Cp4.1LG05g03510 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTTTTTATTCCCGAAGATTACGTCACTCGCCGTCGCATCGAGAAACAAGCCGCCGCCAAGGAGAGGCGGCCGGAGCCCATCAAAGGACGCGCCCTCCGGCCAACTTCCGAGAAGGAGAAGTCTGTCGACGCTGGAAAAACGGGATTCCGGTTGGGTCACACCGGCTCAGACAATGTGGTTTACACTTGCTTCTCTGCCTGA ATGGATGTTTTTATTCCCGAAGATTACGTCACTCGCCGTCGCATCGAGAAACAAGCCGCCGCCAAGGAGAGGCGGCCGGAGCCCATCAAAGGACGCGCCCTCCGGCCAACTTCCGAGAAGGAGAAGTCTGTCGACGCTGGAAAAACGGGATTCCGGTTGGGTCACACCGGCTCAGACAATGTGGTTTACACTTGCTTCTCTGCCTGA ATGGATGTTTTTATTCCCGAAGATTACGTCACTCGCCGTCGCATCGAGAAACAAGCCGCCGCCAAGGAGAGGCGGCCGGAGCCCATCAAAGGACGCGCCCTCCGGCCAACTTCCGAGAAGGAGAAGTCTGTCGACGCTGGAAAAACGGGATTCCGGTTGGGTCACACCGGCTCAGACAATGTGGTTTACACTTGCTTCTCTGCCTGA MDVFIPEDYVTRRRIEKQAAAKERRPEPIKGRALRPTSEKEKSVDAGKTGFRLGHTGSDNVVYTCFSA Homology
BLAST of Cp4.1LG05g03510 vs. NCBI nr
Match: KAG6606110.1 (hypothetical protein SDJN03_03427, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 99.0 bits (245), Expect = 2.92e-25 Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of Cp4.1LG05g03510 vs. NCBI nr
Match: KAE8647863.1 (hypothetical protein Csa_000530 [Cucumis sativus]) HSP 1 Score: 62.0 bits (149), Expect = 4.61e-10 Identity = 42/73 (57.53%), Postives = 47/73 (64.38%), Query Frame = 0
BLAST of Cp4.1LG05g03510 vs. NCBI nr
Match: ESR52799.1 (hypothetical protein CICLE_v10023197mg [Citrus clementina] >KDO76203.1 hypothetical protein CISIN_1g042803mg [Citrus sinensis]) HSP 1 Score: 44.3 bits (103), Expect = 8.91e-04 Identity = 35/76 (46.05%), Postives = 41/76 (53.95%), Query Frame = 0
BLAST of Cp4.1LG05g03510 vs. NCBI nr
Match: KAE8055295.1 (hypothetical protein FH972_012146 [Carpinus fangiana]) HSP 1 Score: 44.3 bits (103), Expect = 9.93e-04 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of Cp4.1LG05g03510 vs. ExPASy TrEMBL
Match: A0A0A0KKA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154820 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 4.35e-11 Identity = 42/73 (57.53%), Postives = 47/73 (64.38%), Query Frame = 0
BLAST of Cp4.1LG05g03510 vs. ExPASy TrEMBL
Match: A0A067G992 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g042803mg PE=4 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 4.31e-04 Identity = 35/76 (46.05%), Postives = 41/76 (53.95%), Query Frame = 0
BLAST of Cp4.1LG05g03510 vs. ExPASy TrEMBL
Match: V4VJD7 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10023197mg PE=4 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 4.31e-04 Identity = 35/76 (46.05%), Postives = 41/76 (53.95%), Query Frame = 0
BLAST of Cp4.1LG05g03510 vs. ExPASy TrEMBL
Match: A0A5N6R596 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_012146 PE=4 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 4.81e-04 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of Cp4.1LG05g03510 vs. ExPASy TrEMBL
Match: A0A2R6QK64 (Centrosome and spindle pole associated protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16784 PE=4 SV=1) HSP 1 Score: 43.5 bits (101), Expect = 9.65e-04 Identity = 29/76 (38.16%), Postives = 41/76 (53.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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