D ++    +KSF  VQ +L+ NRLLI ++N+N +S+  DNL  N+ LI E+N NI RV S
Sbjct: 16  DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVAS 75

Query: 85  IYSDLSASFLTTIQQRRCVTESKSGENNG 114
           +Y DLS SF       R V  S  GE++G
Sbjct: 76  LYGDLSHSF------ARSVDASSEGESSG 98

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g09650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80877	2.0e-16	49.51	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1	[more]
O04211	1.1e-14	45.05	Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1	[more]
Q8S8F5	6.6e-12	41.76	Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1	[more]
Q570U6	4.3e-11	44.94	Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1	[more]
Q94BS8	1.2e-10	42.55	Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1	[more]

BLAST of Cp4.1LG05g09650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532325.1	2.46e-74	100.00	protein EARLY FLOWERING 4-like [Cucurbita pepo subsp. pepo]	[more]
KAG7035362.1	2.18e-68	94.96	Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023006797.1	1.45e-39	96.05	protein ELF4-LIKE 1-like [Cucurbita maxima]	[more]
XP_022948227.1	4.57e-38	67.23	protein EARLY FLOWERING 4-like [Cucurbita moschata]	[more]
KAF5751375.1	2.79e-30	60.20	hypothetical protein HS088_TW02G00388 [Tripterygium wilfordii]	[more]

BLAST of Cp4.1LG05g09650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KWT2	7.01e-40	96.05	protein ELF4-LIKE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499461 PE=3 SV=1	[more]
A0A6J1G8L9	2.21e-38	67.23	protein EARLY FLOWERING 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451866 PE=...	[more]
A0A7J7DYC8	1.35e-30	60.20	Elf4 domain-containing protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW02...	[more]
A0A067LNP8	4.46e-30	63.54	Elf4 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_08467 PE=3 S...	[more]
A0A7J7HN84	8.90e-30	59.00	Elf4 domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_007156 PE=3...	[more]

BLAST of Cp4.1LG05g09650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29950.1	1.4e-17	49.51	ELF4-like 1	[more]
AT2G40080.1	7.8e-16	45.05	Protein of unknown function (DUF1313)	[more]
AT2G06255.1	4.7e-13	41.76	ELF4-like 3	[more]
AT1G17455.1	3.1e-12	44.94	ELF4-like 4	[more]
AT1G17455.2	3.1e-12	44.94	ELF4-like 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009741	Protein EARLY FLOWERING 4 domain	PFAM	PF07011	Elf4	coord: 24..101 e-value: 1.8E-34 score: 117.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR33469:SF1	PROTEIN ELF4-LIKE 1	coord: 11..111
IPR040462	Protein EARLY FLOWERING 4	PANTHER	PTHR33469	PROTEIN ELF4-LIKE 4	coord: 11..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g09650.1	Cp4.1LG05g09650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042753	positive regulation of circadian rhythm
cellular_component	GO:0005634	nucleus