Cp4.1LG05g04150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAAGAGACCGAGAAGTAGCGAGATCGAGGTCGCCTTGAGAGTGGACATGAACCGCTCGCCAACGACCTCGTCGATGAGCATGTTTGGAGGATCAGAGTCGGGATCGGGATCGGATGTGTCGGTGGAGAGTTCTTGCTTGTCGTTGTGGGATGGGGAAGTGGAGGAGGACGAGATGATAGTAACGAGATCGATGANCCTCGTCGATGAGCATGTTTGGAGGATCAGAGTCGGGATCGGGATCGGATGTGTCGGTGGAGAGTTCTTGCTTGTCGTTGTGGGATGGGGAAGTGGAGGAGGACGAGATGATAGTAACGAGATCGATGATGCTTGTCGGGTGTCCGGGGTGCTTCATGTACGTGATGCTGACCGACAAGAGCTCCCAATGTCCCAAATGCAAGAACAATGTGTTTCTTGA ATGAGCAAGAGACCGAGAAGTAGCGAGATCGAGGTCGCCTTGAGAGTGGACATGAACCGCTCGCCAACGACCTCGTCGATGAGCATGTTTGGAGGATCAGAGTCGGGATCGGGATCGGATGTGTCGGTGGAGAGTTCTTGCTTGTCGTTGTGGGATGGGGAAGTGGAGGAGGACGAGATGATAGTAACGAGATCGATGANCCTCGTCGATGAGCATGTTTGGAGGATCAGAGTCGGGATCGGGATCGGATGTGTCGGTGGAGAGTTCTTGCTTGTCGTTGTGGGATGGGGAAGTGGAGGAGGACGAGATGATAGTAACGAGATCGATGATGCTTGTCGGGTGTCCGGGGTGCTTCATGTACGTGATGCTGACCGACAAGAGCTCCCAATGTCCCAAATGCAAGAACAATGTGTTTCTTGA ATGAGCAAGAGACCGAGAAGTAGCGAGATCGAGGTCGCCTTGAGAGTGGACATGAACCGCTCGCCAACGACCTCGTCGATGAGCATGTTTGGAGGATCAGAGTCGGGATCGGGATCGGATGTGTCGGTGGAGAGTTCTTGCTTGTCGTTGTGGGATGGGGAAGTGGAGGAGGACGAGATGATAGTAACGAGATCGATGANCCTCGTCGATGAGCATGTTTGGAGGATCAGAGTCGGGATCGGGATCGGATGTGTCGGTGGAGAGTTCTTGCTTGTCGTTGTGGGATGGGGAAGTGGAGGAGGACGAGATGATAGTAACGAGATCGATGATGCTTGTCGGGTGTCCGGGGTGCTTCATGTACGTGATGCTGACCGACAAGAGCTCCCAATGTCCCAAATGCAAGAACAATGTGTTTCTTGA MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSVESSCLSLWDGEVEEDEMIVTRSMXLVDEHVWRIRVGIGIGCVGGEFLLVVVGWGSGGGRDDSNEIDDACRVSGVLHVRDADRQELPMSQMQEQCVS Homology
BLAST of Cp4.1LG05g04150 vs. NCBI nr
Match: KAG7035922.1 (hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 121 bits (304), Expect = 2.26e-32 Identity = 66/69 (95.65%), Postives = 66/69 (95.65%), Query Frame = 0
BLAST of Cp4.1LG05g04150 vs. NCBI nr
Match: KAG6605971.1 (hypothetical protein SDJN03_03288, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 121 bits (304), Expect = 1.11e-31 Identity = 66/69 (95.65%), Postives = 66/69 (95.65%), Query Frame = 0
BLAST of Cp4.1LG05g04150 vs. NCBI nr
Match: KAG7010337.1 (hypothetical protein SDJN02_27130, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 61.2 bits (147), Expect = 4.66e-09 Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of Cp4.1LG05g04150 vs. NCBI nr
Match: KAG6570472.1 (NAC domain-containing protein 40, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 61.2 bits (147), Expect = 9.45e-08 Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of Cp4.1LG05g04150 vs. NCBI nr
Match: KGN48041.1 (hypothetical protein Csa_002820 [Cucumis sativus]) HSP 1 Score: 57.0 bits (136), Expect = 2.19e-07 Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 0
BLAST of Cp4.1LG05g04150 vs. ExPASy TrEMBL
Match: A0A0A0KJX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425780 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.06e-07 Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 0
BLAST of Cp4.1LG05g04150 vs. ExPASy TrEMBL
Match: A0A5D3BBS4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00200 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 3.88e-07 Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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