Cp4.1LG05g04200 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g04200
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ATPase assembly factor ATP
Location	Cp4.1LG05: 2522172 .. 2525475 (+)
RNA-Seq Expression	Cp4.1LG05g04200
Synteny	Cp4.1LG05g04200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACGGTCCGGTTATTGCGTACCAATATCGATCCCACCGGTGGTGACTCAGGAGCAGTCCGTTCCCGCGGTTTGCAGAGATTGACCGTACAGTTTTCCGATTAGGGTTCATCAGAGAATCTACAGAGAGTGTGAAGACGATACCGTGAGAGAAGGCGAATCGATCACAGACATGTTTGGGTTGAAGCGATTAGTTCCTCATGCGTGCTCGATTCGAGCTTCTTTAACAATGCAGCTCTCTGGTTACCAGGAAAAATTCCTTGTTTTTCCTTCGCTGCACTTAGCTCAGCTGACTTCCAATCGCTTCCTCGACATTTATCAGGTACCTTGATTACTTTTCTTAGATTCCATTAGGTTTTGAGAATATGAAACGAAATTTATTTAACAAAAATGGTGGATATTTTGACTTTTTTTCTTTGGTTGCTCTTTCGACGAAGAATTTTACTCTTTTTGTTGTTGAAAGATAATTGTACATGACCGAGAACATCTGACGTGAATTTATAACTGATTGCTTAGTTATGTTTCTTAGAACTGGTTGAAAATACTCGTTCATGCCTGTTATATGTTTTAGATTCTTCTTGATGCAGTTATTCGGATAAGTAAAAGGGTAATATGTGTGTGTCATATTAAGATTTCTTTTTCCTGATGTTTGCAGCTTGGAAACAAAACAGCCATTGAGAAAGAGCGCGCTCGACTGTAAGTTGCATTACAAAGCTGTAGGCAATTGATTAACTGAGACCAAAAATTATCAAGAAGCTTTGTTGATTTAAATTGTGACAGTGCAGATGAAATGAACAGAGGATACTTTGCTGATCTTGCAGAGCTTAAGCAACATGGTGGAAAGGTAATATATTAGTTTTGATGACAAGTCGCGTTAAATTTTAAATGGTAGTGTAAGGTTTTTTTTCTCGAATTTTAATTAATTAAAGCCGAGTTTGAAGATTGCAGCAGCTAACAAGATTCTGATTCCGGCTATGGCTGCTGTAAAATTTCCCGAGTTTGAAGTGAGCTATTCTGATGGTAAATCGTTGAAGCTACCCATTAAATTCGATGCTAATGAGGTTGAAGGCAATAATTCGGCATCGGCCTTGCCTGTGGCCACATTACTGTGTCTTTCTTTCAGAGAAAGCTCCCAGGTACATTTTGGTTTTGTTATCATCCGTTGTGTTGGTTGACATGGATACAACATGTTAAGTTTATAATAATCTTTAATATGATGACAGTATTGTATCATTAATTAGGATTTTGAAGTGTCCTTTGCCATTCCCAATTCTTATTTCTCTCCAAGAAATTTGAATTTTCAGTTATCTGGAAAATGGATAAAATACAATTATATATACACTGTGATCTTTTGTCATGTCCGGAAGGATCCTGAAAACTTTTAAATCAAATGGCATACGTATCTCTGTGATCTTTTGGGATAAGCTATACTTTATTCTGGATTGGTGGCTAACAACATTTGGATCGGTGGCTTTAAAGATATTAGTTTGAATTAAAGCTTTCTTCATTGCGTTGATCAGTGTCAATCCAAGTGGTTGGATGCTACATATTTAAAGAGTTAATGTAAAAAAGCAGAGTTAATTGCCTTCTTTTACTTTATTTTGTTAGGAGAAACGTTGTCTCACTGATAAGAAGTGGTATTGCCCCTTTTTCTTTGTCTAATAGCGTTAGAGTTTCAGAATTTCAAATAAAATGGTTCTGAAATAAACTACTTAAATGCACTAAAATAAGCTAGCAAACTTCATATTCAAATTTTGATGCTGTTTGGGAATGGTATTAAAAAGTTCTCAATTCTTTTAGGACTGGTATCTGTTCTTTATTGTTAACTTATTTAGACAGTCCAAACTTTGAATGTTGTTTTAGCTGAGTTGTGCTCAAACATTCTTTGATTTAAGAAGAGTCTTCAAGTATTCTTTAGAATAATAAATCAAATCAAATAAAATAAAGGCTATGCAGCACAATACTCTTTTAAACAATGAAGTATTCTCTTTTAGCCCATTATAAATCTGTTTAAAAGAACTTTTCCCTTGGAAGTACGTCCAAACAATACCTTGCTTTCCATTCACTTCCTTTGAAGGAGCAATTGAGTTAGACAGGCATGCTTGCAAATCATTAAATTGATCAAGAAAAGAGGTATGTTGGTATCATCATCATATCTTCCTTTTACCTTTGCAGGCCATGATTAATTCTTGGAGTGCCCCTTTTCTTGATGCCTTTTCGAGTTCAAAGAATGTCCAGTTATACGAGGTAACGTAATTCCATAACTAACTATATTTGGTCCAGCCATACGTAATGACCATTTTCTGTTGCAATTTAAAAATTTAGAAACTTCGGCATTCTAATCAGAATGCAGATGCTGTTCTATGTGTGTAGAAACTGAATTTGTAATGTTATGGTTCTGTTAACAGCATTTAGAATTTTCACTTGCAAGGTTTCATTTATAGACTCGTGGTTGTTATGTCGGAATCCAATTAAGAAATTGCTTCTTCGGCTGATGAGGAAATCCAGTGACAATGCACTGAATGATTCACTTCAAAGGAAGATTGTATACTCGTTTGGCGACCATTATTACTTCAGAAAGGAGCTCAAAATAATAAATCTTCTCTCTGGGTATGAGTTTTTTCATTTCCCTGCCTTCCTTTCCGTTTTCCTCAGATAAATCAATAAAGTAAAGTGATACAAATATTCTTCGTGAACTTTTTTTTTTCTTCTTTTTGCTTCTTAGGTATATATTTCTGCTTGACAAATTTGGTAGAATAAGATGGCAAGGATTTGGATTGGCAACTCAAGAGGAGGTGTCATCTCTTCTTTCATGCGCGTCACTTCTTTTGGAAGAGAAATAAGTGAGTGATCTAAAATTAACTTGATCTAAAAAAGTCACTTCTTTTGGAAAGTTTTTTTCTTCTCAATTTCTCATTGTTTATATTTACTTTAAATAAAAAAAATTAACTTGATCTATTCAATGTTCTTCAGAACTTATCCTCCATAAAATGATTTGGGGTCGGAAGTCTATTTTCTGACGATGCAGCAAGAAAAATTAGCAGATGATTACTGGAATGGGTATTTATCAATAAGGATGATCTGATTTTCAAATGGTGTGAATTAACGCCAAGGAAAGATTTTGTGAGTTAATTTCTAGAAAGCAACTATTATATATATTAAAGTCAAGTTGTCAAATGTAAGATGACGACTCTTTTTGTTATATAATGTATACTCATTTTATTTCCAAGGTTTTGTTTGTAATTTCACGTGTTGGTTTATTTTCGTGAACACCTAGGTTAATGCTATAGAAAATAAATTATTAG

mRNA sequence

TAACGGTCCGGTTATTGCGTACCAATATCGATCCCACCGGTGGTGACTCAGGAGCAGTCCGTTCCCGCGGTTTGCAGAGATTGACCGTACAGTTTTCCGATTAGGGTTCATCAGAGAATCTACAGAGAGTGTGAAGACGATACCGTGAGAGAAGGCGAATCGATCACAGACATGTTTGGGTTGAAGCGATTAGTTCCTCATGCGTGCTCGATTCGAGCTTCTTTAACAATGCAGCTCTCTGGTTACCAGGAAAAATTCCTTGTTTTTCCTTCGCTGCACTTAGCTCAGCTGACTTCCAATCGCTTCCTCGACATTTATCAGCTTGGAAACAAAACAGCCATTGAGAAAGAGCGCGCTCGACTTGCAGATGAAATGAACAGAGGATACTTTGCTGATCTTGCAGAGCTTAAGCAACATGGTGGAAAGCCGAGTTTGAAGATTGCAGCAGCTAACAAGATTCTGATTCCGGCTATGGCTGCTGTAAAATTTCCCGAGTTTGAAGTGAGCTATTCTGATGGTAAATCGTTGAAGCTACCCATTAAATTCGATGCTAATGAGGTTGAAGGCAATAATTCGGCATCGGCCTTGCCTGTGGCCACATTACTGTGTCTTTCTTTCAGAGAAAGCTCCCAGGCCATGATTAATTCTTGGAGTGCCCCTTTTCTTGATGCCTTTTCGAGTTCAAAGAATGTCCAGTTATACGAGGTTTCATTTATAGACTCGTGGTTGTTATGTCGGAATCCAATTAAGAAATTGCTTCTTCGGCTGATGAGGAAATCCAGTGACAATGCACTGAATGATTCACTTCAAAGGAAGATTGTATACTCGTTTGGCGACCATTATTACTTCAGAAAGGAGCTCAAAATAATAAATCTTCTCTCTGGGTATATATTTCTGCTTGACAAATTTGGTAGAATAAGATGGCAAGGATTTGGATTGGCAACTCAAGAGGAGGTGTCATCTCTTCTTTCATGCGCGTCACTTCTTTTGGAAGAGAAATAAAACTTATCCTCCATAAAATGATTTGGGGTCGGAAGTCTATTTTCTGACGATGCAGCAAGAAAAATTAGCAGATGATTACTGGAATGGGTATTTATCAATAAGGATGATCTGATTTTCAAATGGTGTGAATTAACGCCAAGGAAAGATTTTGTGAGTTAATTTCTAGAAAGCAACTATTATATATATTAAAGTCAAGTTGTCAAATGTAAGATGACGACTCTTTTTGTTATATAATGTATACTCATTTTATTTCCAAGGTTTTGTTTGTAATTTCACGTGTTGGTTTATTTTCGTGAACACCTAGGTTAATGCTATAGAAAATAAATTATTAG

Coding sequence (CDS)

ATGTTTGGGTTGAAGCGATTAGTTCCTCATGCGTGCTCGATTCGAGCTTCTTTAACAATGCAGCTCTCTGGTTACCAGGAAAAATTCCTTGTTTTTCCTTCGCTGCACTTAGCTCAGCTGACTTCCAATCGCTTCCTCGACATTTATCAGCTTGGAAACAAAACAGCCATTGAGAAAGAGCGCGCTCGACTTGCAGATGAAATGAACAGAGGATACTTTGCTGATCTTGCAGAGCTTAAGCAACATGGTGGAAAGCCGAGTTTGAAGATTGCAGCAGCTAACAAGATTCTGATTCCGGCTATGGCTGCTGTAAAATTTCCCGAGTTTGAAGTGAGCTATTCTGATGGTAAATCGTTGAAGCTACCCATTAAATTCGATGCTAATGAGGTTGAAGGCAATAATTCGGCATCGGCCTTGCCTGTGGCCACATTACTGTGTCTTTCTTTCAGAGAAAGCTCCCAGGCCATGATTAATTCTTGGAGTGCCCCTTTTCTTGATGCCTTTTCGAGTTCAAAGAATGTCCAGTTATACGAGGTTTCATTTATAGACTCGTGGTTGTTATGTCGGAATCCAATTAAGAAATTGCTTCTTCGGCTGATGAGGAAATCCAGTGACAATGCACTGAATGATTCACTTCAAAGGAAGATTGTATACTCGTTTGGCGACCATTATTACTTCAGAAAGGAGCTCAAAATAATAAATCTTCTCTCTGGGTATATATTTCTGCTTGACAAATTTGGTAGAATAAGATGGCAAGGATTTGGATTGGCAACTCAAGAGGAGGTGTCATCTCTTCTTTCATGCGCGTCACTTCTTTTGGAAGAGAAATAA

Protein sequence

MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKERARLADEMNRGYFADLAELKQHGGKPSLKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYIFLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK

Homology

[Close]

BLAST of Cp4.1LG05g04200 vs. NCBI nr
Match: XP_023532866.1 (uncharacterized protein LOC111794906 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527 bits (1358), Expect = 1.89e-188
Identity = 272/276 (98.55%), Postives = 272/276 (98.55%), Query Frame = 0


Query: 1   MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEMNRGYFADLAELKQHGGKPSLKIAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120
           RARLADEMNRGYFADLAELKQHGGK    IAAANKILIPAMAAVKFPEFEVSYSDGKSLK
Sbjct: 61  RARLADEMNRGYFADLAELKQHGGK----IAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120

Query: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVS 180
           LPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVS
Sbjct: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVS 180

Query: 181 FIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYI 240
           FIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYI
Sbjct: 181 FIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYI 240

Query: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 276
           FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK
Sbjct: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 272

[Close]

BLAST of Cp4.1LG05g04200 vs. NCBI nr
Match: XP_022995314.1 (uncharacterized protein LOC111490897 [Cucurbita maxima])

HSP 1 Score: 506 bits (1304), Expect = 3.21e-180
Identity = 260/276 (94.20%), Postives = 266/276 (96.38%), Query Frame = 0


Query: 1   MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPHACSIRASL MQLSGYQEKFLVFPS HLAQLTSNRFL+IYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHACSIRASLRMQLSGYQEKFLVFPSQHLAQLTSNRFLNIYQLGNKTAIEKE 60

Query: 61  RARLADEMNRGYFADLAELKQHGGKPSLKIAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120
           RARLADE+NRGYFAD+AELKQHGGK    IAAANKILIPAMAAVKFPEFEVSYSDGKSLK
Sbjct: 61  RARLADEINRGYFADIAELKQHGGK----IAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120

Query: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVS 180
           LPIKFDANEVEGNNSASALPVATLLCLSFR SSQAMINSWS PFLDAFSSSKN+QLYEVS
Sbjct: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRASSQAMINSWSTPFLDAFSSSKNIQLYEVS 180

Query: 181 FIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYI 240
           FIDSWLLCRNPIKK+LLRLMRKSSDNA  DSLQRKIVYSFGDHYYFRKELKI+NLLSGYI
Sbjct: 181 FIDSWLLCRNPIKKVLLRLMRKSSDNAQIDSLQRKIVYSFGDHYYFRKELKILNLLSGYI 240

Query: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 276
           FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK
Sbjct: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 272

[Close]

BLAST of Cp4.1LG05g04200 vs. NCBI nr
Match: XP_022958438.1 (uncharacterized protein LOC111459659 [Cucurbita moschata])

HSP 1 Score: 505 bits (1301), Expect = 9.21e-180
Identity = 259/276 (93.84%), Postives = 265/276 (96.01%), Query Frame = 0


Query: 1   MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPH CSIR SLTMQLSGYQEK LVFPS HLAQLTSNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHTCSIRTSLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEMNRGYFADLAELKQHGGKPSLKIAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120
           RARLADE+NRGYFAD+AELKQHGGK    IAAANKILIPAMAAVKFPEFEVSYSDGKSLK
Sbjct: 61  RARLADEINRGYFADIAELKQHGGK----IAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120

Query: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVS 180
           LPIKFDANEVEGN+ ASALP+ATLLCLSFR SSQAMINSWSAPFLDAFSSSKNVQLYEVS
Sbjct: 121 LPIKFDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVS 180

Query: 181 FIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYI 240
           FIDSWLLCRNPIKK+LLRLMRKSSDNA NDSLQRKIVYSFGDHYYFRKELKI+NLLSGYI
Sbjct: 181 FIDSWLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYI 240

Query: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 276
           FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK
Sbjct: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 272

[Close]

BLAST of Cp4.1LG05g04200 vs. NCBI nr
Match: XP_022140745.1 (uncharacterized protein LOC111011334 isoform X1 [Momordica charantia])

HSP 1 Score: 476 bits (1225), Expect = 3.27e-168
Identity = 241/276 (87.32%), Postives = 259/276 (93.84%), Query Frame = 0


Query: 1   MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRL+PHACSIRASLTMQLSGYQEKFLVFPS HL+ L SNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLIPHACSIRASLTMQLSGYQEKFLVFPSQHLSHLISNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEMNRGYFADLAELKQHGGKPSLKIAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120
           RARLADEMNRGYFAD++ELKQHGGK    IAAANKILIPA+AAVKFP+FEVSYSD K+LK
Sbjct: 61  RARLADEMNRGYFADISELKQHGGK----IAAANKILIPAVAAVKFPDFEVSYSDAKTLK 120

Query: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVS 180
           LP+KFDAN VE N+SA  LPVATLLCLSFR SSQ MI+SWSAPFLDAFSSSKNVQLYEVS
Sbjct: 121 LPVKFDANVVEANSSA--LPVATLLCLSFRASSQPMIDSWSAPFLDAFSSSKNVQLYEVS 180

Query: 181 FIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYI 240
           FIDSW LCRNPIK++LLRLMRKSSDNA NDSLQR++VYSFGDHYYFRKELKI+NLL+GYI
Sbjct: 181 FIDSWFLCRNPIKRVLLRLMRKSSDNAQNDSLQRQVVYSFGDHYYFRKELKILNLLTGYI 240

Query: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 276
           FLLDKFGRIRWQGFGLATQEE+SSLLSC SL+LEEK
Sbjct: 241 FLLDKFGRIRWQGFGLATQEELSSLLSCTSLILEEK 270

[Close]

BLAST of Cp4.1LG05g04200 vs. NCBI nr
Match: XP_004145771.1 (uncharacterized protein LOC101222490 isoform X2 [Cucumis sativus])

HSP 1 Score: 474 bits (1220), Expect = 2.03e-167
Identity = 241/276 (87.32%), Postives = 258/276 (93.48%), Query Frame = 0


Query: 1   MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPHACSIRASLTMQLS Y++KFLVFPS HLAQLTSNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHACSIRASLTMQLSVYEDKFLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEMNRGYFADLAELKQHGGKPSLKIAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120
           RARLADE+NRGYFAD++ELKQHGGK    IAAANKILIPAMAAVKFPEFEVSYSDGK+LK
Sbjct: 61  RARLADEINRGYFADMSELKQHGGK----IAAANKILIPAMAAVKFPEFEVSYSDGKTLK 120

Query: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVS 180
           LPIK D N +EGN+S S LP+ATLLCLSFR +SQAMI+SWSA FL+AFSSS NVQLYEVS
Sbjct: 121 LPIKSDVNVIEGNSSPSGLPMATLLCLSFRANSQAMIDSWSASFLNAFSSSNNVQLYEVS 180

Query: 181 FIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYI 240
           FIDSW LCRNPIKKLLLRLMRKSS NA NDSLQR+IVYSFGDHYYFRKELKI+NLL+GY+
Sbjct: 181 FIDSWFLCRNPIKKLLLRLMRKSSGNAQNDSLQRQIVYSFGDHYYFRKELKILNLLTGYV 240

Query: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 276
           FL+DK GRIRWQGFGLATQEEVSSLLSCASLLLEEK
Sbjct: 241 FLVDKLGRIRWQGFGLATQEEVSSLLSCASLLLEEK 272

[Close]

BLAST of Cp4.1LG05g04200 vs. ExPASy TrEMBL
Match: A0A6J1K5D3 (uncharacterized protein LOC111490897 OS=Cucurbita maxima OX=3661 GN=LOC111490897 PE=4 SV=1)

HSP 1 Score: 506 bits (1304), Expect = 1.56e-180
Identity = 260/276 (94.20%), Postives = 266/276 (96.38%), Query Frame = 0


Query: 1   MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPHACSIRASL MQLSGYQEKFLVFPS HLAQLTSNRFL+IYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHACSIRASLRMQLSGYQEKFLVFPSQHLAQLTSNRFLNIYQLGNKTAIEKE 60

Query: 61  RARLADEMNRGYFADLAELKQHGGKPSLKIAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120
           RARLADE+NRGYFAD+AELKQHGGK    IAAANKILIPAMAAVKFPEFEVSYSDGKSLK
Sbjct: 61  RARLADEINRGYFADIAELKQHGGK----IAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120

Query: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVS 180
           LPIKFDANEVEGNNSASALPVATLLCLSFR SSQAMINSWS PFLDAFSSSKN+QLYEVS
Sbjct: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRASSQAMINSWSTPFLDAFSSSKNIQLYEVS 180

Query: 181 FIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYI 240
           FIDSWLLCRNPIKK+LLRLMRKSSDNA  DSLQRKIVYSFGDHYYFRKELKI+NLLSGYI
Sbjct: 181 FIDSWLLCRNPIKKVLLRLMRKSSDNAQIDSLQRKIVYSFGDHYYFRKELKILNLLSGYI 240

Query: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 276
           FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK
Sbjct: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 272

[Close]

BLAST of Cp4.1LG05g04200 vs. ExPASy TrEMBL
Match: A0A6J1H332 (uncharacterized protein LOC111459659 OS=Cucurbita moschata OX=3662 GN=LOC111459659 PE=4 SV=1)

HSP 1 Score: 505 bits (1301), Expect = 4.46e-180
Identity = 259/276 (93.84%), Postives = 265/276 (96.01%), Query Frame = 0


Query: 1   MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPH CSIR SLTMQLSGYQEK LVFPS HLAQLTSNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHTCSIRTSLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEMNRGYFADLAELKQHGGKPSLKIAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120
           RARLADE+NRGYFAD+AELKQHGGK    IAAANKILIPAMAAVKFPEFEVSYSDGKSLK
Sbjct: 61  RARLADEINRGYFADIAELKQHGGK----IAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120

Query: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVS 180
           LPIKFDANEVEGN+ ASALP+ATLLCLSFR SSQAMINSWSAPFLDAFSSSKNVQLYEVS
Sbjct: 121 LPIKFDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVS 180

Query: 181 FIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYI 240
           FIDSWLLCRNPIKK+LLRLMRKSSDNA NDSLQRKIVYSFGDHYYFRKELKI+NLLSGYI
Sbjct: 181 FIDSWLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYI 240

Query: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 276
           FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK
Sbjct: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 272

[Close]

BLAST of Cp4.1LG05g04200 vs. ExPASy TrEMBL
Match: A0A6J1CG05 (uncharacterized protein LOC111011334 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011334 PE=4 SV=1)

HSP 1 Score: 476 bits (1225), Expect = 1.58e-168
Identity = 241/276 (87.32%), Postives = 259/276 (93.84%), Query Frame = 0


Query: 1   MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRL+PHACSIRASLTMQLSGYQEKFLVFPS HL+ L SNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLIPHACSIRASLTMQLSGYQEKFLVFPSQHLSHLISNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEMNRGYFADLAELKQHGGKPSLKIAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120
           RARLADEMNRGYFAD++ELKQHGGK    IAAANKILIPA+AAVKFP+FEVSYSD K+LK
Sbjct: 61  RARLADEMNRGYFADISELKQHGGK----IAAANKILIPAVAAVKFPDFEVSYSDAKTLK 120

Query: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVS 180
           LP+KFDAN VE N+SA  LPVATLLCLSFR SSQ MI+SWSAPFLDAFSSSKNVQLYEVS
Sbjct: 121 LPVKFDANVVEANSSA--LPVATLLCLSFRASSQPMIDSWSAPFLDAFSSSKNVQLYEVS 180

Query: 181 FIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYI 240
           FIDSW LCRNPIK++LLRLMRKSSDNA NDSLQR++VYSFGDHYYFRKELKI+NLL+GYI
Sbjct: 181 FIDSWFLCRNPIKRVLLRLMRKSSDNAQNDSLQRQVVYSFGDHYYFRKELKILNLLTGYI 240

Query: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 276
           FLLDKFGRIRWQGFGLATQEE+SSLLSC SL+LEEK
Sbjct: 241 FLLDKFGRIRWQGFGLATQEELSSLLSCTSLILEEK 270

[Close]

BLAST of Cp4.1LG05g04200 vs. ExPASy TrEMBL
Match: A0A0A0KGL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149420 PE=4 SV=1)

HSP 1 Score: 474 bits (1220), Expect = 9.83e-168
Identity = 241/276 (87.32%), Postives = 258/276 (93.48%), Query Frame = 0


Query: 1   MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPHACSIRASLTMQLS Y++KFLVFPS HLAQLTSNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHACSIRASLTMQLSVYEDKFLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEMNRGYFADLAELKQHGGKPSLKIAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120
           RARLADE+NRGYFAD++ELKQHGGK    IAAANKILIPAMAAVKFPEFEVSYSDGK+LK
Sbjct: 61  RARLADEINRGYFADMSELKQHGGK----IAAANKILIPAMAAVKFPEFEVSYSDGKTLK 120

Query: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVS 180
           LPIK D N +EGN+S S LP+ATLLCLSFR +SQAMI+SWSA FL+AFSSS NVQLYEVS
Sbjct: 121 LPIKSDVNVIEGNSSPSGLPMATLLCLSFRANSQAMIDSWSASFLNAFSSSNNVQLYEVS 180

Query: 181 FIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYI 240
           FIDSW LCRNPIKKLLLRLMRKSS NA NDSLQR+IVYSFGDHYYFRKELKI+NLL+GY+
Sbjct: 181 FIDSWFLCRNPIKKLLLRLMRKSSGNAQNDSLQRQIVYSFGDHYYFRKELKILNLLTGYV 240

Query: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 276
           FL+DK GRIRWQGFGLATQEEVSSLLSCASLLLEEK
Sbjct: 241 FLVDKLGRIRWQGFGLATQEEVSSLLSCASLLLEEK 272

[Close]

BLAST of Cp4.1LG05g04200 vs. ExPASy TrEMBL
Match: A0A1S3C8Y6 (uncharacterized protein LOC103497992 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497992 PE=4 SV=1)

HSP 1 Score: 469 bits (1207), Expect = 9.40e-166
Identity = 240/276 (86.96%), Postives = 257/276 (93.12%), Query Frame = 0


Query: 1   MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPHACSIRASLTMQLS Y+EKFLVFPS HLAQLTSNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHACSIRASLTMQLSVYEEKFLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEMNRGYFADLAELKQHGGKPSLKIAAANKILIPAMAAVKFPEFEVSYSDGKSLK 120
           RARLADE+NRGYFAD++ELK+HGGK    IAAANKILIPAMAAVKFPEFEVSYSDGK+LK
Sbjct: 61  RARLADEINRGYFADMSELKKHGGK----IAAANKILIPAMAAVKFPEFEVSYSDGKTLK 120

Query: 121 LPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVS 180
           LPIK D N VEGN+S S LP+ATLLCLSFR +SQAMI+SWSA FL+AFSSS NVQLYEVS
Sbjct: 121 LPIKSDVNVVEGNSSPSGLPIATLLCLSFRANSQAMIDSWSASFLNAFSSSNNVQLYEVS 180

Query: 181 FIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYI 240
           FIDSW LCR+PIKKLLLRLMRKSS NA NDSLQR+IVYSFGDHYYFRKELKI+NLL+GYI
Sbjct: 181 FIDSWFLCRSPIKKLLLRLMRKSSGNAQNDSLQRQIVYSFGDHYYFRKELKILNLLTGYI 240

Query: 241 FLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 276
           FL+DK GRIRWQG GLAT+EEVSSLLSCASLLLEEK
Sbjct: 241 FLVDKLGRIRWQGSGLATEEEVSSLLSCASLLLEEK 272

[Close]

BLAST of Cp4.1LG05g04200 vs. TAIR 10
Match: AT1G08220.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 168 Blast hits to 168 proteins in 86 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). )

HSP 1 Score: 291.6 bits (745), Expect = 6.7e-79
Identity = 148/236 (62.71%), Postives = 187/236 (79.24%), Query Frame = 0


Query: 41  TSNRFLDIYQLGNKTAIEKERARLADEMNRGYFADLAELKQHGGKPSLKIAAANKILIPA 100
           T+  FLD Y+ GNK AIE ERARL DEMNRGYFAD+ E K+HGG    KIAAANK +IPA
Sbjct: 46  TTRSFLDFYKFGNKKAIEDERARLNDEMNRGYFADMKEFKEHGG----KIAAANKTIIPA 105

Query: 101 MAAVKFPEFEVSYSDGKSLKLPIKFDANEVEGNNSASALPVATLLCLSFRESSQAMINSW 160
            +A+KFP   V++S+GKSLKLPI  ++NEV+    +  +P  +L+CLSFR SSQ MI+SW
Sbjct: 106 ASAIKFPVLAVTFSNGKSLKLPIAPNSNEVD--TESLVVPKVSLVCLSFRASSQEMISSW 165

Query: 161 SAPFLDAFSSSKNVQLYEVSFIDSWLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSF 220
           S PFL++F + K++QL+EVSFID WLL   PI+KLLLR+++K ++N  N  LQR++ Y+F
Sbjct: 166 SKPFLESFGNRKDLQLFEVSFIDKWLLGLAPIRKLLLRVLQKPNNNE-NSVLQRQVGYAF 225

Query: 221 GDHYYFRKELKIINLLSGYIFLLDKFGRIRWQGFGLATQEEVSSLLSCASLLLEEK 277
           GDHYYFRKE+K++NLL+GYI LLDK GRIRWQGFG AT EEVS LLSC SLLLE++
Sbjct: 226 GDHYYFRKEIKVLNLLTGYILLLDKSGRIRWQGFGTATPEEVSQLLSCTSLLLEDQ 274

[Close]

BLAST of Cp4.1LG05g04200 vs. TAIR 10
Match: AT1G08220.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 152 Blast hits to 152 proteins in 76 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 92; Plants - 30; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). )

HSP 1 Score: 257.3 bits (656), Expect = 1.4e-68
Identity = 130/209 (62.20%), Postives = 167/209 (79.90%), Query Frame = 0


Query: 68  MNRGYFADLAELKQHGGKPSLKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIKFDA 127
           MNRGYFAD+ E K+HGG    KIAAANK +IPA +A+KFP   V++S+GKSLKLPI  ++
Sbjct: 1   MNRGYFADMKEFKEHGG----KIAAANKTIIPAASAIKFPVLAVTFSNGKSLKLPIAPNS 60

Query: 128 NEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDSWLL 187
           NEV+    +  +P  +L+CLSFR SSQ MI+SWS PFL++F + K++QL+EVSFID WLL
Sbjct: 61  NEVD--TESLVVPKVSLVCLSFRASSQEMISSWSKPFLESFGNRKDLQLFEVSFIDKWLL 120

Query: 188 CRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYIFLLDKFG 247
              PI+KLLLR+++K ++N  N  LQR++ Y+FGDHYYFRKE+K++NLL+GYI LLDK G
Sbjct: 121 GLAPIRKLLLRVLQKPNNNE-NSVLQRQVGYAFGDHYYFRKEIKVLNLLTGYILLLDKSG 180

Query: 248 RIRWQGFGLATQEEVSSLLSCASLLLEEK 277
           RIRWQGFG AT EEVS LLSC SLLLE++
Sbjct: 181 RIRWQGFGTATPEEVSQLLSCTSLLLEDQ 202

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g04200 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG05g04200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532866.1	1.89e-188	98.55	uncharacterized protein LOC111794906 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022995314.1	3.21e-180	94.20	uncharacterized protein LOC111490897 [Cucurbita maxima]	[more]
XP_022958438.1	9.21e-180	93.84	uncharacterized protein LOC111459659 [Cucurbita moschata]	[more]
XP_022140745.1	3.27e-168	87.32	uncharacterized protein LOC111011334 isoform X1 [Momordica charantia]	[more]
XP_004145771.1	2.03e-167	87.32	uncharacterized protein LOC101222490 isoform X2 [Cucumis sativus]	[more]

BLAST of Cp4.1LG05g04200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K5D3	1.56e-180	94.20	uncharacterized protein LOC111490897 OS=Cucurbita maxima OX=3661 GN=LOC111490897...	[more]
A0A6J1H332	4.46e-180	93.84	uncharacterized protein LOC111459659 OS=Cucurbita moschata OX=3662 GN=LOC1114596...	[more]
A0A6J1CG05	1.58e-168	87.32	uncharacterized protein LOC111011334 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0KGL5	9.83e-168	87.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149420 PE=4 SV=1	[more]
A0A1S3C8Y6	9.40e-166	86.96	uncharacterized protein LOC103497992 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Cp4.1LG05g04200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08220.1	6.7e-79	62.71	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-tran...	[more]
AT1G08220.2	1.4e-68	62.20	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-tran...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007849	ATPase assembly factor ATP10	PFAM	PF05176	ATP-synt_10	coord: 41..271 e-value: 3.4E-33 score: 115.0
IPR007849	ATPase assembly factor ATP10	PANTHER	PTHR28106	MITOCHONDRIAL ATPASE COMPLEX SUBUNIT ATP10	coord: 34..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g04200.1	Cp4.1LG05g04200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly
cellular_component	GO:0032592	integral component of mitochondrial membrane
cellular_component	GO:0005743	mitochondrial inner membrane