Cp4.1LG05g09030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g09030
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor MYB59-like isoform X1
Location	Cp4.1LG05: 5938327 .. 5939262 (-)
RNA-Seq Expression	Cp4.1LG05g09030
Synteny	Cp4.1LG05g09030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGGGACAGGGAATCAGAAAGGGTCCATGGACAGAGCAAGAGGACATCCAACTGATTTGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCCAAAGTTTCAGGTTTGAAGGTGGCGGGAGACAGTTCCTAGGTAGGCTAAACTCATGATTTGTTGTTGTTGTGAAAGCCTCTGTTTTAACACCTCTTTGGGGATTTGGGATTTGGGATTTGGGTTTGGATTTGTAGGACTTAACAGAACAGGCAAAAGTTGCAGGCTGAGATGGGTTAATTACCTTCATCCTGGTCTCAAAAGAGGCAAGATGAGTACTCAAGAAGAACGACTCGTGCTTGAACTTCACGCCAAATGGGGAAACAGGTCTCTAAAACACCATACCCTTTCACTCCCCTTCCTTATTCTTTATCTCTTAACACTTTTGTTCATTTCAGATGGTCCAAGATTGCTCGCAAATTACCAGGCCGCACAGATAACGAAATCAAGAACTACTGGAGAACCCATATGAGGAAGAAGGCACAGGAGAAGAGAAGGGCTTTGTGTTCTTCATCTTCCTCCTCCTCCTCTTCTTCTTGTTCTTCTTCTTCTGGACCAGTGAAGTTCTTTGACTCAGGGGGGTCTGAAATCTCGGCTTCATCATCAAACAAGAAGAAGGGGGAGGAAAATCAAGGAGTGGGTGACCCAAATGGATACTCAATGGATGATATATGGAAAGATATTGATATGTGTGATGATCATGAGGGGTTGATTATAAACCAAGACTGCAACTATTCTTGCCCTGCTTTGAATCCTCCTTCATGGGAGTATTACTGTGGGGATTCTTCGTGGAAGATGGAGGAGGAAGAGAGTAAGCTAATTTTCTCTGGGTATGATGATCATAACGGGAGGCCACGCCTTGCTCAAGCTAATCAGAATTTTTTCTATTGA

mRNA sequence

ATGGAAGAGGGACAGGGAATCAGAAAGGGTCCATGGACAGAGCAAGAGGACATCCAACTGATTTGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCCAAAGTTTCAGGGGGGTCTGAAATCTCGGCTTCATCATCAAACAAGAAGAAGGGGGAGGAAAATCAAGGAGTGGGTGACCCAAATGGATACTCAATGGATGATATATGGAAAGATATTGATATGTGTGATGATCATGAGGGGTTGATTATAAACCAAGACTGCAACTATTCTTGCCCTGCTTTGAATCCTCCTTCATGGGAGTATTACTGTGGGGATTCTTCGTGGAAGATGGAGGAGGAAGAGAGTAAGCTAATTTTCTCTGGGTATGATGATCATAACGGGAGGCCACGCCTTGCTCAAGCTAATCAGAATTTTTTCTATTGA

Coding sequence (CDS)

ATGGAAGAGGGACAGGGAATCAGAAAGGGTCCATGGACAGAGCAAGAGGACATCCAACTGATTTGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCCAAAGTTTCAGGGGGGTCTGAAATCTCGGCTTCATCATCAAACAAGAAGAAGGGGGAGGAAAATCAAGGAGTGGGTGACCCAAATGGATACTCAATGGATGATATATGGAAAGATATTGATATGTGTGATGATCATGAGGGGTTGATTATAAACCAAGACTGCAACTATTCTTGCCCTGCTTTGAATCCTCCTTCATGGGAGTATTACTGTGGGGATTCTTCGTGGAAGATGGAGGAGGAAGAGAGTAAGCTAATTTTCTCTGGGTATGATGATCATAACGGGAGGCCACGCCTTGCTCAAGCTAATCAGAATTTTTTCTATTGA

Protein sequence

MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGGSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDMCDDHEGLIINQDCNYSCPALNPPSWEYYCGDSSWKMEEEESKLIFSGYDDHNGRPRLAQANQNFFY

Homology

[Close]

BLAST of Cp4.1LG05g09030 vs. ExPASy Swiss-Prot
Match: Q53NK6 (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-11
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 7  IRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG 41
          +RKGPWTEQED+QL+C V LFGDRRWDF+AKVSG
Sbjct: 8  MRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSG 41

[Close]

BLAST of Cp4.1LG05g09030 vs. ExPASy Swiss-Prot
Match: Q4JL76 (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-11
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 7  IRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG 41
          IRKGPWTEQED+QL+C V LFG+RRWDFIAKVSG
Sbjct: 8  IRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSG 41

[Close]

BLAST of Cp4.1LG05g09030 vs. ExPASy Swiss-Prot
Match: Q9LX82 (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.0e-11
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0


Query: 1  MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG 41
          M + +G RKGPWTEQEDI L+ FV LFGDRRWDFIAKVSG
Sbjct: 1  MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSG 40

[Close]

BLAST of Cp4.1LG05g09030 vs. ExPASy Swiss-Prot
Match: Q4JL84 (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 3.3e-10
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 8  RKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG 41
          RKGPWTEQEDI L+ FV LFGDRRWDF+AKVSG
Sbjct: 9  RKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSG 41

[Close]

BLAST of Cp4.1LG05g09030 vs. ExPASy Swiss-Prot
Match: Q9SCP1 (Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 9.4e-05
Identity = 18/34 (52.94%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 7  IRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG 41
          +R+GPW E+ED +L+  + L G+RRWD +A VSG
Sbjct: 9  LRRGPWLEEEDERLVKVISLLGERRWDSLAIVSG 42

[Close]

BLAST of Cp4.1LG05g09030 vs. NCBI nr
Match: XP_023532282.1 (transcription factor MYB59-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269 bits (687), Expect = 5.63e-89
Identity = 143/246 (58.13%), Postives = 143/246 (58.13%), Query Frame = 0


Query: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------------------- 60
           MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG                    
Sbjct: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  KRGKMSTQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALCS 120

Query: 121 -----------------------GSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDM 143
                                  GSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDM
Sbjct: 121 SSSSSSSSSCSSSSGPVKFFDSGGSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDM 180

[Close]

BLAST of Cp4.1LG05g09030 vs. NCBI nr
Match: XP_022947851.1 (transcription factor MYB59-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 266 bits (681), Expect = 4.61e-88
Identity = 142/246 (57.72%), Postives = 142/246 (57.72%), Query Frame = 0


Query: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------------------- 60
           MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG                    
Sbjct: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  KRGKMSTQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALCS 120

Query: 121 -----------------------GSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDM 143
                                  GSEISASSS KKKGEENQGVGDPNGYSMDDIWKDIDM
Sbjct: 121 SSSSSSSSSCSSSSGPVKFFDSGGSEISASSSTKKKGEENQGVGDPNGYSMDDIWKDIDM 180

[Close]

BLAST of Cp4.1LG05g09030 vs. NCBI nr
Match: KAG6605484.1 (Transcription factor MYB48, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035425.1 Transcription factor MYB48, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264 bits (674), Expect = 5.53e-87
Identity = 141/247 (57.09%), Postives = 141/247 (57.09%), Query Frame = 0


Query: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------------------- 60
           MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG                    
Sbjct: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  KRGKMSTQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALCS 120

Query: 121 ------------------------GSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDID 143
                                   GSEISASSS KKKGEENQGVGDPNGYSMDDIWKDID
Sbjct: 121 SSSSSSSSSSCSSSSGPVKFFDSGGSEISASSSTKKKGEENQGVGDPNGYSMDDIWKDID 180

[Close]

BLAST of Cp4.1LG05g09030 vs. NCBI nr
Match: XP_023007024.1 (transcription factor MYB59-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 263 bits (671), Expect = 1.53e-86
Identity = 141/246 (57.32%), Postives = 141/246 (57.32%), Query Frame = 0


Query: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------------------- 60
           MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG                    
Sbjct: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  KRGKMSTQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALCS 120

Query: 121 -----------------------GSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDM 143
                                  GSEISASSS KKKGEENQGVGDPNGYSMDDIWKDIDM
Sbjct: 121 SSSSSSSSSCSSSSGPVKFFDSGGSEISASSSTKKKGEENQGVGDPNGYSMDDIWKDIDM 180

[Close]

BLAST of Cp4.1LG05g09030 vs. NCBI nr
Match: XP_023532283.1 (transcription factor MYB59-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231 bits (588), Expect = 6.15e-74
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 39  SGGSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDMCDDHEGLIINQDCNYSCPALN 98
           SGGSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDMCDDHEGLIINQDCNYSCPALN
Sbjct: 141 SGGSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDMCDDHEGLIINQDCNYSCPALN 200

Query: 99  PPSWEYYCGDSSWKMEEEESKLIFSGYDDHNGRPRLAQANQNFFY 143
           PPSWEYYCGDSSWKMEEEESKLIFSGYDDHNGRPRLAQANQNFFY
Sbjct: 201 PPSWEYYCGDSSWKMEEEESKLIFSGYDDHNGRPRLAQANQNFFY 245

[Close]

BLAST of Cp4.1LG05g09030 vs. ExPASy TrEMBL
Match: A0A6J1G7M1 (transcription factor MYB59-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451610 PE=4 SV=1)

HSP 1 Score: 266 bits (681), Expect = 2.23e-88
Identity = 142/246 (57.72%), Postives = 142/246 (57.72%), Query Frame = 0


Query: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------------------- 60
           MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG                    
Sbjct: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  KRGKMSTQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALCS 120

Query: 121 -----------------------GSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDM 143
                                  GSEISASSS KKKGEENQGVGDPNGYSMDDIWKDIDM
Sbjct: 121 SSSSSSSSSCSSSSGPVKFFDSGGSEISASSSTKKKGEENQGVGDPNGYSMDDIWKDIDM 180

[Close]

BLAST of Cp4.1LG05g09030 vs. ExPASy TrEMBL
Match: A0A6J1L3T5 (transcription factor MYB59-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499641 PE=4 SV=1)

HSP 1 Score: 263 bits (671), Expect = 7.41e-87
Identity = 141/246 (57.32%), Postives = 141/246 (57.32%), Query Frame = 0


Query: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------------------- 60
           MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG                    
Sbjct: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  KRGKMSTQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALCS 120

Query: 121 -----------------------GSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDM 143
                                  GSEISASSS KKKGEENQGVGDPNGYSMDDIWKDIDM
Sbjct: 121 SSSSSSSSSCSSSSGPVKFFDSGGSEISASSSTKKKGEENQGVGDPNGYSMDDIWKDIDM 180

[Close]

BLAST of Cp4.1LG05g09030 vs. ExPASy TrEMBL
Match: A0A6J1G7J9 (transcription factor MYB59-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451610 PE=4 SV=1)

HSP 1 Score: 228 bits (582), Expect = 2.43e-73
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 39  SGGSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDMCDDHEGLIINQDCNYSCPALN 98
           SGGSEISASSS KKKGEENQGVGDPNGYSMDDIWKDIDMCDDHEGLIINQDCNYSCPALN
Sbjct: 141 SGGSEISASSSTKKKGEENQGVGDPNGYSMDDIWKDIDMCDDHEGLIINQDCNYSCPALN 200

Query: 99  PPSWEYYCGDSSWKMEEEESKLIFSGYDDHNGRPRLAQANQNFFY 143
           PPSWEYYCGDSSWKMEEEESKLIFSGYDDHNGRPRLAQANQNFFY
Sbjct: 201 PPSWEYYCGDSSWKMEEEESKLIFSGYDDHNGRPRLAQANQNFFY 245

[Close]

BLAST of Cp4.1LG05g09030 vs. ExPASy TrEMBL
Match: A0A6J1L1U3 (transcription factor MYB59-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499641 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 8.02e-72
Identity = 103/105 (98.10%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 39  SGGSEISASSSNKKKGEENQGVGDPNGYSMDDIWKDIDMCDDHEGLIINQDCNYSCPALN 98
           SGGSEISASSS KKKGEENQGVGDPNGYSMDDIWKDIDMCDDHEGLIINQD NYSCPALN
Sbjct: 141 SGGSEISASSSTKKKGEENQGVGDPNGYSMDDIWKDIDMCDDHEGLIINQDSNYSCPALN 200

Query: 99  PPSWEYYCGDSSWKMEEEESKLIFSGYDDHNGRPRLAQANQNFFY 143
           PPSWEYYCGDSSWKMEEEESKLIFSGYDDHNGRPRLAQANQNFFY
Sbjct: 201 PPSWEYYCGDSSWKMEEEESKLIFSGYDDHNGRPRLAQANQNFFY 245

[Close]

BLAST of Cp4.1LG05g09030 vs. ExPASy TrEMBL
Match: A0A6J1D2K9 (transcription factor MYB59 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017001 PE=4 SV=1)

HSP 1 Score: 190 bits (482), Expect = 6.38e-58
Identity = 118/266 (44.36%), Postives = 127/266 (47.74%), Query Frame = 0


Query: 1   MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------------------- 60
           M EGQ IRKGPWTEQEDIQLIC+VGLFGDRRWD IAKVSG                    
Sbjct: 1   MVEGQEIRKGPWTEQEDIQLICYVGLFGDRRWDSIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  KRGKMSSQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKRRALSA 120

Query: 121 ------------------------------------GSEISASSSNKKKGEENQGVGDPN 143
                                               GSE++A S+ KKK EENQ  GDPN
Sbjct: 121 SLSSSSSSSSSSSNNSAVEFPADTGPVKFFDSGGSEGSEVTALSTTKKKMEENQEQGDPN 180

[Close]

BLAST of Cp4.1LG05g09030 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-12
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0


Query: 1  MEEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG 41
          M + +G RKGPWTEQEDI L+ FV LFGDRRWDFIAKVSG
Sbjct: 1  MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSG 40

[Close]

BLAST of Cp4.1LG05g09030 vs. TAIR 10
Match: AT5G59780.3 (myb domain protein 59 )

HSP 1 Score: 66.2 bits (160), Expect = 2.4e-11
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 8  RKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG 41
          RKGPWTEQEDI L+ FV LFGDRRWDF+AKVSG
Sbjct: 9  RKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSG 41

[Close]

BLAST of Cp4.1LG05g09030 vs. TAIR 10
Match: AT2G47190.1 (myb domain protein 2 )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 0


Query: 2  EEGQGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG 41
          EE   +RKGPWTE+ED  L+ FV + GD RW+ IA+ SG
Sbjct: 15 EEDSDVRKGPWTEEEDAILVNFVSIHGDARWNHIARSSG 53

[Close]

BLAST of Cp4.1LG05g09030 vs. TAIR 10
Match: AT3G53200.1 (myb domain protein 27 )

HSP 1 Score: 48.1 bits (113), Expect = 6.7e-06
Identity = 18/34 (52.94%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 7  IRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG 41
          +R+GPW E+ED +L+  + L G+RRWD +A VSG
Sbjct: 9  LRRGPWLEEEDERLVKVISLLGERRWDSLAIVSG 42

[Close]

BLAST of Cp4.1LG05g09030 vs. TAIR 10
Match: AT3G24310.1 (myb domain protein 305 )

HSP 1 Score: 45.8 bits (107), Expect = 3.3e-05
Identity = 18/36 (50.00%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 5  QGIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG 41
          +G RKGPWT +ED  LI +V L G+ RW+ +A+++G
Sbjct: 16 EGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAG 51

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g09030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q53NK6	2.3e-11	82.35	Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE...	[more]
Q4JL76	2.3e-11	85.29	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE...	[more]
Q9LX82	3.0e-11	77.50	Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1	[more]
Q4JL84	3.3e-10	84.85	Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2	[more]
Q9SCP1	9.4e-05	52.94	Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1	[more]

BLAST of Cp4.1LG05g09030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532282.1	5.63e-89	58.13	transcription factor MYB59-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022947851.1	4.61e-88	57.72	transcription factor MYB59-like isoform X1 [Cucurbita moschata]	[more]
KAG6605484.1	5.53e-87	57.09	Transcription factor MYB48, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_023007024.1	1.53e-86	57.32	transcription factor MYB59-like isoform X1 [Cucurbita maxima]	[more]
XP_023532283.1	6.15e-74	100.00	transcription factor MYB59-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG05g09030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7M1	2.23e-88	57.72	transcription factor MYB59-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1L3T5	7.41e-87	57.32	transcription factor MYB59-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1G7J9	2.43e-73	99.05	transcription factor MYB59-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1L1U3	8.02e-72	98.10	transcription factor MYB59-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1D2K9	6.38e-58	44.36	transcription factor MYB59 isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of Cp4.1LG05g09030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46130.1	2.1e-12	77.50	myb domain protein 48	[more]
AT5G59780.3	2.4e-11	84.85	myb domain protein 59	[more]
AT2G47190.1	1.2e-07	56.41	myb domain protein 2	[more]
AT3G53200.1	6.7e-06	52.94	myb domain protein 27	[more]
AT3G24310.1	3.3e-05	50.00	myb domain protein 305	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 9..40 e-value: 1.0E-6 score: 28.8
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 4..41 score: 12.42961
None	No IPR available	GENE3D	1.10.10.60		coord: 2..53 e-value: 2.1E-6 score: 29.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..68
None	No IPR available	PANTHER	PTHR45675:SF7	TRANSCRIPTION FACTOR MYB48-RELATED	coord: 6..40 coord: 54..121
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 6..40 coord: 54..121
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 4..37 score: 6.492739
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 11..41 e-value: 3.01024E-6 score: 39.8662
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 5..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g09030.1	Cp4.1LG05g09030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding