Cp4.1LG05g05370 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g05370
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	oligoribonuclease
Location	Cp4.1LG05: 3212474 .. 3218532 (-)
RNA-Seq Expression	Cp4.1LG05g05370
Synteny	Cp4.1LG05g05370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACAAGAGGGAGACCTTAGTCATTCGGGCGGCAAGATTTGGGGGCAGAGAGAGAGAGAGAGCAATGGAGCCGTTCGTGAATGCGTTCTCAGTATTGGAGCTCGATGCTGAAGACGATCAAGTTCGTCCTCCTTCTACTTTCTCCAAAGACGAGGCTGCCGCTTCTTCCTCTTCAAGAACAGGTTGATTTAGTTATGATGCGATTTAGGGTGTTCTTCTCGTTATCAAGTGTCACATTTTACAGGTGCAAGGTTGAAGGTTCTGAGAACTTCAGGAGTTCGATTAGATTAGATTACCTTCCCCGTTGATCGCTTAGAGTGCATTAAGAATTAGGTTCAGGTAGTTTCTTCGGAAAATTGAAGTGATACAATAAGAATCGATTGTTCTGTTTGCCCAGTTTTGAGTTCCGCGGCATTGTGGACATTAACAAGGCTGAAGATTTGATTCTATCTTCGACTTCTGAATTTAAGCTGCCAATTTGAGCTTTCGACTCAATAATAATTGAAAAAATTGGCTTTTAGGAAACGATGTAGCTTTACGATCAGGCTTTTCATTGTCACTTGTTGTGTCGTTGATGTAGATTAGACCCCCGAGACCCCACGACATGGTAGTTGTGGGTTTCGTTACTTCCTGGTTTTACGCAATGCATTACACGGTAGCTTTGTTCAATTTCAAGCTTGGAATGATGCTATTGTTTTGCAATTTGATATGTTAAGTTTTACCCTTATGTCTCTGATGAAATTGTTCATTTTTTTGGGTCAGTATTTTCCTGCGATTATTCCTTGTTGATCCCCCACGGCAGACATGGATATTTCATCGATATTTCGCACATAATACGTAGTTATTTTTCTTGATTTTTCTCCCTGTTGGTTTTTTACTGAATTAATCTTTCAAGCAATATATGTTGTAGTAATCCATCTTCTTAGTATGGATATTACCATTGACGTTTCATGCATAGTGAATAGGATACAGTTCTTTTAAGTGTGGTTAACGGTTGTGGGTATTTATTTTTCTATTGTAAATTCCTCCCATCTAATCCTTGAAAAAAAGTAGAACATGACCCTGTGGTGTGGTTTGATTAATTGAATCAGGAAAAAGCAAGAAGGAAAACATCTCTGGTGATATTCTGATGGGAGAAAGACAGAAACAAAGTCAACCAGATGTAGCTGCAGAAGACTACAAGTTTCCACTTGTTTGGATTGACCTGGAAATGACTGGTAACTAACAAGTATTAACTAGCCCATATGCTTTAAGCTTGTAAAACGTGGATTGAAGAGTGGGAGTAGATTATAGCTATAAGAAACCCCCTCGTTTTGGGGTTTTATCATTAAATATTGAAATCAAGTCCAACGGAATTTAAAAATTTATATTTGCCCGGGGTTGAATGGACTGGATATTCAACATATTACCTATAATTTTTTTTTTCTGTTACTTTTTAATGGAAGTGTTTGCTCCTTACAATTCTTTTGTCTTCTTCTGTGGCAATGGGATGACTTATTTTTCTGTAACTTTCTCCACACACACCCTAAAAAGAAAAAAAAGAAAAGAAGAAAAAGAAACTATAACCCTTCTAGCTTCCTCAAAACATATATCCTATGGTTTCTCTTTATGGAAATAAGAATATATCCTATGGTTTTTCTTTATTGAGAAGATAGATTCTATAAGTTTAAGTGAAGGCCAAGACAGGCTGGGGTGGGTGAATAATCCCATGGGAGACATCACCACCAGATCGACTTTTCTCCATATTGCAAAGAAAAGTCACAGACTGAAAGCTCATATGGTGAGAAAACACGGTTGAAAAGCTCTAGAAATAGTTCCCAAATTGATCTTTGCCCCCTTGGGTTGTAGCTTATGTCTAAAACAGATGGAATCCTTATATCATATTTTCCTTCACAACCCATATGCTTCTAATGGTTGGATTTGGTTGTTGGGAGAGTTTGGTTTGTCCTACTGCTTATTGAACAGAAATGACAATTGGCTGGTAGAATGTTTGACTGGTAGTTGTTTTAAGAACCGGGCTAATATTTTGTGGCAATGTGCAGTTAGAGCCTTTGTCTTGCTGCTGTGGTTATATCATAGGGTTGTTAGTCCCACGTTCTTAGCAATGTGGAAGCCAAAATTCTTGTTAGACTTGAGTTTGACACTATTTACCATTCCATGCAACATCTTTGGCTAGAAAAGAAGGCCTAATCATTGTTGGTTGATAATATCCTGGCTATTTGAAAAGATGACGAGAGCAGCCTATAAAACATTTGGGATGGGGAATTAAAGATTAATGCCTCTAACAGGGCTTTCTTTCCAAAGAATTTTAAAACTGTTCATTTGTGTGTGCTAATGTGACTGTTGAGATCTGTTTCCAATCTCTTTTTTGCCTTCTTCTCCTTAGAATTTTTATCCTCCACACTTTTGTACTTGTTTTTTAGGTCGATACCTTCCTTTACTTATTTAAGATGCTGAATTCATAATTTCTAATGGTATTTTTTCTCTGTTTGACTTACTATGCAGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCTTGTATAATTACCAATGGAAGTCTGACCAAATTGGTTGAGGTATCTTTGCTATTGGTTATTCAATTGTGTTTTCCATGAATGCATTTGCCCCCGTTTGTTTGTGTCATTGAATTTTATGCCTTCTTTGACTTCCCTACACCATTGACAAATACTTGTCACTGTTCATCATTGGTTATCTTATTTATGTTTGTCAATAATTTCCTTTCATCAATGAAGTAACGAAAGAAACACAATATTTTCCGATAAGGTCGAACAAAATACAATGCAGTTTTGACAAGAAACCTGACTCAATATATCAGCGTCAGTCTTTGCAAATGCCTAAAACAAACAAGAGAAGTTCAAAAGTTGCAACCTTAGTCTCATCGCTTCTTTGTGTTTCGATTTCTATTTTATGTTTCCAGGGTCCTCATCTAGTTATTCACCAATCAAAAGAATGTCTTGAAAAAATGGGAGAATGGTGTCAAAGTCATCACGCAGCCAGTGGTAAGAACCAACAAGCTTAATCAATATACCACTTCATTGTATATTCATGGCTTCTGGCTTTCTGCCTTACTTTTTTTCTTGTGGATGAAACAAATTGTTATATTACACTGTCGTTATTCAGGATTGACAAAAAAAGTGCTACAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTGTGTAAAAATTTATCTAATGCTAGGCTCCTCCCCTCTTGATGCAATTTTTTTTTATTCGTATCCTTAATTCATAAATTTAAGTCATTTGATGTACGTATTATTGTGATAAATTTTGCGGTGCCTTGCGGCCACACAAAAAATAATCATAAATACAGATAGGTCAAGAATCCTGCAATGAATGAACTTGGTAACTTATAATAATAAACAACATAAAAAATAAGCGTTTCTTGTCTATAATCTGGTTTTAATGATAATGACAACGTTAATTTGAATCTTTATTTCATCTTCTTCATAATACCATCATCTCCCAGACCTTAGTTTGAAGGTCTTACTTCATGTTTAAGCACAGATGCACATTAGTTGTACAAGGGAGGGAAAGCACCCCACAACCAGGCGGTTATTAGAAGGCTTCCCACTAGTTAATTATAGGGGGAAAAAAAGTTTGACCAGCTGCCTCAAAATAATAATAATAGATAAATAAAATACAAGTGTGTGCAAAAATGCTTGGATCCTATAGCTCATCCCTTAGCGTATCATTCCTTTGGATTACTACTCTATTTTCTCAATCCAAAGATTTCTAAGAACTATACAGACACCACCCACGCTCTCATTTTAAAATTATGATGAGGAAGAGTAGACTGACGAAGTCTTCCTTTATGAGAAACCAACTATCATTACTGACTGACAATCCATACATCCTTAATGGTTTTGTTTTTACGATGAAGAAAATCCATCAATTTCTGCAACATAGCTGCTAGGGAAACAATTCCATCCAGCAATCCTCCGAAACCAGATCATAGAGCCATGTCCAATAGACATTTTTCTAAGGATGTAGTTGAATGATCTTGGTTGAAAACAAAGTCAACGGCTTTTGAAAGATCTGTAACTATACTTTTTAGTGATTACCAACAGTATCATAAATGTGTATGTAATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTCAAATTTTATGCAATAACATTTGTAATTTGCAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATACTCTACATTTGGCTGGAAATTCAGTCTATGTGGATTTTATTTTTTTGAAGGTAGTCCCACAGCAATATTCTTTATTTTCTCACAATTTAACGTAATTGTATCTTTGGTTTGAATTAATTTATTGTGTTATATAAAGTAAACGTCTGAGTTTAGTCAATATGTCAATATACATTTTTATATAATTTATTTATGCACTCAACTGTTTCTTGTCTTTTTGGGGCTTGCATTTGATGCTTTCTCCTGGGTTATCTGTTCTTTAGAATCTTTTTGTTGCTTTCACTGTCCTAAATAAAGGTCGTGTTATCTTGAAAATGAAAATTGTTTATTATTTAATATTCAATGATATCTTCACTTTAGTAAGTTTTACATGTGTGATATGTCTAATTTATTTGCATTATTGAATAAGCTTAATGGTTTTCGTTGATATGTGGTTATATTTTCCACCCCTTTTGAGAACAAATACTGGTTTGCAATGTCTTTCGTCCTAACGACCTGTTTTATTCCCTTCAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCACGTACTTGTTGACGTCAGTAGTGTTAAGGCTCTATGCTTTCGCTGGTTTCCAAGAGGTAAAAAGATGTTGATGGTTTTAGAGCAAAATGACAAGCATGCTGTTCTTAATTCTCTGTTTCATATTAAAAATAAGAAACACATTATTTCCTTGCACTTGTTCCTCTGTAATTGCAAACCTCGACCAGTATTCTTGTTCAAATTAGAAACCCTTTATGTCAATTGCGACTAAATTGATCACGTTACTTATTGTCTCATGGGATTCCGAGTTAATAGCCATCTAAATATCATCTCTGAAAGATATTTAGGAGGCTTGTTAGATTTTAGTGGCATTACACTCTTCGATCAAACATTTACTTGATTCATAGGACGATTGTGCCAACTTGAGAATAGAACTGACATAAAATATATTTGATCATTGGGTCAGAAGTATGAATCTCCCATCCTATATTTTTTTCTAAAAAGAAAACAGGAACAATCGTTTTGAGAATTTTAATGGAAATCTCGCAGCTGCTTATGATGTCTTAGGAATCTGTAGCCTTTTTGTAGACTGTTGATCAATAAAACCAAACATAGACTCACCTTGCAACATTTGGTTATTGAATTACTTGAGCATACATCAACAACTCATTTCCTTTCCAGATCAGAAGAAAGCTCCACCGAAGGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATACTACAAGGAAAATATATTTAAGAAGCCTAAAAAGTGACGCAGGAGGAGGAGGAGGCACCACAACCACAAGACTACATGTCTGTACGGTACGCGGAGGTTTTACTTTAAAATTCCAATCTACCATTCATCTCCTTGTTCAATTGTATATGATGAAAGCTCTTTAGCTGAAACAGTTATCTAAATCTATCTATTATTTGATTGTAGTTGCTGGATTCATTGCTTGGAGAGCCTTCATGGTATCAAATACATTGTGTTGATTGATTAACTGCTTGCTGGATTCATTGCTTGGAGAGCCTCCATGGTATCTAATACATTGTGTTCATTAACTGCTTTCAAATCCAAACATACTTGCGGATCCAAGAGTTTGTAGATCATCTATGTTAGAATTTATTTTCTTTATATTCTATTGGGTATATATAATTTAATCTTTTATCTATTTGAAATGGTCACTTGTTCGATGCCATTACTATATGTTTCTATAAACTATTTTTTTCTCCGTGTTATCTTGTATATAGCTCAACTCGTTAAAAAATTGATATCTCTTTGAACGAATAG

