Cp4.1LG05g08570 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTGTGGCAAGTGTATCGCATTCCGCAAGGAAATCGATATTCCAGCGGACGTCGATATAGACAAGATCTCTGCCAAGTTCGAGAGAGGCATACTCTTAGTGAGGCAGCCCATGAAAGCCTCCACTCAAGGGAGAAGAGGAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTTGGGGGTGCTACTGCTTTTGCTTTTGTCATTGTGTATCTCAATCTTACTAAGGAATCAACATCTAGTTTATGA ATGAACTGTGGCAAGTGTATCGCATTCCGCAAGGAAATCGATATTCCAGCGGACGTCGATATAGACAAGATCTCTGCCAAGTTCGAGAGAGGCATACTCTTAGTGAGGCAGCCCATGAAAGCCTCCACTCAAGGGAGAAGAGGAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTTGGGGGTGCTACTGCTTTTGCTTTTGTCATTGTGTATCTCAATCTTACTAAGGAATCAACATCTAGTTTATGA ATGAACTGTGGCAAGTGTATCGCATTCCGCAAGGAAATCGATATTCCAGCGGACGTCGATATAGACAAGATCTCTGCCAAGTTCGAGAGAGGCATACTCTTAGTGAGGCAGCCCATGAAAGCCTCCACTCAAGGGAGAAGAGGAGAATGGTTGAGGAGAAACATGGTGAATTTGGCTCTTGGGGGTGCTACTGCTTTTGCTTTTGTCATTGTGTATCTCAATCTTACTAAGGAATCAACATCTAGTTTATGA MNCGKCIAFRKEIDIPADVDIDKISAKFERGILLVRQPMKASTQGRRGEWLRRNMVNLALGGATAFAFVIVYLNLTKESTSSL Homology
BLAST of Cp4.1LG05g08570 vs. NCBI nr
Match: XP_023533468.1 (uncharacterized protein LOC111795344 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 158 bits (399), Expect = 1.53e-47 Identity = 83/95 (87.37%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of Cp4.1LG05g08570 vs. NCBI nr
Match: KAG6590271.1 (Heat shock protein beta-11, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 117 bits (293), Expect = 1.50e-31 Identity = 63/82 (76.83%), Postives = 65/82 (79.27%), Query Frame = 0
BLAST of Cp4.1LG05g08570 vs. NCBI nr
Match: KAG7033445.1 (hypothetical protein SDJN02_07501, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 102 bits (254), Expect = 2.63e-25 Identity = 53/70 (75.71%), Postives = 56/70 (80.00%), Query Frame = 0
BLAST of Cp4.1LG05g08570 vs. NCBI nr
Match: XP_022960896.1 (inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucurbita moschata]) HSP 1 Score: 84.3 bits (207), Expect = 3.11e-18 Identity = 53/107 (49.53%), Postives = 59/107 (55.14%), Query Frame = 0
BLAST of Cp4.1LG05g08570 vs. NCBI nr
Match: KAG6590269.1 (15.7 kDa heat shock protein, peroxisomal, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 83.2 bits (204), Expect = 1.31e-17 Identity = 53/107 (49.53%), Postives = 58/107 (54.21%), Query Frame = 0
BLAST of Cp4.1LG05g08570 vs. ExPASy TrEMBL
Match: A0A6J1H8V9 (inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Cucurbita moschata OX=3662 GN=LOC111461558 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.51e-18 Identity = 53/107 (49.53%), Postives = 59/107 (55.14%), Query Frame = 0
BLAST of Cp4.1LG05g08570 vs. ExPASy TrEMBL
Match: A0A6J1H8P0 (heat shock protein beta-11-like OS=Cucurbita moschata OX=3662 GN=LOC111461559 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 3.46e-15 Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0
BLAST of Cp4.1LG05g08570 vs. ExPASy TrEMBL
Match: A0A1S3BQ02 (pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103492434 PE=3 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.42e-07 Identity = 27/39 (69.23%), Postives = 29/39 (74.36%), Query Frame = 0
BLAST of Cp4.1LG05g08570 vs. ExPASy TrEMBL
Match: A0A5A7UQF5 (Inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00910 PE=3 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.67e-07 Identity = 27/40 (67.50%), Postives = 29/40 (72.50%), Query Frame = 0
BLAST of Cp4.1LG05g08570 vs. ExPASy TrEMBL
Match: A0A5D3CDK6 (Inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00820 PE=3 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.67e-07 Identity = 27/40 (67.50%), Postives = 29/40 (72.50%), Query Frame = 0
BLAST of Cp4.1LG05g08570 vs. TAIR 10
Match: AT2G27140.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 42.0 bits (97), Expect = 2.8e-04 Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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