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Cp4.1LG05g08770 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCGTCTGCATATCGAACTGCATCAACGACGCTCGAGTCCCCGTCCGTCCGACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATCCGTCAGTTCCAAACTGAATCGAACATCGCGCGTCGTCGACAGCATCTCTTGCCGGCAGATGTATCTCAGAAGTTACACGTTCTCCAGAGAAGAGGATAACGTGGCGGAGAAGACGAACAAGTGCTTCGGCAAAGTCGGAATGCGACAGAAAGTTTCTCGCCGGAGAAATAAGAAGAAGAAGAAGAAGGCCATGGCGGAGGAGGAGGACGAGTCTGAGAAGATCAGGAAGTGTTCGACGCTGAAGAAGGCGAAGGAGTTATCGTGCGCCGCTTTGACGTCCGTCTTCCGGCGGTTGCTATCGTGTACCGCTAAAGTCGACGTGGCCGATAATGCCAGAGAGATCCATTAG ATGGCCTCCGTCTGCATATCGAACTGCATCAACGACGCTCGAGTCCCCGTCCGTCCGACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATCCGTCAGTTCCAAACTGAATCGAACATCGCGCGTCGTCGACAGCATCTCTTGCCGGCAGATGTATCTCAGAAGTTACACGTTCTCCAGAGAAGAGGATAACGTGGCGGAGAAGACGAACAAGTGCTTCGGCAAAGTCGGAATGCGACAGAAAGTTTCTCGCCGGAGAAATAAGAAGAAGAAGAAGAAGGCCATGGCGGAGGAGGAGGACGAGTCTGAGAAGATCAGGAAGTGTTCGACGCTGAAGAAGGCGAAGGAGTTATCGTGCGCCGCTTTGACGTCCGTCTTCCGGCGGTTGCTATCGTGTACCGCTAAAGTCGACGTGGCCGATAATGCCAGAGAGATCCATTAG ATGGCCTCCGTCTGCATATCGAACTGCATCAACGACGCTCGAGTCCCCGTCCGTCCGACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATCCGTCAGTTCCAAACTGAATCGAACATCGCGCGTCGTCGACAGCATCTCTTGCCGGCAGATGTATCTCAGAAGTTACACGTTCTCCAGAGAAGAGGATAACGTGGCGGAGAAGACGAACAAGTGCTTCGGCAAAGTCGGAATGCGACAGAAAGTTTCTCGCCGGAGAAATAAGAAGAAGAAGAAGAAGGCCATGGCGGAGGAGGAGGACGAGTCTGAGAAGATCAGGAAGTGTTCGACGCTGAAGAAGGCGAAGGAGTTATCGTGCGCCGCTTTGACGTCCGTCTTCCGGCGGTTGCTATCGTGTACCGCTAAAGTCGACGTGGCCGATAATGCCAGAGAGATCCATTAG MASVCISNCINDARVPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQMYLRSYTFSREEDNVAEKTNKCFGKVGMRQKVSRRRNKKKKKKAMAEEEDESEKIRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNAREIH Homology
BLAST of Cp4.1LG05g08770 vs. NCBI nr
Match: XP_023532318.1 (uncharacterized protein LOC111794509 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 291 bits (746), Expect = 3.40e-99 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g08770 vs. NCBI nr
Match: KAG6605498.1 (hypothetical protein SDJN03_02815, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035437.1 hypothetical protein SDJN02_02233, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 285 bits (728), Expect = 1.96e-96 Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 0
BLAST of Cp4.1LG05g08770 vs. NCBI nr
Match: XP_022946966.1 (uncharacterized protein LOC111450987 [Cucurbita moschata]) HSP 1 Score: 280 bits (715), Expect = 1.82e-94 Identity = 145/152 (95.39%), Postives = 147/152 (96.71%), Query Frame = 0
BLAST of Cp4.1LG05g08770 vs. NCBI nr
Match: XP_023006939.1 (uncharacterized protein LOC111499579 [Cucurbita maxima]) HSP 1 Score: 277 bits (708), Expect = 2.19e-93 Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0
BLAST of Cp4.1LG05g08770 vs. NCBI nr
Match: XP_004148240.1 (uncharacterized protein LOC101218723 [Cucumis sativus]) HSP 1 Score: 239 bits (610), Expect = 1.72e-78 Identity = 128/153 (83.66%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of Cp4.1LG05g08770 vs. ExPASy TrEMBL
Match: A0A6J1G522 (uncharacterized protein LOC111450987 OS=Cucurbita moschata OX=3662 GN=LOC111450987 PE=4 SV=1) HSP 1 Score: 280 bits (715), Expect = 8.79e-95 Identity = 145/152 (95.39%), Postives = 147/152 (96.71%), Query Frame = 0
BLAST of Cp4.1LG05g08770 vs. ExPASy TrEMBL
Match: A0A6J1L3K0 (uncharacterized protein LOC111499579 OS=Cucurbita maxima OX=3661 GN=LOC111499579 PE=4 SV=1) HSP 1 Score: 277 bits (708), Expect = 1.06e-93 Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0
BLAST of Cp4.1LG05g08770 vs. ExPASy TrEMBL
Match: A0A0A0KET2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G302120 PE=4 SV=1) HSP 1 Score: 239 bits (610), Expect = 8.33e-79 Identity = 128/153 (83.66%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of Cp4.1LG05g08770 vs. ExPASy TrEMBL
Match: A0A5A7SXD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00590 PE=4 SV=1) HSP 1 Score: 236 bits (602), Expect = 1.47e-77 Identity = 130/154 (84.42%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of Cp4.1LG05g08770 vs. ExPASy TrEMBL
Match: A0A1S3CKF0 (uncharacterized protein LOC103501967 OS=Cucumis melo OX=3656 GN=LOC103501967 PE=4 SV=1) HSP 1 Score: 232 bits (591), Expect = 1.19e-75 Identity = 129/152 (84.87%), Postives = 134/152 (88.16%), Query Frame = 0
BLAST of Cp4.1LG05g08770 vs. TAIR 10
Match: AT5G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 119.0 bits (297), Expect = 3.3e-27 Identity = 82/160 (51.25%), Postives = 103/160 (64.38%), Query Frame = 0
BLAST of Cp4.1LG05g08770 vs. TAIR 10
Match: AT3G46300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46310.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 80.5 bits (197), Expect = 1.3e-15 Identity = 68/153 (44.44%), Postives = 84/153 (54.90%), Query Frame = 0
BLAST of Cp4.1LG05g08770 vs. TAIR 10
Match: AT3G46310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 35 Blast hits to 35 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13 Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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