mRNA sequence

CGACAAGAGGGAGACCTTAGTCATTCGGGCGGCAAGATTTGGGGGCAGAGAGAGAGAGAGAGCAATGGAGCCGTTCGTGAATGCGTTCTCAGTATTGGAGCTCGATGCTGAAGACGATCAAGTTCGTCCTCCTTCTACTTTCTCCAAAGACGAGGCTGCCGCTTCTTCCTCTTCAAGAACAGGAAAAAGCAAGAAGGAAAACATCTCTGGTGATATTCTGATGGGAGAAAGACAGAAACAAAGTCAACCAGATGTAGCTGCAGAAGACTACAAGTTTCCACTTGTTTGGATTGACCTGGAAATGACTGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCTTGTATAATTACCAATGGAAGTCTGACCAAATTGGTTGAGGGTCCTCATCTAGTTATTCACCAATCAAAAGAATGTCTTGAAAAAATGGGAGAATGGTGTCAAAGTCATCACGCAGCCAGTGGATTGACAAAAAAAGTGCTACAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATACTCTACATTTGGCTGGAAATTCAGTCTATGTGGATTTTATTTTTTTGAAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCACGTACTTGTTGACGTCAGTAGTGTTAAGGCTCTATGCTTTCGCTGGTTTCCAAGAGATCAGAAGAAAGCTCCACCGAAGGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATACTACAAGGAAAATATATTTAAGAAGCCTAAAAAGTGACGCAGGAGGAGGAGGAGGCACCACAACCACAAGACTACATGTCTGTACGTTGCTGGATTCATTGCTTGGAGAGCCTTCATGGTATCAAATACATTGTGTTGATTGATTAACTGCTTGCTGGATTCATTGCTTGGAGAGCCTCCATGGTATCTAATACATTGTGTTCATTAACTGCTTTCAAATCCAAACATACTTGCGGATCCAAGAGTTTGTAGATCATCTATGTTAGAATTTATTTTCTTTATATTCTATTGGGTATATATAATTTAATCTTTTATCTATTTGAAATGGTCACTTGTTCGATGCCATTACTATATGTTTCTATAAACTATTTTTTTCTCCGTGTTATCTTGTATATAGCTCAACTCGTTAAAAAATTGATATCTCTTTGAACGAATAG

Coding sequence (CDS)

ATGGAGCCGTTCGTGAATGCGTTCTCAGTATTGGAGCTCGATGCTGAAGACGATCAAGTTCGTCCTCCTTCTACTTTCTCCAAAGACGAGGCTGCCGCTTCTTCCTCTTCAAGAACAGGAAAAAGCAAGAAGGAAAACATCTCTGGTGATATTCTGATGGGAGAAAGACAGAAACAAAGTCAACCAGATGTAGCTGCAGAAGACTACAAGTTTCCACTTGTTTGGATTGACCTGGAAATGACTGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCTTGTATAATTACCAATGGAAGTCTGACCAAATTGGTTGAGGGTCCTCATCTAGTTATTCACCAATCAAAAGAATGTCTTGAAAAAATGGGAGAATGGTGTCAAAGTCATCACGCAGCCAGTGGATTGACAAAAAAAGTGCTACAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATACTCTACATTTGGCTGGAAATTCAGTCTATGTGGATTTTATTTTTTTGAAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCACGTACTTGTTGACGTCAGTAGTGTTAAGGCTCTATGCTTTCGCTGGTTTCCAAGAGATCAGAAGAAAGCTCCACCGAAGGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATACTACAAGGAAAATATATTTAAGAAGCCTAAAAAGTGA

Protein sequence

MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQSQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKKPKK

Homology

[Close]

BLAST of Cp4.1LG05g05370 vs. ExPASy Swiss-Prot
Match: Q9ZVE0 (Oligoribonuclease OS=Arabidopsis thaliana OX=3702 GN=At2g26970 PE=2 SV=2)

HSP 1 Score: 296.6 bits (758), Expect = 2.7e-79
Identity = 157/246 (63.82%), Postives = 185/246 (75.20%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQS 60
           M    NAFSVL              F+ ++A  +SSS TGK ++E+++G +  G      
Sbjct: 1   MNKLSNAFSVL-------------AFADEDAPMASSSSTGK-QEESVNGSLEDG------ 60

Query: 61  QPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL 120
                  DYK PLVWIDLEMTGLNVE DRILEIACIITNG LT+ VEGP LV+ Q+K+CL
Sbjct: 61  -------DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCL 120

Query: 121 EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF 180
           +KM +WCQ+HH ASGLTKKVL S I+EREAE++VIEFVKKHVGS    LAGNSVYVDF+F
Sbjct: 121 DKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLF 180

Query: 181 LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY 240
           LKKYMP+LA LF H+LVDVSSVKALC RWFP +++KAP K+N HRAMDDIRESI ELKYY
Sbjct: 181 LKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKYY 219

Query: 241 KENIFK 247
           K+ IFK
Sbjct: 241 KKTIFK 219

[Close]

BLAST of Cp4.1LG05g05370 vs. ExPASy Swiss-Prot
Match: Q9Y3B8 (Oligoribonuclease, mitochondrial OS=Homo sapiens OX=9606 GN=REXO2 PE=1 SV=3)

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-46
Identity = 90/183 (49.18%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 65  AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKMG 124
           A E     +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M 
Sbjct: 35  AGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMS 94

Query: 125 EWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKKY 184
           +WC+ HH  SGLTK V +STI+ ++AE + + FV++        LAGNSV+ D  FL KY
Sbjct: 95  DWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKY 154

Query: 185 MPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKENI 244
           MP       + ++DVS+VK LC RW+P + + AP K   HRA+DDI ESI EL++Y+ NI
Sbjct: 155 MPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNI 214

Query: 245 FKK 248
           FKK
Sbjct: 215 FKK 217

[Close]

BLAST of Cp4.1LG05g05370 vs. ExPASy Swiss-Prot
Match: Q9D8S4 (Oligoribonuclease, mitochondrial OS=Mus musculus OX=10090 GN=Rexo2 PE=1 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-46
Identity = 89/183 (48.63%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 65  AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKMG 124
           A E     +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M 
Sbjct: 35  AGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMS 94

Query: 125 EWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKKY 184
           +WC+ HH  SGLTK V +ST++ ++AE + + FV++        LAGNSV+ D  FL K+
Sbjct: 95  DWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKH 154

Query: 185 MPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKENI 244
           MP       + ++DVS+VK LC RW+P D + AP K   HRA+DDI ESI EL++Y+ NI
Sbjct: 155 MPQFMKHLHYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNI 214

Query: 245 FKK 248
           FKK
Sbjct: 215 FKK 217

[Close]

BLAST of Cp4.1LG05g05370 vs. ExPASy Swiss-Prot
Match: Q5U1X1 (Oligoribonuclease, mitochondrial OS=Rattus norvegicus OX=10116 GN=Rexo2 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-46
Identity = 89/183 (48.63%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 65  AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKMG 124
           A E     +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M 
Sbjct: 35  AGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMS 94

Query: 125 EWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKKY 184
           +WC+ HH  SGLTK V +ST++ ++AE + + FV++        LAGNSV+ D  FL K+
Sbjct: 95  DWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKH 154

Query: 185 MPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKENI 244
           MP       + ++DVS+VK LC RW+P D + AP K   HRA+DDI ESI EL++Y+ NI
Sbjct: 155 MPQFMKHLHYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNI 214

Query: 245 FKK 248
           FKK
Sbjct: 215 FKK 217

[Close]

BLAST of Cp4.1LG05g05370 vs. ExPASy Swiss-Prot
Match: A2VE52 (Oligoribonuclease, mitochondrial OS=Bos taurus OX=9913 GN=REXO2 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.0e-46
Identity = 89/183 (48.63%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 65  AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKMG 124
           A E     +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M 
Sbjct: 35  AGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMS 94

Query: 125 EWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKKY 184
           +WC+ HH  SGLTK V +ST++ ++AE + + FV++        LAGNSV+ D  FL KY
Sbjct: 95  DWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKY 154

Query: 185 MPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKENI 244
           MP       + ++DVS+VK LC RW+P + + AP K   HRA+DDI ESI EL++Y+ NI
Sbjct: 155 MPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNI 214

Query: 245 FKK 248
           FKK
Sbjct: 215 FKK 217

[Close]

BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: XP_023533182.1 (oligoribonuclease [Cucurbita pepo subsp. pepo] >XP_023533183.1 oligoribonuclease [Cucurbita pepo subsp. pepo] >XP_023533185.1 oligoribonuclease [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496 bits (1277), Expect = 6.55e-177
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQS 60
           MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQS
Sbjct: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQS 60

Query: 61  QPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL 120
           QPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL
Sbjct: 61  QPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL 120

Query: 121 EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF 180
           EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF
Sbjct: 121 EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF 180

Query: 181 LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY 240
           LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY
Sbjct: 181 LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY 240

Query: 241 KENIFKKPKK 250
           KENIFKKPKK
Sbjct: 241 KENIFKKPKK 250

[Close]

BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: XP_022957669.1 (oligoribonuclease [Cucurbita moschata] >KAG6605859.1 Oligoribonuclease, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035809.1 Oligoribonuclease [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 489 bits (1258), Expect = 5.35e-174
Identity = 248/251 (98.80%), Postives = 249/251 (99.20%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQ 60
           MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE NISGDILMG+RQKQ
Sbjct: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60

Query: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
           SQPD AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC
Sbjct: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI
Sbjct: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY
Sbjct: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240

Query: 241 YKENIFKKPKK 250
           YKENIFKKPKK
Sbjct: 241 YKENIFKKPKK 251

[Close]

BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: XP_022996309.1 (oligoribonuclease [Cucurbita maxima])

HSP 1 Score: 484 bits (1245), Expect = 5.13e-172
Identity = 246/251 (98.01%), Postives = 247/251 (98.41%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQ 60
           MEPFVNAFSVLELDAEDDQV PPSTFSKDE AASSSSRTGKSKKE NISGDILMGERQKQ
Sbjct: 1   MEPFVNAFSVLELDAEDDQVCPPSTFSKDEGAASSSSRTGKSKKEVNISGDILMGERQKQ 60

Query: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
           SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC
Sbjct: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVI+FVKKHVGSYTLHLAGNSVYVDF 
Sbjct: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIDFVKKHVGSYTLHLAGNSVYVDFT 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY
Sbjct: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240

Query: 241 YKENIFKKPKK 250
           YKENIFKKPKK
Sbjct: 241 YKENIFKKPKK 251

[Close]

BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: XP_038902868.1 (oligoribonuclease isoform X1 [Benincasa hispida] >XP_038902870.1 oligoribonuclease isoform X1 [Benincasa hispida])

HSP 1 Score: 447 bits (1149), Expect = 2.37e-157
Identity = 228/251 (90.84%), Postives = 237/251 (94.42%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQ 60
           M+P VNAFSVLELDAEDDQ+   ST SKD+A ASS SRTGKSKKE NISGDIL GE+QKQ
Sbjct: 3   MKPLVNAFSVLELDAEDDQIPALSTSSKDDATASSPSRTGKSKKEVNISGDILTGEKQKQ 62

Query: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
            QPDVAAE+YKFPLVWIDLEMTGL+VETDRILEIACIITNGSLTKLVEGP LVIHQSKEC
Sbjct: 63  GQPDVAAENYKFPLVWIDLEMTGLHVETDRILEIACIITNGSLTKLVEGPDLVIHQSKEC 122

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSY LHLAGNSVY+DFI
Sbjct: 123 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFI 182

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALCFRW+PRDQKKAPPKENKHRAMDDIRESIMELKY
Sbjct: 183 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKY 242

Query: 241 YKENIFKKPKK 250
           YK+NIFK  KK
Sbjct: 243 YKDNIFKNSKK 253

[Close]

BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: XP_022153842.1 (oligoribonuclease isoform X1 [Momordica charantia] >XP_022153844.1 oligoribonuclease isoform X1 [Momordica charantia])

HSP 1 Score: 421 bits (1081), Expect = 5.07e-147
Identity = 218/251 (86.85%), Postives = 230/251 (91.63%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQ 60
           M+  VNAFSVLELDAEDDQ+   STFSK +A ASSSS+TGKSKKE +ISGDI  GERQKQ
Sbjct: 1   MQSLVNAFSVLELDAEDDQIPALSTFSKPDATASSSSKTGKSKKEVDISGDIPTGERQKQ 60

Query: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
           S  DVAAEDYK PLVWIDLEMTGLNVETDRILEIACI+TNG+LTKL EGP LVIHQSKEC
Sbjct: 61  SLLDVAAEDYKLPLVWIDLEMTGLNVETDRILEIACIVTNGNLTKLAEGPDLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQ+HHAASGLTKKVL+STISEREAEKQVIEFVKK+VGSYT  LAGNSVY DFI
Sbjct: 121 LEKMGEWCQTHHAASGLTKKVLRSTISEREAEKQVIEFVKKYVGSYTPLLAGNSVYTDFI 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALC RW+P+DQKKAP KENKHRAMDDIRESIMELKY
Sbjct: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCCRWYPKDQKKAPHKENKHRAMDDIRESIMELKY 240

Query: 241 YKENIFKKPKK 250
           YKENIFKK KK
Sbjct: 241 YKENIFKKSKK 251

[Close]

BLAST of Cp4.1LG05g05370 vs. ExPASy TrEMBL
Match: A0A6J1H2M6 (oligoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111459134 PE=3 SV=1)

HSP 1 Score: 489 bits (1258), Expect = 2.59e-174
Identity = 248/251 (98.80%), Postives = 249/251 (99.20%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQ 60
           MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE NISGDILMG+RQKQ
Sbjct: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60

Query: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
           SQPD AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC
Sbjct: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI
Sbjct: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY
Sbjct: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240

Query: 241 YKENIFKKPKK 250
           YKENIFKKPKK
Sbjct: 241 YKENIFKKPKK 251

[Close]

BLAST of Cp4.1LG05g05370 vs. ExPASy TrEMBL
Match: A0A6J1K8C8 (oligoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111491575 PE=3 SV=1)

HSP 1 Score: 484 bits (1245), Expect = 2.49e-172
Identity = 246/251 (98.01%), Postives = 247/251 (98.41%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQ 60
           MEPFVNAFSVLELDAEDDQV PPSTFSKDE AASSSSRTGKSKKE NISGDILMGERQKQ
Sbjct: 1   MEPFVNAFSVLELDAEDDQVCPPSTFSKDEGAASSSSRTGKSKKEVNISGDILMGERQKQ 60

Query: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
           SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC
Sbjct: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVI+FVKKHVGSYTLHLAGNSVYVDF 
Sbjct: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIDFVKKHVGSYTLHLAGNSVYVDFT 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY
Sbjct: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240

Query: 241 YKENIFKKPKK 250
           YKENIFKKPKK
Sbjct: 241 YKENIFKKPKK 251

[Close]

BLAST of Cp4.1LG05g05370 vs. ExPASy TrEMBL
Match: A0A6J1DKA2 (oligoribonuclease isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021263 PE=3 SV=1)

HSP 1 Score: 421 bits (1081), Expect = 2.45e-147
Identity = 218/251 (86.85%), Postives = 230/251 (91.63%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQ 60
           M+  VNAFSVLELDAEDDQ+   STFSK +A ASSSS+TGKSKKE +ISGDI  GERQKQ
Sbjct: 1   MQSLVNAFSVLELDAEDDQIPALSTFSKPDATASSSSKTGKSKKEVDISGDIPTGERQKQ 60

Query: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
           S  DVAAEDYK PLVWIDLEMTGLNVETDRILEIACI+TNG+LTKL EGP LVIHQSKEC
Sbjct: 61  SLLDVAAEDYKLPLVWIDLEMTGLNVETDRILEIACIVTNGNLTKLAEGPDLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQ+HHAASGLTKKVL+STISEREAEKQVIEFVKK+VGSYT  LAGNSVY DFI
Sbjct: 121 LEKMGEWCQTHHAASGLTKKVLRSTISEREAEKQVIEFVKKYVGSYTPLLAGNSVYTDFI 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALC RW+P+DQKKAP KENKHRAMDDIRESIMELKY
Sbjct: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCCRWYPKDQKKAPHKENKHRAMDDIRESIMELKY 240

Query: 241 YKENIFKKPKK 250
           YKENIFKK KK
Sbjct: 241 YKENIFKKSKK 251

[Close]

BLAST of Cp4.1LG05g05370 vs. ExPASy TrEMBL
Match: A0A1S3BNX4 (oligoribonuclease OS=Cucumis melo OX=3656 GN=LOC103491603 PE=3 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 2.16e-146
Identity = 216/250 (86.40%), Postives = 225/250 (90.00%), Query Frame = 0


Query: 2   EPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQS 61
           +P VNAFSVLELDAEDDQ+   ST SKD+A  S SS TGKSKKE NISGDI  GERQKQ 
Sbjct: 4   KPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQKQG 63

Query: 62  QPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL 121
           QP+  AEDYKFPLVWIDLEMTGLNVETDRILEIACIITNG+LTKLVEGP LVIHQSKECL
Sbjct: 64  QPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECL 123

Query: 122 EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF 181
           EKMGEWCQSHHAASGLTKKV +STISEREAEKQVIEFVKKHV    LHLAGNSVY+DFIF
Sbjct: 124 EKMGEWCQSHHAASGLTKKVQRSTISEREAEKQVIEFVKKHVCCDKLHLAGNSVYMDFIF 183

Query: 182 LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY 241
           LKKYMPDLAGLFSHVLVDVSSVK LC RW+PRD+KKAPPKENKHRAMDDIRESIMELKYY
Sbjct: 184 LKKYMPDLAGLFSHVLVDVSSVKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYY 243

Query: 242 KENIFKKPKK 250
           KENIFK  KK
Sbjct: 244 KENIFKNSKK 253

[Close]

BLAST of Cp4.1LG05g05370 vs. ExPASy TrEMBL
Match: A0A0A0KZ28 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G279830 PE=3 SV=1)

HSP 1 Score: 418 bits (1074), Expect = 3.07e-146
Identity = 213/251 (84.86%), Postives = 227/251 (90.44%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQ 60
           M+P VNAFS+LELDAEDDQ+   ST SKD+A  S  S TGK KKE NISGDIL GERQKQ
Sbjct: 3   MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQ 62

Query: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
            QP+  AEDYKFPLVWIDLEMTGLNVETDRILEIACIITNG+LTKLVEGP LVIHQSKEC
Sbjct: 63  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKEC 122

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           L+KMGEWCQSHHAASGLTKKVL+STISEREAEKQVI+FVKKHV +  LHLAGNSVY+DFI
Sbjct: 123 LDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFI 182

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSS+K LC RW+PRD+KKAPPKENKHRAMDDIRESIMELKY
Sbjct: 183 FLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKY 242

Query: 241 YKENIFKKPKK 250
           YKENIFK  KK
Sbjct: 243 YKENIFKNSKK 253

[Close]

BLAST of Cp4.1LG05g05370 vs. TAIR 10
Match: AT2G26970.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 296.6 bits (758), Expect = 1.9e-80
Identity = 157/246 (63.82%), Postives = 185/246 (75.20%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQS 60
           M    NAFSVL              F+ ++A  +SSS TGK ++E+++G +  G      
Sbjct: 1   MNKLSNAFSVL-------------AFADEDAPMASSSSTGK-QEESVNGSLEDG------ 60

Query: 61  QPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL 120
                  DYK PLVWIDLEMTGLNVE DRILEIACIITNG LT+ VEGP LV+ Q+K+CL
Sbjct: 61  -------DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCL 120

Query: 121 EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF 180
           +KM +WCQ+HH ASGLTKKVL S I+EREAE++VIEFVKKHVGS    LAGNSVYVDF+F
Sbjct: 121 DKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLF 180

Query: 181 LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY 240
           LKKYMP+LA LF H+LVDVSSVKALC RWFP +++KAP K+N HRAMDDIRESI ELKYY
Sbjct: 181 LKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKYY 219

Query: 241 KENIFK 247
           K+ IFK
Sbjct: 241 KKTIFK 219

[Close]

BLAST of Cp4.1LG05g05370 vs. TAIR 10
Match: AT2G26970.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 290.8 bits (743), Expect = 1.0e-78
Identity = 155/246 (63.01%), Postives = 181/246 (73.58%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQS 60
           M    NAFSVL              F+ ++A  +SSS T     E+++G +  G      
Sbjct: 1   MNKLSNAFSVL-------------AFADEDAPMASSSST-----ESVNGSLEDG------ 60

Query: 61  QPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL 120
                  DYK PLVWIDLEMTGLNVE DRILEIACIITNG LT+ VEGP LV+ Q+K+CL
Sbjct: 61  -------DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCL 120

Query: 121 EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF 180
           +KM +WCQ+HH ASGLTKKVL S I+EREAE++VIEFVKKHVGS    LAGNSVYVDF+F
Sbjct: 121 DKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLF 180

Query: 181 LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY 240
           LKKYMP+LA LF H+LVDVSSVKALC RWFP +++KAP K+N HRAMDDIRESI ELKYY
Sbjct: 181 LKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKYY 215

Query: 241 KENIFK 247
           K+ IFK
Sbjct: 241 KKTIFK 215

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g05370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVE0	2.7e-79	63.82	Oligoribonuclease OS=Arabidopsis thaliana OX=3702 GN=At2g26970 PE=2 SV=2	[more]
Q9Y3B8	2.3e-46	49.18	Oligoribonuclease, mitochondrial OS=Homo sapiens OX=9606 GN=REXO2 PE=1 SV=3	[more]
Q9D8S4	2.3e-46	48.63	Oligoribonuclease, mitochondrial OS=Mus musculus OX=10090 GN=Rexo2 PE=1 SV=2	[more]
Q5U1X1	2.3e-46	48.63	Oligoribonuclease, mitochondrial OS=Rattus norvegicus OX=10116 GN=Rexo2 PE=2 SV=...	[more]
A2VE52	3.0e-46	48.63	Oligoribonuclease, mitochondrial OS=Bos taurus OX=9913 GN=REXO2 PE=2 SV=1	[more]

BLAST of Cp4.1LG05g05370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023533182.1	6.55e-177	100.00	oligoribonuclease [Cucurbita pepo subsp. pepo] >XP_023533183.1 oligoribonuclease...	[more]
XP_022957669.1	5.35e-174	98.80	oligoribonuclease [Cucurbita moschata] >KAG6605859.1 Oligoribonuclease, partial ...	[more]
XP_022996309.1	5.13e-172	98.01	oligoribonuclease [Cucurbita maxima]	[more]
XP_038902868.1	2.37e-157	90.84	oligoribonuclease isoform X1 [Benincasa hispida] >XP_038902870.1 oligoribonuclea...	[more]
XP_022153842.1	5.07e-147	86.85	oligoribonuclease isoform X1 [Momordica charantia] >XP_022153844.1 oligoribonucl...	[more]

BLAST of Cp4.1LG05g05370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2M6	2.59e-174	98.80	oligoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111459134 PE=3 SV=1	[more]
A0A6J1K8C8	2.49e-172	98.01	oligoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111491575 PE=3 SV=1	[more]
A0A6J1DKA2	2.45e-147	86.85	oligoribonuclease isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021263 PE=3...	[more]
A0A1S3BNX4	2.16e-146	86.40	oligoribonuclease OS=Cucumis melo OX=3656 GN=LOC103491603 PE=3 SV=1	[more]
A0A0A0KZ28	3.07e-146	84.86	Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G279830...	[more]

BLAST of Cp4.1LG05g05370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26970.1	1.9e-80	63.82	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G26970.2	1.0e-78	63.01	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 72..246 e-value: 4.0E-27 score: 106.1
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 74..235 e-value: 6.1E-32 score: 111.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 65..249 e-value: 1.8E-72 score: 244.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..42
None	No IPR available	PANTHER	PTHR11046:SF18	OLIGORIBONUCLEASE-LIKE	coord: 1..249
IPR022894	Oligoribonuclease	PANTHER	PTHR11046	OLIGORIBONUCLEASE, MITOCHONDRIAL	coord: 1..249
IPR022894	Oligoribonuclease	CDD	cd06135	Orn	coord: 73..245 e-value: 2.49621E-103 score: 295.224
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 71..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g05370.1	Cp4.1LG05g05370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding