Cp4.1LG05g06030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g06030
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein BOBBER 1-like
Location	Cp4.1LG05: 3659305 .. 3663994 (+)
RNA-Seq Expression	Cp4.1LG05g06030
Synteny	Cp4.1LG05g06030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCACCCGCGATCTAGCGATTCTGCCAGCTTCTGCCCGCCATGGCGATTATCTCTGAATACGAAGAAAAGGAAGAAATCCCAAAGCCGAAGAAGCCTTCCTCCTCCTCCTCATCTCCACCGTCGTCTTCATCATCTAAGCCCTCTCAGTTCAGTGCCAACTTTGACCCTTCAAACCCTCTAGGGTTTTTAAACGAGGTTTTCGATTTTCTTGCCAAGGAGAGCGATTTTCTCTCCAGGGATAGAGTCGAGAAGGAAATCGAGACGGTAGTGCGTAGAGCTGTGGAGAAGAGAAAGAAGCACGTGGAGTCACTTGAGCTTAAAGGAAAGGCCGAGAAGAGGATAAAGGAAGAGGTGGGGAGTGTGAAGCAGGAAGCTGCGCCGGTGACTGTAAAGCAGGAGCCGAGGAATGTGGCATCACCGCCAGATGAGAAAGTGGATGTGAAGTTGGAGGAGAGCACCGAGGAGAAGAAAGAGGAGAATGGTCCAAGAGGTGAGCTTTCTTTTATTCCCCTCCCTTTCCTCTACTTGTTCGGTCTTCATTTTGTCATTTTTTTTAATTAACTGTCAATGATGCAGCCAACTGGCAAGGTTTTTAGCAATTAGACTGATGAAGTTGGCATTTTGATGTAAAATTATTGGTAGTTTATGGTTCTTTTTTTGAATAATTAATGGCTTTAGTTTGTAGTTAGCTAGTATTTACTTGGATATTAGGTTGTAGATTAATCCATTGATCCTCCATAAATTGAAAGTAGAGCTCTTCTGAGTTAGTTTTAGCTTCAGTCCCTTTAGGTACGTGTATTTCTTTGAGCGTGGTGATTGACTTTTAAGTTTCGAATTAAAGTATTTGGAGTTCACAAGTCGTGATCAACTTTTGTTGAGAAATTTGTATGGAAAATATGACTGCTCTCTGGGATGTGGAGTATAAATTTTATCCTCTTGAGTCGAGCATTATATTCTCTTCATGCAGTTTGATAGTTTTTGTCTTCTCGTTTGATAATGAATTTGCAGACGATGTCTGGAATTTGGAACTTAGTATGAAGCTTACCCTATCAAATTTATGAAATAAATCGTTGTTTCCTTGAGTTCAACTGCCTGACTGACCCTTTAATGATTATGGTTCATGTAACTTTGCCAATGCACATGGGAATATATTATGTTTCTATACTAAATGTTGCCTTTAACTTTGTTTCTTACCTATGGCATTGCAGTTCCCAACAATGGTAATGGCCTTGATATGGAAAACTACTGTTGGACACAGACCCTCCAAGAGGTCAACATTAATGTACCAGTACCCAAAGGAACTAAGTCCAGGTTTGTGGTGTGTGAGATCAAGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGTATGTTTGTTTGAAGCTGCTTGTTTCTGTTACAGATATATTTGCACAGTGTGTTTGTTTATTTATTTATTTATTTTTAAGTTCTGAATTATCGTCACATGCTTGCAGGGAGAGCTTTATCAGATCGTTAAGCCAGATGATTGTTATTGGAGCATAGGTATTTCTGGGTTTTGTTCACATAATAACAGTTCAAATAATCTTAAATTTTGTTATAAATATGGATTATTTTGATGTTGCTCAAGTCCTTGGAAATAGATGATAGCATAAATAGGAAGGGATGCATTGAGTTAGTTGAAAGCAGTTCCTTGTGTTCACTTGGGTATCAAAGTTACTGTTCTAACTATATTTTCATGTTTTATTTTGATACTTGTTGTAGAGGATCAGAGCGTCATCTCTATTCTATTGACCAAGCACAACCAAATGGAGTGGTGGAAGTATTTAGTTAAGGGGGAACCTGAGATTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACTGTCTGATTTGGATCCAGAGACTCGGCAAACAGTTGAAAAGATGATGGTTTGTATTTTGATCATCTATATTTTATCTATTACACTTATGATTTATTTGTATCAAGGTTTTCCTCGACATATACTCACGTGTTGTTTTTCTATTTCTTCTGCATAAAAATTGCATTTACATGTGCACAAATATGTAAAAAGAAAAAGCACGTTCTCAAATTTGATGTGGGAGGATAATTCATGAAGCACTTTTTCATGCATTAATGAAAGGTTACCTTCCATAGGTTATTATAAAAAGCTTATAAAAAACGTAAAAATCTATTCGCTCCCATTAGTAGTTTACAGAAAAATAGAAATCAAACCAAATGGGAACTGCATTGGGAGTATAGTCAGAATATGTGTGACTATTTCATAATGACTATTTCAATGAGATCAAATGAAAGAATGCTTAGGCTCAAAAAAACCAAGTCACCCACAAAAGGGAACCCTCTTAAGGAAGGGGCTTCAACTTCAAGGATTAGGAGTCCGACATTAGTATTATTTTTATTTATTTATTTATTTTTAAACAAGAAGTACTTTTTATTGCATTAGTGGAAAGTCATTAGTATTGTTTATAGACTCCAGCTAGGAGTTCACTAGAACCACCCCAATAAATGTGAATTCCTTCAGAAGTATGGTCACACGATCACAGGAAGAACTTGAAATCCACACCAAAAGGATAAATTGCATTTTGATTAGTCTATCATCTCCTCTACATATCAACACTTTCCCTTCAATTTCTCAGATTTCTGACCCCTGGAAAGAAGGAATCCTTCTTCTAGGATCTAGGTAGATGACTTGACTACTGGTGGAAGTATATTTGTAGAAACTCTACCAAGAGAGCACCACTTTGATACCAATTTCCCCTTAAAACTTGAAAATTTGTTGGCCATATCATTGAAACTTCTATCAGTTCTTTCAGTCCATATTTCCTGAACAATTCTAGGATTTACTTGACTGGGAAAACGAGTCCATGAATATCTTAATCTTTTTAGGAGCCTTGTATTCTTTTGTAGTTTTTTGGTCACAACTCATAACTCTAGGAATAACCTCCAATCGAAGGAAGACGTTGAACTTACAACTAGGTGACAATAGCCAAATGATTTGTACTTTTAGACCCTCTCCGTTCCTCTTATAGTGGATTATTAACTTCAAAGTTATTTTACTGCTGGTGAGAGAATGAACTTCAGGAAACTTGGCAAGATGATTTGTTGTTCAACCTAGTCCGCTGAAATCTAATTCTCCTCCCCATTCCGAAGGAAGGTGAAGTCTCAAGTATGTTCTTACTATGAGTCATGGAACTCAAGCTGCTTTGTAATAGAAACCAAATATATTGAAATATATAAGGTAACAATATTACAATAAAACCACCAAGTAAGTTGAGACACTTGAATCTCCTCTCTCTTCAGATACCTCTTAAGCTTAGACTCGCTGAACAATTTCTTACCTGCCTCCTTTTCCACCCCCTACTTTTATATCAAATCACCCTAACCATGCCTCTAACTAATTAGTCATATATCCGTAAACTCTAATAATAGTGCCACTTTCATCCTAATATCATTCCTATCACTTGGCAAACTACTACTTGATGGTCTAGTCTGGTAGTATTTCCAACCATAGTCATCATCTTACCACCAGCGCTTAACTGTCTGTAGCAATGGCACTAAGAATTAGTTTCTCCTCCAAACCACCACACATTGTAAGCTGTAGTTGTAGCTTTGATGTTGTTTCTATACCAAGAGACCCCCTTTAGAGTTGAAATGGAGGCAAGGACAATTTTTCAGTTTTCCTGACTCGATTATTGAAACTCCAAATCAGGCCCCTTCCTCAAAAATTTCTCAATGGATACGCCCTGGTTTTTAGATATAATAGGACATTTGTAAAGGGATGCTGATGATGCTAATAAATTCATGTTCATGAGGAAAATTTTATTTTATGATTGATCTATTAATTTCTTCAAATTATATACGTTTCCAGTAGACACCTCTCAATAAATCTAGACCTATGCCTGATTATGCTTTCTGGACTCCTGGCATTCAATGATTTTTTAAGTACATTCTTTGGTGGCATATTCTTATACATTGTTGGGTACGGTCACACAGTTTATATCTATATATATAAGAAACCAAATATCAATTCATTTTTCCTGATCGATTTGGAAAAATTTTACAGTTCGATCAAAGGCAGAAGTCTATGGGACTCCCAACCAGTGATGAGATGCAAAAGCAAGATATTCTGAAGAAGTTCATGGCTGAGGTGATTATTTGAGCTGTGTCCCTGTATGTGTTTGTGGTTTATAATATCTATTGCTTCTCTCTACTGACTCTGAAATTGATCCCATGCAGCATCCGGAGATGGATTTTTCGAGGGCAAAGATATCATAAATGGAAAATTTCTGCCTGATTTTACGTTATACAGATAAGAGAACCCAAAAGAAAATTTATAGTTTCTGTTCAGAGGTGGCAATTTTTATATTGCTTTTGGGAGGTTTGAATTCTCGAGTTTTTTCTTTTCTTTTTTAATGTTTAGGGGGAAATGAGGGTCTTTTCTAGATTATGGTGAGTAGTGTGATAACTCATCGTCTTTAATTCTTGAAACGGGATTTTGGTATGATGTATGTATGGAATCAAGTTAAACCATTTATTTTTCATTATAATTTAGATGGGCTTTCGGTGATGATTGGCAATAATCTATTTCAGCAAAGTTCGAAGTTATTCTTTCTGGGTTTATGGGTATGGATATATCTCAGCGAAAACCAAGTTGAGATCCATAGAGCTATGAGT

mRNA sequence

TATCACCCGCGATCTAGCGATTCTGCCAGCTTCTGCCCGCCATGGCGATTATCTCTGAATACGAAGAAAAGGAAGAAATCCCAAAGCCGAAGAAGCCTTCCTCCTCCTCCTCATCTCCACCGTCGTCTTCATCATCTAAGCCCTCTCAGTTCAGTGCCAACTTTGACCCTTCAAACCCTCTAGGGTTTTTAAACGAGGTTTTCGATTTTCTTGCCAAGGAGAGCGATTTTCTCTCCAGGGATAGAGTCGAGAAGGAAATCGAGACGGTAGTGCGTAGAGCTGTGGAGAAGAGAAAGAAGCACGTGGAGTCACTTGAGCTTAAAGGAAAGGCCGAGAAGAGGATAAAGGAAGAGGTGGGGAGTGTGAAGCAGGAAGCTGCGCCGGTGACTGTAAAGCAGGAGCCGAGGAATGTGGCATCACCGCCAGATGAGAAAGTGGATGTGAAGTTGGAGGAGAGCACCGAGGAGAAGAAAGAGGAGAATGGTCCAAGAGTTCCCAACAATGGTAATGGCCTTGATATGGAAAACTACTGTTGGACACAGACCCTCCAAGAGGTCAACATTAATGTACCAGTACCCAAAGGAACTAAGTCCAGGTTTGTGGTGTGTGAGATCAAGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGGAGAGCTTTATCAGATCGTTAAGCCAGATGATTGTTATTGGAGCATAGAGGATCAGAGCGTCATCTCTATTCTATTGACCAAGCACAACCAAATGGAGTGGTGGAAGTATTTAGTTAAGGGGGAACCTGAGATTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACTGTCTGATTTGGATCCAGAGACTCGGCAAACAGTTGAAAAGATGATGTTCGATCAAAGGCAGAAGTCTATGGGACTCCCAACCAGTGATGAGATGCAAAAGCAAGATATTCTGAAGAAGTTCATGGCTGAGCATCCGGAGATGGATTTTTCGAGGGCAAAGATATCATAAATGGAAAATTTCTGCCTGATTTTACGTTATACAGATAAGAGAACCCAAAAGAAAATTTATAGTTTCTGTTCAGAGGTGGCAATTTTTATATTGCTTTTGGGAGGTTTGAATTCTCGAGTTTTTTCTTTTCTTTTTTAATGTTTAGGGGGAAATGAGGGTCTTTTCTAGATTATGGTGAGTAGTGTGATAACTCATCGTCTTTAATTCTTGAAACGGGATTTTGGTATGATGTATGTATGGAATCAAGTTAAACCATTTATTTTTCATTATAATTTAGATGGGCTTTCGGTGATGATTGGCAATAATCTATTTCAGCAAAGTTCGAAGTTATTCTTTCTGGGTTTATGGGTATGGATATATCTCAGCGAAAACCAAGTTGAGATCCATAGAGCTATGAGT

Coding sequence (CDS)

ATGGCGATTATCTCTGAATACGAAGAAAAGGAAGAAATCCCAAAGCCGAAGAAGCCTTCCTCCTCCTCCTCATCTCCACCGTCGTCTTCATCATCTAAGCCCTCTCAGTTCAGTGCCAACTTTGACCCTTCAAACCCTCTAGGGTTTTTAAACGAGGTTTTCGATTTTCTTGCCAAGGAGAGCGATTTTCTCTCCAGGGATAGAGTCGAGAAGGAAATCGAGACGGTAGTGCGTAGAGCTGTGGAGAAGAGAAAGAAGCACGTGGAGTCACTTGAGCTTAAAGGAAAGGCCGAGAAGAGGATAAAGGAAGAGGTGGGGAGTGTGAAGCAGGAAGCTGCGCCGGTGACTGTAAAGCAGGAGCCGAGGAATGTGGCATCACCGCCAGATGAGAAAGTGGATGTGAAGTTGGAGGAGAGCACCGAGGAGAAGAAAGAGGAGAATGGTCCAAGAGTTCCCAACAATGGTAATGGCCTTGATATGGAAAACTACTGTTGGACACAGACCCTCCAAGAGGTCAACATTAATGTACCAGTACCCAAAGGAACTAAGTCCAGGTTTGTGGTGTGTGAGATCAAGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGGAGAGCTTTATCAGATCGTTAAGCCAGATGATTGTTATTGGAGCATAGAGGATCAGAGCGTCATCTCTATTCTATTGACCAAGCACAACCAAATGGAGTGGTGGAAGTATTTAGTTAAGGGGGAACCTGAGATTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACTGTCTGATTTGGATCCAGAGACTCGGCAAACAGTTGAAAAGATGATGTTCGATCAAAGGCAGAAGTCTATGGGACTCCCAACCAGTGATGAGATGCAAAAGCAAGATATTCTGAAGAAGTTCATGGCTGAGCATCCGGAGATGGATTTTTCGAGGGCAAAGATATCATAA

Protein sequence

MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQEPRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQMEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQDILKKFMAEHPEMDFSRAKIS

Homology

[Close]

BLAST of Cp4.1LG05g06030 vs. ExPASy Swiss-Prot
Match: Q9LV09 (Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 3.5e-92
Identity = 194/326 (59.51%), Postives = 228/326 (69.94%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPS--QFSANFDPSNPLGFLNEVFDFLA 60
           MAIISE EE+                  SSSS+P    F A    +NPLGFL +VFDFL 
Sbjct: 1   MAIISEVEEE------------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLG 60

Query: 61  KESDFLSRDRVEKEIETVVRRAVEK----RKKHVESLELKGKAEKRIKEEVGSVKQEAAP 120
           ++SDFL +   E EI   VR A EK     KK  E   +K   +K  KE V  V+++   
Sbjct: 61  EQSDFLKKPSAEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEK 120

Query: 121 VTVKQEPRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNI 180
            +VK     +A+   E ++V+  +  EEKK E+GP VPN GNG D+ENY W Q LQEV +
Sbjct: 121 ESVKP---TIAASSAEPIEVEKPKEEEEKK-ESGPIVPNKGNGTDLENYSWIQNLQEVTV 180

Query: 181 NVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILL 240
           N+PVP GTK+R VVCEIKKN LKVGLKGQ P++DGELY+ VKPDDCYW+IEDQ VISILL
Sbjct: 181 NIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILL 240

Query: 241 TKHNQMEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSD 300
           TK +QMEWWK  VKGEPEIDTQKVEPE SKL DLDPETR TVEKMMFDQRQK MGLPTS+
Sbjct: 241 TKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSE 300

Query: 301 EMQKQDILKKFMAEHPEMDFSRAKIS 321
           E+QKQ+ILKKFM+EHPEMDFS AK +
Sbjct: 301 ELQKQEILKKFMSEHPEMDFSNAKFN 304

[Close]

BLAST of Cp4.1LG05g06030 vs. ExPASy Swiss-Prot
Match: Q9STN7 (Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 6.0e-84
Identity = 175/322 (54.35%), Postives = 224/322 (69.57%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQ--FSANFDPSNPLGFLNEVFDFLA 60
           MAIISE EE                      ++PS   F+A+FDPSNP+ FL +V D + 
Sbjct: 1   MAIISEMEE----------------------ARPSMVPFTASFDPSNPIAFLEKVLDVIG 60

Query: 61  KESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVK 120
           KES+FL +D  EKEI   V  A ++R +  E  +L+ ++ K +  EV   K+++   T  
Sbjct: 61  KESNFLKKDTAEKEIVAAV-MAAKQRLREAEKKKLEKESVKSM--EVEKPKKDSLKPTEL 120

Query: 121 QEPRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPV 180
           ++P+  +    + +++  E+  EEK  E+GP VPN GNGLD E Y W Q LQEV IN+P+
Sbjct: 121 EKPKEESLMATDPMEI--EKPKEEK--ESGPIVPNKGNGLDFEKYSWGQNLQEVTINIPM 180

Query: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHN 240
           P+GTKSR V CEIKKN LKVGLKGQ  ++DGE +  VKPDDC+W+IEDQ +IS+LLTK +
Sbjct: 181 PEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFWNIEDQKMISVLLTKQD 240

Query: 241 QMEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300
           QMEWWKY VKGEPEIDTQKVEPE SKL DLDPETR +VEKMMFDQRQK MGLP SDE++K
Sbjct: 241 QMEWWKYCVKGEPEIDTQKVEPETSKLGDLDPETRASVEKMMFDQRQKQMGLPRSDEIEK 293

Query: 301 QDILKKFMAEHPEMDFSRAKIS 321
           +D+LKKFMA++P MDFS AK +
Sbjct: 301 KDMLKKFMAQNPGMDFSNAKFN 293

[Close]

BLAST of Cp4.1LG05g06030 vs. ExPASy Swiss-Prot
Match: Q9Y266 (Nuclear migration protein nudC OS=Homo sapiens OX=9606 GN=NUDC PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.5e-55
Identity = 130/308 (42.21%), Postives = 179/308 (58.12%), Query Frame = 0


Query: 50  LNEVFDFLAKESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVK 109
           +N  F FL +++DF          E +  + + +   H   L  K + EKR ++E    +
Sbjct: 29  VNTFFSFLRRKTDFFIGGE-----EGMAEKLITQTFSHHNQLAQKTRREKRARQEAERRE 88

Query: 110 QEAAPVTVKQEPRNVASPP-----------------DEKVDVK----------------- 169
           +      + +E ++  S P                 D+K D +                 
Sbjct: 89  KAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKDAENHEAQLKNGSLDSPGKQ 148

Query: 170 -LEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVP--VPKGTKSRFVVCEIK 229
             EE  EE +++ G   PN GNG D+ NY WTQTL E+++ VP  V    K + +V +I+
Sbjct: 149 DTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQ 208

Query: 230 KNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQMEWWKYLVKGEPE 289
           + HL+VGLKGQP +IDGELY  VK ++  W IED  V+++ L K N+MEWW  LV  +PE
Sbjct: 209 RRHLRVGLKGQPAIIDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPE 268

Query: 290 IDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQDILKKFMAEHPEM 321
           I+T+K+ PENSKLSDLD ETR  VEKMM+DQRQKSMGLPTSDE +KQ+ILKKFM +HPEM
Sbjct: 269 INTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEM 328

[Close]

BLAST of Cp4.1LG05g06030 vs. ExPASy Swiss-Prot
Match: O35685 (Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.5e-55
Identity = 133/309 (43.04%), Postives = 177/309 (57.28%), Query Frame = 0


Query: 50  LNEVFDFLAKESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEV-GSV 109
           +N  F FL +++DF          E +  + + +   H   L  K + EKR ++E     
Sbjct: 29  VNTFFSFLRRKTDFFIGGE-----EGMAEKLITQTFNHHNQLAQKARREKRARQETERRE 88

Query: 110 KQEAAPVTVKQEPRNVASPP----------------DEKVDVK----------------- 169
           K E A    K+       P                 D+K D +                 
Sbjct: 89  KAERAARLAKEAKAETPGPQIKELTDEEAERLQLEIDQKKDAEDQEAQLKNGSLDSPGKQ 148

Query: 170 --LEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVP--VPKGTKSRFVVCEI 229
              +E  EE +++ G   PN GNG D+ NY WTQTL E+++ VP  V    K + VV +I
Sbjct: 149 DAEDEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDI 208

Query: 230 KKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQMEWWKYLVKGEP 289
           ++ HL+VGLKGQPPV+DGELY  VK ++  W IED  V+++ L K N+MEWW  LV  +P
Sbjct: 209 QRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDP 268

Query: 290 EIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQDILKKFMAEHPE 321
           EI+T+K+ PENSKLSDLD ETR  VEKMM+DQRQKSMGLPTSDE +KQ+ILKKFM +HPE
Sbjct: 269 EINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPE 328

[Close]

BLAST of Cp4.1LG05g06030 vs. ExPASy Swiss-Prot
Match: Q5ZIN1 (Nuclear migration protein nudC OS=Gallus gallus OX=9031 GN=NUDC PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.0e-54
Identity = 134/308 (43.51%), Postives = 186/308 (60.39%), Query Frame = 0


Query: 50  LNEVFDFLAKESDFLS--RDRVEKEI-----------------ETVVRRAVEKRKKHVES 109
           +N  F FL +++DF +   D V +++                 E   R+  E+R+K   +
Sbjct: 34  VNTFFSFLRRKTDFFTGGEDGVAEKLITDSFNHHNKLAQKERKEKKARQEAERREKAERA 93

Query: 110 LELKGKA-----EKRIKE---------EVGSVKQEAAPVTVKQEPRNVASPPDEKVDVKL 169
            +L  +A     E RIKE         ++   +++ A   V   P   +    +  D   
Sbjct: 94  AKLAKEAKQEANEPRIKELTDEEAERLQLEIDQKKEAQKEVNNVPVKSSEDDGDSSDSNK 153

Query: 170 EESTEEKKEEN--GPRVPNNGNGLDMENYCWTQTLQEVNINVP--VPKGTKSRFVVCEIK 229
           +E+ +E+K+EN  G   PN GNG D+ NY WTQTL E+++ +P  V    K + VV +I+
Sbjct: 154 QETDDEEKDENDKGKLKPNAGNGADLPNYRWTQTLSELDLAIPFKVTFRLKGKDVVVDIQ 213

Query: 230 KNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQMEWWKYLVKGEPE 289
           +  L+VGLKG PPVIDGEL+  VK ++  W IED   +++ L K N+MEWW  LV  +PE
Sbjct: 214 RRRLRVGLKGHPPVIDGELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPE 273

Query: 290 IDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQDILKKFMAEHPEM 321
           I+T+K+ PENSKLSDLD ETR  VEKMM+DQRQKSMGLPTSDE +KQDILKKFM +HPEM
Sbjct: 274 INTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEM 333

[Close]

BLAST of Cp4.1LG05g06030 vs. NCBI nr
Match: XP_023534559.1 (protein BOBBER 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 612 bits (1577), Expect = 2.74e-220
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQE 120
           SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQE
Sbjct: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQE 120

Query: 121 PRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVPK 180
           PRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVPK
Sbjct: 121 PRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVPK 180

Query: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240
           GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM
Sbjct: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240

Query: 241 EWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300
           EWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD
Sbjct: 241 EWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300

Query: 301 ILKKFMAEHPEMDFSRAKIS 320
           ILKKFMAEHPEMDFSRAKIS
Sbjct: 301 ILKKFMAEHPEMDFSRAKIS 320

[Close]

BLAST of Cp4.1LG05g06030 vs. NCBI nr
Match: XP_022995953.1 (protein BOBBER 1-like [Cucurbita maxima])

HSP 1 Score: 607 bits (1565), Expect = 1.85e-218
Identity = 316/320 (98.75%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQE 120
           SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ+
Sbjct: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120

Query: 121 PRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVPK 180
           PRNVASPP+EKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQ+LQEVNINVPVPK
Sbjct: 121 PRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVPK 180

Query: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240
           GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM
Sbjct: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240

Query: 241 EWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300
           EWWKYL+KGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD
Sbjct: 241 EWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300

Query: 301 ILKKFMAEHPEMDFSRAKIS 320
           ILKKFMAEHPEMDFSRAKIS
Sbjct: 301 ILKKFMAEHPEMDFSRAKIS 320

[Close]

BLAST of Cp4.1LG05g06030 vs. NCBI nr
Match: KAG7035749.1 (Protein BOBBER 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 605 bits (1561), Expect = 7.80e-218
Identity = 319/321 (99.38%), Postives = 320/321 (99.69%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSS-PPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60
           MAIISEYEEKEEIPKPKKPSSSSSS PPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120
           ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 EPRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180
           EPRNVASPP+EKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP
Sbjct: 121 EPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240
           KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240

Query: 241 MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 DILKKFMAEHPEMDFSRAKIS 320
           DILKKFMAEHPEMDFSRAKIS
Sbjct: 301 DILKKFMAEHPEMDFSRAKIS 321

[Close]

BLAST of Cp4.1LG05g06030 vs. NCBI nr
Match: KAG6605783.1 (Protein BOBBER 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 599 bits (1544), Expect = 3.04e-215
Identity = 316/321 (98.44%), Postives = 318/321 (99.07%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSS-PPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60
           MAIISEYEEKEEIPKPKKPSSSSSS PPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120
           ESDFLSRDRVEKEIETVVRRAVEKRKKHVES+ELKGKAEKRIKEEVGSVKQEAAPVTVKQ
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESIELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 EPRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180
           EPRNVASP + KVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP
Sbjct: 121 EPRNVASPSEGKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240
           KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240

Query: 241 MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 DILKKFMAEHPEMDFSRAKIS 320
           DILKKFMAEHPEMDFSRAKIS
Sbjct: 301 DILKKFMAEHPEMDFSRAKIS 321

[Close]

BLAST of Cp4.1LG05g06030 vs. NCBI nr
Match: XP_022958496.1 (protein BOBBER 1-like [Cucurbita moschata])

HSP 1 Score: 596 bits (1536), Expect = 5.04e-214
Identity = 315/321 (98.13%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSP-PSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60
           MAIISEYEEKEEIPKPKKPSSSSSS  PSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSSAPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120
           ESDFLSRDRVEKEIETVVRRAVEKRKKHVES+ELKGKAEKRIKEEVGSVKQEAAPVTVKQ
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESIELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 EPRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180
           EPRNVASP + KVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP
Sbjct: 121 EPRNVASPSEGKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240
           KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240

Query: 241 MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 DILKKFMAEHPEMDFSRAKIS 320
           DILKKFMAEHPEMDFSRAKIS
Sbjct: 301 DILKKFMAEHPEMDFSRAKIS 321

[Close]

BLAST of Cp4.1LG05g06030 vs. ExPASy TrEMBL
Match: A0A6J1K9G4 (protein BOBBER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491313 PE=4 SV=1)

HSP 1 Score: 607 bits (1565), Expect = 8.94e-219
Identity = 316/320 (98.75%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQE 120
           SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ+
Sbjct: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQD 120

Query: 121 PRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVPK 180
           PRNVASPP+EKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQ+LQEVNINVPVPK
Sbjct: 121 PRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVPK 180

Query: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240
           GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM
Sbjct: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240

Query: 241 EWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300
           EWWKYL+KGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD
Sbjct: 241 EWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300

Query: 301 ILKKFMAEHPEMDFSRAKIS 320
           ILKKFMAEHPEMDFSRAKIS
Sbjct: 301 ILKKFMAEHPEMDFSRAKIS 320

[Close]

BLAST of Cp4.1LG05g06030 vs. ExPASy TrEMBL
Match: A0A6J1H279 (protein BOBBER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459706 PE=4 SV=1)

HSP 1 Score: 596 bits (1536), Expect = 2.44e-214
Identity = 315/321 (98.13%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSP-PSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60
           MAIISEYEEKEEIPKPKKPSSSSSS  PSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSSAPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120
           ESDFLSRDRVEKEIETVVRRAVEKRKKHVES+ELKGKAEKRIKEEVGSVKQEAAPVTVKQ
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESIELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 EPRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180
           EPRNVASP + KVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP
Sbjct: 121 EPRNVASPSEGKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240
           KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240

Query: 241 MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 DILKKFMAEHPEMDFSRAKIS 320
           DILKKFMAEHPEMDFSRAKIS
Sbjct: 301 DILKKFMAEHPEMDFSRAKIS 321

[Close]

BLAST of Cp4.1LG05g06030 vs. ExPASy TrEMBL
Match: A0A5A7TGM4 (Protein BOBBER 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00490 PE=4 SV=1)

HSP 1 Score: 525 bits (1352), Expect = 1.97e-186
Identity = 278/320 (86.88%), Postives = 296/320 (92.50%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS+YEEKEEIPKPK+PSSSSS P SSSS+KPSQF+ANFDPSNPLGFL +VFDFLA E
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSS-PSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQE 120
           +DFLS DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVKQEAAP      
Sbjct: 61  TDFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPA----- 120

Query: 121 PRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVPK 180
            + VASPP+EKV  KLEE TEEKKE+NGPRVPN GNGLDM+NY WTQ+LQEVN+NVPVPK
Sbjct: 121 -KAVASPPEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPK 180

Query: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240
           GTKSRFVVCEIKKN LKVGLKGQPPVIDGEL   VKPDDCYWSIED+S+ISILLTKHNQM
Sbjct: 181 GTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQM 240

Query: 241 EWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300
           EWWKYLVKG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ+
Sbjct: 241 EWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQE 300

Query: 301 ILKKFMAEHPEMDFSRAKIS 320
           ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 ILKKFMSEHPEMDFSRAKIS 313

[Close]

BLAST of Cp4.1LG05g06030 vs. ExPASy TrEMBL
Match: A0A1S3AUE5 (protein BOBBER 1 OS=Cucumis melo OX=3656 GN=LOC103482963 PE=4 SV=1)

HSP 1 Score: 525 bits (1352), Expect = 1.97e-186
Identity = 278/320 (86.88%), Postives = 296/320 (92.50%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAKE 60
           MAIIS+YEEKEEIPKPK+PSSSSS P SSSS+KPSQF+ANFDPSNPLGFL +VFDFLA E
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSS-PSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANE 60

Query: 61  SDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQE 120
           +DFLS DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVKQEAAP      
Sbjct: 61  TDFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPA----- 120

Query: 121 PRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVPK 180
            + VASPP+EKV  KLEE TEEKKE+NGPRVPN GNGLDM+NY WTQ+LQEVN+NVPVPK
Sbjct: 121 -KAVASPPEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPK 180

Query: 181 GTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQM 240
           GTKSRFVVCEIKKN LKVGLKGQPPVIDGEL   VKPDDCYWSIED+S+ISILLTKHNQM
Sbjct: 181 GTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQM 240

Query: 241 EWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQD 300
           EWWKYLVKG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ+
Sbjct: 241 EWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQE 300

Query: 301 ILKKFMAEHPEMDFSRAKIS 320
           ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 ILKKFMSEHPEMDFSRAKIS 313

[Close]

BLAST of Cp4.1LG05g06030 vs. ExPASy TrEMBL
Match: A0A0A0KQ62 (CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139440 PE=4 SV=1)

HSP 1 Score: 522 bits (1345), Expect = 2.46e-185
Identity = 277/321 (86.29%), Postives = 297/321 (92.52%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSS-KPSQFSANFDPSNPLGFLNEVFDFLAK 60
           MAIIS+YEEKEEIPKPKKPSSSSSS PSSSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120

Query: 121 EPRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180
             +  ASPP+EKV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQ+LQEVN+NVPVP
Sbjct: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180

Query: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSIED+S++SILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQ 240

Query: 241 MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYLVKG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 DILKKFMAEHPEMDFSRAKIS 320
           +ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 EILKKFMSEHPEMDFSRAKIS 315

[Close]

BLAST of Cp4.1LG05g06030 vs. TAIR 10
Match: AT5G53400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 339.7 bits (870), Expect = 2.5e-93
Identity = 194/326 (59.51%), Postives = 228/326 (69.94%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPS--QFSANFDPSNPLGFLNEVFDFLA 60
           MAIISE EE+                  SSSS+P    F A    +NPLGFL +VFDFL 
Sbjct: 1   MAIISEVEEE------------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLG 60

Query: 61  KESDFLSRDRVEKEIETVVRRAVEK----RKKHVESLELKGKAEKRIKEEVGSVKQEAAP 120
           ++SDFL +   E EI   VR A EK     KK  E   +K   +K  KE V  V+++   
Sbjct: 61  EQSDFLKKPSAEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEK 120

Query: 121 VTVKQEPRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNI 180
            +VK     +A+   E ++V+  +  EEKK E+GP VPN GNG D+ENY W Q LQEV +
Sbjct: 121 ESVKP---TIAASSAEPIEVEKPKEEEEKK-ESGPIVPNKGNGTDLENYSWIQNLQEVTV 180

Query: 181 NVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILL 240
           N+PVP GTK+R VVCEIKKN LKVGLKGQ P++DGELY+ VKPDDCYW+IEDQ VISILL
Sbjct: 181 NIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILL 240

Query: 241 TKHNQMEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSD 300
           TK +QMEWWK  VKGEPEIDTQKVEPE SKL DLDPETR TVEKMMFDQRQK MGLPTS+
Sbjct: 241 TKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSE 300

Query: 301 EMQKQDILKKFMAEHPEMDFSRAKIS 321
           E+QKQ+ILKKFM+EHPEMDFS AK +
Sbjct: 301 ELQKQEILKKFMSEHPEMDFSNAKFN 304

[Close]

BLAST of Cp4.1LG05g06030 vs. TAIR 10
Match: AT4G27890.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 312.4 bits (799), Expect = 4.3e-85
Identity = 175/322 (54.35%), Postives = 224/322 (69.57%), Query Frame = 0


Query: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSSKPSQ--FSANFDPSNPLGFLNEVFDFLA 60
           MAIISE EE                      ++PS   F+A+FDPSNP+ FL +V D + 
Sbjct: 1   MAIISEMEE----------------------ARPSMVPFTASFDPSNPIAFLEKVLDVIG 60

Query: 61  KESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVK 120
           KES+FL +D  EKEI   V  A ++R +  E  +L+ ++ K +  EV   K+++   T  
Sbjct: 61  KESNFLKKDTAEKEIVAAV-MAAKQRLREAEKKKLEKESVKSM--EVEKPKKDSLKPTEL 120

Query: 121 QEPRNVASPPDEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPV 180
           ++P+  +    + +++  E+  EEK  E+GP VPN GNGLD E Y W Q LQEV IN+P+
Sbjct: 121 EKPKEESLMATDPMEI--EKPKEEK--ESGPIVPNKGNGLDFEKYSWGQNLQEVTINIPM 180

Query: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHN 240
           P+GTKSR V CEIKKN LKVGLKGQ  ++DGE +  VKPDDC+W+IEDQ +IS+LLTK +
Sbjct: 181 PEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFWNIEDQKMISVLLTKQD 240

Query: 241 QMEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300
           QMEWWKY VKGEPEIDTQKVEPE SKL DLDPETR +VEKMMFDQRQK MGLP SDE++K
Sbjct: 241 QMEWWKYCVKGEPEIDTQKVEPETSKLGDLDPETRASVEKMMFDQRQKQMGLPRSDEIEK 293

Query: 301 QDILKKFMAEHPEMDFSRAKIS 321
           +D+LKKFMA++P MDFS AK +
Sbjct: 301 KDMLKKFMAQNPGMDFSNAKFN 293

[Close]

BLAST of Cp4.1LG05g06030 vs. TAIR 10
Match: AT5G58740.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 4.4e-13
Identity = 42/156 (26.92%), Postives = 74/156 (47.44%), Query Frame = 0


Query: 165 WTQTLQEVNINVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSI 224
           W QTL+EVN+ + +P     +   C+I+  H++VG+KG PP ++ +L   VK D  +W++
Sbjct: 23  WDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKGNPPYLNHDLSAPVKTDCSFWTL 82

Query: 225 EDQSVISILLTKHNQMEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQR 284
           ED  ++ I L K  + + W   + G+ ++D    + E                       
Sbjct: 83  ED-DIMHITLQKREKGQTWASPILGQGQLDPYATDLE----------------------- 142

Query: 285 QKSMGLPTSDEMQKQDILKKFMAEHPEMDFSRAKIS 321
                       QK+ +L++F  E+P  DFS+A+ S
Sbjct: 143 ------------QKRLMLQRFQEENPGFDFSQAQFS 142

[Close]

BLAST of Cp4.1LG05g06030 vs. TAIR 10
Match: AT2G27280.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-07
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 37 FSANFDPSNPLGFLNEVFDFLAKESDFLSRDRVEKEIETVVRRAVEK---RKKHVESLEL 95
          FSA+F+PSNPLGFL  V DF+ KES+FL +D  EKEI   V  A E+    +K  ES+++
Sbjct: 11 FSASFNPSNPLGFLENVLDFIGKESNFLRKDTAEKEITDAVTTAKERLRETEKKTESMDV 70

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g06030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV09	3.5e-92	59.51	Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1	[more]
Q9STN7	6.0e-84	54.35	Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1	[more]
Q9Y266	4.5e-55	42.21	Nuclear migration protein nudC OS=Homo sapiens OX=9606 GN=NUDC PE=1 SV=1	[more]
O35685	4.5e-55	43.04	Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1	[more]
Q5ZIN1	1.0e-54	43.51	Nuclear migration protein nudC OS=Gallus gallus OX=9031 GN=NUDC PE=2 SV=1	[more]

BLAST of Cp4.1LG05g06030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534559.1	2.74e-220	100.00	protein BOBBER 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022995953.1	1.85e-218	98.75	protein BOBBER 1-like [Cucurbita maxima]	[more]
KAG7035749.1	7.80e-218	99.38	Protein BOBBER 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6605783.1	3.04e-215	98.44	Protein BOBBER 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022958496.1	5.04e-214	98.13	protein BOBBER 1-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG05g06030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K9G4	8.94e-219	98.75	protein BOBBER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491313 PE=4 SV=1	[more]
A0A6J1H279	2.44e-214	98.13	protein BOBBER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459706 PE=4 SV=1	[more]
A0A5A7TGM4	1.97e-186	86.88	Protein BOBBER 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G004...	[more]
A0A1S3AUE5	1.97e-186	86.88	protein BOBBER 1 OS=Cucumis melo OX=3656 GN=LOC103482963 PE=4 SV=1	[more]
A0A0A0KQ62	2.46e-185	86.29	CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139440 PE=4 SV=...	[more]

BLAST of Cp4.1LG05g06030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53400.1	2.5e-93	59.51	HSP20-like chaperones superfamily protein	[more]
AT4G27890.1	4.3e-85	54.35	HSP20-like chaperones superfamily protein	[more]
AT5G58740.1	4.4e-13	26.92	HSP20-like chaperones superfamily protein	[more]
AT2G27280.1	1.2e-07	50.82	Coiled-coil domain-containing protein 55 (DUF2040)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 66..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..42
None	No IPR available	PANTHER	PTHR12356:SF3	NUCLEAR MIGRATION PROTEIN NUDC	coord: 28..320
None	No IPR available	CDD	cd06467	p23_NUDC_like	coord: 163..247 e-value: 1.35241E-39 score: 132.286
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 154..281 e-value: 3.3E-46 score: 158.5
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 149..262
IPR007052	CS domain	PFAM	PF04969	CS	coord: 162..236 e-value: 1.9E-20 score: 73.7
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 158..247 score: 17.486742
IPR037898	NudC family	PANTHER	PTHR12356	NUCLEAR MOVEMENT PROTEIN NUDC	coord: 28..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g06030.1	Cp4.1LG05g06030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051082	unfolded protein binding