Cp4.1LG05g07550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g07550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Tumor necrosis factor receptor family protein
Location	Cp4.1LG05: 4660068 .. 4663518 (+)
RNA-Seq Expression	Cp4.1LG05g07550
Synteny	Cp4.1LG05g07550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGTTCGTTCGTCGTCGACTCTCTTCGAATCTAAGTGCCTTGGCGGCAGCGGGATAGCAGTGCAACAGCGCGCAGTTGTAGCCATAGACGAATAGTGGGAGAATTTTGTACCACGAAGTAGCGCGGTAGACTAGCATCAGATATGTGGTGGCTTCGCGGTATTCAAACAATTAGAAATGCAGATGGAGGTGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCGCGAGGTATTTCTCGAGGTCGCGAGCAGAGAATCTTAGGAAAATCAATCCCAAGTTGACCCCTCATGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTTGGATTAAAGCCCAGGTAGGTTTTCTTCACCTTCTGTTACATTTCATCGATTATTTTCTTTCATTTCGAAGTTGGATGATGGTTATCGAAACTGCAGCGTATGGACCGCTCAAAGTTGCTTGATCTAGGTTAGCTCTGCAGCCACATTAGTTAAAGCCTGATATTGAGTCTCAATCTGAATGGGGATATGCTTTTGATTTGAAGTGACCTATCTTTTAGATGAATGTTCATTCACTTATTGAAGAATGCTTACCAAGTCATTCGGCTGGAGCATGTAGATTACTTCATTCAAAACGCCATTAAGAAATGAATTACTAATATCTAGCTACCCAAATTAGCGACCATTTTTCAAAGCAATACTAATTATTAGTAAGGCAAATGAGAAGTTTTTGAGTATTTTTGACGAAACTCTTCTGCAACAAACAAGCTTTGTTCCCTTGAACACTTACTACCGCATGTAGTTTTATATTGAACACCCGTTTGTTGCTGTTTCCTAGAGATGCTCAGGAGGAGCAGTGGCGAGTGAAGTGGGTTAGAATGAGTAGCCCAGCGGGACCAACCATCTTGGATTGGCTCCATAAAAAATAGGTACCTTCAGCATGTGTCACTGGTACTGTCCCAAGTGTGCTTCTTGTCCTATTGACACCCCTCTGCTCACACCACCTTCCTTTACTCTCTGTAATGTATTACTTCCATTGGCACTTTTCCATAAGCCTCCTTGGTCTTCTCTTCTAGGATAGATACTTCCTATTTCCAAATTCCCTTTAGTTTCGTAATCATCTTTGTCACCATGTTAAACTCCTCCTCGATATGAACAAGTTTCATCTCAATGGTACTCTATACTCTTATGATATTCCCTTCCACGACATCTAGATCTAGTCTTGTCTTCATTTTCTTTCATTAGTAAGCATTTCCTAGAACCACACTAATCTAGCACTACTTTTGGTTAACACCTAGAAGGGTATTTTCCTTCTTGCATCAGGTATCCCAAAAGGACATCATATATGGACTCTTTTCTGCCAAGTTAATTAGTTCAAGAACACCATCAAGTACATCATGCATCCAACTTGCTAGTTTTCGTTCAATTTCTTTCTGTGCTATGTATGTATAGTAGTGGCCTATCGAAACCTTTGAAAGAGTGGAAATATTCCCTTCAATCAAATTAAAGACATTTCAATAACGTACCAAAAGGATCTTTACTGGAGCTTTGAACTTCTTGAATATGGCGAAAGCTTTAGACTTGACTTTGACAGGATAAGCCCAGGTAAATTACCAAAGTCATAAAGCAAACGAATTAAAAAACTATAGCCTTCTTTGAAAGGGATGTGTGTAGGTCCTCAGATATCAATATGCACTATTTCAAGAGGATAAGTGGTGTATGAGTGAGAGGGGGATAAGGTAGTATTGCAGTAAGTGAAAACTTCAGACTTGACTTTGTGGGGAAAGATCTAGGTAAATGTAGCTAAGTCATCAAGGAAATGAATGAAAGACTTAATAGCTTCCTCAGAAGGAGATATGAGATAAGCGCTGGCCGCCAAATATCAGTACACTCTATTTCAAGAGGATAAGTGGACGAGTGAAACGGAGGTGAGGCAGTGTATGACACTTCCCTTCTTTTGTCAGGCATGACATGAAACAGTATCTCCTTTAACTGAACAATCAAGAAACAAGGTCATGGCTTTCTTAGTTACTCTGAAAGTCGTGTCCCAATTGTAACTGTAAGTGCCGCGAGTAAATTTGGATATATTCAAAGACAAACCAACAACTAATATCAACAATAGAAGTGTAACAGCTCAAGCCCACCGGTAGTAGATATTGTCCGCTTTGTCCTGTTATGTATCGCCGTCAGCCTCACGGTTCTAAAACGTGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCCCCTCCCCAACGGACGTGGGATCTCACAATCCACCCCCCTTCGAGGCCCAGCGTCCTCGTTTGCAATTGTTCGGTGTCTGGCTCTGATACCTTTTGTAATAGTCCAAACCCACTGCTAGTAGATATTGTCCGCTTTGGCCCATTACGTATCGCCGTCAGCCTCACGGTTTTAAAACGTGTCCACTAGGGAGAGGTTTTCACATTCTTATAAGGAATGTTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCACCCCTTTTAGAGGCCCAGCATTAGAGTCAGACAGCGGTTAGTGTGCCAACGAGAGATACAAATTTCACACGAGATTGAAAAAAGTACAAAACGGATAATTAAAAAAAAAACTTAAACATGCCCCAACGTTGAACAAAGAACATAGTTGTTGTGTATAAAAAGTTCCAATAGAATTCTTACTTTTGAAATTGGATCATTGGAATATATCTTATAGAAGCCAATGATGACTTAATCCATCATGTCTGTGACATGGGAAGGCCGTAGGAATATTTATTACATATAGAAATTGTGCACCGTTCATCAGCCCTCGTGAAAAGCAGTGAATTGAATTGAATTTTATGGCCCTTCTATCTAATACTGCTTTTCATATCAGGAATCTGGCGTGGGTGGATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAAGTTGGTTCGAACAAGAAATTTCTGCTCGCCACGCCCGATGATCCTCGAGCAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACAAATAAGGAGGAGAAAGACATCAAAATAAACTTTTGCCAACGTCCATGAGTTTACGATGCAGTCGATGGACTACCCTCGGACTTGTTAGTACTGATGGCGGGCTCACGACTTATGACGATGAATTTATGAGTTTCTGCCATCACTGTTTTCCCCCAAATTTCAACTCTTTTGGGTGTTATGCAAGGTTTCTTTTGAACATTTCACGTTGACTTGGTTTCCATGCATTGACTGACAAACATGCATTTGAATCGTGGTTGATAAAAAAAGCATGGATTAGGATGTCTCATTGGATTAAACAATTTAAGTCGAATAAAAATCTTGAATTTTTAAA

