Cp4.1LG05g05030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCCATTATTCCTGTTTATCTTACATACTGGTTTATCCTTAACTTATGCTTCCACTCCTTCTATATCCCCTATGCTTCCTAAAACTATATCATTTAATTTGCTTCACTTTTCATTCAATCTTTCATTTTTATTCTTCCAACTCAAACCTTTTCTCTTCCTTCCTTCAATATTGTATTACATGCGTGTGTATATTGTTATACGATGAAAGTCCCAGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGTATAACCTCTCATGACTTTGCTTTGGGCTCCCCAAAAAAATTCTACCAATTGAGAGAATATGATCATTCCCTACATTAGCTGATGTGGGACTTTCATCATCCAACATAGGGAATGATCACGGGTTCATTGGTAGGAGGCATTTGGGGAAGCCCATAGGGAATGATCATGGGTTTTTATAATCAATGAATACTCTCTTCATTGGTATGAAGCCTTTAAAGCAGCCCATAGAGGGAATGATCATGAGTTTATAATCAATAAATACTCTCTCCATCCATTGGTACGAGGCCTTTAGGGAAGCCCGGAATGATCATGAGTTTATAATCAAGGAATTCTCTCTTCATTCGTACACGAGGCCTTTGGAAAGCCAAAGCAAAGCAATGAGTGCTTATAAACAAAGTGACAATATTGGTAGTCGTATTCGTCTAACAAGAAAAAAAAGAAATTAAAATAAGTTGGGCGTGGGTTGATTCTAAACAACCAATAGAAAGAAGGCACGTGGATAAGAGGGTTCTGTGCTTGATATAATCCATTTTATTAACTACAGCGTTGTAAGCCTATACACGGGCAGAGAGAAGAAAACGCTCTCTTTCTCTCTCTTCTCTCTGGCTCTGCTTCTATTTCCTCAGTGATTCTAAAACTGTTCAGGTTAGGTTTTCAAATTCCTTCCTCTATTTGCGCCAATTTGTTTGGATTACATCTTAATTTTTCTGTTTTTAGTGATTACTCCCGAGTAATTCCACTTCGCCTCTGATTTCCTTTTGTCGTTTCTTATATATTTTATATTCGTTAGAAGCCGGGGTTTAATTTCCATGGGATTCTGAGTTCTTCGATCGAGCATAAAGATTCGTCTATCAGAGATATCTATCGTCAGGTTAGGGCTTATGTTCTGTACCTCGTGTTGGTTTCACTGAATACTCCTATTGAACTATGATGTTCAGTTGTTGTATATGAACAGAGTGGAGCTCTGGGTAACTCTTATAGACTTCTAATATTGTGATTTTGGGTTTCCCTGTTAGTGTTCGGAGGCAGTTAGGTTTTTTTATTGCCTACTGATTAGTGTTCGTGGTTTTGCCAGACTGTGGATTCCATCGAAACATATTAATTTTTTTTTTTCATGTGATTCTATCTGGTGATTGTATTAGAAGTCTCGTATGAACGTTCTCTTGTGCAATTCGAATACTAGAAATGCGGAACACGTGAGAACGGTTGTGAAATTTAGCTTTAAATCACTAGAGCGAGACAGTCCCTTTGTTCTCCTTTAAACAGTCCTCTCTCGGTTAACCATTTCAACTAGGAAAACCACCCCTCTGTCTTAACTAACATCTTGTGCATAAATTTCATGTGGAAGGCAAAGTAAGGTTTAAGAATTCCTCAACACAGGATGGATGAGGGGGCTTTAATGAGGATGGAACTTAGGCTTCTTGACTTCCATTTTATCTTTTCCTACTTACCAGTCTCACTCTCGATAGTATCAACTCAACTGCTTAAAAGCATGTCCCTTTGCTGAAAGATGAATGTGGCAGAATAATTGGTGGTTCAAAGATTTAAATATGGTGAATATTTGTTCAATGATCTGTTGTTTTGGCTAAACTTAGTATTCAATATCTAAACTACAAGTCAAATTTGTTTTCTTTAGAAATTGATCCAACTATTTATTTCAAGTTTATTTGGCACGGCTTGCATCAGGCACCGCAGCCAACCGCCACCATCTTCCATCCCGATATATGACGTAAATTATCTTCATTGTCGGCATAAACTTATCTATATCAATGTATTGTTTGTAGTTAAAATTTGGAATGGTAGTGTGTTAAGAGTACTAAGTGATATAAGTAGAAGTTGAGGACCAGAGTGATATAGATAGAAGTTTATGAACGAAATTGTGTAATTGGTCTTTGGAGCTTATTATACTTTTCCACATTATAGGTGCTTCATGCTTTTAAATATAAAGGTAGTCCATCTCAAATTTTGTTTATATTGTTTCACTTTTGTTTTTCAGAAAAATATATTGCATCCTACTTCCTTCAACTATAATTATTGTGTGCGTAACTGGGTTTATTTCAATGGCATCTCTGTTTGAGAACGTACTTATTAGACAATGGATTGGAATTTTCTCATAGCGTTGTGAGATAAATAATTGTAGACATACCCCCCCCCCCCCNACAATAATAAAAATAATAATATTAATGCATAGATCCCTTCCATACCCTGATTTTGGTTCAAGGTTTAGTATCCTTTATAATGTTTACAGTGTAGGAACTACATGAGATATTTTATATTCCAAGTGATTGGCCTACATGGTTTTGAGCCAAACCATAATCATTATGCCCCCACTGATTGGGTTTAGGTAATTTTTGCTTCAAATTGCATCTTCTTTTCTTTTTGAGTGTTTCTGAAGTGATTTTAATGCAGTATACTCTAAATGATGGATCCCCATGATGAGGCTGGATGCCAAGCTCCTCCAGAAGGTCCTTTCCTGTGCATCAACAATTGTGGCTTCTTCGGCAGCGCAGCCACTAAGAACATGTGCTCCAAGTGTCACAAGGACATGATGCTGAAACAAGATCATGCTAAGCTTGCTGCTTCATCTATTGAAAATCTTGTCAATGGATCATCTAGTAGCAACAAGGAAATGCCTGAAAGTGTTGCCAATGGTGCCATTTCTCTGGAACCAAAGACTAGTCAATCACATGCACTGCCTGCAATGGGATCTGTGGAGGGCGAAGAAGAAAAACCCAAGGAGGGACCAAAACGTTGCAACAGTTGCAAGAAGCGTGTTGGGTTAACAGGCTTCAATTGTCGATGCGGTAATGTATTTTGTGTAGTTCATCGCTACTCTGACAAACATGACTGCCCCTTCGATTACCACATGGCTGCACAAAATGCCATATCCAAAGCCAACCCTGTTGTCAAGGCTCAGAAGCTCGATAAGATCTAGATTTCTTAGGACGAGTTTGTGTCCTAAATTGATGCTATCCAGCTGTGAGGTGGTTTCTGATTTGCTTCAAATCTATGTATCGTCGCTTTATGTTCATATATATGCTGAAGAGATTGCAGTTCCAATATATCTGAATTCTGAAAAATCTATTTGCTTGTGATTCGTTGTTTGTGCTTTTTGCAATGGACATCATCGTTACCGGTCTGGTAACGCTTTCTCTTTGCGTATTGTAGCTGTTCCGCTTGAGTACGAGTACCCTTCCTGTGTACAATTTTTCGATGCCCTTATGTTTGGTCTTCTAAGCTGTTGTTCTGATCTTAATTTGTATCATCTTGTCAAGGAGTTAGCTTGAACAAAATCTTGCAGCCTACTCGAAATTCAGAATGACAGACTTACCAATTGTCTGATGTGAATGACAAGACTCGATGGCCTTTTCAACCTGTATTGCAAATCTACCATGCACTAAATTGGTATAAACTCATCGGTTTCTGATTTAACATTATTCTTATGGGGTTGAAATTATATCCATTTATAAATGCTAGACTGTCTATAATGGGGTTGAAATTATATCCATTTATAAATGCTAGACTATCAATAGACGATATTATTCTTTTAATAGATAAATTTGTTATATTGGCTTTGCTTTCTTTGAAATTTGGACTGTTATGTCATGTCCATTAGCAGGTTCCAGATGGTTGTAAGATTATGGACAAGAAGCATAAAGCTGAGCACTTGATCTCTGTTCAAGTATAGCCTGTTTTAATTTGCATTTAAAATTGAGCTTGATTCTGGGTGTCAGATAATGTTTGGTGAA ATGACCTATACACGGGCAGAGAGAAGAAAACGCTCTCTTTCTCTCTCTTCTCTCTGGCTCTGCTTCTATTTCCTCAGTGATTCTAAAACTGTTCAGAAGCCGGGGTTTAATTTCCATGGGATTCTGAGTTCTTCGATCGAGCATAAAGATTCGTCTATCAGAGATATCTATCGTCAGGCTGGATGCCAAGCTCCTCCAGAAGGTCCTTTCCTGTGCATCAACAATTGTGGCTTCTTCGGCAGCGCAGCCACTAAGAACATGTGCTCCAAGTGTCACAAGGACATGATGCTGAAACAAGATCATGCTAAGCTTGCTGCTTCATCTATTGAAAATCTTGTCAATGGATCATCTAGTAGCAACAAGGAAATGCCTGAAAGTGTTGCCAATGGTGCCATTTCTCTGGAACCAAAGACTAGTCAATCACATGCACTGCCTGCAATGGGATCTGTGGAGGGCGAAGAAGAAAAACCCAAGGAGGGACCAAAACGTTGCAACAGTTGCAAGAAGCGTGTTGGGTTAACAGGCTTCAATTGTCGATGCGGTAATGTATTTTGTGTAGTTCATCGCTACTCTGACAAACATGACTGCCCCTTCGATTACCACATGGCTGCACAAAATGCCATATCCAAAGCCAACCCTGTTCCAGATGGTTGTAAGATTATGGACAAGAAGCATAAAGCTGAGCACTTGATCTCTGTTCAAGTATAGCCTGTTTTAATTTGCATTTAAAATTGAGCTTGATTCTGGGTGTCAGATAATGTTTGGTGAA ATGACCTATACACGGGCAGAGAGAAGAAAACGCTCTCTTTCTCTCTCTTCTCTCTGGCTCTGCTTCTATTTCCTCAGTGATTCTAAAACTGTTCAGAAGCCGGGGTTTAATTTCCATGGGATTCTGAGTTCTTCGATCGAGCATAAAGATTCGTCTATCAGAGATATCTATCGTCAGGCTGGATGCCAAGCTCCTCCAGAAGGTCCTTTCCTGTGCATCAACAATTGTGGCTTCTTCGGCAGCGCAGCCACTAAGAACATGTGCTCCAAGTGTCACAAGGACATGATGCTGAAACAAGATCATGCTAAGCTTGCTGCTTCATCTATTGAAAATCTTGTCAATGGATCATCTAGTAGCAACAAGGAAATGCCTGAAAGTGTTGCCAATGGTGCCATTTCTCTGGAACCAAAGACTAGTCAATCACATGCACTGCCTGCAATGGGATCTGTGGAGGGCGAAGAAGAAAAACCCAAGGAGGGACCAAAACGTTGCAACAGTTGCAAGAAGCGTGTTGGGTTAACAGGCTTCAATTGTCGATGCGGTAATGTATTTTGTGTAGTTCATCGCTACTCTGACAAACATGACTGCCCCTTCGATTACCACATGGCTGCACAAAATGCCATATCCAAAGCCAACCCTGTTCCAGATGGTTGTAAGATTATGGACAAGAAGCATAAAGCTGAGCACTTGATCTCTGTTCAAGTATAG MTYTRAERRKRSLSLSSLWLCFYFLSDSKTVQKPGFNFHGILSSSIEHKDSSIRDIYRQAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGSSSSNKEMPESVANGAISLEPKTSQSHALPAMGSVEGEEEKPKEGPKRCNSCKKRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVPDGCKIMDKKHKAEHLISVQV Homology
BLAST of Cp4.1LG05g05030 vs. ExPASy Swiss-Prot
Match: A2YEZ6 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica OX=39946 GN=SAP8 PE=2 SV=2) HSP 1 Score: 197.2 bits (500), Expect = 2.1e-49 Identity = 96/161 (59.63%), Postives = 121/161 (75.16%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. ExPASy Swiss-Prot
Match: A3BDI8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP8 PE=2 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 2.1e-49 Identity = 96/161 (59.63%), Postives = 121/161 (75.16%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. ExPASy Swiss-Prot
Match: Q6H7P8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP4 PE=2 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 4.3e-47 Identity = 92/163 (56.44%), Postives = 120/163 (73.62%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. ExPASy Swiss-Prot
Match: Q8H0X0 (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=SAP2 PE=2 SV=2) HSP 1 Score: 172.2 bits (435), Expect = 7.1e-42 Identity = 85/164 (51.83%), Postives = 108/164 (65.85%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. ExPASy Swiss-Prot
Match: Q7Y1W9 (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP9 PE=2 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.4e-29 Identity = 66/149 (44.30%), Postives = 85/149 (57.05%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. NCBI nr
Match: XP_022995163.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita maxima] >XP_022995164.1 zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita maxima] >XP_022995165.1 zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita maxima]) HSP 1 Score: 326 bits (836), Expect = 3.45e-111 Identity = 157/166 (94.58%), Postives = 160/166 (96.39%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. NCBI nr
Match: XP_023532615.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita pepo subsp. pepo] >XP_023532617.1 zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita pepo subsp. pepo] >XP_023532618.1 zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 326 bits (835), Expect = 4.90e-111 Identity = 157/166 (94.58%), Postives = 160/166 (96.39%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. NCBI nr
Match: KAG7035847.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 324 bits (831), Expect = 1.93e-110 Identity = 156/166 (93.98%), Postives = 159/166 (95.78%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. NCBI nr
Match: XP_022958270.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita moschata] >XP_022958271.1 zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita moschata] >XP_022958272.1 zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita moschata]) HSP 1 Score: 324 bits (831), Expect = 1.99e-110 Identity = 156/166 (93.98%), Postives = 159/166 (95.78%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. NCBI nr
Match: XP_031739632.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8 isoform X1 [Cucumis sativus]) HSP 1 Score: 310 bits (793), Expect = 1.64e-103 Identity = 165/225 (73.33%), Postives = 178/225 (79.11%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. ExPASy TrEMBL
Match: A0A6J1K3D1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111490785 PE=4 SV=1) HSP 1 Score: 326 bits (836), Expect = 1.67e-111 Identity = 157/166 (94.58%), Postives = 160/166 (96.39%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. ExPASy TrEMBL
Match: A0A6J1H314 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111459547 PE=4 SV=1) HSP 1 Score: 324 bits (831), Expect = 9.65e-111 Identity = 156/166 (93.98%), Postives = 159/166 (95.78%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. ExPASy TrEMBL
Match: A0A6J1D627 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like OS=Momordica charantia OX=3673 GN=LOC111017375 PE=4 SV=1) HSP 1 Score: 296 bits (758), Expect = 1.31e-99 Identity = 143/168 (85.12%), Postives = 153/168 (91.07%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. ExPASy TrEMBL
Match: A0A1S3BMQ6 (zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Cucumis melo OX=3656 GN=LOC103491525 PE=4 SV=1) HSP 1 Score: 291 bits (746), Expect = 7.64e-98 Identity = 140/166 (84.34%), Postives = 149/166 (89.76%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. ExPASy TrEMBL
Match: A0A5A7TJ58 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00450 PE=4 SV=1) HSP 1 Score: 291 bits (746), Expect = 7.64e-98 Identity = 140/166 (84.34%), Postives = 149/166 (89.76%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. TAIR 10
Match: AT1G51200.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 172.2 bits (435), Expect = 5.1e-43 Identity = 85/164 (51.83%), Postives = 108/164 (65.85%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. TAIR 10
Match: AT1G51200.2 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 172.2 bits (435), Expect = 5.1e-43 Identity = 85/164 (51.83%), Postives = 108/164 (65.85%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. TAIR 10
Match: AT1G51200.3 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 172.2 bits (435), Expect = 5.1e-43 Identity = 85/164 (51.83%), Postives = 108/164 (65.85%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. TAIR 10
Match: AT1G51200.4 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 172.2 bits (435), Expect = 5.1e-43 Identity = 85/164 (51.83%), Postives = 108/164 (65.85%), Query Frame = 0
BLAST of Cp4.1LG05g05030 vs. TAIR 10
Match: AT2G36320.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 128.3 bits (321), Expect = 8.4e-30 Identity = 66/155 (42.58%), Postives = 88/155 (56.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|