Cp4.1LG05g09590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g09590
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Proliferating cell nuclear antigen
Location	Cp4.1LG05: 6206880 .. 6208451 (-)
RNA-Seq Expression	Cp4.1LG05g09590
Synteny	Cp4.1LG05g09590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGCGCTTTTCCAAACCCTACCCAGCCCCAGCAATTGCTCTGTAATTTCTCTGAAAATGTTGGAACTTCATCTTGTTCAGAATTCGCTCCTCAAGAAGGTCTTGGAGTCGATCAAAGATTTTGTGACCGATGCAAACTTCCATTATTCCGCCACTGGATGCTCGCTTCAGGCCATGGATTCGAGCCATGTTACCCTGGTGGTTCTTCTCCTTCGAGCGGAGGCCTTTGAACTATATCGCTGCGACAGAAACATTTCCGTGGGAATGAACTTGAACAACATGTCGAAAATGCTCAAGTGTGCCGGCAATGATGATGCCATTAGAATCAAGGCTGATGACGGCAATGATACTATCACTTTCGTGTTTGAAAGCCCCAGTATGATCTTTCTCTTTCTGTCTTTCTTTAGTTATTTCAATCATTTTAGAACCTCGTTCTCGTAGTTATGTAGTTTTTAGATTATCGGATTATTTTTCTGTTGTCTTTTGAACTTCTTGATCTGTTAGATTTAAGTAATCGTAGTTGCATCTCAAGGTTCATTTCGTCTCTAAACATAGTATGATTCTTAGGTCAGTTTCAATGATTGTTAACTAGAAGTGCATCGGACTCTGGATCTGAAGCGAGTATCTGATGCTTTCTTTCTTACCTTTTGTCCGTCCCATCCATGGTATCAGCCCAACGCAAGGTTTCCAATTTTGAGATGAGATTGATGGACATCGACAGCGAGCTACTTGGAATTCCAGATTTAGAGCATCATGCTATTGTTAAAATGCCTTCCGTTGAGTTCGCTAGAATTTGCAAAGATCTCAGCAACATTGGTGATACTGGTACATCCTAATACCTTAACCTTTCAGTGTTTTATCTGATTTACCTGACAAATTCTTGGATTATGAAAAAATTAATTGACTTCACCGATTCTTGCAGTTATAATCTCTGTGACGAGGGAAGATGTCACGTTCTCAACAATAGGTGATATAGGATCTGCAAACATTGTTTGCAGCCAGAACGCTGCTGTAGCCAAGGTCTGCATGCGCCTTAACACTTCAGAGTTCTGATTTCATTAACTTAATTCTGTTTTGAATACTGAATTTTGATCTGTCTCAATTTTGGGGAATGCAGCCAGAAGAAGCAACAGTTATAGAGTTAAACGAGCCAGTTTCTTTGACATTTTCTTTGAGGTATATGAATTTATTCACCAAGGCTACACCCCTATCTAATACAGTTACCATCAGCCTGGCTTCTGAGCTACCTGCCGTTGTTGAGTACAAAATAGCAGAGATGGGACATGTTAGATTTTACATGGATCCCAGTTAGAAGACGATGAGGATGAGACAAAACCTCAGGTATAAATGTATATTCAGTTGCCATTTGTTTCATAAATCCATTTAGGACGTTTCCTGCAGTAGAGTAGTTAGTTGTATTTTAGGAGTTTTTCTTGTCCAATACGTACTTTTCCTGTTTCTGAGCTTACAATTTTAACAATTTCCCCTCTCATCATATGATCATTTGATTTTGATATGCGATATTTGAGGGATGAAGATTGAATGTTTTGGCCAATATAATTGTAACCATAA

mRNA sequence

CGCGCGCTTTTCCAAACCCTACCCAGCCCCAGCAATTGCTCTGTAATTTCTCTGAAAATGTTGGAACTTCATCTTGTTCAGAATTCGCTCCTCAAGAAGGTCTTGGAGTCGATCAAAGATTTTGTGACCGATGCAAACTTCCATTATTCCGCCACTGGATGCTCGCTTCAGGCCATGGATTCGAGCCATGTTACCCTGGTGGTTCTTCTCCTTCGAGCGGAGGCCTTTGAACTATATCGCTGCGACAGAAACATTTCCGTGGGAATGAACTTGAACAACATGTCGAAAATGCTCAAGTGTGCCGGCAATGATGATGCCATTAGAATCAAGGCTGATGACGGCAATGATACTATCACTTTCGTGTTTGAAAGCCCCACCCAACGCAAGGTTTCCAATTTTGAGATGAGATTGATGGACATCGACAGCGAGCTACTTGGAATTCCAGATTTAGAGCATCATGCTATTGTTAAAATGCCTTCCGTTGAGTTCGCTAGAATTTGCAAAGATCTCAGCAACATTGGTGATACTGTTATAATCTCTGTGACGAGGGAAGATGTCACGTTCTCAACAATAGGTGATATAGGATCTGCAAACATTGTTTGCAGCCAGAACGCTGCTGTAGCCAAGCCAGAAGAAGCAACAGTTATAGAGTTAAACGAGCCAGTTTCTTTGACATTTTCTTTGAGGTATATGAATTTATTCACCAAGGCTACACCCCTATCTAATACAGTTACCATCAGCCTGGCTTCTGAGCTACCTGCCGTTGTTGAGTACAAAATAGCAGAGATGGGACATGTTAGATTTTACATGGATCCCAGTTAGAAGACGATGAGGATGAGACAAAACCTCAGGTATAAATGTATATTCAGTTGCCATTTGTTTCATAAATCCATTTAGGACGTTTCCTGCAGTAGAGTAGTTAGTTGTATTTTAGGAGTTTTTCTTGTCCAATACGTACTTTTCCTGTTTCTGAGCTTACAATTTTAACAATTTCCCCTCTCATCATATGATCATTTGATTTTGATATGCGATATTTGAGGGATGAAGATTGAATGTTTTGGCCAATATAATTGTAACCATAA

Coding sequence (CDS)

ATGTTGGAACTTCATCTTGTTCAGAATTCGCTCCTCAAGAAGGTCTTGGAGTCGATCAAAGATTTTGTGACCGATGCAAACTTCCATTATTCCGCCACTGGATGCTCGCTTCAGGCCATGGATTCGAGCCATGTTACCCTGGTGGTTCTTCTCCTTCGAGCGGAGGCCTTTGAACTATATCGCTGCGACAGAAACATTTCCGTGGGAATGAACTTGAACAACATGTCGAAAATGCTCAAGTGTGCCGGCAATGATGATGCCATTAGAATCAAGGCTGATGACGGCAATGATACTATCACTTTCGTGTTTGAAAGCCCCACCCAACGCAAGGTTTCCAATTTTGAGATGAGATTGATGGACATCGACAGCGAGCTACTTGGAATTCCAGATTTAGAGCATCATGCTATTGTTAAAATGCCTTCCGTTGAGTTCGCTAGAATTTGCAAAGATCTCAGCAACATTGGTGATACTGTTATAATCTCTGTGACGAGGGAAGATGTCACGTTCTCAACAATAGGTGATATAGGATCTGCAAACATTGTTTGCAGCCAGAACGCTGCTGTAGCCAAGCCAGAAGAAGCAACAGTTATAGAGTTAAACGAGCCAGTTTCTTTGACATTTTCTTTGAGGTATATGAATTTATTCACCAAGGCTACACCCCTATCTAATACAGTTACCATCAGCCTGGCTTCTGAGCTACCTGCCGTTGTTGAGTACAAAATAGCAGAGATGGGACATGTTAGATTTTACATGGATCCCAGTTAG

Protein sequence

MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELYRCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMDIDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANIVCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYKIAEMGHVRFYMDPS

Homology

[Close]

BLAST of Cp4.1LG05g09590 vs. ExPASy Swiss-Prot
Match: O82797 (Proliferating cell nuclear antigen OS=Nicotiana tabacum OX=4097 GN=PCNA PE=2 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.6e-108
Identity = 199/253 (78.66%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF  SATG SLQAMDSSHV LV LLLR+E FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNIS+GMNL NM+KMLKCAGNDD I +KADDG+DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61  RCDRNISMGMNLANMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIP+ E+HAIV+MPS EF+RICKDLS+IGDTV+ISVT+E V FST GDIG+ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFSRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VC QN  V KPEEATVIE+NEPVSLTF+LRY+N FTKATPLSNTVTISL+SELP VVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG++RFY+ P
Sbjct: 241 IAEMGYIRFYLAP 253

[Close]

BLAST of Cp4.1LG05g09590 vs. ExPASy Swiss-Prot
Match: P24314 (Proliferating cell nuclear antigen OS=Catharanthus roseus OX=4058 PE=2 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.6e-108
Identity = 197/253 (77.87%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLES+KD VTDANF  SA+G SLQAMDSSHV LV LLLR+E FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESLKDLVTDANFDCSASGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRN S+GMNLNNM+KMLKCAGNDD I +KADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61  RCDRNPSMGMNLNNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIP+ E+HAIV+MPS EFARICKDLS+IGDTV+ISVT+E V FST GDIG+ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VC QN  V KP+EAT+IE+NEPVSLTF+LRY+N FTKATPLSN VTISL+SELP VVEYK
Sbjct: 181 VCRQNTTVDKPDEATIIEMNEPVSLTFALRYLNSFTKATPLSNNVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG++RFY+ P
Sbjct: 241 IAEMGYIRFYLAP 253

[Close]

BLAST of Cp4.1LG05g09590 vs. ExPASy Swiss-Prot
Match: Q00268 (Proliferating cell nuclear antigen OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.1e-107
Identity = 197/253 (77.87%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLEL LVQ SLLKKV++SIKD V DANF  SATG SLQAMDSSHV LV +LLR+E FE Y
Sbjct: 1   MLELRLVQGSLLKKVMDSIKDLVNDANFDCSATGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNIS+GMNL NM+KMLKCAGNDD I IKADDG+DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61  RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIP+ E+HAIV+MPS EFARICKDLS+IGDTV+ISVT+E V FST GDIG+ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VC QN  V KPEEATVIE+NEPVSLTF+LRYMN FTKA+PLS+TVTISL+SELP VVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKASPLSSTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG++RFY+ P
Sbjct: 241 IAEMGYIRFYLAP 253

[Close]

BLAST of Cp4.1LG05g09590 vs. ExPASy Swiss-Prot
Match: O82134 (Proliferating cell nuclear antigen OS=Pisum sativum OX=3888 GN=PCNA PE=2 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 6.8e-107
Identity = 196/253 (77.47%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIK+ V DANF  S+TG SLQAMDSSHV LV LLLR+E FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKELVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRN+S+GMNLNNM+KMLKCAGNDD I IKADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61  RCDRNLSMGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIP+ E+HAIV+MPS EFARICKDLS+IGDTV+I+V++E V FST GDIGSANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVIAVSKEGVKFSTKGDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VC QN  V KPEEATVIE+NEPV+L F+LRYMN FTKATPLS++VTISL++ELP VVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVALQFALRYMNSFTKATPLSSSVTISLSNELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG+VRFY+ P
Sbjct: 241 IAEMGYVRFYLAP 253

[Close]

