Cp4.1LG05g02930 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG05g02930
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG05: 2184379 .. 2184831 (+)
RNA-Seq ExpressionCp4.1LG05g02930
SyntenyCp4.1LG05g02930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTTCATTCTTTCAACTCCAAAGTTCCCGTCTTCATGTCTCCAGTTTGTATGCAAGTATACCAAGGTTAGCTATTTCGTCCCAAACACTCCAGTCTTCCTCAGGTTCCTTCCATTTGAAACTGAATTGGCTGCCTTAGTTTCATCATTTAGAATTGAGATTCCTTAAGATTCTAGTATTTTTCTCTAAATTTTGCAGAGCTTTACGTTGCCGGATGTCCTGTTTTGTACTGAATCATTTGTTGGGCTGCTTATCATTCATGTAGATAAGTTTAGGTCTGTGGGAATTCGATTGTTTATATTATATTTGTGGGTTCTTGTTACGTTCTTCCTTGGAGCTCATTGATTGATAATTCAAGTTTCACAATCTCTAAACATTCAGGTCAGGCTCCACTTGAGCTAAAATCTTTGATTTTCTCATGCATACGAATATTGCAACGCTTATAAAAA

mRNA sequence

ATGGTTTTTCATTCTTTCAACTCCAAAGTTCCCGTCTTCATGTCTCCAGTTTGTATGCAAAGCTTTACGTTGCCGGATGTCCTGTTTTGTACTGAATCATTTGTTGGGCTGCTTATCATTCATGTAGATAAGTTTAGGTCTGTGGGAATTCGATTGTTTATATTATATTTGTGGGTTCTTGTTACGTTCTTCCTTGGAGCTCATTGATTGATAATTCAAGTTTCACAATCTCTAAACATTCAGGTCAGGCTCCACTTGAGCTAAAATCTTTGATTTTCTCATGCATACGAATATTGCAACGCTTATAAAAA

Coding sequence (CDS)

ATGGTTTTTCATTCTTTCAACTCCAAAGTTCCCGTCTTCATGTCTCCAGTTTGTATGCAAAGCTTTACGTTGCCGGATGTCCTGTTTTGTACTGAATCATTTGTTGGGCTGCTTATCATTCATGTAGATAAGTTTAGGTCTGTGGGAATTCGATTGTTTATATTATATTTGTGGGTTCTTGTTACGTTCTTCCTTGGAGCTCATTGA

Protein sequence

MVFHSFNSKVPVFMSPVCMQSFTLPDVLFCTESFVGLLIIHVDKFRSVGIRLFILYLWVLVTFFLGAH
Homology
[Close]
BLAST of Cp4.1LG05g02930 vs. NCBI nr
Match: KAG7035990.1 (hypothetical protein SDJN02_02790 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 53.1 bits (126), Expect = 6.02e-07
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0 

Query: 20 QSFTLPDVLFCTESFVGLLIIHVDKFRS 47
          +SFTL DVLFCTESFVGLLIIHVDKFR+
Sbjct: 29 KSFTLLDVLFCTESFVGLLIIHVDKFRA 56

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g02930 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g02930 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7035990.16.02e-0789.29hypothetical protein SDJN02_02790 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Cp4.1LG05g02930 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g02930 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g02930.1Cp4.1LG05g02930.1mRNA