Cp4.1LG05g02720 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g02720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Dimethylallyl, adenosine tRNA methylthiotransferase
Location	Cp4.1LG05: 1499145 .. 1500592 (-)
RNA-Seq Expression	Cp4.1LG05g02720
Synteny	Cp4.1LG05g02720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTATGTTTAGGTTGGCGGCAGAACCATTAAAAACGAACGGTTGTCTTTTTACGTTTTGGACGGTTAAGATTTCCCGCCACAGGGAGCTTCATTCGCATACGGATAACGCTGGTGCAGAGTACTGCAGAGTACTACAGAGTGAGACGAGGACCCAAGAACCAGTGGCTGAGAATTGTAATCTTTTCATTTTCACTATTTCACAGAGACCATCAATGGCCGCTCTTAGGTTCGGCTTCACCGCCACCACCATCCACGTTTCATCAACGTCGATTCTCACCCGCACTCGCCCCAACCCAAAGACCATTACCTGCGTCGGATGGGTATCTTTCTAATCTTTCCCTCTTCTTCTTACACTTCCATTTTTCCTTTCCTTATCAGAGATTCGTTCGATTCAGGACCCAGAAGGCATTTTTGGACCGCCTCAGACCGGCCATATCGCTCGAAGAGAGTTCACAAGGCGGCTGGAGAGGGATGCCGAAGCTCGCGAGGCTTTCGAACGCGAAGTCCGGGAAGAGAAAGAACGCCGCCAATTGCTTCGAGCGGTACTTCTAGCAATTGGGGTTTTTCAATTTCATGACTTTTTTCCAATTGGGTTTGTGTTTGTTTCCAAATTTGGAGTGTTGGTCAGTCAAAATTTACTGATTGTTGTATTCATCTCTGTTCATGGATAGTCTCGTGTAGTTCCGAACAACGTGACTGGCCTTATTGAGTATTTTCTTGATACTGAAGCTCAGGATATTGAATTTGAAATCGCCAGGTTAAGGCCCAGGTTAGTGATTGAAACAGGATTCTGATTTTTCCAGTTCTGTTAGCTCAATCAGCTCTGATATCAACATTGTCTGATCATGGCAGGCTGACCGAGGAGTTTTTTTCGAGTATAAAACTTGAGTTGGGAGAGCTTAGATTTGCCGTTAACAAAACTGAGGTCAATTCTTGTCATGTTTTAAAATTTCCTTAGATGAAGATTGATGCCATCACGATAACAACTAAACAAGCAATTCCCTTGATTGTTTAGGCCATGGAAGACAGAGTGATTGAGTTAGAAGCATTACAGAAAGCGCTTGAAGAAGGAATAGGTCTGTCTGAAACCTCAATTCCTCTTTCCCTGGGCTGCTTCATTTGATAACATACTTCATTTAGTTTTGTGTTACAGAAGCGTATGATAAAATGCAAGGCGAACTGGTAAAAGCAAGGGAAGGCTTAACCAAAATTTTAACATCAAAGGATGTAAAAGCTACCGTATGTGTTCTGTTTCTTCTTTCACTCTGCTGTTTATACCTGACTCTGCAACCAAAATGCTGACCATGTCGCTTCTATTCTGTAGTTGTTGGATATGGTGGAACGAAACGAGCTCAATCGATCGCTACTAGCCCTTCTCGACGAAAACATAGCCAATGCGCAAAGCGGTAACCAGGTAATAGCCATTGATGAATTTCTTCTTTCA

mRNA sequence

ATGGTTATGTTGGCGGCAGAACCATTAAAAACGAACGGTTGTCTTTTTACGTTTTGGACGGTTAAGATTTCCCGCCACAGGGAGCTTCATTCGCATACGGATAACGCTGGTGCAGAGTACTGCAGAGTACTACAGAGTGAGACGAGGACCCAAGAACCAGTGGCTGAGAATTGTAATCTTTTCATTTTCACTATTTCACAGAGACCATCAATGGCCGCTCTTAGGTTCGGCTTCACCGCCACCACCATCCACGTTTCATCAACGTCGATTCTCACCCGCACTCGCCCCAACCCAAAGACCATTACCTGCGTCGGATGGGACCCAGAAGGCATTTTTGGACCGCCTCAGACCGGCCATATCGCTCGAAGAGAGTTCACAAGGCGGCTGGAGAGGGATGCCGAAGCTCGCGAGGCTTTCGAACGCGAAGTCCGGGAAGAGAAAGAACGCCGCCAATTGCTTCGAGCGTCTCGTGTAGTTCCGAACAACGTGACTGGCCTTATTGAGTATTTTCTTGATACTGAAGCTCAGGATATTGAATTTGAAATCGCCAGGTTAAGGCCCAGGCTGACCGAGGAGTTTTTTTCGAGTATAAAACTTGAGTTGGGAGAGCTTAGATTTGCCGTTAACAAAACTGAGGCCATGGAAGACAGAGTGATTGAGTTAGAAGCATTACAGAAAGCGCTTGAAGAAGGAATAGAAGCGTATGATAAAATGCAAGGCGAACTGGTAAAAGCAAGGGAAGGCTTAACCAAAATTTTAACATCAAAGGATGTAAAAGCTACCTTGTTGGATATGGTGGAACGAAACGAGCTCAATCGATCGCTACTAGCCCTTCTCGACGAAAACATAGCCAATGCGCAAAGCGGTAACCAGGTAATAGCCATTGATGAATTTCTTCTTTCA

Coding sequence (CDS)

ATGGTTATGTTGGCGGCAGAACCATTAAAAACGAACGGTTGTCTTTTTACGTTTTGGACGGTTAAGATTTCCCGCCACAGGGAGCTTCATTCGCATACGGATAACGCTGGTGCAGAGTACTGCAGAGTACTACAGAGTGAGACGAGGACCCAAGAACCAGTGGCTGAGAATTGTAATCTTTTCATTTTCACTATTTCACAGAGACCATCAATGGCCGCTCTTAGGTTCGGCTTCACCGCCACCACCATCCACGTTTCATCAACGTCGATTCTCACCCGCACTCGCCCCAACCCAAAGACCATTACCTGCGTCGGATGGGACCCAGAAGGCATTTTTGGACCGCCTCAGACCGGCCATATCGCTCGAAGAGAGTTCACAAGGCGGCTGGAGAGGGATGCCGAAGCTCGCGAGGCTTTCGAACGCGAAGTCCGGGAAGAGAAAGAACGCCGCCAATTGCTTCGAGCGTCTCGTGTAGTTCCGAACAACGTGACTGGCCTTATTGAGTATTTTCTTGATACTGAAGCTCAGGATATTGAATTTGAAATCGCCAGGTTAAGGCCCAGGCTGACCGAGGAGTTTTTTTCGAGTATAAAACTTGAGTTGGGAGAGCTTAGATTTGCCGTTAACAAAACTGAGGCCATGGAAGACAGAGTGATTGAGTTAGAAGCATTACAGAAAGCGCTTGAAGAAGGAATAGAAGCGTATGATAAAATGCAAGGCGAACTGGTAAAAGCAAGGGAAGGCTTAACCAAAATTTTAACATCAAAGGATGTAAAAGCTACCTTGTTGGATATGGTGGAACGAAACGAGCTCAATCGATCGCTACTAGCCCTTCTCGACGAAAACATAGCCAATGCGCAAAGCGGTAACCAGGTAATAGCCATTGATGAATTTCTTCTTTCA

Protein sequence

MVMLAAEPLKTNGCLFTFWTVKISRHRELHSHTDNAGAEYCRVLQSETRTQEPVAENCNLFIFTISQRPSMAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLERDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQVIAIDEFLLS

Homology

[Close]

BLAST of Cp4.1LG05g02720 vs. NCBI nr
Match: XP_023532969.1 (uncharacterized protein LOC111794981 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 556 bits (1434), Expect = 6.34e-199
Identity = 289/291 (99.31%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   MVMLAAEPLKTNGCLFTFWTVKISRHRELHSHTDNAGAEYCRVLQSETRTQEPVAENCNL 60
           M  LAAEPLKTNGCLFTFWTVKISRHRELHSHTDNAGAEYCRVLQSETRTQEPVAENCNL
Sbjct: 3   MFRLAAEPLKTNGCLFTFWTVKISRHRELHSHTDNAGAEYCRVLQSETRTQEPVAENCNL 62

Query: 61  FIFTISQRPSMAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHI 120
           FIFTISQRPSMAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHI
Sbjct: 63  FIFTISQRPSMAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHI 122

Query: 121 ARREFTRRLERDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEF 180
           ARREFTRRLERDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEF
Sbjct: 123 ARREFTRRLERDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEF 182

Query: 181 EIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQG 240
           EIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQG
Sbjct: 183 EIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQG 242

Query: 241 ELVKAREGLTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 291
           ELVKAREGLTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ
Sbjct: 243 ELVKAREGLTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 293

[Close]

BLAST of Cp4.1LG05g02720 vs. NCBI nr
Match: XP_022958721.1 (uncharacterized protein LOC111459862 [Cucurbita moschata] >KAG6606162.1 hypothetical protein SDJN03_03479, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036106.1 hypothetical protein SDJN02_02906, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 413 bits (1062), Expect = 2.13e-143
Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREF RRLE
Sbjct: 1   MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           RDAEAREAFER+VREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT
Sbjct: 61  RDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT
Sbjct: 121 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 291
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 221

[Close]

BLAST of Cp4.1LG05g02720 vs. NCBI nr
Match: XP_022996178.1 (uncharacterized protein LOC111491485 [Cucurbita maxima])

HSP 1 Score: 406 bits (1044), Expect = 1.17e-140
Identity = 216/221 (97.74%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAALRFGFTATTIHVSSTSILTRTRP PKTITCVGWDPEGIFGPPQTGHIAR+EF RRLE
Sbjct: 1   MAALRFGFTATTIHVSSTSILTRTRPIPKTITCVGWDPEGIFGPPQTGHIARKEFKRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           RDAEAREAFE +VREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT
Sbjct: 61  RDAEAREAFESQVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT
Sbjct: 121 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 291
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 221

[Close]

BLAST of Cp4.1LG05g02720 vs. NCBI nr
Match: XP_038874696.1 (uncharacterized protein LOC120067243 [Benincasa hispida])

HSP 1 Score: 378 bits (970), Expect = 2.07e-129
Identity = 198/221 (89.59%), Postives = 209/221 (94.57%), Query Frame = 0


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAAL FGFTATTIH  S+SILTR+RP+P+TITC+GWDPEG+FG PQTGHIAR EF RRLE
Sbjct: 1   MAALSFGFTATTIHPPSSSILTRSRPSPQTITCIGWDPEGLFGRPQTGHIARNEFKRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           +DAEAREAFER VREEKERR+ LR SRV+P+NVTGLIEYFLDTEAQDIEFEIARLRPRL 
Sbjct: 61  KDAEAREAFERHVREEKERRKALRESRVIPDNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT
Sbjct: 121 EEFFSHVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 291
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQ GNQ
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQ 221

[Close]

BLAST of Cp4.1LG05g02720 vs. NCBI nr
Match: XP_008437135.1 (PREDICTED: uncharacterized protein LOC103482648 [Cucumis melo])

HSP 1 Score: 368 bits (945), Expect = 1.22e-125
Identity = 196/221 (88.69%), Postives = 206/221 (93.21%), Query Frame = 0


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAAL FGFTATTIH+ STSI  R+RP P+TITC+GWDPEG+FG PQTGHIAR EF RRLE
Sbjct: 1   MAALSFGFTATTIHLPSTSI--RSRPIPQTITCIGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           +DAEAREAFER VREEKERR+ LR SRV+P+NVTGLIEYFLDTEAQDIEFEIARLRPRL 
Sbjct: 61  KDAEAREAFERHVREEKERRKALRESRVIPDNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSHVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 291
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQ GNQ
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQ 219

[Close]

BLAST of Cp4.1LG05g02720 vs. ExPASy TrEMBL
Match: A0A6J1H2V9 (uncharacterized protein LOC111459862 OS=Cucurbita moschata OX=3662 GN=LOC111459862 PE=4 SV=1)

HSP 1 Score: 413 bits (1062), Expect = 1.03e-143
Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREF RRLE
Sbjct: 1   MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           RDAEAREAFER+VREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT
Sbjct: 61  RDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT
Sbjct: 121 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 291
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 221

[Close]

BLAST of Cp4.1LG05g02720 vs. ExPASy TrEMBL
Match: A0A6J1KA41 (uncharacterized protein LOC111491485 OS=Cucurbita maxima OX=3661 GN=LOC111491485 PE=4 SV=1)

HSP 1 Score: 406 bits (1044), Expect = 5.68e-141
Identity = 216/221 (97.74%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAALRFGFTATTIHVSSTSILTRTRP PKTITCVGWDPEGIFGPPQTGHIAR+EF RRLE
Sbjct: 1   MAALRFGFTATTIHVSSTSILTRTRPIPKTITCVGWDPEGIFGPPQTGHIARKEFKRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           RDAEAREAFE +VREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT
Sbjct: 61  RDAEAREAFESQVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT
Sbjct: 121 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 291
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 221

[Close]

BLAST of Cp4.1LG05g02720 vs. ExPASy TrEMBL
Match: A0A1S3AT96 (uncharacterized protein LOC103482648 OS=Cucumis melo OX=3656 GN=LOC103482648 PE=4 SV=1)

HSP 1 Score: 368 bits (945), Expect = 5.92e-126
Identity = 196/221 (88.69%), Postives = 206/221 (93.21%), Query Frame = 0


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAAL FGFTATTIH+ STSI  R+RP P+TITC+GWDPEG+FG PQTGHIAR EF RRLE
Sbjct: 1   MAALSFGFTATTIHLPSTSI--RSRPIPQTITCIGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           +DAEAREAFER VREEKERR+ LR SRV+P+NVTGLIEYFLDTEAQDIEFEIARLRPRL 
Sbjct: 61  KDAEAREAFERHVREEKERRKALRESRVIPDNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSHVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 291
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQ GNQ
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQ 219

[Close]

BLAST of Cp4.1LG05g02720 vs. ExPASy TrEMBL
Match: A0A5A7TDT6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00080 PE=4 SV=1)

HSP 1 Score: 367 bits (942), Expect = 1.69e-125
Identity = 196/221 (88.69%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAAL FGFTATTIH+ STSI  R+RP P+TITC+GWDPEG+FG PQTGHIAR EF RRLE
Sbjct: 1   MAALSFGFTATTIHLPSTSI--RSRPIPQTITCIGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           +DAEAREAFER VREEKERR+ LR SRV P+NVTGLIEYFLDTEAQDIEFEIARLRPRL 
Sbjct: 61  KDAEAREAFERHVREEKERRKALRESRVTPDNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSHVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 291
           KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQ GNQ
Sbjct: 181 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQMGNQ 219

[Close]

BLAST of Cp4.1LG05g02720 vs. ExPASy TrEMBL
Match: A0A0A0KKI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160130 PE=4 SV=1)

HSP 1 Score: 362 bits (928), Expect = 2.28e-123
Identity = 194/221 (87.78%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFTRRLE 130
           MAAL FGFT TTIH+ STSI  R+R  P+TITCVGWDPEG+FG PQTGHIAR EF RRLE
Sbjct: 1   MAALSFGFTPTTIHLPSTSI--RSRRIPQTITCVGWDPEGLFGKPQTGHIARNEFKRRLE 60

Query: 131 RDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPRLT 190
           +DAEAREAFER VREEKERR+ LR SRV+P NVTGLIEYFLDTEAQDIEFEIARLRPRL 
Sbjct: 61  KDAEAREAFERHVREEKERRKTLRESRVIPGNVTGLIEYFLDTEAQDIEFEIARLRPRLN 120

Query: 191 EEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLT 250
           EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLT
Sbjct: 121 EEFFSRVKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQRELVKAREGLT 180

Query: 251 KILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQ 291
           KILTSKDVKATLLDM+ERNELNRSLLALLDENIANAQ GNQ
Sbjct: 181 KILTSKDVKATLLDMLERNELNRSLLALLDENIANAQMGNQ 219

[Close]

BLAST of Cp4.1LG05g02720 vs. TAIR 10
Match: AT1G62780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 272.3 bits (695), Expect = 4.6e-73
Identity = 151/228 (66.23%), Postives = 180/228 (78.95%), Query Frame = 0


Query: 71  MAALRFGFTATTIHVSSTSILTRTRPNPK--TITCVGWDPEGIFGPPQTGHIARREFTRR 130
           MA L FG  A     ++T++ T  R N +   ITC  WDP+G+ GP QTGHIAR EF RR
Sbjct: 1   MATLSFGIAA-----AATTVRTIPRFNSRRSKITC-EWDPKGVLGPAQTGHIARLEFKRR 60

Query: 131 LERDAEAREAFEREVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEFEIARLRPR 190
           LERD+EAREAF++++REEKERRQ LR SRVVP+    LIEYFLDTEAQ+IE+EIARLR R
Sbjct: 61  LERDSEAREAFQKQLREEKERRQALRQSRVVPDTAAELIEYFLDTEAQEIEYEIARLRGR 120

Query: 191 LTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREG 250
           L +EFF+ I+LE+G++RFAV KT  +EDR+IELE LQKALEEGIEAYDKMQ EL+ A   
Sbjct: 121 LNDEFFAQIRLEIGQIRFAVTKTADIEDRLIELETLQKALEEGIEAYDKMQNELMTATNS 180

Query: 251 LTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGNQVIAID 297
           LTK+LTS D+K TLLDMVE+N++NRSLLALLDENIANA  GNQ  A D
Sbjct: 181 LTKLLTSTDIKTTLLDMVEKNQINRSLLALLDENIANAYKGNQKEAGD 222

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g02720 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG05g02720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532969.1	6.34e-199	99.31	uncharacterized protein LOC111794981 [Cucurbita pepo subsp. pepo]	[more]
XP_022958721.1	2.13e-143	99.10	uncharacterized protein LOC111459862 [Cucurbita moschata] >KAG6606162.1 hypothet...	[more]
XP_022996178.1	1.17e-140	97.74	uncharacterized protein LOC111491485 [Cucurbita maxima]	[more]
XP_038874696.1	2.07e-129	89.59	uncharacterized protein LOC120067243 [Benincasa hispida]	[more]
XP_008437135.1	1.22e-125	88.69	PREDICTED: uncharacterized protein LOC103482648 [Cucumis melo]	[more]

BLAST of Cp4.1LG05g02720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2V9	1.03e-143	99.10	uncharacterized protein LOC111459862 OS=Cucurbita moschata OX=3662 GN=LOC1114598...	[more]
A0A6J1KA41	5.68e-141	97.74	uncharacterized protein LOC111491485 OS=Cucurbita maxima OX=3661 GN=LOC111491485...	[more]
A0A1S3AT96	5.92e-126	88.69	uncharacterized protein LOC103482648 OS=Cucumis melo OX=3656 GN=LOC103482648 PE=...	[more]
A0A5A7TDT6	1.69e-125	88.69	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KKI9	2.28e-123	87.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160130 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g02720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62780.1	4.6e-73	66.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 221..241
None	No IPR available	COILS	Coil	Coil	coord: 122..156
None	No IPR available	PANTHER	PTHR36333	DIMETHYLALLYL, ADENOSINE TRNA METHYLTHIOTRANSFERASE	coord: 73..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g02720.1	Cp4.1LG05g02720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity