Cp4.1LG05g06950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATAAAAGGGTATTTTAGGAAAAATAAATTAGGCTCAGCAGGGGGAGAAAGGGGAAATGGAACGAATCGTAGTCTTTCAATGAATAGGGCAGGCTTGTTGTGAACATTTCTCTAAAAAAGGTGGGTGAAGGTGGAGCTTCAACACTTTAGCTTAGGGAGCTTGCGTGATGGGAAGGCAGCCAGCCTTGTTGTGACAAACTTGGTGTCATGCTGAAAGACAACAAGCTTGTCACCTTCATCATCACCTATGGCCAGGCTCTCCCTAAGCTCACCAACCTCCTCCGTCGCTGCGGTAAGAGCTGTCGCCTCCAATGGACCAACTACCTCTGTCCCGACTTGAAGCACGGCCTCTTTGATGAAGCTGAAGAGCAATTGCTCGCCTCGCAACAGGTACTATAGCTAGAAGGCTAGAAGGCTCACCACCAAATTTTACGCTCTAACTTTTTAGAATTTGGACAAACTTTCATATAAACTTTAATATAAGTCGAAGTAGAGACAATTGAAGGTTTATTGGTAGATGAAATTTTACATTCTAACCTTTTAGAACTTAAAGAACAAATTCGAAAAAAACTTTAGTTTAAGACGAAGTAGAGGCATTGTCTCTCTTCTTCCTTCTGCTTTGACCCGAACACATTCATTTTTGTTGATTTCAGATGGTCAAAGACTGCAGCGACCTTACCGGAAGAACAAATAACGAAATCAAGAACAACTGAAGAAGCTCATCAAGATGGGGATAGATCCGGTCACAACCAAGCCTCTGCAGAAGCAAGAAACAGAAAGTTGCAGCCAAGGAAGCTGCACTGATTCCTCAGCCGCCATATCTCCATTAACAGAAGCTAATTATTGCACTGAAAAAGATGAGCCATTAACAAGCCAACATACGTGGATGGAGGCTCTTAAAGATGATTCCAACATGGGGCAGCAAAATCTACGGTGATATTGGCTCATACAGTGATTACCAACAGCCCCATTGAATAAAAAAAATCCTTCAAACAGCACACTGGAAAATGTATGATCTTTAAAGACTTCAGGATTCAGAAAACTGAGCACAGAAATTTCCAGGTACTGAGTTAAATTTATTACTTCAGATTGAAAATACATATCCTCAGTTTAAACTAGAAAATCTATTTACACAGTTCTGAAAATGAAATACTATGTACATCTTAAGAAATGGCTACATAAATATGTGGGCTCCTGATAGTAATAATATAAGAGTTAAAAAGCCTAACTAGAGCTGCCTATGCAATAAAACAAAACGAGTAAGCTTTGAATCTTACCAGTTGTTGGGAAGCAAAAGATGATGAAGATGGAGCAGCCAAATATGGTGTACGTAAATAGCTTCATCAAGGAAAGGATGGTCTGGTTATATCTGGTGAGTTTTGGCTGCTCTTCACCACCAAATCATAATTGATGGAAGCCAACTGTGATAAATTCTGCAAAAGAAAAACAATGAAGTTGCTGCATCATATTTTGATCTTTCTTTCAAGCCAGCACCAAAATGACATTATTCATACAAATACGGTAACAGAAAATAAAATATATAATATGTATTGGTCTTTGTTCAAGTAGTACCTTTGCTTCTATAATGTTAAAAAAAAAGTACCAATTTTGCTGCTTCAAAAGATAATTAACTTACGAAACTAAATAAATATGAAAAGATTAAGATTAAAAATAAAAATAAAAGAAAAAACAAGAACATAAAAGTGGTAAAAGTATAAAATTAAAGCTCCAAATTTATCGACATTATCAACTTGTAGTCAAATATTTGAAATATTAATTTATATATAAAAGCAGCTAAGCTCTGTTTCTTTGGGAACCCAATCATCAAAGAACCATAAATCTGTTTCTTTGGGAAACCAATCATCAAAGAACCATAAATCTGTTTCTTTGGGAACCCAATCAACAAAGAACCATAAAAGAATTGAAGCCTTCGTTCTAAATAATCATAAGACATCAACACCTTGAAAATATCTTCTATGACAATAAGAGAATTTACAGGCCTGGCATGCCTTACCTTGAAAGAGAAATTGCTGAACGAGTACTTCACAGAAAGGGCTGGTGTACAGAAGTCAGCCAAACTACCACATTCGTCTCCCTGTTTCAATAACATCCAAGAAATCATAGTTACTCAATCAGACTGAAACCTCCAGTCACATCATACAATAGACGGTTGAATTATACTGAACTAGATTCTATATGATGAAAAGTTTCTACAATGAACATCTACTTTTGTTTCATCTGTTATAGATAGGGTAGTTCTCAGCTATGTTTACATTGAACCCAAGAGAACCGGTGAAGAGGGGGAGAAAATTCATGCCGCCATGAATAATGTTATACCAATGAAATTTGTTTCCCTTCTAAAAAAATAATACCACTATCTAATATGTGCTTCTTTTGTTTCAATATAAGTATCATTAATCAAATTTGACATCCGTGCGTCCATGCAAATTTAATACAGATCCTTGGTTGCCGTCAACCAAATATGGGATTTCTTTAGTTAATGAATAGCAGATAAAGGGTAACAGAAATGATTTAGTTTATTAAAAGCATATATTCAAGGCGAACTATTATAATGCAAGCTTACATCTTCATCTTGTAGGTTGCTAAATGAACTACTGCTGGTATCTGTCAAATCATGATCATCAAAGTCACTAGCACCATTAAAGTCCTCGTCTTCTGGATTCCATATATACCGACTCATGAAATAACTTGTATCATGTGGCTCTGCTGATGGTATAAACATGGCCTGTATTAAAAAATAAAAACTCCTTTTCAGATTCA AATAAAAGGGTATTTTAGGAAAAATAAATTAGGCTCAGCAGGGGGAGAAAGGGGAAATGGAACGAATCGTAGTCTTTCAATGAATAGGGCAGGCTTGTTGTGAACATTTCTCTAAAAAAGGTGGGTGAAGGTGGAGCTTCAACACTTTAGCTTAGGGAGCTTGCGTGATGGGAAGGCAGCCAGCCTTGTTGTGACAAACTTGGTGTCATGCTGAAAGACAACAAGCTTGTCACCTTCATCATCACCTATGGCCAGGCTCTCCCTAAGCTCACCAACCTCCTCCGTCGCTGCGGTAAGAGCTGTCGCCTCCAATGGACCAACTACCTCTGTCCCGACTTGAAGCACGGCCTCTTTGATGAAGCTGAAGAGCAATTGCTCGCCTCGCAACAGACTTCAGGATTCAGAAAACTGAGCACAGAAATTTCCAGTTGTTGGGAAGCAAAAGATGATGAAGATGGAGCAGCCAAATATGGTGTACATTCA ATGCTGAAAGACAACAAGCTTGTCACCTTCATCATCACCTATGGCCAGGCTCTCCCTAAGCTCACCAACCTCCTCCGTCGCTGCGGTAAGAGCTGTCGCCTCCAATGGACCAACTACCTCTGTCCCGACTTGAAGCACGGCCTCTTTGATGAAGCTGAAGAGCAATTGCTCGCCTCGCAACAGACTTCAGGATTCAGAAAACTGAGCACAGAAATTTCCAGTTGTTGGGAAGCAAAAGATGATGAAGATGGAGCAGCCAAATATGGTGTACATTCA MLKDNKLVTFIITYGQALPKLTNLLRRCGKSCRLQWTNYLCPDLKHGLFDEAEEQLLASQQTSGFRKLSTEISSCWEAKDDEDGAAKYGVHS Homology
BLAST of Cp4.1LG05g06950 vs. ExPASy Swiss-Prot
Match: Q50EX6 (MYB-like transcription factor ODO1 OS=Petunia hybrida OX=4102 GN=ODO1 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 6.1e-13 Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. ExPASy Swiss-Prot
Match: Q9C7U7 (Transcription factor MYB20 OS=Arabidopsis thaliana OX=3702 GN=MYB20 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.8e-12 Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. ExPASy Swiss-Prot
Match: P80073 (Myb-related protein Pp2 OS=Physcomitrium patens OX=3218 GN=PP2 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.1e-12 Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. ExPASy Swiss-Prot
Match: Q7XQN1 (Transcription factor MYB80 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB80 PE=2 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 6.7e-12 Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. ExPASy Swiss-Prot
Match: Q9XHV0 (Transcription factor MYB80 OS=Arabidopsis thaliana OX=3702 GN=MYB80 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.5e-11 Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. NCBI nr
Match: XP_023534692.1 (protein ODORANT1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 130 bits (328), Expect = 1.62e-37 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. NCBI nr
Match: KAG6605677.1 (Protein ODORANT1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 103 bits (257), Expect = 9.91e-26 Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. NCBI nr
Match: XP_022159685.1 (protein ODORANT1-like [Momordica charantia]) HSP 1 Score: 87.0 bits (214), Expect = 1.58e-18 Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. NCBI nr
Match: XP_038875719.1 (MYB-like transcription factor ODO1 [Benincasa hispida]) HSP 1 Score: 84.7 bits (208), Expect = 1.15e-17 Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. NCBI nr
Match: XP_022928784.1 (protein ODORANT1-like [Cucurbita moschata] >XP_022970227.1 protein ODORANT1-like [Cucurbita maxima]) HSP 1 Score: 83.6 bits (205), Expect = 3.44e-17 Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. ExPASy TrEMBL
Match: A0A6J1DZG0 (protein ODORANT1-like OS=Momordica charantia OX=3673 GN=LOC111026029 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 7.66e-19 Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. ExPASy TrEMBL
Match: A0A0A0KPP9 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G171690 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.30e-18 Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. ExPASy TrEMBL
Match: A0A6J1HYJ3 (protein ODORANT1-like OS=Cucurbita maxima OX=3661 GN=LOC111469176 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.66e-17 Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. ExPASy TrEMBL
Match: A0A6J1ELV1 (protein ODORANT1-like OS=Cucurbita moschata OX=3662 GN=LOC111435605 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.66e-17 Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. ExPASy TrEMBL
Match: A0A2U1NUB7 (Protein ODORANT1 OS=Artemisia annua OX=35608 GN=CTI12_AA226860 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.76e-17 Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. TAIR 10
Match: AT4G12350.1 (myb domain protein 42 ) HSP 1 Score: 76.6 bits (187), Expect = 1.1e-14 Identity = 38/59 (64.41%), Postives = 45/59 (76.27%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. TAIR 10
Match: AT1G66230.1 (myb domain protein 20 ) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13 Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. TAIR 10
Match: AT4G22680.1 (myb domain protein 85 ) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13 Identity = 43/93 (46.24%), Postives = 55/93 (59.14%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. TAIR 10
Match: AT5G16600.1 (myb domain protein 43 ) HSP 1 Score: 71.2 bits (173), Expect = 4.8e-13 Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 0
BLAST of Cp4.1LG05g06950 vs. TAIR 10
Match: AT5G56110.1 (myb domain protein 103 ) HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12 Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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