mRNA sequence

TCTGTTCGTTCGTCGTCGACTCTCTTCGAATCTAAGTGCCTTGGCGGCAGCGGGATAGCAGTGCAACAGCGCGCAGTTGTAGCCATAGACGAATAGTGGGAGAATTTTGTACCACGAAGTAGCGCGGTAGACTAGCATCAGATATGTGGTGGCTTCGCGGTATTCAAACAATTAGAAATGCAGATGGAGGTGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCGCGAGGTATTTCTCGAGGTCGCGAGCAGAGAATCTTAGGAAAATCAATCCCAAGTTGACCCCTCATGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTTGGATTAAAGCCCAGGAATCTGGCGTGGGTGGATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAAGTTGGTTCGAACAAGAAATTTCTGCTCGCCACGCCCGATGATCCTCGAGCAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACAAATAAGGAGGAGAAAGACATCAAAATAAACTTTTGCCAACGTCCATGAGTTTACGATGCAGTCGATGGACTACCCTCGGACTTGTTAGTACTGATGGCGGGCTCACGACTTATGACGATGAATTTATGAGTTTCTGCCATCACTGTTTTCCCCCAAATTTCAACTCTTTTGGGTGTTATGCAAGGTTTCTTTTGAACATTTCACGTTGACTTGGTTTCCATGCATTGACTGACAAACATGCATTTGAATCGTGGTTGATAAAAAAAGCATGGATTAGGATGTCTCATTGGATTAAACAATTTAAGTCGAATAAAAATCTTGAATTTTTAAA

Coding sequence (CDS)

ATGTGGTGGCTTCGCGGTATTCAAACAATTAGAAATGCAGATGGAGGTGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCGCGAGGTATTTCTCGAGGTCGCGAGCAGAGAATCTTAGGAAAATCAATCCCAAGTTGACCCCTCATGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTTGGATTAAAGCCCAGGAATCTGGCGTGGGTGGATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAAGTTGGTTCGAACAAGAAATTTCTGCTCGCCACGCCCGATGATCCTCGAGCAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACAAATAAGGAGGAGAAAGACATCAAAATAA

Protein sequence

MWWLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK

Homology

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BLAST of Cp4.1LG05g07550 vs. NCBI nr
Match: XP_023534502.1 (uncharacterized protein LOC111796041 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310 bits (793), Expect = 3.37e-106
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDL 60
           MWWLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDL
Sbjct: 1   MWWLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDL 60

Query: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120
           YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL
Sbjct: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120

Query: 121 LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157
           LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK
Sbjct: 121 LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157

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BLAST of Cp4.1LG05g07550 vs. NCBI nr
Match: XP_022958708.1 (uncharacterized protein LOC111459852 [Cucurbita moschata])

HSP 1 Score: 294 bits (753), Expect = 3.96e-100
Identity = 152/157 (96.82%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDL 60
           MWWLRGIQTIRNADGGGG  SAGLVFSTF RYFSRSRAENLRKINPKLTP EASLVAQDL
Sbjct: 1   MWWLRGIQTIRNADGGGG--SAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDL 60

Query: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120
           YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL
Sbjct: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120

Query: 121 LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157
           LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRK SK
Sbjct: 121 LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK 155

[Close]

BLAST of Cp4.1LG05g07550 vs. NCBI nr
Match: KAG7035535.1 (hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292 bits (748), Expect = 2.29e-99
Identity = 151/157 (96.18%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDL 60
           MWWLRGIQTIRNADGGGG  SAGLVFSTFARYFSRSRAENLRKINPKLTP EASLVAQDL
Sbjct: 1   MWWLRGIQTIRNADGGGG--SAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDL 60

Query: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120
           YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL
Sbjct: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120

Query: 121 LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157
           LATP+DPR EELKSASEPVVQRRKKQKAQIRRRK SK
Sbjct: 121 LATPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 155

[Close]

BLAST of Cp4.1LG05g07550 vs. NCBI nr
Match: XP_022996189.1 (uncharacterized protein LOC111491495 [Cucurbita maxima])

HSP 1 Score: 291 bits (745), Expect = 6.57e-99
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDL 60
           MWWLRGIQTIRNADGGGG  SAGLVFSTFARYFSRSRAENLRKINPKLTP EASLVAQDL
Sbjct: 1   MWWLRGIQTIRNADGGGG--SAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDL 60

Query: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120
           YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL
Sbjct: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120

Query: 121 LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157
           LATP+DPRAEELKSASEPVVQRRKKQKA+IRR+K SK
Sbjct: 121 LATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK 155

[Close]

BLAST of Cp4.1LG05g07550 vs. NCBI nr
Match: KAG6605625.1 (hypothetical protein SDJN03_02942, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 289 bits (739), Expect = 5.40e-98
Identity = 150/157 (95.54%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDL 60
           MWWLRGIQTIRNADGGGG  SAGLVFSTFAR FSRSRAENLRKINPKLTP EASLVAQDL
Sbjct: 1   MWWLRGIQTIRNADGGGG--SAGLVFSTFARCFSRSRAENLRKINPKLTPQEASLVAQDL 60

Query: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120
           YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL
Sbjct: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120

Query: 121 LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157
           LATP+DPR EELKSASEPVVQRRKKQKAQIRRRK SK
Sbjct: 121 LATPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 155

[Close]

BLAST of Cp4.1LG05g07550 vs. ExPASy TrEMBL
Match: A0A6J1H3U5 (uncharacterized protein LOC111459852 OS=Cucurbita moschata OX=3662 GN=LOC111459852 PE=4 SV=1)

HSP 1 Score: 294 bits (753), Expect = 1.92e-100
Identity = 152/157 (96.82%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDL 60
           MWWLRGIQTIRNADGGGG  SAGLVFSTF RYFSRSRAENLRKINPKLTP EASLVAQDL
Sbjct: 1   MWWLRGIQTIRNADGGGG--SAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDL 60

Query: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120
           YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL
Sbjct: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120

Query: 121 LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157
           LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRK SK
Sbjct: 121 LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK 155

[Close]

BLAST of Cp4.1LG05g07550 vs. ExPASy TrEMBL
Match: A0A6J1K817 (uncharacterized protein LOC111491495 OS=Cucurbita maxima OX=3661 GN=LOC111491495 PE=4 SV=1)

HSP 1 Score: 291 bits (745), Expect = 3.18e-99
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDL 60
           MWWLRGIQTIRNADGGGG  SAGLVFSTFARYFSRSRAENLRKINPKLTP EASLVAQDL
Sbjct: 1   MWWLRGIQTIRNADGGGG--SAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDL 60

Query: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120
           YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL
Sbjct: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120

Query: 121 LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157
           LATP+DPRAEELKSASEPVVQRRKKQKA+IRR+K SK
Sbjct: 121 LATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK 155

[Close]

BLAST of Cp4.1LG05g07550 vs. ExPASy TrEMBL
Match: A0A0A0KK52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1)

HSP 1 Score: 242 bits (617), Expect = 9.98e-80
Identity = 125/155 (80.65%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 3   WLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDLYG 62
           W R IQ I NADGGGG   AGLVF+TFAR+FSR RAENLRKINPKLTP EASLVAQDLYG
Sbjct: 2   WFRSIQRIGNADGGGG--FAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYG 61

Query: 63  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 122
           VV+QHGPLT+SNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML LFC+ VGSNKKFLL 
Sbjct: 62  VVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLC 121

Query: 123 TPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157
           TPDDPRAEELK++SE   QR+K+ K+  +RRKTSK
Sbjct: 122 TPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of Cp4.1LG05g07550 vs. ExPASy TrEMBL
Match: A0A6J1E538 (uncharacterized protein LOC111026127 OS=Momordica charantia OX=3673 GN=LOC111026127 PE=4 SV=1)

HSP 1 Score: 239 bits (609), Expect = 1.71e-78
Identity = 126/156 (80.77%), Postives = 137/156 (87.82%), Query Frame = 0


Query: 3   WLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDLYG 62
           WLRG Q I +ADGGGG  SAGLVFSTFARYFSR RAENLRKINPKLTP EASLVAQDLYG
Sbjct: 2   WLRGFQRIGHADGGGG--SAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYG 61

Query: 63  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 122
           VVKQHGPL++SNAWIKAQE GV GLNSKTHMKL+LKWMRGRKML+L CNQVGSNKKFLL+
Sbjct: 62  VVKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQVGSNKKFLLS 121

Query: 123 T-PDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157
           T PDDP+A++LKS+SE  VQR K+ K   RRRK SK
Sbjct: 122 TLPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK 155

[Close]

BLAST of Cp4.1LG05g07550 vs. ExPASy TrEMBL
Match: A0A1S3ATS9 (uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=4 SV=1)

HSP 1 Score: 236 bits (602), Expect = 1.92e-77
Identity = 122/155 (78.71%), Postives = 133/155 (85.81%), Query Frame = 0


Query: 3   WLRGIQTIRNADGGGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDLYG 62
           W R IQ I N DGGGG    GLVF+TFAR+FSR RAENLRKINPKLTP EASLVAQDLYG
Sbjct: 2   WFRSIQRIGNTDGGGG--LPGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYG 61

Query: 63  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 122
           V++QHGPLTVSNAWIKAQESGV GLNSKTHMKLLLKWMRGR+ML LFC+ VGSNKKFLL 
Sbjct: 62  VIQQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRRMLNLFCHYVGSNKKFLLC 121

Query: 123 TPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157
           TPDDPRAEELK+ SE   QR+K+ K+  +RRKTSK
Sbjct: 122 TPDDPRAEELKNYSESGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of Cp4.1LG05g07550 vs. TAIR 10
Match: AT1G73940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-32
Identity = 76/147 (51.70%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 16  GGGGG-----SAGLVF-------STFARYFSRSRAENLRKINPKLTPHEASLVAQDLYGV 75
           GGGGG      A  +F       S   RY SR RA N+RKINPK+   EA  ++  LY +
Sbjct: 5   GGGGGLRKLCRASAIFDNEISYNSLLVRYMSRERAVNVRKINPKVPIQEAYAISNSLYDL 64

Query: 76  VKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL-LA 135
            K HGPL+V N W++AQE+GV GLNSKTHMKLLLKWMRG+KML+L CNQVGS+KKF    
Sbjct: 65  FKLHGPLSVPNTWLRAQEAGVSGLNSKTHMKLLLKWMRGKKMLKLICNQVGSSKKFFHTV 124

Query: 136 TPDDPRAEELKSASEPVVQRRKKQKAQ 150
            P+DP  E+  +  E   Q  KK++++
Sbjct: 125 LPEDPLQEQPAAPIENKKQAVKKKRSK 151

[Close]

BLAST of Cp4.1LG05g07550 vs. TAIR 10
Match: AT5G49410.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17
Identity = 36/99 (36.36%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 25  VFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGV 84
           V     R+F+      ++ I     P +   + + ++ ++K HGPLT++  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 85  GGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT 124
            GL SK HMK++L+WMR R+ L+L CN VG +K+FL  T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

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BLAST of Cp4.1LG05g07550 vs. TAIR 10
Match: AT5G49410.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17
Identity = 36/99 (36.36%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 25  VFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGV 84
           V     R+F+      ++ I     P +   + + ++ ++K HGPLT++  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 85  GGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT 124
            GL SK HMK++L+WMR R+ L+L CN VG +K+FL  T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g07550 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG05g07550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534502.1	3.37e-106	100.00	uncharacterized protein LOC111796041 [Cucurbita pepo subsp. pepo]	[more]
XP_022958708.1	3.96e-100	96.82	uncharacterized protein LOC111459852 [Cucurbita moschata]	[more]
KAG7035535.1	2.29e-99	96.18	hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022996189.1	6.57e-99	95.54	uncharacterized protein LOC111491495 [Cucurbita maxima]	[more]
KAG6605625.1	5.40e-98	95.54	hypothetical protein SDJN03_02942, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG05g07550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3U5	1.92e-100	96.82	uncharacterized protein LOC111459852 OS=Cucurbita moschata OX=3662 GN=LOC1114598...	[more]
A0A6J1K817	3.18e-99	95.54	uncharacterized protein LOC111491495 OS=Cucurbita maxima OX=3661 GN=LOC111491495...	[more]
A0A0A0KK52	9.98e-80	80.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1	[more]
A0A6J1E538	1.71e-78	80.77	uncharacterized protein LOC111026127 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]
A0A1S3ATS9	1.92e-77	78.71	uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=...	[more]

BLAST of Cp4.1LG05g07550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73940.1	2.1e-32	51.70	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G49410.1	1.1e-17	36.36	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G49410.2	1.1e-17	36.36	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..157
None	No IPR available	PANTHER	PTHR35110	EXPRESSED PROTEIN	coord: 9..152
None	No IPR available	PANTHER	PTHR35110:SF1	EXPRESSED PROTEIN	coord: 9..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g07550.1	Cp4.1LG05g07550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane