Homology
BLAST of Cp4.1LG05g02750 vs. ExPASy Swiss-Prot
Match:
Q8VXZ9 (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1)
HSP 1 Score: 488.8 bits (1257), Expect = 5.5e-137
Identity = 260/421 (61.76%), Postives = 300/421 (71.26%), Query Frame = 0
Query: 7 QPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYGFV 66
Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11 QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70
Query: 67 EFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
EF+SHAAAER LQTYNG+QMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71 EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130
Query: 127 YLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
YLLQETFRV Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190
Query: 187 ISAATPKKTIGVQQQYSLGKAMYPV---PAYTTPVP--VLPADYDANNTTIFVGNLDPNI 246
ISAATPKK +GVQQQY + KA+YPV A PV V P + D TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQY-VTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250
Query: 247 TEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGR 306
TEEELK+ F Q GE++Y KIPA KG G+VQF TRPSAEEA+Q+MQG+VIGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310
Query: 307 NPA-----------------------------------------------IKQVDGVQDL 366
NP +Q +G QD+
Sbjct: 311 NPGQDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGYGYPQYPQQGEGTQDI 370
Query: 367 A-AVAGAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLTTSSLVK 375
+ + AG V EQ E D L TPDV+ LN AYLS H SAILG P+W TSSL
Sbjct: 371 SNSAAGGVAGAEQ--ELYDPLATPDVD-----KLNAAYLSVHASAILGRPMWQRTSSLTS 422
BLAST of Cp4.1LG05g02750 vs. ExPASy Swiss-Prot
Match:
Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)
HSP 1 Score: 382.9 bits (982), Expect = 4.2e-105
Identity = 195/311 (62.70%), Postives = 228/311 (73.31%), Query Frame = 0
Query: 3 AMAGQPAHHQPT-TVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPE 62
AMA + PT EVR+LWIGDLQYW+DE+YL++CF HTGE++S K+IRNK TGQ E
Sbjct: 66 AMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSE 125
Query: 63 GYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLA 122
GYGF+EF SHAAAE ILQTYNG+ MP EQ FR+NWAS G GERR D+ EH+IFVGDLA
Sbjct: 126 GYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA-EHTIFVGDLA 185
Query: 123 PDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCS 182
DVTDY+LQETF+ Y SVRGAKVVTD TGRSKGYGFVKFADE+E+ RAM+EMNGV CS
Sbjct: 186 ADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCS 245
Query: 183 TRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNI 242
TRPMRI A KK +G Q KA Y P T + D NNTTIFVG LDP +
Sbjct: 246 TRPMRIGPAANKKPVGTPQ-----KATYQNPQAT------QGESDPNNTTIFVGGLDPTV 305
Query: 243 TEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGR 302
EE L+Q F +GE+V+ KI AGK CGFVQFGTR SAE+A+ + G +G Q +R SWGR
Sbjct: 306 AEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGR 364
Query: 303 NPAIKQVDGVQ 313
+P+ KQ D Q
Sbjct: 366 SPSSKQTDQTQ 364
BLAST of Cp4.1LG05g02750 vs. ExPASy Swiss-Prot
Match:
Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)
HSP 1 Score: 378.6 bits (971), Expect = 8.0e-104
Identity = 187/309 (60.52%), Postives = 233/309 (75.40%), Query Frame = 0
Query: 7 QPAHHQPTTV----EEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEG 66
Q PT + E+ +T+WIGDLQ W+DESYL+SCF+ GEV+S+KIIRNK TGQ E
Sbjct: 67 QKMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSER 126
Query: 67 YGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAP 126
YGFVEF +HAAAE++LQ+YNG+ MP TEQ FRLNWA F GE+R + G + SIFVGDLA
Sbjct: 127 YGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLAS 186
Query: 127 DVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCST 186
DVTD +L++TF +YPS++GAKVV D NTG SKGYGFV+F DE+ER+RAM+EMNGVYCS+
Sbjct: 187 DVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSS 246
Query: 187 RPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVL---PADYDANNTTIFVGNLDP 246
R MRI ATPKK +QYS +A+ Y + +D D++NTTIFVG LD
Sbjct: 247 RAMRIGVATPKKP-SAHEQYS-SQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDS 306
Query: 247 NITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSW 306
+T+EEL+Q+F QFGE+V KIPAGKGCGFVQF R SA+EAIQK+ G +IG+Q VR SW
Sbjct: 307 EVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSW 366
Query: 307 GRNPAIKQV 309
GR+PA KQ+
Sbjct: 367 GRSPANKQM 373
BLAST of Cp4.1LG05g02750 vs. ExPASy Swiss-Prot
Match:
Q0WW84 (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1)
HSP 1 Score: 365.2 bits (936), Expect = 9.1e-100
Identity = 172/291 (59.11%), Postives = 224/291 (76.98%), Query Frame = 0
Query: 17 EEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYGFVEFVSHAAAER 76
++V+TLW+GDL +W+DE+YL+SCF+HTGEV S+K+IRNK+T Q EGYGFVEF+S AAAE
Sbjct: 105 DDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEE 164
Query: 77 ILQTYNGSQMPGTEQTFRLNWASFGIGERRP-DAGPEHSIFVGDLAPDVTDYLLQETFRV 136
+LQ Y+GS MP ++Q FR+NWASF GE+R + GP+ S+FVGDL+PDVTD LL ETF
Sbjct: 165 VLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSD 224
Query: 137 QYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKT 196
+YPSV+ AKVV D NTGRSKGYGFV+F DENER+RA++EMNG YCS R MR+ ATPK+
Sbjct: 225 RYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRA 284
Query: 197 IGVQQQYSLGKAMYPVPAYTTPVPV---LPADYDANNTTIFVGNLDPNITEEELKQTFLQ 256
I QQQ+S +A+ + + + +D ++ N TIFVG +DP++ +E+L+Q F Q
Sbjct: 285 IANQQQHS-SQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQ 344
Query: 257 FGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNP 304
FGE+V KIP GKGCGFVQF R SAE+AI+ + G VIG+ VR SWGR+P
Sbjct: 345 FGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP 394
BLAST of Cp4.1LG05g02750 vs. ExPASy Swiss-Prot
Match:
Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)
HSP 1 Score: 362.5 bits (929), Expect = 5.9e-99
Identity = 176/304 (57.89%), Postives = 223/304 (73.36%), Query Frame = 0
Query: 5 AGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYG 64
A P QPTT +E+RTLWIGDLQYW+DE++L CFAHTGE++S K+IRNK TGQ EGYG
Sbjct: 47 AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106
Query: 65 FVEFVSHAAAERILQTYNGSQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
F+EF SHAAAER+LQT+N + +P +Q FRLNWAS G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166
Query: 125 VTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
VTDY+L ETFR YPSV+GAKVV D TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226
Query: 185 PMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITE 244
PMRI A KK + Q+ +Y + + D D NNTT+FVG LD ++T+
Sbjct: 227 PMRIGPAASKKGVTGQRD-----------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 286
Query: 245 EELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNP 304
+ LK F Q+GEIV+ KIPAGK CGFVQF + AEEA++ + G +G VR SWGR+P
Sbjct: 287 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 338
Query: 305 AIKQ 308
+ KQ
Sbjct: 347 SNKQ 338
BLAST of Cp4.1LG05g02750 vs. NCBI nr
Match:
XP_023533305.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 723 bits (1865), Expect = 1.51e-261
Identity = 369/428 (86.21%), Postives = 369/428 (86.21%), Query Frame = 0
Query: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
Query: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
Query: 301 RNPAIKQ----------------------------------------------------- 360
RNPAIKQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQP 360
Query: 361 VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLT 375
VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVE LNYAYLSKHESAILGWPLWLT
Sbjct: 361 VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVEF-----LNYAYLSKHESAILGWPLWLT 420
BLAST of Cp4.1LG05g02750 vs. NCBI nr
Match:
XP_022958490.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 719 bits (1856), Expect = 3.56e-260
Identity = 366/428 (85.51%), Postives = 369/428 (86.21%), Query Frame = 0
Query: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
Query: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
STRPMRISAATPKKTIGVQQQY+LGKAMYPVP+YTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
Query: 301 RNPAIKQ----------------------------------------------------- 360
RNPAIKQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
Query: 361 VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLT 375
VDGVQDLAAVAGAVPAVEQ+EEWNDTLDTPDVE LNYAYLSKHESAILGWPLWLT
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEF-----LNYAYLSKHESAILGWPLWLT 420
BLAST of Cp4.1LG05g02750 vs. NCBI nr