BLAST of Cp4.1LG05g09590 vs. ExPASy Swiss-Prot
Match: Q9MAY3 (Proliferating cell nuclear antigen OS=Populus nigra OX=3691 GN=PCNA PE=2 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.9e-105
Identity = 192/253 (75.89%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF +S++G SLQ+MDSSHV LV LLL++E FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDFSSSGFSLQSMDSSHVALVALLLKSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRN S+GMNL NMSKMLKCAGNDD I IK DDG+DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61  RCDRNTSMGMNLGNMSKMLKCAGNDDIITIKGDDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIP+ E+HAIVKMPS EFARICKDL++IGDTV+ISVT+E V FST GDIG+ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVKMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           V  QN  V KPE+ATVIE+NEPVS+TF+LRYMN FTKATPLSNTVTIS++ +LP VVEYK
Sbjct: 181 VLRQNTTVDKPEDATVIEMNEPVSMTFALRYMNSFTKATPLSNTVTISMSPDLPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG+VRFY+ P
Sbjct: 241 IAEMGYVRFYLAP 253

[Close]

BLAST of Cp4.1LG05g09590 vs. NCBI nr
Match: XP_023532278.1 (proliferating cell nuclear antigen-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493 bits (1269), Expect = 1.48e-175
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY
Sbjct: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
Sbjct: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI
Sbjct: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK
Sbjct: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240

Query: 241 IAEMGHVRFYMDPS 254
           IAEMGHVRFYMDPS
Sbjct: 241 IAEMGHVRFYMDPS 254

[Close]

BLAST of Cp4.1LG05g09590 vs. NCBI nr
Match: XP_022947842.1 (proliferating cell nuclear antigen-like [Cucurbita moschata])

HSP 1 Score: 487 bits (1253), Expect = 4.06e-173
Identity = 251/254 (98.82%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHV LVVLLLRAEAFELY
Sbjct: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNISVGMNLNNMSKML+CAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
Sbjct: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTI DIGSANI
Sbjct: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIDDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK
Sbjct: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240

Query: 241 IAEMGHVRFYMDPS 254
           IAEMGHVRFYMDPS
Sbjct: 241 IAEMGHVRFYMDPS 254

[Close]

BLAST of Cp4.1LG05g09590 vs. NCBI nr
Match: KAG6605431.1 (Proliferating cell nuclear antigen, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035380.1 Proliferating cell nuclear antigen, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 483 bits (1242), Expect = 1.93e-171
Identity = 247/254 (97.24%), Postives = 251/254 (98.82%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHV LVVLLLRAEAFELY
Sbjct: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNISVGMNLNNMSKML+CAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
Sbjct: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTI DIGSANI
Sbjct: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VCSQNAAVAKPEEATVIE+NEPVS TFSLRYMNLFTKATPLSNTVTISL+SELPA+VEYK
Sbjct: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240

Query: 241 IAEMGHVRFYMDPS 254
           IAEMGHVRFYMDPS
Sbjct: 241 IAEMGHVRFYMDPS 254

[Close]

BLAST of Cp4.1LG05g09590 vs. NCBI nr
Match: XP_023007566.1 (proliferating cell nuclear antigen-like [Cucurbita maxima])

HSP 1 Score: 482 bits (1241), Expect = 2.74e-171
Identity = 246/254 (96.85%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSH+TLVVLLLRAEAFELY
Sbjct: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHITLVVLLLRAEAFELY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNISVGMNLNNMSKML+CAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
Sbjct: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIPDLEHHAIVKMPSVEFARICKDLS+IGDTVIISVTREDVTFSTI DIGSANI
Sbjct: 121 IDSEQLGIPDLEHHAIVKMPSVEFARICKDLSSIGDTVIISVTREDVTFSTISDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VCSQNAAVAKPEEATVIE+NEPVSLTFSLRYMNLFTKATPLSNTVTISL+SELPA+VEYK
Sbjct: 181 VCSQNAAVAKPEEATVIEINEPVSLTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240

Query: 241 IAEMGHVRFYMDPS 254
           IAEMGHVRFYMDPS
Sbjct: 241 IAEMGHVRFYMDPS 254

[Close]

BLAST of Cp4.1LG05g09590 vs. NCBI nr
Match: XP_022148313.1 (proliferating cell nuclear antigen [Momordica charantia])

HSP 1 Score: 408 bits (1048), Expect = 1.08e-141
Identity = 210/254 (82.68%), Postives = 227/254 (89.37%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF  SATG SLQAMDSSHV LV LLLRAE FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRAEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNIS+GMNLNNMSKMLKCAGNDD I IKADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61  RCDRNISMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIPD E+HAIV+MPSVEFARICKDLS+IGDTV+ISVT+E V FST GDIGSANI
Sbjct: 121 IDSEHLGIPDAEYHAIVRMPSVEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VC QN  V KPEEATVIE+NEPVSLTF+LRYMN FTKATPLSNTVTISL+SELP VVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDPS 254
           IAEMG+VRFY+ P 
Sbjct: 241 IAEMGYVRFYLAPK 254

[Close]

BLAST of Cp4.1LG05g09590 vs. ExPASy TrEMBL
Match: A0A6J1G7J1 (Proliferating cell nuclear antigen OS=Cucurbita moschata OX=3662 GN=LOC111451602 PE=3 SV=1)

HSP 1 Score: 487 bits (1253), Expect = 1.97e-173
Identity = 251/254 (98.82%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHV LVVLLLRAEAFELY
Sbjct: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNISVGMNLNNMSKML+CAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
Sbjct: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTI DIGSANI
Sbjct: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIDDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK
Sbjct: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240

Query: 241 IAEMGHVRFYMDPS 254
           IAEMGHVRFYMDPS
Sbjct: 241 IAEMGHVRFYMDPS 254

[Close]

BLAST of Cp4.1LG05g09590 vs. ExPASy TrEMBL
Match: A0A6J1L0X1 (Proliferating cell nuclear antigen OS=Cucurbita maxima OX=3661 GN=LOC111500022 PE=3 SV=1)

HSP 1 Score: 482 bits (1241), Expect = 1.33e-171
Identity = 246/254 (96.85%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSH+TLVVLLLRAEAFELY
Sbjct: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHITLVVLLLRAEAFELY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNISVGMNLNNMSKML+CAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
Sbjct: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIPDLEHHAIVKMPSVEFARICKDLS+IGDTVIISVTREDVTFSTI DIGSANI
Sbjct: 121 IDSEQLGIPDLEHHAIVKMPSVEFARICKDLSSIGDTVIISVTREDVTFSTISDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VCSQNAAVAKPEEATVIE+NEPVSLTFSLRYMNLFTKATPLSNTVTISL+SELPA+VEYK
Sbjct: 181 VCSQNAAVAKPEEATVIEINEPVSLTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240

Query: 241 IAEMGHVRFYMDPS 254
           IAEMGHVRFYMDPS
Sbjct: 241 IAEMGHVRFYMDPS 254

[Close]

BLAST of Cp4.1LG05g09590 vs. ExPASy TrEMBL
Match: A0A6J1D3S3 (Proliferating cell nuclear antigen OS=Momordica charantia OX=3673 GN=LOC111016996 PE=3 SV=1)

HSP 1 Score: 408 bits (1048), Expect = 5.23e-142
Identity = 210/254 (82.68%), Postives = 227/254 (89.37%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF  SATG SLQAMDSSHV LV LLLRAE FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRAEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNIS+GMNLNNMSKMLKCAGNDD I IKADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61  RCDRNISMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIPD E+HAIV+MPSVEFARICKDLS+IGDTV+ISVT+E V FST GDIGSANI
Sbjct: 121 IDSEHLGIPDAEYHAIVRMPSVEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VC QN  V KPEEATVIE+NEPVSLTF+LRYMN FTKATPLSNTVTISL+SELP VVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDPS 254
           IAEMG+VRFY+ P 
Sbjct: 241 IAEMGYVRFYLAPK 254

[Close]

BLAST of Cp4.1LG05g09590 vs. ExPASy TrEMBL
Match: A0A5A7V7Z1 (Proliferating cell nuclear antigen OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00380 PE=3 SV=1)

HSP 1 Score: 407 bits (1045), Expect = 1.50e-141
Identity = 209/254 (82.28%), Postives = 227/254 (89.37%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF  SATG SLQAMDSSHV LV LLLRAE FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRAEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNIS+GMNLNNMSKMLKCAGNDD I IKADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61  RCDRNISMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIPD E+HAIV+MPSVEFARICKDLS+IGDTV+ISVT+E V FST GDIGSANI
Sbjct: 121 IDSEHLGIPDAEYHAIVRMPSVEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VC QN  V KPEEATVIE+NEPVSLTF+LRYMN FTKATPLSNTVTISL+S+LP VVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYK 240

Query: 241 IAEMGHVRFYMDPS 254
           IAEMG+VRFY+ P 
Sbjct: 241 IAEMGYVRFYLAPK 254

[Close]

BLAST of Cp4.1LG05g09590 vs. ExPASy TrEMBL
Match: A0A0A0KE56 (Proliferating cell nuclear antigen OS=Cucumis sativus OX=3659 GN=Csa_6G188070 PE=3 SV=1)

HSP 1 Score: 407 bits (1045), Expect = 1.50e-141
Identity = 209/254 (82.28%), Postives = 227/254 (89.37%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF  SATG SLQAMDSSHV LV LLLRAE FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRAEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNIS+GMNLNNMSKMLKCAGNDD I IKADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61  RCDRNISMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIPD E+HAIV+MPSVEFARICKDLS+IGDTV+ISVT+E V FST GDIGSANI
Sbjct: 121 IDSEHLGIPDAEYHAIVRMPSVEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           VC QN  V KPEEATVIE+NEPVSLTF+LRYMN FTKATPLSNTVTISL+S+LP VVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYK 240

Query: 241 IAEMGHVRFYMDPS 254
           IAEMG+VRFY+ P 
Sbjct: 241 IAEMGYVRFYLAPK 254

[Close]

BLAST of Cp4.1LG05g09590 vs. TAIR 10
Match: AT2G29570.1 (proliferating cell nuclear antigen 2 )

HSP 1 Score: 380.2 bits (975), Expect = 1.3e-105
Identity = 191/253 (75.49%), Postives = 221/253 (87.35%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLE++KD V DANF  S TG SLQAMDSSHV LV LLLR+E FE Y
Sbjct: 1   MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRN+S+GMNL NMSKMLKCAGNDD I IKADDG+DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIPD E+H+IV+MPS EF+RICKDLS+IGDTV+ISVT+E V FST GDIG+ANI
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           V  QN  V KPE+A VIE+NEPVSL+F+LRYMN FTKATPLS TVTISL+SELP VVEYK
Sbjct: 181 VLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSETVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           +AEMG++R+Y+ P
Sbjct: 241 VAEMGYIRYYLAP 253

[Close]

BLAST of Cp4.1LG05g09590 vs. TAIR 10
Match: AT1G07370.1 (proliferating cellular nuclear antigen 1 )

HSP 1 Score: 379.8 bits (974), Expect = 1.7e-105
Identity = 192/253 (75.89%), Postives = 221/253 (87.35%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF  S+TG SLQAMDSSHV LV LLLR+E FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRN+S+GMNL NMSKMLKCAGNDD I IKADDG DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180
           IDSE LGIPD E+H+IV+MPS EF+RICKDLS+IGDTV+ISVT+E V FST GDIG+ANI
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSNEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180

Query: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240
           V  QN  V KPE+A VIE+ EPVSL+F+LRYMN FTKATPLS+TVTISL+SELP VVEYK
Sbjct: 181 VLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           +AEMG++R+Y+ P
Sbjct: 241 VAEMGYIRYYLAP 253

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g09590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82797	1.6e-108	78.66	Proliferating cell nuclear antigen OS=Nicotiana tabacum OX=4097 GN=PCNA PE=2 SV=...	[more]
P24314	3.6e-108	77.87	Proliferating cell nuclear antigen OS=Catharanthus roseus OX=4058 PE=2 SV=1	[more]
Q00268	1.1e-107	77.87	Proliferating cell nuclear antigen OS=Daucus carota OX=4039 PE=3 SV=1	[more]
O82134	6.8e-107	77.47	Proliferating cell nuclear antigen OS=Pisum sativum OX=3888 GN=PCNA PE=2 SV=1	[more]
Q9MAY3	2.9e-105	75.89	Proliferating cell nuclear antigen OS=Populus nigra OX=3691 GN=PCNA PE=2 SV=1	[more]

BLAST of Cp4.1LG05g09590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532278.1	1.48e-175	100.00	proliferating cell nuclear antigen-like [Cucurbita pepo subsp. pepo]	[more]
XP_022947842.1	4.06e-173	98.82	proliferating cell nuclear antigen-like [Cucurbita moschata]	[more]
KAG6605431.1	1.93e-171	97.24	Proliferating cell nuclear antigen, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023007566.1	2.74e-171	96.85	proliferating cell nuclear antigen-like [Cucurbita maxima]	[more]
XP_022148313.1	1.08e-141	82.68	proliferating cell nuclear antigen [Momordica charantia]	[more]

BLAST of Cp4.1LG05g09590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7J1	1.97e-173	98.82	Proliferating cell nuclear antigen OS=Cucurbita moschata OX=3662 GN=LOC111451602...	[more]
A0A6J1L0X1	1.33e-171	96.85	Proliferating cell nuclear antigen OS=Cucurbita maxima OX=3661 GN=LOC111500022 P...	[more]
A0A6J1D3S3	5.23e-142	82.68	Proliferating cell nuclear antigen OS=Momordica charantia OX=3673 GN=LOC11101699...	[more]
A0A5A7V7Z1	1.50e-141	82.28	Proliferating cell nuclear antigen OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0KE56	1.50e-141	82.28	Proliferating cell nuclear antigen OS=Cucumis sativus OX=3659 GN=Csa_6G188070 PE...	[more]

BLAST of Cp4.1LG05g09590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29570.1	1.3e-105	75.49	proliferating cell nuclear antigen 2	[more]
AT1G07370.1	1.7e-105	75.89	proliferating cellular nuclear antigen 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000730	Proliferating cell nuclear antigen, PCNA	PRINTS	PR00339	PCNACYCLIN	coord: 34..52 score: 73.18 coord: 203..217 score: 69.21 coord: 110..132 score: 62.53 coord: 56..80 score: 64.76 coord: 10..29 score: 62.38 coord: 241..254 score: 38.36
IPR000730	Proliferating cell nuclear antigen, PCNA	TIGRFAM	TIGR00590	TIGR00590	coord: 1..253 e-value: 1.5E-108 score: 360.2
IPR000730	Proliferating cell nuclear antigen, PCNA	HAMAP	MF_00317	DNApol_clamp_arch	coord: 2..254 score: 17.549778
None	No IPR available	GENE3D	3.70.10.10		coord: 1..254 e-value: 3.3E-102 score: 343.2
None	No IPR available	PANTHER	PTHR11352	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 1..253
None	No IPR available	PANTHER	PTHR11352:SF8	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 1..253
None	No IPR available	CDD	cd00577	PCNA	coord: 6..253 e-value: 7.79372E-87 score: 256.402
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 127..253
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 1..125
IPR022649	Proliferating cell nuclear antigen, PCNA, C-terminal	PFAM	PF02747	PCNA_C	coord: 127..253 e-value: 3.1E-53 score: 179.3
IPR022648	Proliferating cell nuclear antigen, PCNA, N-terminal	PFAM	PF00705	PCNA_N	coord: 1..123 e-value: 1.7E-49 score: 166.7
IPR022659	Proliferating cell nuclear antigen, PCNA, conserved site	PROSITE	PS00293	PCNA_2	coord: 61..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g09590.1	Cp4.1LG05g09590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006272	leading strand elongation
biological_process	GO:0006298	mismatch repair
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0006275	regulation of DNA replication
biological_process	GO:0019985	translesion synthesis
cellular_component	GO:0043626	PCNA complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0030337	DNA polymerase processivity factor activity