Cp4.1LG05g03760 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g03760
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	dehydration-responsive element-binding protein 1C-like
Location	Cp4.1LG05: 1712001 .. 1712690 (-)
RNA-Seq Expression	Cp4.1LG05g03760
Synteny	Cp4.1LG05g03760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCTTCACCCAATTTTCTGATCCAATTCCTTATTATGGTAATTATAATTGCAAGTCGGAATCTTCGTCCACTCTGTCGGACGCCGGAACGCCGCCCCACGTGGTCGCTAACTCCGACGAGGAAGTGATACTGGCGTCGAACCGGCCAAAGCGGCGGGCTGGTCGGCGGGTTTTTAAGGAGACGAGGCATCCAGTGTACAGAGGAGTGCGGCGAAGGAATAAAGGCAAATGGGTGTGTGAGCTAAGGGAGCCGAATAAAAAGACGAGGATTTGGCTCGGGACTTACCCAACTGCTGAGATGGCGGCACGTGCACACGACGTTGCGGCACTCGCGTTGAGAGGAAAATCGGCTTGTCTCAATTTTGCTGACTCAGCTTGGCGGTTTCCGATTCCATCGAGTAATGATCCGTCGGTGATCAGAGAAGCGGCGGCGAAGGCGGCGAAAGAATGTGAGTATGAAGAGTGCAATGTGAGTCGGGAAGAGGACGACGTGATTTTGAGTCAGCCAAAGGCGGAGCCTGATCAACGGGATGACGTCGACGATGAGGCTTTGTCGAATATGCCCATGTTGCTTGCCAGCATGGCGGAAGGACCTCTGCTTTCTCCTCCTCGTTTTTGCGTACGCGATGACGTGGGGTGGGACAACGTGGATACAAATGATGATGTGTCATTGTGGAGCTTTTAG

mRNA sequence

ATGGATTTCTTCACCCAATTTTCTGATCCAATTCCTTATTATGGTAATTATAATTGCAAGTCGGAATCTTCGTCCACTCTGTCGGACGCCGGAACGCCGCCCCACGTGGTCGCTAACTCCGACGAGGAAGTGATACTGGCGTCGAACCGGCCAAAGCGGCGGGCTGGTCGGCGGGTTTTTAAGGAGACGAGGCATCCAGTGTACAGAGGAGTGCGGCGAAGGAATAAAGGCAAATGGGTGTGTGAGCTAAGGGAGCCGAATAAAAAGACGAGGATTTGGCTCGGGACTTACCCAACTGCTGAGATGGCGGCACGTGCACACGACGTTGCGGCACTCGCGTTGAGAGGAAAATCGGCTTGTCTCAATTTTGCTGACTCAGCTTGGCGGTTTCCGATTCCATCGAGTAATGATCCGTCGGTGATCAGAGAAGCGGCGGCGAAGGCGGCGAAAGAATGTGAGTATGAAGAGTGCAATGTGAGTCGGGAAGAGGACGACGTGATTTTGAGTCAGCCAAAGGCGGAGCCTGATCAACGGGATGACGTCGACGATGAGGCTTTGTCGAATATGCCCATGTTGCTTGCCAGCATGGCGGAAGGACCTCTGCTTTCTCCTCCTCGTTTTTGCGTACGCGATGACGTGGGGTGGGACAACGTGGATACAAATGATGATGTGTCATTGTGGAGCTTTTAG

Coding sequence (CDS)

ATGGATTTCTTCACCCAATTTTCTGATCCAATTCCTTATTATGGTAATTATAATTGCAAGTCGGAATCTTCGTCCACTCTGTCGGACGCCGGAACGCCGCCCCACGTGGTCGCTAACTCCGACGAGGAAGTGATACTGGCGTCGAACCGGCCAAAGCGGCGGGCTGGTCGGCGGGTTTTTAAGGAGACGAGGCATCCAGTGTACAGAGGAGTGCGGCGAAGGAATAAAGGCAAATGGGTGTGTGAGCTAAGGGAGCCGAATAAAAAGACGAGGATTTGGCTCGGGACTTACCCAACTGCTGAGATGGCGGCACGTGCACACGACGTTGCGGCACTCGCGTTGAGAGGAAAATCGGCTTGTCTCAATTTTGCTGACTCAGCTTGGCGGTTTCCGATTCCATCGAGTAATGATCCGTCGGTGATCAGAGAAGCGGCGGCGAAGGCGGCGAAAGAATGTGAGTATGAAGAGTGCAATGTGAGTCGGGAAGAGGACGACGTGATTTTGAGTCAGCCAAAGGCGGAGCCTGATCAACGGGATGACGTCGACGATGAGGCTTTGTCGAATATGCCCATGTTGCTTGCCAGCATGGCGGAAGGACCTCTGCTTTCTCCTCCTCGTTTTTGCGTACGCGATGACGTGGGGTGGGACAACGTGGATACAAATGATGATGTGTCATTGTGGAGCTTTTAG

Protein sequence

MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVFKETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSACLNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDDVDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF

Homology

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BLAST of Cp4.1LG05g03760 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-49
Identity = 117/231 (50.65%), Postives = 154/231 (66.67%), Query Frame = 0


Query: 12  PYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVFKETRHPVYRGV 71
           P+Y  +    +S  ++SD  +P  V  +S+    LAS+ PK+RAGR+ F+ETRHP+YRGV
Sbjct: 3   PFYSTF---PDSFLSISDHRSP--VSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGV 62

Query: 72  RRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSACLNFADSAWRFP 131
           R+RN GKWVCE+REPNKK+RIWLGT+PT EMAARAHDVAALALRG+SACLNFADSAWR  
Sbjct: 63  RQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLR 122

Query: 132 IPSSNDPSVIREAAAKAAKECEYE---ECNVSREEDDVILSQPKAEPDQRDD-------- 191
           IP +  P  I++AA++AA   + E   E + +  E +    +   E ++R +        
Sbjct: 123 IPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFY 182

Query: 192 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTN--DDVSLWSF 230
           +DDEAL  MP    +MAEG LL PP      +VGW++ D +   DVSLWSF
Sbjct: 183 MDDEALLGMPNFFENMAEGMLLPPP------EVGWNHNDFDGVGDVSLWSF 222

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BLAST of Cp4.1LG05g03760 vs. ExPASy Swiss-Prot
Match: Q9SYS6 (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=DREB1C PE=1 SV=2)

HSP 1 Score: 194.5 bits (493), Expect = 1.3e-48
Identity = 112/212 (52.83%), Postives = 145/212 (68.40%), Query Frame = 0


Query: 28  SDAGTPPHVVANSDEEVILASNRPKRRAGRRVFKETRHPVYRGVRRRNKGKWVCELREPN 87
           SD  +P  V +  D    LA++ PK+ AGR+ F+ETRHP+YRGVR+RN GKWVCELREPN
Sbjct: 13  SDYESP--VSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPN 72

Query: 88  KKTRIWLGTYPTAEMAARAHDVAALALRGKSACLNFADSAWRFPIPSSNDPSVIREAAAK 147
           KKTRIWLGT+ TAEMAARAHDVAA+ALRG+SACLNFADSAWR  IP S     I++AAA+
Sbjct: 73  KKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQKAAAE 132

Query: 148 AAKECEYEECNVSREEDDVILSQPKAE----PDQRDD---VDDEALSNMPMLLASMAEGP 207
           AA   + E C+++ +   + + +   E    P+Q  D   +D+EA+  M  LL +MAEG 
Sbjct: 133 AALNFQDEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGM 192

Query: 208 LLSPPRFCVRDDVGWD---NVDTNDDVSLWSF 230
           LL  P       V W+   +V+ +DDVSLWS+
Sbjct: 193 LLPSP------SVQWNYNFDVEGDDDVSLWSY 216

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BLAST of Cp4.1LG05g03760 vs. ExPASy Swiss-Prot
Match: Q9M0L0 (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=DREB1A PE=1 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-47
Identity = 113/204 (55.39%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 36  VVANSDEEVILASNRPKRRAGRRVFKETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLG 95
           V +  D    LAS+ PK+ AGR+ F+ETRHP+YRGVRRRN GKWVCE+REPNKKTRIWLG
Sbjct: 19  VSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLG 78

Query: 96  TYPTAEMAARAHDVAALALRGKSACLNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYE 155
           T+ TAEMAARAHDVAALALRG+SACLNFADSAWR  IP S     I++AAA+AA   + E
Sbjct: 79  TFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDE 138

Query: 156 ECNVSRE-----EDDVILSQPKAEPDQRD-DVDDEALSNMPMLLASMAEGPLLSPPRFCV 215
            C+ + +     E+ ++ +   AE  +    + DEA+  MP LLA+MAEG LL  P    
Sbjct: 139 MCDATTDHGFDMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLLPLP---- 198

Query: 216 RDDVGWDN---VD-TNDDVSLWSF 230
              V W++   VD  +DDVSLWS+
Sbjct: 199 --SVQWNHNHEVDGDDDDVSLWSY 216

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BLAST of Cp4.1LG05g03760 vs. ExPASy Swiss-Prot
Match: Q9LN86 (Dehydration-responsive element-binding protein 1F OS=Arabidopsis thaliana OX=3702 GN=DREB1F PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-47
Identity = 114/210 (54.29%), Postives = 141/210 (67.14%), Query Frame = 0


Query: 40  SDEEVILASNRPKRRAGRRVFKETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPT 99
           +++++ILA  RPK+RAGRRVFKETRHPVYRG+RRRN  KWVCE+REP  + RIWLGTYPT
Sbjct: 2   NNDDIILAEMRPKKRAGRRVFKETRHPVYRGIRRRNGDKWVCEVREPTHQRRIWLGTYPT 61

Query: 100 AEMAARAHDVAALALRGKSACLNFADSAWRFPIPSSNDPSVIREAAAKAAK-----ECEY 159
           A+MAARAHDVA LALRG+SACLNFADSAWR P+P SNDP VIR  AA+AA+     + E 
Sbjct: 62  ADMAARAHDVAVLALRGRSACLNFADSAWRLPVPESNDPDVIRRVAAEAAEMFRPVDLES 121

Query: 160 EECNVSREEDDVIL-----SQPKAEPDQRDDV-----DDEALSNMPMLLASMAEGPLLSP 219
               +    DDV L     S   +  ++R+       D E +S   M L   AEGPL+SP
Sbjct: 122 GITVLPCAGDDVDLGFGSGSGSGSGSEERNSSSYGFGDYEEVSTTMMRL---AEGPLMSP 181

Query: 220 PRFCVRDDVGWDNVDTN-----DDVSLWSF 230
           PR    +D+   NV T      +D+SLWS+
Sbjct: 182 PR-SYMEDMTPTNVYTEEEMCYEDMSLWSY 207

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BLAST of Cp4.1LG05g03760 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 6.1e-46
Identity = 104/194 (53.61%), Postives = 134/194 (69.07%), Query Frame = 0


Query: 46  LASNRPKRRAGRRVFKETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAAR 105
           LA++ PK+ AGR+ F+ETRHP+YRGVR+RN GKWV E+REPNKKTRIWLGT+ TAEMAAR
Sbjct: 26  LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAAR 85

Query: 106 AHDVAALALRGKSACLNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDD 165
           AHDVAALALRG+SACLNFADSAWR  IP S     I++AAA+AA   + E C+ +     
Sbjct: 86  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG 145

Query: 166 VILSQPKAE----PDQRDD---VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWD-- 225
           + + +   E    P+Q +    +D+E +  MP LL +MAEG LL PP       V W+  
Sbjct: 146 LDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPP------SVQWNHN 205

Query: 226 -NVDTNDDVSLWSF 230
            + + + DVSLWS+
Sbjct: 206 YDGEGDGDVSLWSY 213

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BLAST of Cp4.1LG05g03760 vs. NCBI nr
Match: XP_023521506.1 (dehydration-responsive element-binding protein 1E-like [Cucurbita pepo subsp. pepo] >XP_023534203.1 dehydration-responsive element-binding protein 1E-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466 bits (1200), Expect = 7.11e-166
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60
           MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF
Sbjct: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60

Query: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD 180
           LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD
Sbjct: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD 180

Query: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF 229
           VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF
Sbjct: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF 229

[Close]

BLAST of Cp4.1LG05g03760 vs. NCBI nr
Match: KAG6606124.1 (Dehydration-responsive element-binding protein 1C, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036066.1 Dehydration-responsive element-binding protein 1C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 463 bits (1192), Expect = 1.18e-164
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60
           MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF
Sbjct: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60

Query: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD 180
           LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD
Sbjct: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD 180

Query: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF 229
           VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDV WDNVDTNDDVSLWSF
Sbjct: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVEWDNVDTNDDVSLWSF 229

[Close]

BLAST of Cp4.1LG05g03760 vs. NCBI nr
Match: XP_022958461.1 (dehydration-responsive element-binding protein 1E-like isoform X1 [Cucurbita moschata] >XP_022958462.1 dehydration-responsive element-binding protein 1E-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 457 bits (1175), Expect = 4.62e-162
Identity = 224/229 (97.82%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60
           MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF
Sbjct: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60

Query: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD 180
           LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREED+V+LSQPKAEPDQRD 
Sbjct: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDEVVLSQPKAEPDQRDY 180

Query: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF 229
           VDDEALSNMPMLLASMAEGPLLSPPRFC+RDDV WDNVDTNDDVSLWSF
Sbjct: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCLRDDVEWDNVDTNDDVSLWSF 229

[Close]

BLAST of Cp4.1LG05g03760 vs. NCBI nr
Match: XP_022995813.1 (dehydration-responsive element-binding protein 1C-like [Cucurbita maxima])

HSP 1 Score: 440 bits (1131), Expect = 2.36e-155
Identity = 219/229 (95.63%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60
           MDFFTQFSDPIPYYGNYN KSESSSTLSDAGTP HVVANSDEEVILASNRPKRRAGRRVF
Sbjct: 1   MDFFTQFSDPIPYYGNYNYKSESSSTLSDAGTPLHVVANSDEEVILASNRPKRRAGRRVF 60

Query: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTY TAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYLTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD 180
           LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREED+V+LSQPKAEPDQRD 
Sbjct: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDEVVLSQPKAEPDQRDY 180

Query: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF 229
           VDDEAL NMPMLLASMAEGPLLSPP FCVRDDV WD+VDTNDDVSLWSF
Sbjct: 181 VDDEALLNMPMLLASMAEGPLLSPPHFCVRDDVEWDDVDTNDDVSLWSF 229

[Close]

BLAST of Cp4.1LG05g03760 vs. NCBI nr
Match: XP_038906461.1 (dehydration-responsive element-binding protein 1E-like [Benincasa hispida])

HSP 1 Score: 374 bits (959), Expect = 3.99e-129
Identity = 188/230 (81.74%), Postives = 204/230 (88.70%), Query Frame = 0


Query: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVA-NSDEEVILASNRPKRRAGRRV 60
           M++F QFSDP+PYY + N KSESSSTLSDAGTPP  VA NSDEEVILASNRPKRRAGRRV
Sbjct: 1   MEWFAQFSDPLPYYAHCNYKSESSSTLSDAGTPPQTVAANSDEEVILASNRPKRRAGRRV 60

Query: 61  FKETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSA 120
           FKETRHPVYRGVRRRN  KWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSA
Sbjct: 61  FKETRHPVYRGVRRRNNDKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSA 120

Query: 121 CLNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRD 180
           CLNFADSAWRFP+P+S+DP+VIREAAA+AA EC+ EE NV REEDD +L Q  AEP+Q D
Sbjct: 121 CLNFADSAWRFPLPASDDPAVIREAAARAANECKDEEYNVGREEDDGVLGQATAEPNQPD 180

Query: 181 DVDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF 229
            +DDEA+SNMPMLLA MAEG LLSPP FCV DDV WD+V  +DDVSLWSF
Sbjct: 181 YIDDEAMSNMPMLLAGMAEGLLLSPPSFCVTDDVEWDDVAMSDDVSLWSF 230

[Close]

BLAST of Cp4.1LG05g03760 vs. ExPASy TrEMBL
Match: A0A6J1H1W9 (dehydration-responsive element-binding protein 1E-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459681 PE=4 SV=1)

HSP 1 Score: 457 bits (1175), Expect = 2.23e-162
Identity = 224/229 (97.82%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60
           MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF
Sbjct: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60

Query: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD 180
           LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREED+V+LSQPKAEPDQRD 
Sbjct: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDEVVLSQPKAEPDQRDY 180

Query: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF 229
           VDDEALSNMPMLLASMAEGPLLSPPRFC+RDDV WDNVDTNDDVSLWSF
Sbjct: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCLRDDVEWDNVDTNDDVSLWSF 229

[Close]

BLAST of Cp4.1LG05g03760 vs. ExPASy TrEMBL
Match: A0A6J1K939 (dehydration-responsive element-binding protein 1C-like OS=Cucurbita maxima OX=3661 GN=LOC111491237 PE=4 SV=1)

HSP 1 Score: 440 bits (1131), Expect = 1.14e-155
Identity = 219/229 (95.63%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60
           MDFFTQFSDPIPYYGNYN KSESSSTLSDAGTP HVVANSDEEVILASNRPKRRAGRRVF
Sbjct: 1   MDFFTQFSDPIPYYGNYNYKSESSSTLSDAGTPLHVVANSDEEVILASNRPKRRAGRRVF 60

Query: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTY TAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYLTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD 180
           LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREED+V+LSQPKAEPDQRD 
Sbjct: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDEVVLSQPKAEPDQRDY 180

Query: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF 229
           VDDEAL NMPMLLASMAEGPLLSPP FCVRDDV WD+VDTNDDVSLWSF
Sbjct: 181 VDDEALLNMPMLLASMAEGPLLSPPHFCVRDDVEWDDVDTNDDVSLWSF 229

[Close]

BLAST of Cp4.1LG05g03760 vs. ExPASy TrEMBL
Match: A0A5A7TJ39 (Dehydration-responsive element-binding protein 1E OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003010 PE=4 SV=1)

HSP 1 Score: 370 bits (950), Expect = 4.38e-128
Identity = 184/229 (80.35%), Postives = 201/229 (87.77%), Query Frame = 0


Query: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60
           MD+F QFSDP+PYY N + KSESSSTLSDAGTPP  V NSDEEVILASNRPKRRAGRR+F
Sbjct: 1   MDWFAQFSDPLPYYPNCSYKSESSSTLSDAGTPPQTVVNSDEEVILASNRPKRRAGRRIF 60

Query: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVR+RN  KWVCELREPNKKTRIWLGTYPTAEMAARAHD+AALALRGKSAC
Sbjct: 61  KETRHPVYRGVRQRNNDKWVCELREPNKKTRIWLGTYPTAEMAARAHDIAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD 180
           LNFADSAWRFPIP+S+DP+VIREAA +AA E   EECNV REEDD   +Q +A PD+ D 
Sbjct: 121 LNFADSAWRFPIPASDDPAVIREAAVRAANEGRDEECNVGREEDDGGSNQQEAYPDRTDY 180

Query: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF 229
           VDDE +SNMPMLLA+MAEG LLSPP FCV +DV WD+V TNDDVSLWSF
Sbjct: 181 VDDETMSNMPMLLANMAEGLLLSPPSFCVNEDVEWDDVATNDDVSLWSF 229

[Close]

BLAST of Cp4.1LG05g03760 vs. ExPASy TrEMBL
Match: A0A1S3ATG1 (dehydration-responsive element-binding protein 1E OS=Cucumis melo OX=3656 GN=LOC103482707 PE=4 SV=1)

HSP 1 Score: 370 bits (950), Expect = 4.38e-128
Identity = 184/229 (80.35%), Postives = 201/229 (87.77%), Query Frame = 0


Query: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60
           MD+F QFSDP+PYY N + KSESSSTLSDAGTPP  V NSDEEVILASNRPKRRAGRR+F
Sbjct: 1   MDWFAQFSDPLPYYPNCSYKSESSSTLSDAGTPPQTVVNSDEEVILASNRPKRRAGRRIF 60

Query: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVR+RN  KWVCELREPNKKTRIWLGTYPTAEMAARAHD+AALALRGKSAC
Sbjct: 61  KETRHPVYRGVRQRNNDKWVCELREPNKKTRIWLGTYPTAEMAARAHDIAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD 180
           LNFADSAWRFPIP+S+DP+VIREAA +AA E   EECNV REEDD   +Q +A PD+ D 
Sbjct: 121 LNFADSAWRFPIPASDDPAVIREAAVRAANEGRDEECNVGREEDDGGSNQQEAYPDRTDY 180

Query: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF 229
           VDDE +SNMPMLLA+MAEG LLSPP FCV +DV WD+V TNDDVSLWSF
Sbjct: 181 VDDETMSNMPMLLANMAEGLLLSPPSFCVNEDVEWDDVATNDDVSLWSF 229

[Close]

BLAST of Cp4.1LG05g03760 vs. ExPASy TrEMBL
Match: A0A6J1E8J8 (dehydration-responsive element-binding protein 1A-like OS=Cucurbita moschata OX=3662 GN=LOC111430380 PE=4 SV=1)

HSP 1 Score: 365 bits (937), Expect = 4.19e-126
Identity = 184/229 (80.35%), Postives = 196/229 (85.59%), Query Frame = 0


Query: 1   MDFFTQFSDPIPYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVF 60
           MD F+QFSDP+PYYGN N  SESSS   DAGT P  VA SDEEVILASN+PKR AGRRVF
Sbjct: 1   MDLFSQFSDPLPYYGNCNYNSESSSAFFDAGTHPLTVATSDEEVILASNQPKRPAGRRVF 60

Query: 61  KETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120
           KETRHPVYRGVRRRN  KWVCE+REPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC
Sbjct: 61  KETRHPVYRGVRRRNNDKWVCEMREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSAC 120

Query: 121 LNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVSREEDDVILSQPKAEPDQRDD 180
           LNFADSAWRFPIP+S+DPSVIR AAA AA EC+ EECN  REEDDV+L QP A PDQ   
Sbjct: 121 LNFADSAWRFPIPASDDPSVIRAAAAMAANECKDEECNACREEDDVVLCQPTASPDQPVY 180

Query: 181 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTNDDVSLWSF 229
           VDDEALSNMPMLLA+MAEG LLSPP FCV DDV WD+V  + DVSLW+F
Sbjct: 181 VDDEALSNMPMLLANMAEGLLLSPPSFCVNDDVEWDDVAMSHDVSLWNF 229

[Close]

BLAST of Cp4.1LG05g03760 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-50
Identity = 117/231 (50.65%), Postives = 154/231 (66.67%), Query Frame = 0


Query: 12  PYYGNYNCKSESSSTLSDAGTPPHVVANSDEEVILASNRPKRRAGRRVFKETRHPVYRGV 71
           P+Y  +    +S  ++SD  +P  V  +S+    LAS+ PK+RAGR+ F+ETRHP+YRGV
Sbjct: 3   PFYSTF---PDSFLSISDHRSP--VSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGV 62

Query: 72  RRRNKGKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKSACLNFADSAWRFP 131
           R+RN GKWVCE+REPNKK+RIWLGT+PT EMAARAHDVAALALRG+SACLNFADSAWR  
Sbjct: 63  RQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLR 122

Query: 132 IPSSNDPSVIREAAAKAAKECEYE---ECNVSREEDDVILSQPKAEPDQRDD-------- 191
           IP +  P  I++AA++AA   + E   E + +  E +    +   E ++R +        
Sbjct: 123 IPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFY 182

Query: 192 VDDEALSNMPMLLASMAEGPLLSPPRFCVRDDVGWDNVDTN--DDVSLWSF 230
           +DDEAL  MP    +MAEG LL PP      +VGW++ D +   DVSLWSF
Sbjct: 183 MDDEALLGMPNFFENMAEGMLLPPP------EVGWNHNDFDGVGDVSLWSF 222

[Close]

BLAST of Cp4.1LG05g03760 vs. TAIR 10
Match: AT4G25470.1 (C-repeat/DRE binding factor 2 )

HSP 1 Score: 194.5 bits (493), Expect = 9.3e-50
Identity = 112/212 (52.83%), Postives = 145/212 (68.40%), Query Frame = 0


Query: 28  SDAGTPPHVVANSDEEVILASNRPKRRAGRRVFKETRHPVYRGVRRRNKGKWVCELREPN 87
           SD  +P  V +  D    LA++ PK+ AGR+ F+ETRHP+YRGVR+RN GKWVCELREPN
Sbjct: 13  SDYESP--VSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPN 72

Query: 88  KKTRIWLGTYPTAEMAARAHDVAALALRGKSACLNFADSAWRFPIPSSNDPSVIREAAAK 147
           KKTRIWLGT+ TAEMAARAHDVAA+ALRG+SACLNFADSAWR  IP S     I++AAA+
Sbjct: 73  KKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQKAAAE 132

Query: 148 AAKECEYEECNVSREEDDVILSQPKAE----PDQRDD---VDDEALSNMPMLLASMAEGP 207
           AA   + E C+++ +   + + +   E    P+Q  D   +D+EA+  M  LL +MAEG 
Sbjct: 133 AALNFQDEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGM 192

Query: 208 LLSPPRFCVRDDVGWD---NVDTNDDVSLWSF 230
           LL  P       V W+   +V+ +DDVSLWS+
Sbjct: 193 LLPSP------SVQWNYNFDVEGDDDVSLWSY 216

[Close]

BLAST of Cp4.1LG05g03760 vs. TAIR 10
Match: AT1G12610.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-48
Identity = 114/210 (54.29%), Postives = 141/210 (67.14%), Query Frame = 0


Query: 40  SDEEVILASNRPKRRAGRRVFKETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPT 99
           +++++ILA  RPK+RAGRRVFKETRHPVYRG+RRRN  KWVCE+REP  + RIWLGTYPT
Sbjct: 2   NNDDIILAEMRPKKRAGRRVFKETRHPVYRGIRRRNGDKWVCEVREPTHQRRIWLGTYPT 61

Query: 100 AEMAARAHDVAALALRGKSACLNFADSAWRFPIPSSNDPSVIREAAAKAAK-----ECEY 159
           A+MAARAHDVA LALRG+SACLNFADSAWR P+P SNDP VIR  AA+AA+     + E 
Sbjct: 62  ADMAARAHDVAVLALRGRSACLNFADSAWRLPVPESNDPDVIRRVAAEAAEMFRPVDLES 121

Query: 160 EECNVSREEDDVIL-----SQPKAEPDQRDDV-----DDEALSNMPMLLASMAEGPLLSP 219
               +    DDV L     S   +  ++R+       D E +S   M L   AEGPL+SP
Sbjct: 122 GITVLPCAGDDVDLGFGSGSGSGSGSEERNSSSYGFGDYEEVSTTMMRL---AEGPLMSP 181

Query: 220 PRFCVRDDVGWDNVDTN-----DDVSLWSF 230
           PR    +D+   NV T      +D+SLWS+
Sbjct: 182 PR-SYMEDMTPTNVYTEEEMCYEDMSLWSY 207

[Close]

BLAST of Cp4.1LG05g03760 vs. TAIR 10
Match: AT4G25480.1 (dehydration response element B1A )

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-48
Identity = 113/204 (55.39%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 36  VVANSDEEVILASNRPKRRAGRRVFKETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLG 95
           V +  D    LAS+ PK+ AGR+ F+ETRHP+YRGVRRRN GKWVCE+REPNKKTRIWLG
Sbjct: 19  VSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLG 78

Query: 96  TYPTAEMAARAHDVAALALRGKSACLNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYE 155
           T+ TAEMAARAHDVAALALRG+SACLNFADSAWR  IP S     I++AAA+AA   + E
Sbjct: 79  TFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDE 138

Query: 156 ECNVSRE-----EDDVILSQPKAEPDQRD-DVDDEALSNMPMLLASMAEGPLLSPPRFCV 215
            C+ + +     E+ ++ +   AE  +    + DEA+  MP LLA+MAEG LL  P    
Sbjct: 139 MCDATTDHGFDMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLLPLP---- 198

Query: 216 RDDVGWDN---VD-TNDDVSLWSF 230
              V W++   VD  +DDVSLWS+
Sbjct: 199 --SVQWNHNHEVDGDDDDVSLWSY 216

[Close]

BLAST of Cp4.1LG05g03760 vs. TAIR 10
Match: AT1G63030.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 185.7 bits (470), Expect = 4.3e-47
Identity = 100/191 (52.36%), Postives = 128/191 (67.02%), Query Frame = 0


Query: 41  DEEVILASNRPKRRAGRRVFKETRHPVYRGVRRRNKGKWVCELREPNKKTRIWLGTYPTA 100
           ++++ +A  +PK+RAGRR+FKETRHP+YRGVRRR+  KWVCE+REP  + R+WLGTYPTA
Sbjct: 3   NDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTA 62

Query: 101 EMAARAHDVAALALRGKSACLNFADSAWRFPIPSSNDPSVIREAAAKAAKECEYEECNVS 160
           +MAARAHDVA LALRG+SACLNF+DSAWR P+P+S DP  IR  AA+AA+     E +  
Sbjct: 63  DMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFSTG 122

Query: 161 REEDDVILSQPKAEPDQRDDVDDEALSNMPMLLASMAEGPLLSPPRFCV--RDDVGWDNV 220
                 I   P A      D  DE ++ M M L   AE PL+SPPR  +     V  D  
Sbjct: 123 ------ITVLPSA---SEFDTSDEGVAGMMMRL---AEEPLMSPPRSYIDMNTSVYVDEE 181

Query: 221 DTNDDVSLWSF 230
              +D+SLWS+
Sbjct: 183 MCYEDLSLWSY 181

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g03760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ93	1.5e-49	50.65	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
Q9SYS6	1.3e-48	52.83	Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=370...	[more]
Q9M0L0	1.4e-47	55.39	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=370...	[more]
Q9LN86	1.4e-47	54.29	Dehydration-responsive element-binding protein 1F OS=Arabidopsis thaliana OX=370...	[more]
P93835	6.1e-46	53.61	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Cp4.1LG05g03760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521506.1	7.11e-166	100.00	dehydration-responsive element-binding protein 1E-like [Cucurbita pepo subsp. pe...	[more]
KAG6606124.1	1.18e-164	99.56	Dehydration-responsive element-binding protein 1C, partial [Cucurbita argyrosper...	[more]
XP_022958461.1	4.62e-162	97.82	dehydration-responsive element-binding protein 1E-like isoform X1 [Cucurbita mos...	[more]
XP_022995813.1	2.36e-155	95.63	dehydration-responsive element-binding protein 1C-like [Cucurbita maxima]	[more]
XP_038906461.1	3.99e-129	81.74	dehydration-responsive element-binding protein 1E-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG05g03760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1W9	2.23e-162	97.82	dehydration-responsive element-binding protein 1E-like isoform X1 OS=Cucurbita m...	[more]
A0A6J1K939	1.14e-155	95.63	dehydration-responsive element-binding protein 1C-like OS=Cucurbita maxima OX=36...	[more]
A0A5A7TJ39	4.38e-128	80.35	Dehydration-responsive element-binding protein 1E OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3ATG1	4.38e-128	80.35	dehydration-responsive element-binding protein 1E OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1E8J8	4.19e-126	80.35	dehydration-responsive element-binding protein 1A-like OS=Cucurbita moschata OX=...	[more]

BLAST of Cp4.1LG05g03760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51990.1	1.1e-50	50.65	C-repeat-binding factor 4	[more]
AT4G25470.1	9.3e-50	52.83	C-repeat/DRE binding factor 2	[more]
AT1G12610.1	1.0e-48	54.29	Integrase-type DNA-binding superfamily protein	[more]
AT4G25480.1	1.0e-48	55.39	dehydration response element B1A	[more]
AT1G63030.1	4.3e-47	52.36	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 68..79 score: 65.15 coord: 90..106 score: 67.06
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 67..130 e-value: 3.3E-29 score: 113.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 66..116 e-value: 1.0E-15 score: 57.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 67..124 score: 22.629026
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 68..126 e-value: 7.61189E-32 score: 108.898
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 67..125 e-value: 6.6E-24 score: 85.8
None	No IPR available	PANTHER	PTHR31839	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D	coord: 1..229
None	No IPR available	PANTHER	PTHR31839:SF64	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1F	coord: 1..229
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 67..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g03760.1	Cp4.1LG05g03760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity