Cp4.1LG05g07080 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG05g07080
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionrRNA processing protein-related
LocationCp4.1LG05: 4373093 .. 4374961 (+)
RNA-Seq ExpressionCp4.1LG05g07080
SyntenyCp4.1LG05g07080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAACCCTAAAAATTGAGGCCTTGGATAGCAATTTGCCCCGCTGGTTTTTAGGGTTTATCAAAGGGCTTTAAGCGTCGATTTTCCTCCGCACTTCGAGCAGCTGGAAGCGACGGAAGAAGGGTTGGCATTTGATTCTAAAAACATTTTCATTCTTTGATCCAAATCGGTAATCCGTTGTTGTTCTTCGCTTCTTTTTTATTTGCCTTTGAGCTTATAATCATGTTTTGGTTTTGTCTGTTTGGTTTTAGTGCCTCAGTTGTCTCGATTTTGGTTCGTCGTCTTTGATTGTGTGAAAATGTGTAGTCATTAATTTTGATTATAATTATTTTCTTGCTCTTCTTGTTGCCTCGTATGTTATTATATCGTGAGGATTATTGTTCGCCGTCCCTCGTTAGCTGGTATTAAGTATATTTTTGTATGGCATAGTTTTTAAGTCTTTTCAAATGATGAACAATGCTGTAAGTAATGTTTGCGTTGAATCTTTAGGTCGTTTTGCGACTTGATAATTGAATAGTTAGTCTGATTTTTGAAAAGAGTCATTTTTCCTCAAGATGTATTGCTACTTAATGGACGATACTAATGGAATTAAATCTAAAACTGTTGCTGTCTTCCTTCCATGCGTACATTTGGTTATATCGCCTATTTTTGGGATAGAATTAGCAGGTCTAGAGGTCTAATCTTAACGACGATCATGGTTTTCGATAGGTTTTAATGGGTGTATCAGATAAAAAGGATAGCTTCTTAAATGAGGATACAATGGTAGATGATGAGCTTGATAGTGAAGATTCTGAGTTTGGATCTGAATCTGAATCTGAGGAGGAAGAGGATGTGAAATTGTCTGAACCGTCGAAGAATGCAATATACAATGCCGACGGTCTTCTTGATAAGCTTGGAGACATTAGCTGGCCCGAAAATGTGGGATGGATACACAAACTATCTCTTGATATTGATCAAGAAAAAGAGGTAGATGTAAATGATGATCTAGCTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGAACAAGAATGGCCCTTGAGAAGTTCCAATCTTTAGGACTCCCTTTTCTCAGGCCACCAGACTATTATGCAGAGATGGTGAAGACGGATACCCACATGGTAAAAGTGAAAGGCCGGTTGCTAATGGAACAGAAAAAGATGGAGGAGGCCGAGGAAAGAAGGAAGGCGAGAGAAGCGAAGAAATTAGCTAAAGAGATTCAAGCTCAGAAGCTAAAGGAGAGGGCTAAACAAAAGAAAGAGGAGATTGAGTCTGTTAAGAAATGGAGGAAGCAGAGGCAAAAGAGTGGTTTTTCTGATAAAGGCGGTGAGATGGACTTATCGTTTGAAGACGGGAAGGCGTTTGATAGGTCTGGTGGTAAGAAGAGGCCCGGGGTGTCTCCTGGCGATCGCTCCGGAGGGAAGGCAAGACATGGTGGAGGTGGAAAAGGAAAAAATCCGAAGAAAAGAGATTTCAGAGATTCGAAGTTCGGATTCGGCGGGAGGAAAAGTATGAAGAAACAAAACACAGCTGAGACAACAAATGATATTAGGGGATTCAACAATGGAAGTTTGTCAAGCAATAAAAGAAGGAAGAAGTCATAGATTAATGCAGTCAGTCAGTCAGTCCTTTCAAGTTTAGAGATGGTGGGTATTGTTGTGATCAAACTATAGTTTTGCTTTTTTTGAAACTTTCATTCTGTAAACCAAGATCATGTAAACTTTGAGGCTGTTAATTTGTGTTTCTTTTTTAAAAATACTAAGTTTGGTAGTTATTGTTTTTGTGCAATTAAGGTTTAAACTTATATAAGCTTGTATTGTATAATCTTTAATACTTTGTAGTTCATGCTTGTTATAGCAACGTAGATGA

mRNA sequence

TAAAACCCTAAAAATTGAGGCCTTGGATAGCAATTTGCCCCGCTGGTTTTTAGGGTTTATCAAAGGGCTTTAAGCGTCGATTTTCCTCCGCACTTCGAGCAGCTGGAAGCGACGGAAGAAGGGTTTTAATGGGTGTATCAGATAAAAAGGATAGCTTCTTAAATGAGGATACAATGGTAGATGATGAGCTTGATAGTGAAGATTCTGAGTTTGGATCTGAATCTGAATCTGAGGAGGAAGAGGATGTGAAATTGTCTGAACCGTCGAAGAATGCAATATACAATGCCGACGGTCTTCTTGATAAGCTTGGAGACATTAGCTGGCCCGAAAATGTGGGATGGATACACAAACTATCTCTTGATATTGATCAAGAAAAAGAGGTAGATGTAAATGATGATCTAGCTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGAACAAGAATGGCCCTTGAGAAGTTCCAATCTTTAGGACTCCCTTTTCTCAGGCCACCAGACTATTATGCAGAGATGGTGAAGACGGATACCCACATGGTAAAAGTGAAAGGCCGGTTGCTAATGGAACAGAAAAAGATGGAGGAGGCCGAGGAAAGAAGGAAGGCGAGAGAAGCGAAGAAATTAGCTAAAGAGATTCAAGCTCAGAAGCTAAAGGAGAGGGCTAAACAAAAGAAAGAGGAGATTGAGTCTGTTAAGAAATGGAGGAAGCAGAGGCAAAAGAGTGGTTTTTCTGATAAAGGCGGTGAGATGGACTTATCGTTTGAAGACGGGAAGGCGTTTGATAGGTCTGGTGGTAAGAAGAGGCCCGGGGTGTCTCCTGGCGATCGCTCCGGAGGGAAGGCAAGACATGGTGGAGGTGGAAAAGGAAAAAATCCGAAGAAAAGAGATTTCAGAGATTCGAAGTTCGGATTCGGCGGGAGGAAAAGTATGAAGAAACAAAACACAGCTGAGACAACAAATGATATTAGGGGATTCAACAATGGAAGTTTGTCAAGCAATAAAAGAAGGAAGAAGTCATAGATTAATGCAGTCAGTCAGTCAGTCCTTTCAAGTTTAGAGATGGTGGGTATTGTTGTGATCAAACTATAGTTTTGCTTTTTTTGAAACTTTCATTCTGTAAACCAAGATCATGTAAACTTTGAGGCTGTTAATTTGTGTTTCTTTTTTAAAAATACTAAGTTTGGTAGTTATTGTTTTTGTGCAATTAAGGTTTAAACTTATATAAGCTTGTATTGTATAATCTTTAATACTTTGTAGTTCATGCTTGTTATAGCAACGTAGATGA

Coding sequence (CDS)

ATGGGTGTATCAGATAAAAAGGATAGCTTCTTAAATGAGGATACAATGGTAGATGATGAGCTTGATAGTGAAGATTCTGAGTTTGGATCTGAATCTGAATCTGAGGAGGAAGAGGATGTGAAATTGTCTGAACCGTCGAAGAATGCAATATACAATGCCGACGGTCTTCTTGATAAGCTTGGAGACATTAGCTGGCCCGAAAATGTGGGATGGATACACAAACTATCTCTTGATATTGATCAAGAAAAAGAGGTAGATGTAAATGATGATCTAGCTAGAGAGCTTGCATTCTATACACAGGCTTTGCAGGGAACAAGAATGGCCCTTGAGAAGTTCCAATCTTTAGGACTCCCTTTTCTCAGGCCACCAGACTATTATGCAGAGATGGTGAAGACGGATACCCACATGGTAAAAGTGAAAGGCCGGTTGCTAATGGAACAGAAAAAGATGGAGGAGGCCGAGGAAAGAAGGAAGGCGAGAGAAGCGAAGAAATTAGCTAAAGAGATTCAAGCTCAGAAGCTAAAGGAGAGGGCTAAACAAAAGAAAGAGGAGATTGAGTCTGTTAAGAAATGGAGGAAGCAGAGGCAAAAGAGTGGTTTTTCTGATAAAGGCGGTGAGATGGACTTATCGTTTGAAGACGGGAAGGCGTTTGATAGGTCTGGTGGTAAGAAGAGGCCCGGGGTGTCTCCTGGCGATCGCTCCGGAGGGAAGGCAAGACATGGTGGAGGTGGAAAAGGAAAAAATCCGAAGAAAAGAGATTTCAGAGATTCGAAGTTCGGATTCGGCGGGAGGAAAAGTATGAAGAAACAAAACACAGCTGAGACAACAAATGATATTAGGGGATTCAACAATGGAAGTTTGTCAAGCAATAAAAGAAGGAAGAAGTCATAG

Protein sequence

MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESESEEEEDVKLSEPSKNAIYNADGLLDKLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKARHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Homology
[Close]
BLAST of Cp4.1LG05g07080 vs. ExPASy Swiss-Prot
Match: Q9LUJ5 (Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana OX=3702 GN=EBP2 PE=1 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.1e-87
Identity = 189/294 (64.29%), Postives = 227/294 (77.21%), Query Frame = 0 

Query: 11  LNEDTMVDDEL------DSEDSEFGSESESEEEEDV--KLSEPSKNAIYNADGLLDKLGD 70
           L ED + DDE+      D+ DSE  S S+S+ E ++  KL+EP+K AIYN DGLLDKL D
Sbjct: 3   LEEDIVSDDEMNMIDEDDATDSEAESLSDSDTENEITEKLAEPTKTAIYNRDGLLDKLQD 62

Query: 71  ISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFLRP 130
           ISWPE+V W HKL+++IDQ   VDVNDDLARE AFYTQAL+GTR A  K   +G+ FLRP
Sbjct: 63  ISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFLRP 122

Query: 131 PDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQKK 190
            +YYAEMVK+D HM KVK RLL E+K++EE+EERRKAR+ K++AKE+Q+QK+KERAK+KK
Sbjct: 123 ANYYAEMVKSDVHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKEKK 182

Query: 191 EEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKARHGG 250
           + IESVKKWRKQRQ+SGFSDK GE +L FE GK+F R GGKKRPGVSPGDRSGGK R   
Sbjct: 183 DNIESVKKWRKQRQQSGFSDKAGEPELDFESGKSFQRGGGKKRPGVSPGDRSGGKGR--- 242

Query: 251 GGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIR-GFNNGSLSSNKRRKK 296
                  KKR+FRDSKFG GGRK + KQNTAETTND + GF  G  S NKR+K+
Sbjct: 243 PTSRMGNKKREFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKASGNKRQKR 293

[Close]
BLAST of Cp4.1LG05g07080 vs. ExPASy Swiss-Prot
Match: Q9I8J6 (Probable rRNA-processing protein EBP2 OS=Xenopus laevis OX=8355 GN=ebna1bp2 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.4e-18
Identity = 93/302 (30.79%), Postives = 147/302 (48.68%), Query Frame = 0 

Query: 4   SDKKDSFLNEDTMVDDELDSEDSEFGSESESEEEEDVKLSEPSKNAIYNADGLLDKLGDI 63
           S + DS  +   + D EL     E  S+ + +   +V L E  K    +A GL   L D+
Sbjct: 9   SPESDSDFDASELTDKEL----QEAFSQGKLKPGLNVVL-EGKKKPFNDASGLKQSLKDL 68

Query: 64  SWPENVGWIHKLSLDID--------------QEKEVDVNDDLARELAFYTQALQGTRMAL 123
                + W+ +L + +D                 +++  DD  RE+ FY QA      +L
Sbjct: 69  K--NELPWVERLDVTVDPVVDTTGQNGQTDPNTSDINAEDDFQREMCFYRQAQAAVLYSL 128

Query: 124 EKFQSLGLPFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEI 183
            + + L +   RP DY+AEM KTD HM K++ +L ++Q  ME++E+ ++ R  +K  K++
Sbjct: 129 PRLRKLKVATKRPDDYFAEMAKTDQHMQKIRHKLQLKQASMEKSEKAKQLRALRKYGKKV 188

Query: 184 QAQKLKERAKQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVS 243
           Q + L++R K+K   +  +KK++K     G SDK     L F +G        KK P  +
Sbjct: 189 QVEVLQKRQKEKSAMVTQIKKYQK-----GLSDK-----LDFLEGD----QTPKKTPNKT 248

Query: 244 PGDRSGGKARHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSS 292
            G  +  KA      K     KR ++D KFGFGG+K   K NT  + ND+ GF  GS++ 
Sbjct: 249 GGSAAAQKA------KNTPSAKRRYKDQKFGFGGKKKGSKGNTKGSYNDVSGF-RGSVAH 282

[Close]
BLAST of Cp4.1LG05g07080 vs. ExPASy Swiss-Prot
Match: P36049 (rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=EBP2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-17
Identity = 87/306 (28.43%), Postives = 151/306 (49.35%), Query Frame = 0 

Query: 4   SDKKDSFLNEDTMVDDELDSEDSEFGSESESEEEEDVKLSEPS-----------KNAIYN 63
           S+ +D   +E+   +DE      E   + E EEE+DV LS+             K  + N
Sbjct: 138 SESEDDSESENDSEEDEDVVAKEESEEKEEQEEEQDVPLSDVEFDSDADVVPHHKLTVNN 197

Query: 64  ADGLLDKLG--DISWPENVGWIHK-LSLDIDQEKEV-DVNDDLARELAFYTQALQGTRMA 123
              +   L    + W ++    H+ ++ + + ++ + D+ DD  RELAFY Q+L    +A
Sbjct: 198 TKAMKHALERVQLPWKKHSFQEHQSVTSETNTDEHIKDIYDDTERELAFYKQSLDAVLVA 257

Query: 124 LEKFQSLGLPFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKE 183
            ++ + L +PF RP DY+AEMVK+D HM K+KG+L+ E    +  EE R+ R+ KK  K+
Sbjct: 258 RDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEEASDKKAREEARRQRQLKKFGKQ 317

Query: 184 IQAQKLKERAKQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFE-DGKAFDRSGGKKRPG 243
           +Q   L++R  +K+E +E +K  + +R+ +        + +  E +GK FDR        
Sbjct: 318 VQNATLQKRQLEKRETLEKIKSLKNKRKHNEIDHSEFNVGVEEEVEGKRFDR-------- 377

Query: 244 VSPGDRSGGKARHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSL 294
                             G+   KR  +++K+G GG K  K++N A ++ D+ GF++  +
Sbjct: 378 ------------------GRPNGKRAAKNAKYGQGGMKRFKRKNDATSSADVSGFSSRKM 417

[Close]
BLAST of Cp4.1LG05g07080 vs. ExPASy Swiss-Prot
Match: Q9D903 (Probable rRNA-processing protein EBP2 OS=Mus musculus OX=10090 GN=Ebna1bp2 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.0e-17
Identity = 90/294 (30.61%), Postives = 148/294 (50.34%), Query Frame = 0 

Query: 14  DTMVDDELDSE-DSEFGSESESEEEEDVKLSEPS--------KNAIYNADGLLDKLGDIS 73
           DT    E DSE D+   S+ E ++     L +P         K A+ +  GL   L +  
Sbjct: 2   DTPPLSESDSESDACLASDQELQDAFSRGLLKPGLNVVLEKPKKAVNDVSGLKQCLAE-- 61

Query: 74  WPENVGWIHKLSLDI----------------DQEKEVDVNDDLARELAFYTQALQGTRMA 133
           +  ++ W+ +L + +                DQ+K V+  DD  RE++FY QA       
Sbjct: 62  FRRDLEWVERLDVTLGPVPEVSETQPTPQNQDQKKGVNPEDDFQREMSFYRQAQAAVLAV 121

Query: 134 LEKFQSLGLPFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKE 193
           L +   L +P  RP DY+AEM K+D  M K++ +L  +Q  ME++E+ ++ R  +K  K+
Sbjct: 122 LPRLHQLQVPTKRPTDYFAEMAKSDQQMQKIRQKLQTKQAAMEKSEKAKQLRALRKYGKK 181

Query: 194 IQAQKLKERAKQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGV 253
           +Q + L++R ++K   + ++KK++K     GFSDK   +D    D K  +RS        
Sbjct: 182 VQTEVLQKRQREKAHMMNAIKKYQK-----GFSDK---LDFLEGDQKPVERSA------- 241

Query: 254 SPGDRSGGKARHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGF 283
               ++GGK +     KG N K+R +++ KFGFGG+K   K NT E+ +D+  F
Sbjct: 242 ----KAGGKGQQ--MSKGPNAKRR-YKNQKFGFGGKKKGSKWNTKESYDDVSSF 271

[Close]
BLAST of Cp4.1LG05g07080 vs. ExPASy Swiss-Prot
Match: Q09958 (Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans OX=6239 GN=C18A3.3 PE=1 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 2.2e-16
Identity = 96/313 (30.67%), Postives = 151/313 (48.24%), Query Frame = 0 

Query: 4   SDKKDSFLNEDTMVDDE----LDSEDSEFGSESESEE----------EEDVKLSEPSKNA 63
           SD   S  + D  ++++    +D E+ E   + +  E          ++ + +    K  
Sbjct: 25  SDSDGSEFDFDNAIEEKPMEAMDIEEVESDGDDDERELQAAFAAGLLKDGLNIQVAKKRP 84

Query: 64  IYNADG-LLDKLGDISWPENVGWIHKLSL---DIDQEKEVDVNDDLARELAFYTQALQGT 123
           I N    + +KL +I+  +++ W+  L +     + +K+V+ NDD  REL FY QA +  
Sbjct: 85  IINKSAEMKEKLAEIT--KDLPWVETLEVVTPHSEMDKKVE-NDDFQRELNFYKQAEKAV 144

Query: 124 RMALEKFQSLGLPFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKL 183
           ++A  +  +LG+  LRP DYYAEM K+DTHM KV+ RLL  Q+  E  E  R+ RE KK 
Sbjct: 145 QIAYPRLLNLGIKVLRPTDYYAEMAKSDTHMQKVRKRLLGIQEMKERQEAFRRIREEKKF 204

Query: 184 AKEIQAQKLKERAKQKKEEIESVKKWRKQRQK------SGFSDKGGEMDLSFEDGKAFDR 243
           A ++Q + L  +  +KK   E+VKK +K  ++      +     G + D     G   DR
Sbjct: 205 AVKVQKEVLAAKNTEKKNLAEAVKKHKKGMKQQLEDMLNNVKRHGLDQDDDAPTGAFGDR 264

Query: 244 SGGKKRPGVSPGDRSGGKARHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDI 293
            GG+       G    G A  GG  +     KR  +  KFG+GG+K   K+N  E+ ND+
Sbjct: 265 LGGR-------GGAGRGGAGRGGSMRNAGELKRKLKSDKFGYGGKKKGMKRNNKESFNDL 324

[Close]
BLAST of Cp4.1LG05g07080 vs. NCBI nr
Match: XP_023534524.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita pepo subsp. pepo] >XP_023534525.1 probable rRNA-processing protein EBP2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 542 bits (1397), Expect = 1.16e-193
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0 

Query: 1   MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESESEEEEDVKLSEPSKNAIYNADGLLDKL 60
           MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESESEEEEDVKLSEPSKNAIYNADGLLDKL
Sbjct: 1   MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESESEEEEDVKLSEPSKNAIYNADGLLDKL 60

Query: 61  GDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFL 120
           GDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFL
Sbjct: 61  GDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFL 120

Query: 121 RPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQ 180
           RPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQ
Sbjct: 121 RPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQ 180

Query: 181 KKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKARH 240
           KKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKARH
Sbjct: 181 KKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKARH 240

Query: 241 GGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296
           GGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Sbjct: 241 GGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296

[Close]
BLAST of Cp4.1LG05g07080 vs. NCBI nr
Match: XP_022995363.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita maxima] >XP_022995364.1 probable rRNA-processing protein EBP2 homolog [Cucurbita maxima])

HSP 1 Score: 533 bits (1372), Expect = 7.50e-190
Identity = 290/296 (97.97%), Postives = 294/296 (99.32%), Query Frame = 0 

Query: 1   MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESESEEEEDVKLSEPSKNAIYNADGLLDKL 60
           MGVSD+KDSF+NEDTM DD+LDSEDS+FGSESESEEEEDVKLSEPSKNAIYNADGLLDKL
Sbjct: 1   MGVSDEKDSFVNEDTMEDDDLDSEDSDFGSESESEEEEDVKLSEPSKNAIYNADGLLDKL 60

Query: 61  GDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFL 120
           GDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFL
Sbjct: 61  GDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFL 120

Query: 121 RPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQ 180
           RPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQ
Sbjct: 121 RPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQ 180

Query: 181 KKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKARH 240
           KKEEIESVKKWRKQRQKSGFSDKGGEMDL FEDGKAFDRSGGKKRPGVSPGDRSGGKARH
Sbjct: 181 KKEEIESVKKWRKQRQKSGFSDKGGEMDLLFEDGKAFDRSGGKKRPGVSPGDRSGGKARH 240

Query: 241 GGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296
           GGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Sbjct: 241 GGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296

[Close]
BLAST of Cp4.1LG05g07080 vs. NCBI nr
Match: XP_022958567.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita moschata] >XP_022958569.1 probable rRNA-processing protein EBP2 homolog [Cucurbita moschata])

HSP 1 Score: 531 bits (1368), Expect = 3.29e-189
Identity = 292/298 (97.99%), Postives = 295/298 (98.99%), Query Frame = 0 

Query: 1   MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESESE--EEEDVKLSEPSKNAIYNADGLLD 60
           MGVSD+KDSFLNEDTM DD+LDSEDS+FGSESESE  EEEDVKLSEPSKNAIYNADGLLD
Sbjct: 1   MGVSDEKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAIYNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA
Sbjct: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240
           KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA
Sbjct: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240

Query: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296
           RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Sbjct: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 298

[Close]
BLAST of Cp4.1LG05g07080 vs. NCBI nr
Match: KAG7035578.1 (putative rRNA-processing protein EBP2-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 531 bits (1367), Expect = 4.67e-189
Identity = 291/298 (97.65%), Postives = 295/298 (98.99%), Query Frame = 0 

Query: 1   MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESESE--EEEDVKLSEPSKNAIYNADGLLD 60
           MGVSD+KDSFLNEDTM DD+LDSEDS+FGSESESE  EEEDVKLSEPSKNA+YNADGLLD
Sbjct: 1   MGVSDQKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAVYNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA
Sbjct: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240
           KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA
Sbjct: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240

Query: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296
           RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Sbjct: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 298

[Close]
BLAST of Cp4.1LG05g07080 vs. NCBI nr
Match: XP_038876320.1 (probable rRNA-processing protein EBP2 homolog [Benincasa hispida])

HSP 1 Score: 471 bits (1211), Expect = 3.02e-165
Identity = 267/301 (88.70%), Postives = 279/301 (92.69%), Query Frame = 0 

Query: 1   MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESESE--EEEDVKLSEPSKNAIYNADGLLD 60
           MGVS K  SFLNED + DD+L SEDSEF SESESE  E+EDV+LSEPSKNAIYNADGLLD
Sbjct: 1   MGVSVKDASFLNEDKIDDDDLHSEDSEFESESESESEEDEDVELSEPSKNAIYNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENV WIHKLSLDIDQEKEVDVNDDLARELAFYTQALQG RMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGARMALEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEAEERRKAREAKKLAKEIQAQK KERA
Sbjct: 121 FLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFS--DKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGG 240
           KQKKEEIESVKKWRKQRQK+GF+  DKGG+MD SFEDGK F+RSGGKKRPGVSPGDR+GG
Sbjct: 181 KQKKEEIESVKKWRKQRQKNGFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDRTGG 240

Query: 241 KARHGGGGKGKNPKK-RDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKK 296
           KARHGGGGKGKNPKK RDFRDSKFGFGGRKS+ KQNTAETTNDI GFNNGSLSSNKRRK+
Sbjct: 241 KARHGGGGKGKNPKKKRDFRDSKFGFGGRKSLNKQNTAETTNDISGFNNGSLSSNKRRKR 300

[Close]
BLAST of Cp4.1LG05g07080 vs. ExPASy TrEMBL
Match: A0A6J1K7Q8 (probable rRNA-processing protein EBP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490936 PE=3 SV=1)

HSP 1 Score: 533 bits (1372), Expect = 3.63e-190
Identity = 290/296 (97.97%), Postives = 294/296 (99.32%), Query Frame = 0 

Query: 1   MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESESEEEEDVKLSEPSKNAIYNADGLLDKL 60
           MGVSD+KDSF+NEDTM DD+LDSEDS+FGSESESEEEEDVKLSEPSKNAIYNADGLLDKL
Sbjct: 1   MGVSDEKDSFVNEDTMEDDDLDSEDSDFGSESESEEEEDVKLSEPSKNAIYNADGLLDKL 60

Query: 61  GDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFL 120
           GDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFL
Sbjct: 61  GDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFL 120

Query: 121 RPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQ 180
           RPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQ
Sbjct: 121 RPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQ 180

Query: 181 KKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKARH 240
           KKEEIESVKKWRKQRQKSGFSDKGGEMDL FEDGKAFDRSGGKKRPGVSPGDRSGGKARH
Sbjct: 181 KKEEIESVKKWRKQRQKSGFSDKGGEMDLLFEDGKAFDRSGGKKRPGVSPGDRSGGKARH 240

Query: 241 GGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296
           GGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Sbjct: 241 GGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296

[Close]
BLAST of Cp4.1LG05g07080 vs. ExPASy TrEMBL
Match: A0A6J1H264 (probable rRNA-processing protein EBP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111459763 PE=3 SV=1)

HSP 1 Score: 531 bits (1368), Expect = 1.59e-189
Identity = 292/298 (97.99%), Postives = 295/298 (98.99%), Query Frame = 0 

Query: 1   MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESESE--EEEDVKLSEPSKNAIYNADGLLD 60
           MGVSD+KDSFLNEDTM DD+LDSEDS+FGSESESE  EEEDVKLSEPSKNAIYNADGLLD
Sbjct: 1   MGVSDEKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAIYNADGLLD 60

Query: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120

Query: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180
           FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA
Sbjct: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180

Query: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240
           KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA
Sbjct: 181 KQKKEEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240

Query: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296
           RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS
Sbjct: 241 RHGGGGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 298

[Close]
BLAST of Cp4.1LG05g07080 vs. ExPASy TrEMBL
Match: A0A6J1DQA0 (probable rRNA-processing protein EBP2 homolog OS=Momordica charantia OX=3673 GN=LOC111022583 PE=3 SV=1)

HSP 1 Score: 469 bits (1206), Expect = 7.31e-165
Identity = 265/299 (88.63%), Postives = 280/299 (93.65%), Query Frame = 0 

Query: 1   MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESESEEEEDVKLSEPSKNAIYNADGLLDKL 60
           MGVSDK D FLNEDTM  D+LDSEDS+F SES+SEE++DVKLSEPSK AI+NADGLLDKL
Sbjct: 1   MGVSDKDDPFLNEDTMEYDDLDSEDSDFESESDSEEDKDVKLSEPSKTAIHNADGLLDKL 60

Query: 61  GDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFL 120
           GDISWPEN GWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQG RMA EKFQSLGLPFL
Sbjct: 61  GDISWPENAGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGARMAFEKFQSLGLPFL 120

Query: 121 RPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQ 180
           RP DYYAEMVKTDTHM KVKGRLL EQ+KMEEAEERRKAREAK+LAKEIQAQKLKERAKQ
Sbjct: 121 RPSDYYAEMVKTDTHMEKVKGRLLAEQRKMEEAEERRKAREAKRLAKEIQAQKLKERAKQ 180

Query: 181 KKEEIESVKKWRKQRQKSGFS--DKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240
           KKEEIESVKKWRKQRQKSGF+  DKGGEMDL+FEDGKAF+RSG KKRPGVSPGDRSGGKA
Sbjct: 181 KKEEIESVKKWRKQRQKSGFAGGDKGGEMDLAFEDGKAFERSG-KKRPGVSPGDRSGGKA 240

Query: 241 RHGGGGKGKNPKK-RDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296
           RHGGG KGKNPKK RDFRDSKFGFGGRKS+KKQNTAETTNDIR FN G+LSSNK+RK+S
Sbjct: 241 RHGGG-KGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRSFNKGTLSSNKKRKRS 297

[Close]
BLAST of Cp4.1LG05g07080 vs. ExPASy TrEMBL
Match: A0A6J1DTZ5 (probable rRNA-processing protein EBP2 homolog OS=Momordica charantia OX=3673 GN=LOC111023109 PE=3 SV=1)

HSP 1 Score: 468 bits (1205), Expect = 1.04e-164
Identity = 264/299 (88.29%), Postives = 279/299 (93.31%), Query Frame = 0 

Query: 1   MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESESEEEEDVKLSEPSKNAIYNADGLLDKL 60
           MGV DK DSFL+EDTM D++LDSEDS+F SESE EEEEDVKLSEPSKNAIYNADGLLDKL
Sbjct: 1   MGVLDKADSFLDEDTMEDEDLDSEDSDFESESE-EEEEDVKLSEPSKNAIYNADGLLDKL 60

Query: 61  GDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFL 120
           GD SWPEN GWIH+LSLDIDQEKEVDVNDDLARELAFYTQALQG RMA EKFQSLGLPFL
Sbjct: 61  GDTSWPENAGWIHRLSLDIDQEKEVDVNDDLARELAFYTQALQGARMAFEKFQSLGLPFL 120

Query: 121 RPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQ 180
           RP DYYAEMVKTDTHM KVKGRLL EQ+KMEEA+ERRKAREAK+LAKEIQAQKLKERAKQ
Sbjct: 121 RPADYYAEMVKTDTHMEKVKGRLLAEQRKMEEADERRKAREAKRLAKEIQAQKLKERAKQ 180

Query: 181 KKEEIESVKKWRKQRQKSGFS--DKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKA 240
           KKEEIESVKKWRKQRQKSGF+  DKGGEMDL+FEDGK F+RSG KKRPGVSPGDRSGGK 
Sbjct: 181 KKEEIESVKKWRKQRQKSGFAGGDKGGEMDLTFEDGKTFERSG-KKRPGVSPGDRSGGKT 240

Query: 241 RHGGGGKGKNPKK-RDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRKKS 296
           RHGGGGKGKNPKK RDFRDSKFGFGGRKS+KKQNTAETT+DIR FN GSLSSNK+RK+S
Sbjct: 241 RHGGGGKGKNPKKKRDFRDSKFGFGGRKSLKKQNTAETTSDIRDFNKGSLSSNKKRKRS 297

[Close]
BLAST of Cp4.1LG05g07080 vs. ExPASy TrEMBL
Match: A0A1S3CT69 (probable rRNA-processing protein EBP2 homolog OS=Cucumis melo OX=3656 GN=LOC103504670 PE=3 SV=1)

HSP 1 Score: 466 bits (1200), Expect = 8.59e-164
Identity = 268/306 (87.58%), Postives = 279/306 (91.18%), Query Frame = 0 

Query: 1   MGVSDKKDSFLNEDTMVDDELDSEDSEFGSESES-----EEEEDVKLSEPSKNAIYNADG 60
           MGVS K   FLNEDT+ DD+L SEDSEF SESES     EEEEDV+LSEPSKNAIYNADG
Sbjct: 1   MGVSIKDADFLNEDTVEDDDLSSEDSEFESESESGSESEEEEEDVELSEPSKNAIYNADG 60

Query: 61  LLDKLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSL 120
           LLDKLGDISWPENV WIHKL+ DIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSL
Sbjct: 61  LLDKLGDISWPENVEWIHKLTFDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSL 120

Query: 121 GLPFLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLK 180
           GLPFLRP DYYAEMVKTDTHM KVKGRLL EQ+KMEEAEERRKAREAKKLAKEIQAQK K
Sbjct: 121 GLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQK 180

Query: 181 ERAKQKKEEIESVKKWRKQRQKSGFS--DKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDR 240
           ERAKQKKEEIESVKKWRKQRQK+ F+  DKGG+MD SFEDGK F+RSGGKKRPGVSPGDR
Sbjct: 181 ERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDR 240

Query: 241 SGGKARHGGGG--KGKN-PKKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSN 296
           SGGKARHGGGG  KGKN  KKRDFRDSKFGFGGRKS+KKQNTAETTNDIRGFNNGSLS+N
Sbjct: 241 SGGKARHGGGGGGKGKNLKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNGSLSNN 300

[Close]
BLAST of Cp4.1LG05g07080 vs. TAIR 10
Match: AT3G22660.1 (rRNA processing protein-related )

HSP 1 Score: 323.2 bits (827), Expect = 2.2e-88
Identity = 189/294 (64.29%), Postives = 227/294 (77.21%), Query Frame = 0 

Query: 11  LNEDTMVDDEL------DSEDSEFGSESESEEEEDV--KLSEPSKNAIYNADGLLDKLGD 70
           L ED + DDE+      D+ DSE  S S+S+ E ++  KL+EP+K AIYN DGLLDKL D
Sbjct: 3   LEEDIVSDDEMNMIDEDDATDSEAESLSDSDTENEITEKLAEPTKTAIYNRDGLLDKLQD 62

Query: 71  ISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPFLRP 130
           ISWPE+V W HKL+++IDQ   VDVNDDLARE AFYTQAL+GTR A  K   +G+ FLRP
Sbjct: 63  ISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFLRP 122

Query: 131 PDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERAKQKK 190
            +YYAEMVK+D HM KVK RLL E+K++EE+EERRKAR+ K++AKE+Q+QK+KERAK+KK
Sbjct: 123 ANYYAEMVKSDVHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKEKK 182

Query: 191 EEIESVKKWRKQRQKSGFSDKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGGKARHGG 250
           + IESVKKWRKQRQ+SGFSDK GE +L FE GK+F R GGKKRPGVSPGDRSGGK R   
Sbjct: 183 DNIESVKKWRKQRQQSGFSDKAGEPELDFESGKSFQRGGGKKRPGVSPGDRSGGKGR--- 242

Query: 251 GGKGKNPKKRDFRDSKFGFGGRKSMKKQNTAETTNDIR-GFNNGSLSSNKRRKK 296
                  KKR+FRDSKFG GGRK + KQNTAETTND + GF  G  S NKR+K+
Sbjct: 243 PTSRMGNKKREFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKASGNKRQKR 293

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g07080 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LUJ53.1e-8764.29Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana OX=3702 GN... [more]
Q9I8J62.4e-1830.79Probable rRNA-processing protein EBP2 OS=Xenopus laevis OX=8355 GN=ebna1bp2 PE=2... [more]
P360491.5e-1728.43rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S... [more]
Q9D9032.0e-1730.61Probable rRNA-processing protein EBP2 OS=Mus musculus OX=10090 GN=Ebna1bp2 PE=2 ... [more]
Q099582.2e-1630.67Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans OX=6239 ... [more]
BLAST of Cp4.1LG05g07080 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023534524.11.16e-193100.00probable rRNA-processing protein EBP2 homolog [Cucurbita pepo subsp. pepo] >XP_0... [more]
XP_022995363.17.50e-19097.97probable rRNA-processing protein EBP2 homolog [Cucurbita maxima] >XP_022995364.1... [more]
XP_022958567.13.29e-18997.99probable rRNA-processing protein EBP2 homolog [Cucurbita moschata] >XP_022958569... [more]
KAG7035578.14.67e-18997.65putative rRNA-processing protein EBP2-like protein [Cucurbita argyrosperma subsp... [more]
XP_038876320.13.02e-16588.70probable rRNA-processing protein EBP2 homolog [Benincasa hispida][more]
BLAST of Cp4.1LG05g07080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K7Q83.63e-19097.97probable rRNA-processing protein EBP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1H2641.59e-18997.99probable rRNA-processing protein EBP2 homolog OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1DQA07.31e-16588.63probable rRNA-processing protein EBP2 homolog OS=Momordica charantia OX=3673 GN=... [more]
A0A6J1DTZ51.04e-16488.29probable rRNA-processing protein EBP2 homolog OS=Momordica charantia OX=3673 GN=... [more]
A0A1S3CT698.59e-16487.58probable rRNA-processing protein EBP2 homolog OS=Cucumis melo OX=3656 GN=LOC1035... [more]
BLAST of Cp4.1LG05g07080 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G22660.12.2e-8864.29rRNA processing protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..263
NoneNo IPR availablePANTHERPTHR13028:SF2BNAA01G24550D PROTEINcoord: 16..295
IPR008610Eukaryotic rRNA processingPFAMPF05890Ebp2coord: 30..293
e-value: 6.8E-74
score: 248.8
IPR008610Eukaryotic rRNA processingPANTHERPTHR13028RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATEDcoord: 16..295

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g07080.1Cp4.1LG05g07080.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042273 ribosomal large subunit biogenesis
biological_process GO:0006364 rRNA processing
cellular_component GO:0034399 nuclear periphery
cellular_component GO:0005730 nucleolus
cellular_component GO:0030687 preribosome, large subunit precursor