Match:
KAG6606177.1 (Polyadenylate-binding protein RBP47B', partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 719 bits (1855), Expect = 5.05e-260
Identity = 366/428 (85.51%), Postives = 368/428 (85.98%), Query Frame = 0
Query: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
Query: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
STRPMRISAATPKKTIGVQQQYSLGKAMYPVP+YTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
Query: 301 RNPAIKQ----------------------------------------------------- 360
RNPAIKQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVAQDPSLYAYGAYSGYTSYPQP 360
Query: 361 VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLT 375
DGVQDLAAVAGAVPAVEQ+EEWNDTLDTPDVE LNYAYLSKHESAILGWPLWLT
Sbjct: 361 ADGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEF-----LNYAYLSKHESAILGWPLWLT 420
BLAST of Cp4.1LG05g02750 vs. NCBI nr
Match:
XP_023533306.1 (polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 713 bits (1841), Expect = 6.37e-258
Identity = 367/428 (85.75%), Postives = 367/428 (85.75%), Query Frame = 0
Query: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
Query: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
STRPMRISAATPKKTIGVQQQYSL AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSL--AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
Query: 301 RNPAIKQ----------------------------------------------------- 360
RNPAIKQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQP 360
Query: 361 VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLT 375
VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVE LNYAYLSKHESAILGWPLWLT
Sbjct: 361 VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVEF-----LNYAYLSKHESAILGWPLWLT 420
BLAST of Cp4.1LG05g02750 vs. NCBI nr
Match:
XP_022958491.1 (polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita moschata])
HSP 1 Score: 710 bits (1832), Expect = 1.50e-256
Identity = 364/428 (85.05%), Postives = 367/428 (85.75%), Query Frame = 0
Query: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
Query: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
STRPMRISAATPKKTIGVQQQY+L AMYPVP+YTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTL--AMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
Query: 301 RNPAIKQ----------------------------------------------------- 360
RNPAIKQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
Query: 361 VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLT 375
VDGVQDLAAVAGAVPAVEQ+EEWNDTLDTPDVE LNYAYLSKHESAILGWPLWLT
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEF-----LNYAYLSKHESAILGWPLWLT 420
BLAST of Cp4.1LG05g02750 vs. ExPASy TrEMBL
Match:
A0A6J1H3K6 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459701 PE=4 SV=1)
HSP 1 Score: 719 bits (1856), Expect = 1.72e-260
Identity = 366/428 (85.51%), Postives = 369/428 (86.21%), Query Frame = 0
Query: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
Query: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
STRPMRISAATPKKTIGVQQQY+LGKAMYPVP+YTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTLGKAMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
Query: 301 RNPAIKQ----------------------------------------------------- 360
RNPAIKQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
Query: 361 VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLT 375
VDGVQDLAAVAGAVPAVEQ+EEWNDTLDTPDVE LNYAYLSKHESAILGWPLWLT
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEF-----LNYAYLSKHESAILGWPLWLT 420
BLAST of Cp4.1LG05g02750 vs. ExPASy TrEMBL
Match:
A0A6J1H274 (polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459701 PE=4 SV=1)
HSP 1 Score: 710 bits (1832), Expect = 7.25e-257
Identity = 364/428 (85.05%), Postives = 367/428 (85.75%), Query Frame = 0
Query: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
Query: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
STRPMRISAATPKKTIGVQQQY+L AMYPVP+YTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTL--AMYPVPSYTTPVPVLPADYDANNTTIFVGNLDPN 240
Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
Query: 301 RNPAIKQ----------------------------------------------------- 360
RNPAIKQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
Query: 361 VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLT 375
VDGVQDLAAVAGAVPAVEQ+EEWNDTLDTPDVE LNYAYLSKHESAILGWPLWLT
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEF-----LNYAYLSKHESAILGWPLWLT 420
BLAST of Cp4.1LG05g02750 vs. ExPASy TrEMBL
Match:
A0A6J1K6N6 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491635 PE=4 SV=1)
HSP 1 Score: 707 bits (1825), Expect = 9.10e-256
Identity = 362/428 (84.58%), Postives = 366/428 (85.51%), Query Frame = 0
Query: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
Query: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
APDVTDYLLQETFRVQYPSVRGAKVVTD NTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDSNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
STRPMRISAATPKKTIGVQQQYSLGKAMYPVP YT+PVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPTYTSPVPVLPADYDANNTTIFVGNLDPN 240
Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFG+RPSAEEAIQKMQGKVIGQQVVRTS G
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGSRPSAEEAIQKMQGKVIGQQVVRTSLG 300
Query: 301 RNPAIKQ----------------------------------------------------- 360
RNPAIKQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
Query: 361 VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLT 375
VDGVQDLAAVAGAVPAVEQ+EEWNDTLDTPDVE LNYAYLSKHESAILGWPLWLT
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEF-----LNYAYLSKHESAILGWPLWLT 420
BLAST of Cp4.1LG05g02750 vs. ExPASy TrEMBL
Match:
A0A6J1K1T3 (polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491635 PE=4 SV=1)
HSP 1 Score: 698 bits (1801), Expect = 3.83e-252
Identity = 360/428 (84.11%), Postives = 364/428 (85.05%), Query Frame = 0
Query: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP
Sbjct: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
Query: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
APDVTDYLLQETFRVQYPSVRGAKVVTD NTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDSNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
STRPMRISAATPKKTIGVQQQYSL AMYPVP YT+PVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSL--AMYPVPTYTSPVPVLPADYDANNTTIFVGNLDPN 240
Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFG+RPSAEEAIQKMQGKVIGQQVVRTS G
Sbjct: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGSRPSAEEAIQKMQGKVIGQQVVRTSLG 300
Query: 301 RNPAIKQ----------------------------------------------------- 360
RNPAIKQ
Sbjct: 301 RNPAIKQDLATWGQQVDPNQWSAYYGGYGGAYDAYGYGVVQDPSLYAYGAYSGYTSYPQQ 360
Query: 361 VDGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLT 375
VDGVQDLAAVAGAVPAVEQ+EEWNDTLDTPDVE LNYAYLSKHESAILGWPLWLT
Sbjct: 361 VDGVQDLAAVAGAVPAVEQAEEWNDTLDTPDVEF-----LNYAYLSKHESAILGWPLWLT 420
BLAST of Cp4.1LG05g02750 vs. ExPASy TrEMBL
Match:
A0A1S3ATQ6 (polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)
HSP 1 Score: 692 bits (1786), Expect = 7.66e-250
Identity = 351/427 (82.20%), Postives = 358/427 (83.84%), Query Frame = 0
Query: 1 MAAMAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQP 60
MA +AGQP HHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1 MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60
Query: 61 EGYGFVEFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
EGYGFVEFVSHAAAERILQTYNG+QMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61 EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
Query: 121 APDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
APDVTDYLLQETFR QYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTT VPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240
Query: 241 ITEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWG 300
ITEEELKQTFLQFGEI Y KIPAGKGCGFVQFGTR SAEEAIQKMQGK+IGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
Query: 301 RNPAIKQ----------------------------------------------------V 360
RNPA KQ V
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
Query: 361 DGVQDLAAVAGAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLTT 375
DGVQDLA VAGAVP+VEQ EEWNDTLDTPDV+ LN AYLSKHESAILGWPLWLTT
Sbjct: 361 DGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDY-----LNDAYLSKHESAILGWPLWLTT 420
BLAST of Cp4.1LG05g02750 vs. TAIR 10
Match:
AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 488.8 bits (1257), Expect = 3.9e-138
Identity = 260/421 (61.76%), Postives = 300/421 (71.26%), Query Frame = 0
Query: 7 QPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYGFV 66
Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11 QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70
Query: 67 EFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
EF+SHAAAER LQTYNG+QMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71 EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130
Query: 127 YLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
YLLQETFRV Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190
Query: 187 ISAATPKKTIGVQQQYSLGKAMYPV---PAYTTPVP--VLPADYDANNTTIFVGNLDPNI 246
ISAATPKK +GVQQQY + KA+YPV A PV V P + D TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQY-VTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250
Query: 247 TEEELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGR 306
TEEELK+ F Q GE++Y KIPA KG G+VQF TRPSAEEA+Q+MQG+VIGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310
Query: 307 NPA-----------------------------------------------IKQVDGVQDL 366
NP +Q +G QD+
Sbjct: 311 NPGQDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGYGYPQYPQQGEGTQDI 370
Query: 367 A-AVAGAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLTTSSLVK 375
+ + AG V EQ E D L TPDV+ LN AYLS H SAILG P+W TSSL
Sbjct: 371 SNSAAGGVAGAEQ--ELYDPLATPDVD-----KLNAAYLSVHASAILGRPMWQRTSSLTS 422
BLAST of Cp4.1LG05g02750 vs. TAIR 10
Match:
AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 483.0 bits (1242), Expect = 2.1e-136
Identity = 253/416 (60.82%), Postives = 292/416 (70.19%), Query Frame = 0
Query: 7 QPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYGFV 66
Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11 QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70
Query: 67 EFVSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
EF+SHAAAER LQTYNG+QMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71 EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130
Query: 127 YLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
YLLQETFRV Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190
Query: 187 ISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEEL 246
ISAATPKK +GVQQQY + A V P + D TTI V NLD N+TEEEL
Sbjct: 191 ISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEEL 250
Query: 247 KQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNPA-- 306
K+ F Q GE++Y KIPA KG G+VQF TRPSAEEA+Q+MQG+VIGQQ VR SW +NP
Sbjct: 251 KKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQD 310
Query: 307 ---------------------------------------------IKQVDGVQDLA-AVA 366
+Q +G QD++ + A
Sbjct: 311 GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGYGYPQYPQQGEGTQDISNSAA 370
Query: 367 GAVPAVEQSEEWNDTLDTPDVELSLIGSLNYAYLSKHESAILGWPLWLTTSSLVKQ 375
G V EQ E D L TPDV+ LN AYLS H SAILG P+W TSSL Q
Sbjct: 371 GGVAGAEQ--ELYDPLATPDVD-----KLNAAYLSVHASAILGRPMWQRTSSLTSQ 418
BLAST of Cp4.1LG05g02750 vs. TAIR 10
Match:
AT3G19130.1 (RNA-binding protein 47B )
HSP 1 Score: 365.2 bits (936), Expect = 6.5e-101
Identity = 172/291 (59.11%), Postives = 224/291 (76.98%), Query Frame = 0
Query: 17 EEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYGFVEFVSHAAAER 76
++V+TLW+GDL +W+DE+YL+SCF+HTGEV S+K+IRNK+T Q EGYGFVEF+S AAAE
Sbjct: 105 DDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEE 164
Query: 77 ILQTYNGSQMPGTEQTFRLNWASFGIGERRP-DAGPEHSIFVGDLAPDVTDYLLQETFRV 136
+LQ Y+GS MP ++Q FR+NWASF GE+R + GP+ S+FVGDL+PDVTD LL ETF
Sbjct: 165 VLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSD 224
Query: 137 QYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKT 196
+YPSV+ AKVV D NTGRSKGYGFV+F DENER+RA++EMNG YCS R MR+ ATPK+
Sbjct: 225 RYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRA 284
Query: 197 IGVQQQYSLGKAMYPVPAYTTPVPV---LPADYDANNTTIFVGNLDPNITEEELKQTFLQ 256
I QQQ+S +A+ + + + +D ++ N TIFVG +DP++ +E+L+Q F Q
Sbjct: 285 IANQQQHS-SQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQ 344
Query: 257 FGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNP 304
FGE+V KIP GKGCGFVQF R SAE+AI+ + G VIG+ VR SWGR+P
Sbjct: 345 FGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP 394
BLAST of Cp4.1LG05g02750 vs. TAIR 10
Match:
AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 362.5 bits (929), Expect = 4.2e-100
Identity = 176/304 (57.89%), Postives = 223/304 (73.36%), Query Frame = 0
Query: 5 AGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVMSIKIIRNKITGQPEGYG 64
A P QPTT +E+RTLWIGDLQYW+DE++L CFAHTGE++S K+IRNK TGQ EGYG
Sbjct: 47 AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106
Query: 65 FVEFVSHAAAERILQTYNGSQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
F+EF SHAAAER+LQT+N + +P +Q FRLNWAS G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166
Query: 125 VTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
VTDY+L ETFR YPSV+GAKVV D TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226
Query: 185 PMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITE 244
PMRI A KK + Q+ +Y + + D D NNTT+FVG LD ++T+
Sbjct: 227 PMRIGPAASKKGVTGQRD-----------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 286
Query: 245 EELKQTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNP 304
+ LK F Q+GEIV+ KIPAGK CGFVQF + AEEA++ + G +G VR SWGR+P
Sbjct: 287 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 338
Query: 305 AIKQ 308
+ KQ
Sbjct: 347 SNKQ 338
BLAST of Cp4.1LG05g02750 vs. TAIR 10
Match:
AT1G47500.1 (RNA-binding protein 47C' )
HSP 1 Score: 361.7 bits (927), Expect = 7.2e-100
Identity = 182/300 (60.67%), Postives = 221/300 (73.67%), Query Frame = 0
Query: 11 HQPTTVEEVRTLWIGDLQYWVDESYLNSCF--AHTGEVMSIKIIRNKITGQPEGYGFVEF 70
HQ E +T+W+GDLQ W+DE+YLNS F A E++S+K+IRNK G EGYGFVEF
Sbjct: 94 HQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEF 153
Query: 71 VSHAAAERILQTYNGSQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDY 130
SH A+++LQ +NG+ MP T+Q FRLNWASF GE+R + GP+ SIFVGDLAPDV+D
Sbjct: 154 ESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDA 213
Query: 131 LLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRI 190
LL ETF +YPSV+ AKVV D NTGRSKGYGFV+F DENER +AM+EMNGV CS+R MRI
Sbjct: 214 LLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRI 273
Query: 191 SAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEELK 250
ATP+KT G QQQ P A+T ++ D NTTIFVG LD ++T+E+LK
Sbjct: 274 GPATPRKTNGYQQQ----GGYMPSGAFTR------SEGDTINTTIFVGGLDSSVTDEDLK 333
Query: 251 QTFLQFGEIVYAKIPAGKGCGFVQFGTRPSAEEAIQKMQGKVIGQQVVRTSWGRNPAIKQ 308
Q F +FGEIV KIP GKGCGFVQF RP+AEEA++K+ G VIG+Q VR SWGRNPA KQ
Sbjct: 334 QPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQ 383
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8VXZ9 | 5.5e-137 | 61.76 | Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B'... | [more] |
Q9LEB4 | 4.2e-105 | 62.70 | Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4... | [more] |
Q9LEB3 | 8.0e-104 | 60.52 | Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4... | [more] |
Q0WW84 | 9.1e-100 | 59.11 | Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P... | [more] |
Q9SAB3 | 5.9e-99 | 57.89 | Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P... | [more] |
Match Name | E-value | Identity | Description | |
XP_023533305.1 | 1.51e-261 | 86.21 | polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita pepo subsp. pep... | [more] |
XP_022958490.1 | 3.56e-260 | 85.51 | polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata] | [more] |
KAG6606177.1 | 5.05e-260 | 85.51 | Polyadenylate-binding protein RBP47B', partial [Cucurbita argyrosperma subsp. so... | [more] |
XP_023533306.1 | 6.37e-258 | 85.75 | polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita pepo subsp. pep... | [more] |
XP_022958491.1 | 1.50e-256 | 85.05 | polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1H3K6 | 1.72e-260 | 85.51 | polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1H274 | 7.25e-257 | 85.05 | polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1K6N6 | 9.10e-256 | 84.58 | polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1K1T3 | 3.83e-252 | 84.11 | polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita maxima OX=366... | [more] |
A0A1S3ATQ6 | 7.66e-250 | 82.20 | polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC1... | [more] |