Cp4.1LG05g02880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g02880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	auxin-responsive protein SAUR50-like
Location	Cp4.1LG05: 2175623 .. 2176027 (+)
RNA-Seq Expression	Cp4.1LG05g02880
Synteny	Cp4.1LG05g02880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAGCCTGAGGCCAGTGCCAAGAAGAATGGCATTGTGAAGCTGAAGACTGCTGTTGGGAGGCTGCAGAGGAGCCTCTCCTTGGGTCGAAGGTCCAATTCTGGGCTACACGAGTTCGATCATGAACTTGGGGATGACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGCCATTTCGCGGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGATTTGTTGTTCCGTTGAGTTGCTTGAATAATCCGACGTTTTTGAGACTTTTGGAGGCAGCAGCAGAGGAGTATGGATTTGATCATGAGGGTGCGCTGACGATCCCGTGTCGACCGAGCGAGCTCGAGAGGATCTTGGCTGAGGAATGGGAGGAGGAGGAGGAGGAGAATGAGAATCGCTGCTTTTGA

mRNA sequence

ATGGCTAAGCCTGAGGCCAGTGCCAAGAAGAATGGCATTGTGAAGCTGAAGACTGCTGTTGGGAGGCTGCAGAGGAGCCTCTCCTTGGGTCGAAGGTCCAATTCTGGGCTACACGAGTTCGATCATGAACTTGGGGATGACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGCCATTTCGCGGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGATTTGTTGTTCCGTTGAGTTGCTTGAATAATCCGACGTTTTTGAGACTTTTGGAGGCAGCAGCAGAGGAGTATGGATTTGATCATGAGGGTGCGCTGACGATCCCGTGTCGACCGAGCGAGCTCGAGAGGATCTTGGCTGAGGAATGGGAGGAGGAGGAGGAGGAGAATGAGAATCGCTGCTTTTGA

Coding sequence (CDS)

ATGGCTAAGCCTGAGGCCAGTGCCAAGAAGAATGGCATTGTGAAGCTGAAGACTGCTGTTGGGAGGCTGCAGAGGAGCCTCTCCTTGGGTCGAAGGTCCAATTCTGGGCTACACGAGTTCGATCATGAACTTGGGGATGACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGCCATTTCGCGGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGATTTGTTGTTCCGTTGAGTTGCTTGAATAATCCGACGTTTTTGAGACTTTTGGAGGCAGCAGCAGAGGAGTATGGATTTGATCATGAGGGTGCGCTGACGATCCCGTGTCGACCGAGCGAGCTCGAGAGGATCTTGGCTGAGGAATGGGAGGAGGAGGAGGAGGAGAATGAGAATCGCTGCTTTTGA

Protein sequence

MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAEEWEEEEEENENRCF

Homology

[Close]

BLAST of Cp4.1LG05g02880 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.2e-11
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 23  LQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLN 82
           L+R  SLG+++  G         D+D  P+  DV +GHF V     E   R++VP+S L 
Sbjct: 20  LKRCSSLGKKNGGGY--------DEDCLPL--DVPKGHFPVYV--GENRSRYIVPISFLT 79

Query: 83  NPTFLRLLEAAAEEYGFDHEGALTIPC 110
           +P F  LL+ A EE+GFDH+  LTIPC
Sbjct: 80  HPEFQSLLQRAEEEFGFDHDMGLTIPC 94

[Close]

BLAST of Cp4.1LG05g02880 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 28/65 (43.08%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 46  DDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGAL 105
           ++D + +P DV +GHF V     E   R++VP+SCL++PTF  LL+ + EE+GF+H+  +
Sbjct: 29  NNDDSGLPNDVPKGHFVVYV--GERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGI 88

Query: 106 TIPCR 111
            IPC+
Sbjct: 89  IIPCQ 91

[Close]

BLAST of Cp4.1LG05g02880 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 54  EDVKEGHFAV-VAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPS 113
           +DV +G  A+ V    EE +RF+VP+   N+P F++LL+ A +EYGFD +G +TIPC   
Sbjct: 22  KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 114 ELERILA 120
           E   + A
Sbjct: 82  EFRYVQA 88

[Close]

BLAST of Cp4.1LG05g02880 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.9e-09
Identity = 40/106 (37.74%), Postives = 54/106 (50.94%), Query Frame = 0


Query: 13  IVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAV-VAVDAEEP 72
           + KLK+   RL++S        S     DH+  D    PVP     GH A+ V     + 
Sbjct: 44  LAKLKSWGQRLKQSFRRRSTRRSAYIPVDHKKAD----PVP----RGHLAIYVGQKDGDC 103

Query: 73  KRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERI 118
            R +VP+   N+P F  LL  A +EYGF HEG +TIPC  S+ ER+
Sbjct: 104 HRVLVPIVYFNHPLFGELLREAEKEYGFCHEGGITIPCLYSDFERV 141

[Close]

BLAST of Cp4.1LG05g02880 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 55  DVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHE-GALTIPCRPSE 114
           DV +G+ AV   D  + +RF +P+S LN P+F  LL  A EE+G+DH  G LTIPC+  E
Sbjct: 25  DVPKGYAAVYVGD--KMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEE 84

Query: 115 LERILA 120
              + A
Sbjct: 85  FLNVTA 88

[Close]

BLAST of Cp4.1LG05g02880 vs. NCBI nr
Match: XP_023521419.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo] >XP_023532983.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268 bits (684), Expect = 2.52e-90
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60
           MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH
Sbjct: 1   MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60

Query: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120
           FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE
Sbjct: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120

Query: 121 EWEEEEEENENRCF 134
           EWEEEEEENENRCF
Sbjct: 121 EWEEEEEENENRCF 134

[Close]

BLAST of Cp4.1LG05g02880 vs. NCBI nr
Match: XP_022958473.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >KAG7035992.1 hypothetical protein SDJN02_02792, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260 bits (665), Expect = 1.93e-87
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60
           MAKPEAS KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH
Sbjct: 1   MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60

Query: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120
           FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE
Sbjct: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120

Query: 121 EWEEEEEENENRCF 134
           EWEEEEE NENRCF
Sbjct: 121 EWEEEEE-NENRCF 133

[Close]

BLAST of Cp4.1LG05g02880 vs. NCBI nr
Match: KAG6606040.1 (hypothetical protein SDJN03_03357, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258 bits (660), Expect = 1.08e-86
Identity = 131/134 (97.76%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60
           MAKPEAS KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH
Sbjct: 1   MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60

Query: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120
           FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE
Sbjct: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120

Query: 121 EWEEEEEENENRCF 134
           EWEEEE  NENRCF
Sbjct: 121 EWEEEE--NENRCF 132

[Close]

BLAST of Cp4.1LG05g02880 vs. NCBI nr
Match: XP_022996166.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 257 bits (657), Expect = 3.20e-86
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60
           MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFD E+GDDDSTPVPEDVKEGH
Sbjct: 1   MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDREVGDDDSTPVPEDVKEGH 60

Query: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120
           FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALT+PCRPSELERILAE
Sbjct: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAE 120

Query: 121 EWEEEEEENENRCF 134
           EWEEEEE NENRCF
Sbjct: 121 EWEEEEE-NENRCF 133

[Close]

BLAST of Cp4.1LG05g02880 vs. NCBI nr
Match: XP_038902788.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 219 bits (558), Expect = 4.26e-71
Identity = 110/121 (90.91%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 9   KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDA 68
           KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D+E+GDD+STPVPEDVKEGHFAVVAVDA
Sbjct: 10  KKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDESTPVPEDVKEGHFAVVAVDA 69

Query: 69  EEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAEEWEEEEEE 128
           EEPKRFVVPLSCL NPTFLRLLEAAAEEYGFDHEGALT+PCRPSELERILAEEW EEEEE
Sbjct: 70  EEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAEEWVEEEEE 129

[Close]

BLAST of Cp4.1LG05g02880 vs. ExPASy TrEMBL
Match: A0A6J1H360 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111459689 PE=3 SV=1)

HSP 1 Score: 260 bits (665), Expect = 9.32e-88
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60
           MAKPEAS KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH
Sbjct: 1   MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60

Query: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120
           FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE
Sbjct: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120

Query: 121 EWEEEEEENENRCF 134
           EWEEEEE NENRCF
Sbjct: 121 EWEEEEE-NENRCF 133

[Close]

BLAST of Cp4.1LG05g02880 vs. ExPASy TrEMBL
Match: A0A6J1K3Y0 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111491474 PE=3 SV=1)

HSP 1 Score: 257 bits (657), Expect = 1.55e-86
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60
           MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFD E+GDDDSTPVPEDVKEGH
Sbjct: 1   MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDREVGDDDSTPVPEDVKEGH 60

Query: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120
           FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALT+PCRPSELERILAE
Sbjct: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAE 120

Query: 121 EWEEEEEENENRCF 134
           EWEEEEE NENRCF
Sbjct: 121 EWEEEEE-NENRCF 133

[Close]

BLAST of Cp4.1LG05g02880 vs. ExPASy TrEMBL
Match: A0A0A0KGI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1)

HSP 1 Score: 212 bits (540), Expect = 1.14e-68
Identity = 109/122 (89.34%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 9   KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDS-TPVPEDVKEGHFAVVAVD 68
           KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D+ +GDD+S TPVPEDVKEGHFAVVAVD
Sbjct: 10  KKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKEGHFAVVAVD 69

Query: 69  AEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAEEWEEEEE 128
           AEEPKRFVVPLSCL NPTFLRLLEAAAEEYGFDHEGALT+PCRPSELERILAEEW EEEE
Sbjct: 70  AEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAEEWVEEEE 129

[Close]

BLAST of Cp4.1LG05g02880 vs. ExPASy TrEMBL
Match: A0A5D3DFC2 (Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00110 PE=3 SV=1)

HSP 1 Score: 211 bits (536), Expect = 4.97e-68
Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 9   KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDD-DSTPVPEDVKEGHFAVVAVD 68
           KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D E+GDD  ST VPEDVKEGHFAVVAVD
Sbjct: 10  KKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKEGHFAVVAVD 69

Query: 69  AEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAEEWEEEEE 128
           AEEPKRFVVPLSCL NPTFLRLLEAAAEEYGF+HEGALT+PCRPSELERILAEEW EEEE
Sbjct: 70  AEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERILAEEWVEEEE 129

Query: 129 ENENRCF 134
           + EN C 
Sbjct: 130 DEENGCI 136

[Close]

BLAST of Cp4.1LG05g02880 vs. ExPASy TrEMBL
Match: A0A1S3CNL2 (auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=3 SV=1)

HSP 1 Score: 211 bits (536), Expect = 4.97e-68
Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 9   KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDD-DSTPVPEDVKEGHFAVVAVD 68
           KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D E+GDD  ST VPEDVKEGHFAVVAVD
Sbjct: 10  KKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKEGHFAVVAVD 69

Query: 69  AEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAEEWEEEEE 128
           AEEPKRFVVPLSCL NPTFLRLLEAAAEEYGF+HEGALT+PCRPSELERILAEEW EEEE
Sbjct: 70  AEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERILAEEWVEEEE 129

Query: 129 ENENRCF 134
           + EN C 
Sbjct: 130 DEENGCI 136

[Close]

BLAST of Cp4.1LG05g02880 vs. TAIR 10
Match: AT2G28085.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.8 bits (260), Expect = 5.6e-23
Identity = 58/116 (50.00%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 9   KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDA 68
           K  GIVKLK  V RL +             E+  +        VP+DVKEGHFAV+AVD 
Sbjct: 15  KMGGIVKLKNVVERLVQIKGFSSAKKPCPEEYGRDC-------VPKDVKEGHFAVIAVDG 74

Query: 69  --EEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAEEW 123
             E  +RFVVPL  L +P F +LLE A EEYGF H+GAL +PCRPS L  IL E+W
Sbjct: 75  YHEPTQRFVVPLMFLEHPMFRKLLEQAEEEYGFYHDGALMVPCRPSHLRMILTEQW 123

[Close]

BLAST of Cp4.1LG05g02880 vs. TAIR 10
Match: AT3G09870.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 88.2 bits (217), Expect = 5.5e-18
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 39  EFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYG 98
           EF+ E   + ++ +P DVKEGH AV+AV  E  KRFV+ L  LN P FLRLLE A EE+G
Sbjct: 30  EFEEE--GNAASMIPSDVKEGHVAVIAVKGERIKRFVLELEELNKPEFLRLLEQAREEFG 89

Query: 99  FDHEGALTIPCRPSELERIL 119
           F   G LTIPC+P E+++IL
Sbjct: 90  FQPRGPLTIPCQPEEVQKIL 107

[Close]

BLAST of Cp4.1LG05g02880 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.2 bits (165), Expect = 5.9e-12
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 23  LQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLN 82
           L+R  SLG+++  G         D+D  P+  DV +GHF V     E   R++VP+S L 
Sbjct: 20  LKRCSSLGKKNGGGY--------DEDCLPL--DVPKGHFPVYV--GENRSRYIVPISFLT 79

Query: 83  NPTFLRLLEAAAEEYGFDHEGALTIPC 110
           +P F  LL+ A EE+GFDH+  LTIPC
Sbjct: 80  HPEFQSLLQRAEEEFGFDHDMGLTIPC 94

[Close]

BLAST of Cp4.1LG05g02880 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 64.7 bits (156), Expect = 6.5e-11
Identity = 36/87 (41.38%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 23  LQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLN 82
           L+R  SLG++ +S  ++     GD     +P DV +GHF V         R+V+P+S L 
Sbjct: 19  LKRCSSLGKKQSSEYNDTHEHDGDS----LPLDVPKGHFVVYV--GGNRVRYVLPISFLT 78

Query: 83  NPTFLRLLEAAAEEYGFDHEGALTIPC 110
            P F  LL+ A EE+GFDH   LTIPC
Sbjct: 79  RPEFQLLLQQAEEEFGFDHNMGLTIPC 99

[Close]

BLAST of Cp4.1LG05g02880 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 54  EDVKEGHFAV-VAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPS 113
           +DV +G  A+ V    EE +RF+VP+   N+P F++LL+ A +EYGFD +G +TIPC   
Sbjct: 22  KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 114 ELERILA 120
           E   + A
Sbjct: 82  EFRYVQA 88

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g02880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	8.2e-11	42.53	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P0DKL1	1.4e-10	43.08	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
Q9ZUZ3	1.6e-09	43.28	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
O22150	5.9e-09	37.74	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 S...	[more]
P33079	2.9e-08	45.45	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Cp4.1LG05g02880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521419.1	2.52e-90	100.00	auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo] >XP_023532983....	[more]
XP_022958473.1	1.93e-87	98.51	auxin-responsive protein SAUR50-like [Cucurbita moschata] >KAG7035992.1 hypothet...	[more]
KAG6606040.1	1.08e-86	97.76	hypothetical protein SDJN03_03357, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022996166.1	3.20e-86	97.01	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
XP_038902788.1	4.26e-71	90.91	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG05g02880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H360	9.32e-88	98.51	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114596...	[more]
A0A6J1K3Y0	1.55e-86	97.01	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111491474...	[more]
A0A0A0KGI2	1.14e-68	89.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1	[more]
A0A5D3DFC2	4.97e-68	85.83	Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CNL2	4.97e-68	85.83	auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=...	[more]

BLAST of Cp4.1LG05g02880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28085.1	5.6e-23	50.00	SAUR-like auxin-responsive protein family	[more]
AT3G09870.1	5.5e-18	55.00	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	5.9e-12	42.53	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	6.5e-11	41.38	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	1.1e-10	43.28	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 39..118 e-value: 1.2E-20 score: 73.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..54
None	No IPR available	PANTHER	PTHR31374:SF334	AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE	coord: 21..129
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 21..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g02880.1	Cp4.1LG05g02880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin