Cp4.1LG05g02490 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g02490
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DNA mismatch repair protein MutS
Location	Cp4.1LG05: 1460663 .. 1466692 (+)
RNA-Seq Expression	Cp4.1LG05g02490
Synteny	Cp4.1LG05g02490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGAACTGATGAGCAATGAACAACTGTTCTTTGGGCTCTCTCAAGCTCTCCGTAAATTTCCTAAAGAGACCGGTAAGCCTTTAGAAATCGTGAAGGCAAAAAGAAAATAAAATGTCAGTGTGAAATGAAAGATTCTTAGTTAAGTTCTTATACCTAATCATCTTTCCATGTTTTTAATTCAGATAGAGTACTTTGCCACTTCTGCTTCAAGCAAAAGAAAGTTACCAATGAAGTTTTGGGTGCTGATAATGCTAAAAAGAGCCAAAGTTTAATATCTAGCATTATTCTGCTGAAAACTTCTCTCGAGGCATTGCCTTTACTTTCAAAGGTAGTTTGCTTTTCAAATCTATACACGGTTTTCAAGAGTCCTGCACATATTTAAGATGGCTCCGTTCAAAATTTCAGGTGCTTAAAGAAGCAAAGAATTTTCTTCTTGCAAACATCTACAATTCTGTTTGTGAAAATGAAAAATTTGCAACCATTAGAAGGAGGTATACTTGGCTTCTGCTAATGACTGCGCAATTCTAATTTTTATGAATTTGGACTAGTAAGCCAACATTTCTCACAGATATCAATTTAATGCTGAACGACACTCGCATCTTTAACCGTAGCCCTCAATAAAGGGACTACATATTTATGTTATTTCAAAGAACCTCCTTTTTACAGGATTGGGGAGGTTATCGATGAGGATGTTCTTCATGCTAGGGTTCCTTTTATTGCCCGCACTCAGCAGTGTTTTGCGGTCAAGGCTGGAATTGATGGACTGCTTGATATCGCAAGAAGGACTTTCTGTGATACTAGTGAAGGTTATTCTCCTGCTAATCCATTGATTCGATAAGTTAAACATCTTTGTTATGTCTTATTATGTGAGTAGTGAAGGTTATTCTCCGGCTAATCCATTGATTCGATTAGTTAACATCTTTGTTATGTTTTATTATGTGAGTCGAATATGAGTTATGAAAAGTCACCCTCATGCCAGCAATACATAATCTTGCTAATAAATACCGAGAGGAGTACAAGCTGCCCAATTTAAAACTGCCATTTAACAATAGACAAGGGTTTTACTTGAGCATTCCTCGGAAAGATGTACAAGGCAAGCTTCCTAGCAAGTTTATTCAGGTGAAGCACGACACACTTGCTTTCTTGTCGATGTCTTTAAAATTATTTGAGTCTCACCTTCTTCTCACAAAATTCAGGTCTTGAAGCATGGGAACAATATACGATGCTCTACTCTGGAACTTGCTTCTGTGAGTATGTTTATTATAGTAGGGTTGTACCCATAGATCGATGATCAGATAACCTGCCTATAATAGGAGATAATTGTGCATTTATATTAGGTTTGAAGTTAATTGTATAATGTTGATGCGCTAAAATATAGGAAATTTTTCTTTTACTAGGGTAGTGTCGTACTCCCTTTATTCACAATTTTGCTTTCATAAATATTTTTTAATGCTAGTGGACCCACATCATTTTTAAAAGGATGTTGATGTGGCAAGCAATAAATGGAAGGAATATGCATACTCGTTTAGTACAGGAAACTTCCCCATAGAATGTCCTATTACCAACAAATAGTGGTCATACTATTCCTTTATTACATTTGGTTTACTTTGAATTACCACTAATGCAATTCAAAATTCATATGGTCTATAGTTGCTTTAAGTCTGTGAATTGCGCATGAGAAATTACAATGAAGGGCCTAATTTAATCTGCGAACTCGCTGTTTCTGTACCCTGATTGTACTCAATTGTTATGAGTGCTATCATTCTCACAATTATGATGTCTCAGAAATGATATAGCCTTAAGGAGTAGCTCATTGAACTATAATACTGAAGATTGCATGTCATCAAGATGGTGCATGGTTTGTAGTTTCACAAAATTCTTAAGCTTGGAGAAAATATTGTATACGATTTTACACACCTCCAGTTTCTTTTCTTCTGAAATTTGTGATTCACATTTTTGTGTGTAGCAAATTATGCTGTTGAATGCAGCAAATCCCATGCTTTTTTTATCCCATTTGCAGCTGAATGTTAGAAACAAGTCTGCAGCAGGAGAATGCTATATACGGACAGAAATTTGCCTGGAAGGTTATCTCACATGCTTAATTATTTAGTAAATCTTCACCCACGAGCTACCAATGATTAAGTTCACCTATATCTCTGAATTTTCCGTTTACCAAGGAATGATAATATTGTAAAAAAACATACGAATACTCTATCATATATAGGATAAAAGGCCTTATCCTCATAGAGCCTCCACCCTACTAATTAATTTATTCATTAACTTCCTTTGTTTTTTCTTGAAATCTCGCACTCTGTCTCGAGAAACAGAGAATATCTAAATTTTAACTGATTTCATCTCTTTCCCTTGGAAGGAGGTCCTAACGTCCCTCCACTCGGGGGGAAGGAAGAAAAACAATTTCCTAGTGCAAACTTGTTATGTTATATTTGATTTTGAAGTTTGTCAGTAATTAGTTTATATACAGGACTGGTAGATGCCATAAGAGAGGACGTCTCTATGCTCACACTGCTTGCAGAAGTCTTGTGTCTCTTAGATATGATGGTTAATTCTTTTGCACATACAATATCTTCGAAGCCTGTGGATAGATATACTAGGCCAAATTTTACAGGTAAGCCAACACTCTCCTGCCAAATTTTACAGGTATGCCAACAACAAACCTATGATTGATTTTCCTTGTTACAATAGAAAGTGGCCCGATGGCAATTGAAGCTGCGAGACACCCAATCCTAGAAAGTATACACAACGATTTTGTTGTACGTCTAAATTCATTGACAATTACTGATAGCTGTAATGTAGGATTATTTTAAATGGAGACAACTTTTCTAGTTTTTGATATCAGTTCTTTGAAGTTCAGTATTTGATGGAAATTTAAGTTTCTTCCATGCAGGCTAACAGTATATTTCTATCGGAAGCATCAAACATGATAATTGTCATGGGCCCAAATATGTAAGAACTCGCCTCATGACGTGATTTAAGATTTTCCTACATAAAAAATGTTATTCATCTTCATGTTTTATCTTTGAGTGGTCAACTTCTTTGAAATAATATCTATAAAAGATAAGAAGTTTAAACAATTGCTCAGAATGGGGAGCATTTATGAACTAAAGTTGTGCACANTTTAAGATTTTCCTGCATAAAAAATGTTATTCATCTTCATGTTTTATCTTTGAGTGGTCAACTTCTTTGAAATAATATCTATAAAAGATAAGAAGTTTAAACAATTGCTCAGAATGGGGAGCATTTATGAACTAAAGTTGTGCACAGTTTGAGGTGCTAAAAGCATACTCTTAACTAACCGGTACCGTCTTTTAAATTTCAGGCAAGATTAACTACACAAGTTCGTTTTTCTTTTTTAAAAAGTCATATCATAAATAGTCTTGGGAATATTCTAAAAGATCTAAACATTATCTTTTTGTTTCTNTAGTTTGAGGTGCTAAAAGCATACTCTTAACTAACCGGTACCGTCTTTTAAATTTCAGGCAAGATTAACTACACAAGTTCCTTTTTCTTTTTTAAAAAGTCATATCATAAATAGTGTTGGGAATATTCTAAAAGATCTAAACATTATCTTTTTGTTTCTGGTAAAACAAAAATATTATTTCCACAAAATGTGCATGGTAACATTACTTAATATATTCATTGATGATACTCTAGGAGAATGACCTGAATCTAGATAATGGTAAGAACAACTTGGATATCATTTCAATATCTCTGACACAGTTAAGCCAAGGAAACTGTATTTATTCCTTCCAGTTAAGATTCAGGCTGCAATTATACAACTTGAAGTTTTTAAATGACTTGCACTAACGAGCTATTATTTCTTGCAGGAGTGGAAAGAGTACCTACCTTCAACAAATGTGCCTTCTAGTTATTCTTGCTCAGATTGGATGTTATGTTCCAGCACAATTCTCAACCTTGAGAGTTGTTGATCGTATATTCACAAGAATGGGCACAGAAGATAGTCTAGAGTCCAACTCCAGCACAGTATTGTTTTCCTACGAAATTCATTTTCTTTTAACTAATAATCCATAGTTTGAATTTCAAAGCAAGGATTAACACCAGAAAAGCATCTTGACACTAGTATATTACGGGGTTGCAGTTCATGACAGAGATGAAGGAAACAGCTTTTGTGATGCAGAATGTCTCCCATAGGCAAACTAATCTACTGTGAACTTGAAGGACTCTCGAAATGTTCCACCATTCATTGAGATGTTTTGTTCACTGGCATGCAGGAGTCTCGTTGTCGTGGATGAACTTGGGAGGGCAACATCTTCTTCCGATGGATTTGCAATTGCATGGAGCTGCTGCGAATATCTTTTATCACTGAAAGCGTAATATGACAATGCATATTATTTTCATTTATAGTCTAATCAATCAGGTCGCAGATGCCTACTTATAACCTAAAAACACCTATTCTCTTATCTCTCATTTAGACATCAGTACTTGTTTGTAATTTCATTTATAGTCCCTTTTCCACTATCCTTTATGCATTGGGGTTTAGTTTTTCTAAAGGATTGATCTGGTCAGGTCATCGACTTTAGTCTATAGGTAGTTAATTTGACTATTTGAGTAGATTTAAGATTTTCGATTACTATCTGTTCTTATACTCACTTGTGAACTTCAAAATAGGTACTTACCGCTTCCTTTCTCTTCCTCAGCTATACCATATTTGCCACTCATATGGACGGCCTATCAGAACTAGTAACCATCTATCCAAACGTAAAAATTCTTCACTTTCATGTTGATATAAGGAATAACCGTTTGGATTTCAAGGTAACACTAGGCATTTCCGTAAATCTATTATCTATGTTACCGTCGTTTGTCTGACTGATTATTTGAATCATTGATTAGTTTCAACTAAAGGATGGAATTAGACATGTACCACACTATGGCCTTCTATTAGCAGAAGTGGCAGGACTGCCAAGCTCAGTTATTGAAACTGCAAAAAACATTACTTCCAGGATCATGGAAAAGGTACTTACTAATACTCCAAAATTTTCCAATTCATGAACACATTACTCTTGTCCCACTCTAAATAGGAAAAACCAAAATTCTTTTTTTAAATCTATCAACGAAGACGATTCAAGTCTTTTCAGTTTTCGTAAAAGAGAACGCCTCATTCCCACATCGATAGATTTGATGCTAGATGAAGTCTTTATANATTCTTTTTTTAAATCTATCAACGAAGACGATTCAAGTCTTTTCAGTTTTCGTAAAAGAGAACGCCCCATTCCCACATCGATAGATTTGATGCTAGATGAAGTCTTTATAAGTAGGCTGGCGCAACAAGTGATTGCCGAGCTCGGTAATGCTAGCTTGTAACCCAAATGGGGGCATCAAGGTGGTTGGAGGTTGGCTCAGCCCATCTGGTAGGGAATATGGGGTTACTCTCTGGCCCGTCCGTTCCAAGTAGGGAGTTGGGCCGTTGTCTCTGGGCGAAGGCCCAAAGTCAGCGGTCCCTAGAGGCGAAGGGAACCGCGTGAGGCTGGCTTCACAGAGCAGCGTCACCTTCCTCTCCCGTCGGTGGAAGGATAGCGGGCCGGTTCTCCATATCCCAATATACCCGATGGGTAGTCCTCAGCCTAACAACCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATCTCATTTCCATTATATTATTAAATATTTCAAATTGTTTAGGAAGAAAGACGGATGGAGATAAACTACTTGCAGTACCATCCTATTAGAATGGCTTATAATGTAGCTCAGCGGTTGATTTGTTTGAAACATTCCAGTCATGATGAGGATTCAATCCGAGAAGCATTACAAAACCTTAAAGAA

mRNA sequence

GATGAACTGATGAGCAATGAACAACTGTTCTTTGGGCTCTCTCAAGCTCTCCGTAAATTTCCTAAAGAGACCGGTAAGCCTTTAGAAATCCAAAAGAAAGTTACCAATGAAGTTTTGGGTGCTGATAATGCTAAAAAGAGCCAAAGTTTAATATCTAGCATTATTCTGCTGAAAACTTCTCTCGAGGCATTGCCTTTACTTTCAAAGGTGCTTAAAGAAGCAAAGAATTTTCTTCTTGCAAACATCTACAATTCTGTTTGTGAAAATGAAAAATTTGCAACCATTAGAAGGAGGATTGGGGAGGTTATCGATGAGGATGTTCTTCATGCTAGGGTTCCTTTTATTGCCCGCACTCAGCAGTGTTTTGCGGTCAAGGCTGGAATTGATGGACTGCTTGATATCGCAAGAAGGACTTTCTGTGATACTAGTGAAGCAATACATAATCTTGCTAATAAATACCGAGAGGAGTACAAGCTGCCCAATTTAAAACTGCCATTTAACAATAGACAAGGGTTTTACTTGAGCATTCCTCGGAAAGATGTACAAGGCAAGCTTCCTAGCAAGTTTATTCAGGTCTTGAAGCATGGGAACAATATACGATGCTCTACTCTGGAACTTGCTTCTGTGAGTATGTTTATTATACTGAATGTTAGAAACAAGTCTGCAGCAGGAGAATGCTATATACGGACAGAAATTTGCCTGGAAGGACTGGTAGATGCCATAAGAGAGGACGTCTCTATGCTCACACTGCTTGCAGAAGTCTTGTGTCTCTTAGATATGATGGTTAATTCTTTTGCACATACAATATCTTCGAAGCCTGTGGATAGATATACTAGGCCAAATTTTACAGAAAGTGGCCCGATGGCAATTGAAGCTGCGAGACACCCAATCCTAGAAAGTATACACAACGATTTTGTTGTACGTCTAAATTCATTGACAATTACTGATAGCTGTAATGCTAACAGTATATTTCTATCGGAAGCATCAAACATGATAATTGTCATGGGCCCAAATATGAGTGGAAAGAGTACCTACCTTCAACAAATGTGCCTTCTAGTTATTCTTGCTCAGATTGGATGTTATGTTCCAGCACAATTCTCAACCTTGAGAGTTGTTGATCGTATATTCACAAGAATGGGCACAGAAGATAGTCTAGAGTCCAACTCCAGCACAGTATTGAGTCTCGTTGTCGTGGATGAACTTGGGAGGGCAACATCTTCTTCCGATGGATTTGCAATTGCATGGAGCTGCTGCGAATATCTTTTATCACTGAAAGCCTATACCATATTTGCCACTCATATGGACGGCCTATCAGAACTAGTAACCATCTATCCAAACGTAAAAATTCTTCACTTTCATGTTGATATAAGGAATAACCGTTTGGATTTCAAGTTTCAACTAAAGGATGGAATTAGACATGTACCACACTATGGCCTTCTATTAGCAGAAGTGGCAGGACTGCCAAGCTCAGTTATTGAAACTGCAAAAAACATTACTTCCAGGATCATGGAAAAGGAAGAAAGACGGATGGAGATAAACTACTTGCAGTACCATCCTATTAGAATGGCTTATAATGTAGCTCAGCGGTTGATTTGTTTGAAACATTCCAGTCATGATGAGGATTCAATCCGAGAAGCATTACAAAACCTTAAAGAA

Coding sequence (CDS)

GATGAACTGATGAGCAATGAACAACTGTTCTTTGGGCTCTCTCAAGCTCTCCGTAAATTTCCTAAAGAGACCGGTAAGCCTTTAGAAATCCAAAAGAAAGTTACCAATGAAGTTTTGGGTGCTGATAATGCTAAAAAGAGCCAAAGTTTAATATCTAGCATTATTCTGCTGAAAACTTCTCTCGAGGCATTGCCTTTACTTTCAAAGGTGCTTAAAGAAGCAAAGAATTTTCTTCTTGCAAACATCTACAATTCTGTTTGTGAAAATGAAAAATTTGCAACCATTAGAAGGAGGATTGGGGAGGTTATCGATGAGGATGTTCTTCATGCTAGGGTTCCTTTTATTGCCCGCACTCAGCAGTGTTTTGCGGTCAAGGCTGGAATTGATGGACTGCTTGATATCGCAAGAAGGACTTTCTGTGATACTAGTGAAGCAATACATAATCTTGCTAATAAATACCGAGAGGAGTACAAGCTGCCCAATTTAAAACTGCCATTTAACAATAGACAAGGGTTTTACTTGAGCATTCCTCGGAAAGATGTACAAGGCAAGCTTCCTAGCAAGTTTATTCAGGTCTTGAAGCATGGGAACAATATACGATGCTCTACTCTGGAACTTGCTTCTGTGAGTATGTTTATTATACTGAATGTTAGAAACAAGTCTGCAGCAGGAGAATGCTATATACGGACAGAAATTTGCCTGGAAGGACTGGTAGATGCCATAAGAGAGGACGTCTCTATGCTCACACTGCTTGCAGAAGTCTTGTGTCTCTTAGATATGATGGTTAATTCTTTTGCACATACAATATCTTCGAAGCCTGTGGATAGATATACTAGGCCAAATTTTACAGAAAGTGGCCCGATGGCAATTGAAGCTGCGAGACACCCAATCCTAGAAAGTATACACAACGATTTTGTTGTACGTCTAAATTCATTGACAATTACTGATAGCTGTAATGCTAACAGTATATTTCTATCGGAAGCATCAAACATGATAATTGTCATGGGCCCAAATATGAGTGGAAAGAGTACCTACCTTCAACAAATGTGCCTTCTAGTTATTCTTGCTCAGATTGGATGTTATGTTCCAGCACAATTCTCAACCTTGAGAGTTGTTGATCGTATATTCACAAGAATGGGCACAGAAGATAGTCTAGAGTCCAACTCCAGCACAGTATTGAGTCTCGTTGTCGTGGATGAACTTGGGAGGGCAACATCTTCTTCCGATGGATTTGCAATTGCATGGAGCTGCTGCGAATATCTTTTATCACTGAAAGCCTATACCATATTTGCCACTCATATGGACGGCCTATCAGAACTAGTAACCATCTATCCAAACGTAAAAATTCTTCACTTTCATGTTGATATAAGGAATAACCGTTTGGATTTCAAGTTTCAACTAAAGGATGGAATTAGACATGTACCACACTATGGCCTTCTATTAGCAGAAGTGGCAGGACTGCCAAGCTCAGTTATTGAAACTGCAAAAAACATTACTTCCAGGATCATGGAAAAGGAAGAAAGACGGATGGAGATAAACTACTTGCAGTACCATCCTATTAGAATGGCTTATAATGTAGCTCAGCGGTTGATTTGTTTGAAACATTCCAGTCATGATGAGGATTCAATCCGAGAAGCATTACAAAACCTTAAAGAA

Protein sequence

DELMSNEQLFFGLSQALRKFPKETGKPLEIQKKVTNEVLGADNAKKSQSLISSIILLKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIARTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHPILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVLSLVVVDELGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPIRMAYNVAQRLICLKHSSHDEDSIREALQNLKE

Homology

[Close]

BLAST of Cp4.1LG05g02490 vs. ExPASy Swiss-Prot
Match: F4JP48 (DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana OX=3702 GN=MSH4 PE=2 SV=1)

HSP 1 Score: 815.1 bits (2104), Expect = 4.9e-235
Identity = 416/572 (72.73%), Postives = 486/572 (84.97%), Query Frame = 0


Query: 1   DELMSNEQLFFGLSQALRKFPKETGKPL----EIQKKVTNEVLGADNAKKSQSLISSIIL 60
           DELMSNEQLFFGLSQ LRKFPKET + L       KKVT  V+G +N +KSQ++ISSIIL
Sbjct: 233 DELMSNEQLFFGLSQVLRKFPKETDRVLCHFCFKPKKVTEAVIGFENTRKSQNMISSIIL 292

Query: 61  LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 120
           LKT+L+ALP+L+KVLK+AK FLLAN+Y SVCEN+++A+IR++IGEVID+DVLHARVPF+A
Sbjct: 293 LKTALDALPILAKVLKDAKCFLLANVYKSVCENDRYASIRKKIGEVIDDDVLHARVPFVA 352

Query: 121 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 180
           RTQQCFA+KAGIDG LDIARRTFCDTSEAIHNLA+KYREE+ LPNLKLPFNNRQGF+  I
Sbjct: 353 RTQQCFALKAGIDGFLDIARRTFCDTSEAIHNLASKYREEFNLPNLKLPFNNRQGFFFRI 412

Query: 181 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEG 240
           P+K+VQGKLP+KF QV+KHG NI CS+LELAS      LNVRNKSAAGEC+IRTE CLE 
Sbjct: 413 PQKEVQGKLPNKFTQVVKHGKNIHCSSLELAS------LNVRNKSAAGECFIRTETCLEA 472

Query: 241 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 300
           L+DAIRED+S LTLLAEVLCLLDM+VNSFAHTIS+KPVDRY+RP  T+SGP+AI+A RHP
Sbjct: 473 LMDAIREDISALTLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGRHP 532

Query: 301 ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 360
           ILESIHNDFV             +NSIF+SEA+NM++VMGPNMSGKSTYLQQ+CL+VILA
Sbjct: 533 ILESIHNDFV-------------SNSIFMSEATNMLVVMGPNMSGKSTYLQQVCLVVILA 592

Query: 361 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDE 420
           QIGCYVPA+F+T+RVVDRIFTRMGT D+LESNSST +                SL+V+DE
Sbjct: 593 QIGCYVPARFATIRVVDRIFTRMGTMDNLESNSSTFMTEMRETAFIMQNVTNRSLIVMDE 652

Query: 421 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 480
           LGRATSSSDG A+AWSCCEYLLSLKAYT+FATHMD L+EL TIYPNVK+LHF+VDIR+NR
Sbjct: 653 LGRATSSSDGLAMAWSCCEYLLSLKAYTVFATHMDSLAELATIYPNVKVLHFYVDIRDNR 712

Query: 481 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPI 540
           LDFKFQL+DG  HVPHYGLLLAEVAGLPS+VI+TA+ IT RI +KE +R+E+N  ++H I
Sbjct: 713 LDFKFQLRDGTLHVPHYGLLLAEVAGLPSTVIDTARIITKRITDKENKRIELNCGKHHEI 772

Query: 541 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 553
              Y VAQRLICLK+S   EDSIR+ALQNL E
Sbjct: 773 HRIYRVAQRLICLKYSRQTEDSIRQALQNLNE 785

[Close]

BLAST of Cp4.1LG05g02490 vs. ExPASy Swiss-Prot
Match: O15457 (MutS protein homolog 4 OS=Homo sapiens OX=9606 GN=MSH4 PE=1 SV=2)

HSP 1 Score: 298.9 bits (764), Expect = 1.2e-79
Identity = 198/577 (34.32%), Postives = 334/577 (57.89%), Query Frame = 0


Query: 2   ELMSNEQLFFGLSQALRKFPKETGKPLEIQKKVTNEVLGADNAKKSQSLISSIILLKTSL 61
           EL+ +E+LFFGL   + +F  +T + L +  ++  +    D    ++S I+++I LK +L
Sbjct: 374 ELLQDEELFFGLQSVISRF-LDTEQLLSVLVQIPKQ----DTVNAAESKITNLIYLKHTL 433

Query: 62  EALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIARTQQC 121
           E +  L   +K     LL   Y S+ E+++F  I  +I  VI++D  + +     RTQ+C
Sbjct: 434 ELVDPLKIAMKNCNTPLLRAYYGSL-EDKRFGIILEKIKTVINDDARYMKGCLNMRTQKC 493

Query: 122 FAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPRKDV 181
           +AV++ I+  LDIARRT+ +  + I  + ++  E+Y LP L+  F++ +GF++ +    +
Sbjct: 494 YAVRSNINEFLDIARRTYTEIVDDIAGMISQLGEKYSLP-LRTSFSSARGFFIQMTTDCI 553

Query: 182 ---QGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEGLV 241
                +LPS+FI++ K  N+   ++ +L      I +N R + +  E Y  T + +  L+
Sbjct: 554 ALPSDQLPSEFIKISKVKNSYSFTSADL------IKMNERCQESLREIYHMTYMIVCKLL 613

Query: 242 DAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHPIL 301
             I E +  L  L++ + +LDM++ SFAH  +   +  Y RP FT++  +AI+   HPIL
Sbjct: 614 SEIYEHIHCLYKLSDTVSMLDMLL-SFAHACT---LSDYVRPEFTDT--LAIKQGWHPIL 673

Query: 302 ESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQI 361
           E I  +  +            AN+ +++E SN +I+ GPNMSGKSTYL+Q+ L  I+AQI
Sbjct: 674 EKISAEKPI------------ANNTYVTEGSNFLIITGPNMSGKSTYLKQIALCQIMAQI 733

Query: 362 GCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDELG 421
           G YVPA++S+ R+  +IFTR+ T+D +E+NSST +                SL+++DELG
Sbjct: 734 GSYVPAEYSSFRIAKQIFTRISTDDDIETNSSTFMKEMKEIAYILHNANDKSLILIDELG 793

Query: 422 RATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVD-IRNNRL 481
           R T++ +G  I ++ CEYLLSLKA+T+FATH   L  +  +YPNV+ +HF V  ++N   
Sbjct: 794 RGTNTEEGIGICYAVCEYLLSLKAFTLFATHFLELCHIDALYPNVENMHFEVQHVKNTSR 853

Query: 482 D-----FKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQ 541
           +     + ++L  G+    +YGL  AEV+ LP S++  AK IT++I  ++  + + +  +
Sbjct: 854 NKEAILYTYKLSKGLTEEKNYGLKAAEVSSLPPSIVLDAKEITTQI-TRQILQNQRSTPE 913

Query: 542 YHPIRMAYNVAQRLI-CLKHSSHDEDSIREALQNLKE 553
               R  Y++A RL+   ++S  D DS+R  L NLK+
Sbjct: 914 MERQRAVYHLATRLVQTARNSQLDPDSLRIYLSNLKK 918

[Close]

BLAST of Cp4.1LG05g02490 vs. ExPASy Swiss-Prot
Match: Q99MT2 (MutS protein homolog 4 OS=Mus musculus OX=10090 GN=Msh4 PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.0e-75
Identity = 193/577 (33.45%), Postives = 331/577 (57.37%), Query Frame = 0


Query: 2   ELMSNEQLFFGLSQALRKFPKETGKPLEIQKKVTNEVLGADNAKKSQSLISSIILLKTSL 61
           EL+ +E+LFFGL   + +F  +T + L +  ++  +    D    ++S I+++I LK +L
Sbjct: 396 ELLQDEELFFGLQSVISRF-LDTEQLLSVLVQIPKQ----DTVNAAESKITNLIYLKHTL 455

Query: 62  EALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIARTQQC 121
           E +  L   LK     LL   Y S+ E+ +F  I  +I  VI++D  + +     RTQ+C
Sbjct: 456 ELVEPLKVTLKNCSTPLLRAYYGSL-EDHRFGLILDKIKTVINDDARYMKGCLNMRTQKC 515

Query: 122 FAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPRKDV 181
           +AV++ I   LDIARRT+ +  + I  +  +  E+Y LP L+  F++ +GF++ +     
Sbjct: 516 YAVRSNISEFLDIARRTYTEIVDDIAGMIAQLAEKYSLP-LRTSFSSSRGFFIQMTTDCA 575

Query: 182 ---QGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEGLV 241
                +LPS+FI++ K  N+   ++ +L      I +N R + +  E Y  T + +  L+
Sbjct: 576 ALSSDQLPSEFIKISKVKNSYSFTSADL------IKMNERCQESLREIYHMTYMIVCKLL 635

Query: 242 DAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHPIL 301
             I E +  L  L++ + +LDM++ SFAH  +   +  Y RP FT++  +AI+   HPIL
Sbjct: 636 SEIYEHIHCLYKLSDTVSMLDMLL-SFAHACT---LSDYVRPEFTDT--LAIKQGWHPIL 695

Query: 302 ESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQI 361
           E I  +  V            AN+ +++E SN++I+ GPNMSGKSTYL+Q+ L  I+AQI
Sbjct: 696 EKISAEKPV------------ANNTYITEGSNVLIITGPNMSGKSTYLKQIALCQIMAQI 755

Query: 362 GCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDELG 421
           G YVPA++++ R+  +IFTR+ T+D +E+NSST +                SL+++DELG
Sbjct: 756 GSYVPAEYASFRIAAQIFTRISTDDDIETNSSTFMKEMKEIAYILHNANDKSLILIDELG 815

Query: 422 RATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVD-IRN--- 481
           R T++ +G  I+++ CE+LLS+KA+T+F TH   L  L  +Y NV+ +HF V  ++N   
Sbjct: 816 RGTNTEEGIGISYAVCEHLLSIKAFTLFTTHFLELCHLDALYLNVENMHFEVQHVKNTSR 875

Query: 482 --NRLDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQ 541
             + + + ++L  G+    +YGL  AE + LPSS++  A++IT++I  ++  + + +  +
Sbjct: 876 NKDAILYTYKLSRGLTEEKNYGLKAAEASSLPSSIVLDARDITTQI-TRQILQNQRSSPE 935

Query: 542 YHPIRMAYNVAQRLI-CLKHSSHDEDSIREALQNLKE 553
               R  Y++A RL+   ++S  + D +R  L NLK+
Sbjct: 936 MDRQRAVYHLATRLVQAARNSQLEPDRLRTYLSNLKK 940

[Close]

BLAST of Cp4.1LG05g02490 vs. ExPASy Swiss-Prot
Match: A5CDU2 (DNA mismatch repair protein MutS OS=Orientia tsutsugamushi (strain Boryong) OX=357244 GN=mutS PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.2e-47
Identity = 163/532 (30.64%), Postives = 264/532 (49.62%), Query Frame = 0


Query: 1   DELMSNEQLFFGLSQALRKFPKETGKPLEIQKKVTNEVLGADNAKKSQSLISSIILLKTS 60
           D    N QL   L Q ++  P       +I++ ++  ++     K  +S+    I LK +
Sbjct: 344 DFFYQNLQLVENLRQLVKLVP-------DIERALSRILIAKALPKDLESI---KISLKIA 403

Query: 61  LEALPLLSKVLKEAKN-FLLANIYNSVC-ENEKFATIRRRIGEVIDEDVLHARVPFIART 120
           L     L+KVL+E      L  IYN +  +NE +        E++D  +L          
Sbjct: 404 LSIKKELNKVLEEGNTPKYLEEIYNPLFGDNELY--------ELLDSALLD---DLSNSA 463

Query: 121 QQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPR 180
             C  +K+     L+  R    ++S  I  L  +YR+E  +  LK+  NN  G ++ +  
Sbjct: 464 NDCGFIKSSYSTKLEELRNLIHNSSNFIEQLKLQYRQETCIETLKICHNNVWGMFIEVSS 523

Query: 181 KDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEGLV 240
           K+      SKF+        +R +T EL ++    +LN +  +AA E  I  E+C     
Sbjct: 524 KNAHKITDSKFVHKQTTTTAVRFTTTELQTLEA-KMLNAKTMAAALEQEILAELC----- 583

Query: 241 DAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHPIL 300
            AI      L+ LA+ + L+D+  N FA+ IS +    Y RP  T      I   RH ++
Sbjct: 584 KAISLKSEKLSHLAKSISLIDVFCN-FAY-ISHE--YNYCRPEITSDLAFNIVDGRHAVI 643

Query: 301 ESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQI 360
           E +    + + +   I++ CN     L     + ++ GPNM+GKST+L+Q  ++VILAQI
Sbjct: 644 EKL----ITKKHESFISNDCN-----LQNDQRIWLITGPNMAGKSTFLRQNAIIVILAQI 703

Query: 361 GCYVPAQFSTLRVVDRIFTRMGTEDSLESN----------------SSTVLSLVVVDELG 420
           GCYVPAQ + + VVD++F+R+G  D L S                  ST +SLV++DE+G
Sbjct: 704 GCYVPAQSAQIGVVDKLFSRIGAADDLASGQSTFMVEMVETSVILAQSTFMSLVILDEIG 763

Query: 421 RATSSSDGFAIAWSCCEYLLS-LKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNRL 480
           R TS+ DG +IAWSC EY+ S ++   +FATH   L +L +   ++K     +   N++L
Sbjct: 764 RGTSTYDGISIAWSCLEYIHSNIRCRCLFATHYHELVDLASKLLSLKNFTVKIHDSNDKL 823

Query: 481 DFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEIN 514
            F +++ +G  +   YG+ +AE+AGLP  V+  AK I   ++E E  ++ IN
Sbjct: 824 SFLYKIIEGAAN-KSYGIHVAELAGLPRIVLNRAKEI---LLELEHNKVNIN 831

[Close]

BLAST of Cp4.1LG05g02490 vs. ExPASy Swiss-Prot
Match: A7HMG4 (DNA mismatch repair protein MutS OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) OX=381764 GN=mutS PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.3e-46
Identity = 160/539 (29.68%), Postives = 260/539 (48.24%), Query Frame = 0


Query: 1   DELMSNE-----QLFFGLSQALRKFPKETGKPLE-IQKKVTNEVLGADNAKKSQSLISSI 60
           D L++NE        + L + + +   ++ KP + I  K T EV+  +  K++ S    +
Sbjct: 326 DPLLTNEIREYLNGVYDLERIINRLEYDSAKPKDLISLKTTLEVV--EPIKEALSTNEKL 385

Query: 61  ILLKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPF 120
           I L    + LP LS++  + +N LL      + E +                        
Sbjct: 386 IQL---AQMLPDLSQIKVKIENTLLEEFEGELGEGK------------------------ 445

Query: 121 IARTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYL 180
                    +K G+   LD  R     ++E +     + R +  +  LK+ FNN  G+Y+
Sbjct: 446 --------IIKEGVSKELDEYRELLYHSNEKLKEFEERERAKTGIQKLKVSFNNVFGYYI 505

Query: 181 SIPRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICL 240
            IP+  V+   P ++ ++    N  R +T EL       IL  + K    E  I  +IC 
Sbjct: 506 EIPKGQVK-FAPQEYTRIQTLVNAERYTTTELKEFEQ-KILAAKEKVEILEKTIFKQIC- 565

Query: 241 EGLVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAAR 300
               D ++     L  LAE+L  +D+  N FA+      +  Y++P  ++S    +   R
Sbjct: 566 ----DELKGYTQDLRKLAEMLSWIDVYSN-FAYV---SKLYSYSKPEISDS-EFKVLNGR 625

Query: 301 HPILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVI 360
           HP++E   ++FV              N I++S+   M I+ GPNMSGKSTY++Q+ L+ +
Sbjct: 626 HPVVERFVDEFV-------------PNDIYMSDELRMYILTGPNMSGKSTYIRQVGLIAL 685

Query: 361 LAQIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVV 420
           + QIGC+VPAQ++ + V DRIFTRMG  D + +  ST L                SLV++
Sbjct: 686 MTQIGCFVPAQYAKVPVFDRIFTRMGARDDISTGKSTFLTEMNEVALILSKATQKSLVLL 745

Query: 421 DELGRATSSSDGFAIAWSCCEYLLS-LKAYTIFATHMDGLSELVTIYPNVKILHFHVDIR 480
           DE+GR TS+ DG +IAW+  EY+ + +K  TIFATH   L+EL   Y  +K L   V   
Sbjct: 746 DEVGRGTSTFDGISIAWAMSEYIYNEIKCKTIFATHFTELTELSEGYSGIKNLTVDVKET 801

Query: 481 NNRLDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQ 517
            + + F  ++ +G+     YG+ +A +AGLP S+IE AK I + I+EK +   ++  L+
Sbjct: 806 PDGVVFLHKVVEGVAD-RSYGIEVAAIAGLPESIIERAKEILNIIVEKSDLEKKVGVLK 801

[Close]

BLAST of Cp4.1LG05g02490 vs. NCBI nr
Match: XP_023521478.1 (DNA mismatch repair protein MSH4-like [Cucurbita pepo subsp. pepo] >XP_023532701.1 DNA mismatch repair protein MSH4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 989 bits (2556), Expect = 0.0
Identity = 526/572 (91.96%), Postives = 528/572 (92.31%), Query Frame = 0


Query: 1   DELMSNEQLFFGLSQALRKFPKETGKPL----EIQKKVTNEVLGADNAKKSQSLISSIIL 60
           DELMSNEQLFFGLSQALRKFPKET + L      QKKVTNEVLGADNAKKSQSLISSIIL
Sbjct: 233 DELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLGADNAKKSQSLISSIIL 292

Query: 61  LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 120
           LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA
Sbjct: 293 LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 352

Query: 121 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 180
           RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI
Sbjct: 353 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 412

Query: 181 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEG 240
           PRKDVQGKLPSKFIQVLKHGNNIRCSTLELAS      LNVRNKSAAGECYIRTEICLEG
Sbjct: 413 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELAS------LNVRNKSAAGECYIRTEICLEG 472

Query: 241 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 300
           LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP
Sbjct: 473 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 532

Query: 301 ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 360
           ILESIHNDFV             ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA
Sbjct: 533 ILESIHNDFV-------------ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 592

Query: 361 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDE 420
           QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSST +                SLVVVDE
Sbjct: 593 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTFMTEMKETAFVMQNVSHRSLVVVDE 652

Query: 421 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 480
           LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR
Sbjct: 653 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 712

Query: 481 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPI 540
           LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPI
Sbjct: 713 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPI 772

Query: 541 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 552
           RMAYNVAQRLICLKHSSHDEDSIREALQNLKE
Sbjct: 773 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 785

[Close]

BLAST of Cp4.1LG05g02490 vs. NCBI nr
Match: XP_022996171.1 (DNA mismatch repair protein MSH4 [Cucurbita maxima])

HSP 1 Score: 985 bits (2547), Expect = 0.0
Identity = 524/572 (91.61%), Postives = 528/572 (92.31%), Query Frame = 0


Query: 1   DELMSNEQLFFGLSQALRKFPKETGKPL----EIQKKVTNEVLGADNAKKSQSLISSIIL 60
           DELMSNEQLFFGLSQALRKFPKET + L      QKKVTNEVLGADNAKKSQSLISSIIL
Sbjct: 233 DELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLGADNAKKSQSLISSIIL 292

Query: 61  LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 120
           LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA
Sbjct: 293 LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 352

Query: 121 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 180
           RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI
Sbjct: 353 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 412

Query: 181 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEG 240
           PRKDVQGKLPSKFIQVLKHGNNIRCSTLELAS      LNVRNKSAAGECYIRTEICLEG
Sbjct: 413 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELAS------LNVRNKSAAGECYIRTEICLEG 472

Query: 241 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 300
           LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP
Sbjct: 473 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 532

Query: 301 ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 360
           ILESIHNDFV             ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA
Sbjct: 533 ILESIHNDFV-------------ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 592

Query: 361 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDE 420
           QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSST +                SLVVVDE
Sbjct: 593 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTFMTEMKETAFVMQNVSHRSLVVVDE 652

Query: 421 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 480
           LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR
Sbjct: 653 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 712

Query: 481 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPI 540
           LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETA+NITSRIMEKEERRMEINYLQYHPI
Sbjct: 713 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETARNITSRIMEKEERRMEINYLQYHPI 772

Query: 541 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 552
           RMAYNVAQRLICLK+SSHDEDSIREALQNLKE
Sbjct: 773 RMAYNVAQRLICLKYSSHDEDSIREALQNLKE 785

[Close]

BLAST of Cp4.1LG05g02490 vs. NCBI nr
Match: XP_022957703.1 (DNA mismatch repair protein MSH4 [Cucurbita moschata])

HSP 1 Score: 981 bits (2535), Expect = 0.0
Identity = 521/572 (91.08%), Postives = 527/572 (92.13%), Query Frame = 0


Query: 1   DELMSNEQLFFGLSQALRKFPKETGKPL----EIQKKVTNEVLGADNAKKSQSLISSIIL 60
           DELMSNEQLFFGLSQALRKFPKET + L      QKKVTNEVLGADNAKKSQSLISSIIL
Sbjct: 233 DELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLGADNAKKSQSLISSIIL 292

Query: 61  LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 120
           LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA
Sbjct: 293 LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 352

Query: 121 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 180
           RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI
Sbjct: 353 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 412

Query: 181 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEG 240
           PRKDVQGKLPSKFIQVLKHGNNIR STLELAS      LNVRNKSAAGECYIRTEICLEG
Sbjct: 413 PRKDVQGKLPSKFIQVLKHGNNIRFSTLELAS------LNVRNKSAAGECYIRTEICLEG 472

Query: 241 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 300
           LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP
Sbjct: 473 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 532

Query: 301 ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 360
           ILESIHNDFV             ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA
Sbjct: 533 ILESIHNDFV-------------ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 592

Query: 361 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDE 420
           QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSST +                SLVVVDE
Sbjct: 593 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTFMTEMKETAFVMQNVSHRSLVVVDE 652

Query: 421 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 480
           LGRATSSSDGFAIAWSCCEYLLSLKAYTIF+THMDGLSELVTIYPNVK+LHFHVDIRNNR
Sbjct: 653 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFSTHMDGLSELVTIYPNVKVLHFHVDIRNNR 712

Query: 481 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPI 540
           LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETA+NITSRI+EKEERRMEINYLQYHPI
Sbjct: 713 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETARNITSRILEKEERRMEINYLQYHPI 772

Query: 541 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 552
           RMAYNVAQRLICLKHSSHDEDSIREALQNLKE
Sbjct: 773 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 785

[Close]

BLAST of Cp4.1LG05g02490 vs. NCBI nr
Match: KAG7036113.1 (DNA mismatch repair protein MSH4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 971 bits (2510), Expect = 0.0
Identity = 513/556 (92.27%), Postives = 517/556 (92.99%), Query Frame = 0


Query: 1   DELMSNEQLFFGLSQALRKFPKETGKPL----EIQKKVTNEVLGADNAKKSQSLISSIIL 60
           DELMSNEQLFFGLSQALRKFPKET + L      QKKVTNEVLGADNAKKSQSLISSIIL
Sbjct: 248 DELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLGADNAKKSQSLISSIIL 307

Query: 61  LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 120
           LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA
Sbjct: 308 LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 367

Query: 121 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 180
           RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI
Sbjct: 368 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 427

Query: 181 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEG 240
           PRKDVQGKLPSKFIQ                       LNVRNKSAAGECYIRTEICLEG
Sbjct: 428 PRKDVQGKLPSKFIQ-----------------------LNVRNKSAAGECYIRTEICLEG 487

Query: 241 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 300
           LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTE GPMAIEAARHP
Sbjct: 488 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTECGPMAIEAARHP 547

Query: 301 ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 360
           ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA
Sbjct: 548 ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 607

Query: 361 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVLSLVVVDELGRATSSSDGFAIAWS 420
           QIGCYVPA+FSTLRVVDRIFTRMGTEDSLES       LVVVDELGRATSSSDGFAIAWS
Sbjct: 608 QIGCYVPARFSTLRVVDRIFTRMGTEDSLES-------LVVVDELGRATSSSDGFAIAWS 667

Query: 421 CCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPH 480
           CCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPH
Sbjct: 668 CCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPH 727

Query: 481 YGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPIRMAYNVAQRLICLKHS 540
           YGLLLAEVAGLPSSVIETA+NITSRI+EKEERRMEINYLQYHPIRMAYNVAQRLICLKHS
Sbjct: 728 YGLLLAEVAGLPSSVIETARNITSRILEKEERRMEINYLQYHPIRMAYNVAQRLICLKHS 773

Query: 541 SHDEDSIREALQNLKE 552
           SHDEDSIREALQNLKE
Sbjct: 788 SHDEDSIREALQNLKE 773

[Close]

BLAST of Cp4.1LG05g02490 vs. NCBI nr
Match: KGN49752.2 (hypothetical protein Csa_000516 [Cucumis sativus])

HSP 1 Score: 944 bits (2439), Expect = 0.0
Identity = 495/572 (86.54%), Postives = 519/572 (90.73%), Query Frame = 0


Query: 1   DELMSNEQLFFGLSQALRKFPKETGKPL----EIQKKVTNEVLGADNAKKSQSLISSIIL 60
           DELMSNEQLFFGLSQALRKFPKET + L      QKKVTNEVL   +AKKSQ+LISSIIL
Sbjct: 230 DELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLHPSDAKKSQNLISSIIL 289

Query: 61  LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 120
           LKT+LEALPLLSKVLKEAK+FLLANIY S+CENEK+  IR+RIGEVIDEDVLHARVPFIA
Sbjct: 290 LKTALEALPLLSKVLKEAKSFLLANIYKSICENEKYTNIRKRIGEVIDEDVLHARVPFIA 349

Query: 121 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 180
           RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKL NLKLPFNNRQGFYLSI
Sbjct: 350 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLSNLKLPFNNRQGFYLSI 409

Query: 181 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEG 240
           P KDVQGKLP+KFIQVLKHGNNIRCSTLELASVS  + LNVRNKSAAGECYIRTEICLEG
Sbjct: 410 PHKDVQGKLPNKFIQVLKHGNNIRCSTLELASVSTSVTLNVRNKSAAGECYIRTEICLEG 469

Query: 241 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 300
           LVDAIREDVSMLTLLAEVLCLLDM+VNSFAHTIS+KPVDRYTRPNFTE+GPMAIEAARHP
Sbjct: 470 LVDAIREDVSMLTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARHP 529

Query: 301 ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 360
           ILESIHNDFV             ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA
Sbjct: 530 ILESIHNDFV-------------ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 589

Query: 361 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDE 420
           QIGCYVPA FSTLRVVDRIFTRMGT+DSLESNSST +                SLVVVDE
Sbjct: 590 QIGCYVPAHFSTLRVVDRIFTRMGTDDSLESNSSTFMTEMKETAFVMQNVSQRSLVVVDE 649

Query: 421 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 480
           LGRATSSSDGFAIAWSCCEYLL+LKAYTIFATHM+GLSEL TIYPNVKILHFHVDIRN+R
Sbjct: 650 LGRATSSSDGFAIAWSCCEYLLTLKAYTIFATHMEGLSELATIYPNVKILHFHVDIRNHR 709

Query: 481 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPI 540
           LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETA++ITSRI EKEERRMEIN+LQYHPI
Sbjct: 710 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETARDITSRIKEKEERRMEINHLQYHPI 769

Query: 541 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 552
           RM YNVAQRLICLK+SSHDEDS+REAL+NLKE
Sbjct: 770 RMTYNVAQRLICLKYSSHDEDSVREALRNLKE 788

[Close]

BLAST of Cp4.1LG05g02490 vs. ExPASy TrEMBL
Match: A0A6J1K3Y6 (DNA mismatch repair protein MSH4 OS=Cucurbita maxima OX=3661 GN=LOC111491480 PE=4 SV=1)

HSP 1 Score: 985 bits (2547), Expect = 0.0
Identity = 524/572 (91.61%), Postives = 528/572 (92.31%), Query Frame = 0


Query: 1   DELMSNEQLFFGLSQALRKFPKETGKPL----EIQKKVTNEVLGADNAKKSQSLISSIIL 60
           DELMSNEQLFFGLSQALRKFPKET + L      QKKVTNEVLGADNAKKSQSLISSIIL
Sbjct: 233 DELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLGADNAKKSQSLISSIIL 292

Query: 61  LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 120
           LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA
Sbjct: 293 LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 352

Query: 121 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 180
           RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI
Sbjct: 353 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 412

Query: 181 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEG 240
           PRKDVQGKLPSKFIQVLKHGNNIRCSTLELAS      LNVRNKSAAGECYIRTEICLEG
Sbjct: 413 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELAS------LNVRNKSAAGECYIRTEICLEG 472

Query: 241 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 300
           LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP
Sbjct: 473 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 532

Query: 301 ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 360
           ILESIHNDFV             ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA
Sbjct: 533 ILESIHNDFV-------------ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 592

Query: 361 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDE 420
           QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSST +                SLVVVDE
Sbjct: 593 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTFMTEMKETAFVMQNVSHRSLVVVDE 652

Query: 421 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 480
           LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR
Sbjct: 653 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 712

Query: 481 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPI 540
           LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETA+NITSRIMEKEERRMEINYLQYHPI
Sbjct: 713 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETARNITSRIMEKEERRMEINYLQYHPI 772

Query: 541 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 552
           RMAYNVAQRLICLK+SSHDEDSIREALQNLKE
Sbjct: 773 RMAYNVAQRLICLKYSSHDEDSIREALQNLKE 785

[Close]

BLAST of Cp4.1LG05g02490 vs. ExPASy TrEMBL
Match: A0A6J1H107 (DNA mismatch repair protein MSH4 OS=Cucurbita moschata OX=3662 GN=LOC111459167 PE=4 SV=1)

HSP 1 Score: 981 bits (2535), Expect = 0.0
Identity = 521/572 (91.08%), Postives = 527/572 (92.13%), Query Frame = 0


Query: 1   DELMSNEQLFFGLSQALRKFPKETGKPL----EIQKKVTNEVLGADNAKKSQSLISSIIL 60
           DELMSNEQLFFGLSQALRKFPKET + L      QKKVTNEVLGADNAKKSQSLISSIIL
Sbjct: 233 DELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLGADNAKKSQSLISSIIL 292

Query: 61  LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 120
           LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA
Sbjct: 293 LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 352

Query: 121 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 180
           RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI
Sbjct: 353 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 412

Query: 181 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEG 240
           PRKDVQGKLPSKFIQVLKHGNNIR STLELAS      LNVRNKSAAGECYIRTEICLEG
Sbjct: 413 PRKDVQGKLPSKFIQVLKHGNNIRFSTLELAS------LNVRNKSAAGECYIRTEICLEG 472

Query: 241 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 300
           LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP
Sbjct: 473 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 532

Query: 301 ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 360
           ILESIHNDFV             ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA
Sbjct: 533 ILESIHNDFV-------------ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 592

Query: 361 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDE 420
           QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSST +                SLVVVDE
Sbjct: 593 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTFMTEMKETAFVMQNVSHRSLVVVDE 652

Query: 421 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 480
           LGRATSSSDGFAIAWSCCEYLLSLKAYTIF+THMDGLSELVTIYPNVK+LHFHVDIRNNR
Sbjct: 653 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFSTHMDGLSELVTIYPNVKVLHFHVDIRNNR 712

Query: 481 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPI 540
           LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETA+NITSRI+EKEERRMEINYLQYHPI
Sbjct: 713 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETARNITSRILEKEERRMEINYLQYHPI 772

Query: 541 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 552
           RMAYNVAQRLICLKHSSHDEDSIREALQNLKE
Sbjct: 773 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 785

[Close]

BLAST of Cp4.1LG05g02490 vs. ExPASy TrEMBL
Match: A0A5A7TER1 (DNA mismatch repair protein MSH4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00610 PE=4 SV=1)

HSP 1 Score: 942 bits (2435), Expect = 0.0
Identity = 497/572 (86.89%), Postives = 519/572 (90.73%), Query Frame = 0


Query: 1   DELMSNEQLFFGLSQALRKFPKETGKPL----EIQKKVTNEVLGADNAKKSQSLISSIIL 60
           DELMSNEQLFFGLSQALRKFPKET + L      QKKVTNEVL   +AKKSQ+LISSIIL
Sbjct: 230 DELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLHPGDAKKSQNLISSIIL 289

Query: 61  LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 120
           LKT+LEALPLLSK+LKEAK+FLLANIY SVCENEK+A IR+RIGEVIDEDVLHARVPFIA
Sbjct: 290 LKTALEALPLLSKILKEAKSFLLANIYKSVCENEKYANIRKRIGEVIDEDVLHARVPFIA 349

Query: 121 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 180
           RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI
Sbjct: 350 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 409

Query: 181 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEG 240
           P KDVQGKLP+KFIQVLKHGNNIRCSTLELAS      LNVRNKSAAGECY+RTEICLEG
Sbjct: 410 PHKDVQGKLPNKFIQVLKHGNNIRCSTLELAS------LNVRNKSAAGECYLRTEICLEG 469

Query: 241 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 300
           LVDAIREDVSMLTLLAEVLCLLDM+VNSFAHTIS+KPVDRYTRPNFTE+GPMAIEAARHP
Sbjct: 470 LVDAIREDVSMLTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARHP 529

Query: 301 ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 360
           ILESIHNDFV             ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA
Sbjct: 530 ILESIHNDFV-------------ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 589

Query: 361 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDE 420
           QIGCYVPA FSTLRVVDRIFTRMGT+DSLESNSST +                SLVVVDE
Sbjct: 590 QIGCYVPAHFSTLRVVDRIFTRMGTDDSLESNSSTFMTEMKETAFVMQNVSRRSLVVVDE 649

Query: 421 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 480
           LGR+TSSSDGFAIAWSCCE+LL+LKAYTIFATHM+GLSEL TIYPNVKILHFHVDIRNNR
Sbjct: 650 LGRSTSSSDGFAIAWSCCEHLLTLKAYTIFATHMEGLSELATIYPNVKILHFHVDIRNNR 709

Query: 481 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPI 540
           LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETA++ITSRI EKEERRMEINYLQYHPI
Sbjct: 710 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETARDITSRIKEKEERRMEINYLQYHPI 769

Query: 541 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 552
           RMAYNVAQRLICLK+SSHDEDSIREALQNLKE
Sbjct: 770 RMAYNVAQRLICLKYSSHDEDSIREALQNLKE 782

[Close]

BLAST of Cp4.1LG05g02490 vs. ExPASy TrEMBL
Match: A0A1S3ATN6 (DNA mismatch repair protein MSH4 OS=Cucumis melo OX=3656 GN=LOC103482597 PE=4 SV=1)

HSP 1 Score: 942 bits (2435), Expect = 0.0
Identity = 497/572 (86.89%), Postives = 519/572 (90.73%), Query Frame = 0


Query: 1   DELMSNEQLFFGLSQALRKFPKETGKPL----EIQKKVTNEVLGADNAKKSQSLISSIIL 60
           DELMSNEQLFFGLSQALRKFPKET + L      QKKVTNEVL   +AKKSQ+LISSIIL
Sbjct: 230 DELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLHPGDAKKSQNLISSIIL 289

Query: 61  LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 120
           LKT+LEALPLLSK+LKEAK+FLLANIY SVCENEK+A IR+RIGEVIDEDVLHARVPFIA
Sbjct: 290 LKTALEALPLLSKILKEAKSFLLANIYKSVCENEKYANIRKRIGEVIDEDVLHARVPFIA 349

Query: 121 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 180
           RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI
Sbjct: 350 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 409

Query: 181 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEG 240
           P KDVQGKLP+KFIQVLKHGNNIRCSTLELAS      LNVRNKSAAGECY+RTEICLEG
Sbjct: 410 PHKDVQGKLPNKFIQVLKHGNNIRCSTLELAS------LNVRNKSAAGECYLRTEICLEG 469

Query: 241 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 300
           LVDAIREDVSMLTLLAEVLCLLDM+VNSFAHTIS+KPVDRYTRPNFTE+GPMAIEAARHP
Sbjct: 470 LVDAIREDVSMLTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARHP 529

Query: 301 ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 360
           ILESIHNDFV             ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA
Sbjct: 530 ILESIHNDFV-------------ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 589

Query: 361 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDE 420
           QIGCYVPA FSTLRVVDRIFTRMGT+DSLESNSST +                SLVVVDE
Sbjct: 590 QIGCYVPAHFSTLRVVDRIFTRMGTDDSLESNSSTFMTEMKETAFVMQNVSRRSLVVVDE 649

Query: 421 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 480
           LGR+TSSSDGFAIAWSCCE+LL+LKAYTIFATHM+GLSEL TIYPNVKILHFHVDIRNNR
Sbjct: 650 LGRSTSSSDGFAIAWSCCEHLLTLKAYTIFATHMEGLSELATIYPNVKILHFHVDIRNNR 709

Query: 481 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPI 540
           LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETA++ITSRI EKEERRMEINYLQYHPI
Sbjct: 710 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETARDITSRIKEKEERRMEINYLQYHPI 769

Query: 541 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 552
           RMAYNVAQRLICLK+SSHDEDSIREALQNLKE
Sbjct: 770 RMAYNVAQRLICLKYSSHDEDSIREALQNLKE 782

[Close]

BLAST of Cp4.1LG05g02490 vs. ExPASy TrEMBL
Match: A0A0A0KRC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165160 PE=4 SV=1)

HSP 1 Score: 938 bits (2425), Expect = 0.0
Identity = 492/573 (85.86%), Postives = 517/573 (90.23%), Query Frame = 0


Query: 4   MSNEQLFFGLSQALRKFPKETGKPL--------EIQKKVTNEVLGADNAKKSQSLISSII 63
           MSNEQLFFGLSQALRKFPKETGK          + QKKVTNEVL   +AKKSQ+LISSII
Sbjct: 1   MSNEQLFFGLSQALRKFPKETGKFAATAMVKCKKSQKKVTNEVLHPSDAKKSQNLISSII 60

Query: 64  LLKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFI 123
           LLKT+LEALPLLSKVLKEAK+FLLANIY S+CENEK+  IR+RIGEVIDEDVLHARVPFI
Sbjct: 61  LLKTALEALPLLSKVLKEAKSFLLANIYKSICENEKYTNIRKRIGEVIDEDVLHARVPFI 120

Query: 124 ARTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLS 183
           ARTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKL NLKLPFNNRQGFYLS
Sbjct: 121 ARTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLSNLKLPFNNRQGFYLS 180

Query: 184 IPRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLE 243
           IP KDVQGKLP+KFIQVLKHGNNIRCSTLELASVS  + LNVRNKSAAGECYIRTEICL+
Sbjct: 181 IPHKDVQGKLPNKFIQVLKHGNNIRCSTLELASVSTSVTLNVRNKSAAGECYIRTEICLQ 240

Query: 244 GLVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARH 303
           GLVDAIREDVSMLTLLAEVLCLLDM+VNSFAHTIS+KPVDRYTRPNFTE+GPMAIEAARH
Sbjct: 241 GLVDAIREDVSMLTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARH 300

Query: 304 PILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVIL 363
           PILESIHNDFV             ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVIL
Sbjct: 301 PILESIHNDFV-------------ANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVIL 360

Query: 364 AQIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVD 423
           AQIGCYVPA FSTLRVVDRIFTRMGT+DSLESNSST +                SLVVVD
Sbjct: 361 AQIGCYVPAHFSTLRVVDRIFTRMGTDDSLESNSSTFMTEMKETAFVMQNVSQRSLVVVD 420

Query: 424 ELGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNN 483
           ELGRATSSSDGFAIAWSCCEYLL+LKAYTIFATHM+GLSEL TIYPNVKILHFHVDIRN+
Sbjct: 421 ELGRATSSSDGFAIAWSCCEYLLTLKAYTIFATHMEGLSELATIYPNVKILHFHVDIRNH 480

Query: 484 RLDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHP 543
           RLDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETA++ITSRI EKEERRMEIN+LQYHP
Sbjct: 481 RLDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETARDITSRIKEKEERRMEINHLQYHP 540

Query: 544 IRMAYNVAQRLICLKHSSHDEDSIREALQNLKE 552
           IRM YNVAQRLICLK+SSHDEDS+REAL+NLKE
Sbjct: 541 IRMTYNVAQRLICLKYSSHDEDSVREALRNLKE 560

[Close]

BLAST of Cp4.1LG05g02490 vs. TAIR 10
Match: AT4G17380.1 (MUTS-like protein 4 )

HSP 1 Score: 815.1 bits (2104), Expect = 3.5e-236
Identity = 416/572 (72.73%), Postives = 486/572 (84.97%), Query Frame = 0


Query: 1   DELMSNEQLFFGLSQALRKFPKETGKPL----EIQKKVTNEVLGADNAKKSQSLISSIIL 60
           DELMSNEQLFFGLSQ LRKFPKET + L       KKVT  V+G +N +KSQ++ISSIIL
Sbjct: 233 DELMSNEQLFFGLSQVLRKFPKETDRVLCHFCFKPKKVTEAVIGFENTRKSQNMISSIIL 292

Query: 61  LKTSLEALPLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIA 120
           LKT+L+ALP+L+KVLK+AK FLLAN+Y SVCEN+++A+IR++IGEVID+DVLHARVPF+A
Sbjct: 293 LKTALDALPILAKVLKDAKCFLLANVYKSVCENDRYASIRKKIGEVIDDDVLHARVPFVA 352

Query: 121 RTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSI 180
           RTQQCFA+KAGIDG LDIARRTFCDTSEAIHNLA+KYREE+ LPNLKLPFNNRQGF+  I
Sbjct: 353 RTQQCFALKAGIDGFLDIARRTFCDTSEAIHNLASKYREEFNLPNLKLPFNNRQGFFFRI 412

Query: 181 PRKDVQGKLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEG 240
           P+K+VQGKLP+KF QV+KHG NI CS+LELAS      LNVRNKSAAGEC+IRTE CLE 
Sbjct: 413 PQKEVQGKLPNKFTQVVKHGKNIHCSSLELAS------LNVRNKSAAGECFIRTETCLEA 472

Query: 241 LVDAIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHP 300
           L+DAIRED+S LTLLAEVLCLLDM+VNSFAHTIS+KPVDRY+RP  T+SGP+AI+A RHP
Sbjct: 473 LMDAIREDISALTLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGRHP 532

Query: 301 ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 360
           ILESIHNDFV             +NSIF+SEA+NM++VMGPNMSGKSTYLQQ+CL+VILA
Sbjct: 533 ILESIHNDFV-------------SNSIFMSEATNMLVVMGPNMSGKSTYLQQVCLVVILA 592

Query: 361 QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDE 420
           QIGCYVPA+F+T+RVVDRIFTRMGT D+LESNSST +                SL+V+DE
Sbjct: 593 QIGCYVPARFATIRVVDRIFTRMGTMDNLESNSSTFMTEMRETAFIMQNVTNRSLIVMDE 652

Query: 421 LGRATSSSDGFAIAWSCCEYLLSLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNR 480
           LGRATSSSDG A+AWSCCEYLLSLKAYT+FATHMD L+EL TIYPNVK+LHF+VDIR+NR
Sbjct: 653 LGRATSSSDGLAMAWSCCEYLLSLKAYTVFATHMDSLAELATIYPNVKVLHFYVDIRDNR 712

Query: 481 LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEINYLQYHPI 540
           LDFKFQL+DG  HVPHYGLLLAEVAGLPS+VI+TA+ IT RI +KE +R+E+N  ++H I
Sbjct: 713 LDFKFQLRDGTLHVPHYGLLLAEVAGLPSTVIDTARIITKRITDKENKRIELNCGKHHEI 772

Query: 541 RMAYNVAQRLICLKHSSHDEDSIREALQNLKE 553
              Y VAQRLICLK+S   EDSIR+ALQNL E
Sbjct: 773 HRIYRVAQRLICLKYSRQTEDSIRQALQNLNE 785

[Close]

BLAST of Cp4.1LG05g02490 vs. TAIR 10
Match: AT3G18524.1 (MUTS homolog 2 )

HSP 1 Score: 127.1 bits (318), Expect = 4.4e-29
Identity = 119/408 (29.17%), Postives = 197/408 (48.28%), Query Frame = 0


Query: 144 EAIHNLANKYREEYKL---PNLKLPFNNRQGFYLSIPRKD---VQGKLPSKFIQVLKHGN 203
           + IH L  K   E  L     LKL    + G    I +K+   ++ KL ++FI +    +
Sbjct: 485 QQIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 544

Query: 204 NIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTL----LAE 263
            ++ +  +L        L  + +S   +       C + LVD + E V+  +     LA 
Sbjct: 545 GVKFTNTKLKK------LGDQYQSVVDD----YRSCQKELVDRVVETVTSFSEVFEDLAG 604

Query: 264 VLCLLDMMVNSFAHTISSKPVDRYTRPNFTES--GPMAIEAARHPILESIHNDFVVRLNS 323
           +L  +D+++ SFA   +S P   Y RP  T S  G + +E +RHP +E+   D+V     
Sbjct: 605 LLSEMDVLL-SFADLAASCPTP-YCRPEITSSDAGDIVLEGSRHPCVEA--QDWV----- 664

Query: 324 LTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAQFSTLRV 383
             I + C      +   S   IV GPNM GKST+++Q+ ++V++AQ+G +VP   +++ +
Sbjct: 665 NFIPNDCR----LMRGKSWFQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISI 724

Query: 384 VDRIFTRMGTEDSLESNSSTVL----------------SLVVVDELGRATSSSDGFAIAW 443
            D IF R+G  D      ST +                SL+++DELGR TS+ DGF +AW
Sbjct: 725 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAW 784

Query: 444 SCCEYLLSLK-AYTIFATHMDGLSELVTIYPNVK-----ILHFHV----DIRNNRLDFKF 503
           + CE+L+ +K A T+FATH   L+ L      V      + +FHV    D  + +L   +
Sbjct: 785 AICEHLVQVKRAPTLFATHFHELTALAQANSEVSGNTVGVANFHVSAHIDTESRKLTMLY 844

Query: 504 QLKDGIRHVPHYGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEIN 514
           +++ G      +G+ +AE A  P SV+  A+   + + +     M IN
Sbjct: 845 KVEPGACD-QSFGIHVAEFANFPESVVALAREKAAELEDFSPSSMIIN 868

[Close]

BLAST of Cp4.1LG05g02490 vs. TAIR 10
Match: AT4G25540.1 (homolog of DNA mismatch repair protein MSH3 )

HSP 1 Score: 121.3 bits (303), Expect = 2.4e-27
Identity = 89/277 (32.13%), Postives = 144/277 (51.99%), Query Frame = 0


Query: 267  HTISSKPVDR-YTRPNFT---ESGPMAIEAARHPILESIHNDFVVRLNSLTITDSCNANS 326
            H++S+   ++ Y RP F    E   + I++ RHP+LE+I  D  V             ++
Sbjct: 755  HSLSTLSRNKNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFV-----------PNDT 814

Query: 327  IFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAQFSTLRVVDRIFTRMGTE 386
            I  +E     I+ GPNM GKS Y++Q+ L+ I+AQ+G +VPA F+ L V+D +FTRMG  
Sbjct: 815  ILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGAS 874

Query: 387  DSLESNSSTVL----------------SLVVVDELGRATSSSDGFAIAWSCCEYLLSLK- 446
            DS++   ST L                SLV++DELGR TS+ DG AIA++  ++LL+ K 
Sbjct: 875  DSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEKR 934

Query: 447  AYTIFATHMDGLSELVTIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHV---------PH 506
               +F TH   ++E+   +P   +  +HV     + D      D + ++           
Sbjct: 935  CLVLFVTHYPEIAEISNGFPG-SVGTYHVSYLTLQKDKGSYDHDDVTYLYKLVRGLCSRS 994

Query: 507  YGLLLAEVAGLPSSVIETAKNITSRIMEKEERRMEIN 514
            +G  +A++A +P S I  A ++ ++ +E E R  E N
Sbjct: 995  FGFKVAQLAQIPPSCIRRAISMAAK-LEAEVRARERN 1018

[Close]

BLAST of Cp4.1LG05g02490 vs. TAIR 10
Match: AT3G24495.1 (MUTS homolog 7 )

HSP 1 Score: 114.0 bits (284), Expect = 3.8e-25
Identity = 104/346 (30.06%), Postives = 158/346 (45.66%), Query Frame = 0


Query: 184  KLPSKFIQVLKHGNNIRCSTLELASVSMFIILNVRNKSAAGECYIRTEICLEGLVD---- 243
            KLP   I V K G  +  S  E A  S F   N +N+    E      I +E  ++    
Sbjct: 704  KLP---ILVGKSGLELFLSQFEAAIDSDF--PNYQNQDVTDENAETLTILIELFIERATQ 763

Query: 244  --AIREDVSMLTLLAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGP-MAIEAARHP 303
               +   +S L +L        +   S A  +   P    T  N    GP + I+   HP
Sbjct: 764  WSEVIHTISCLDVLRSFAIAASLSAGSMARPVIF-PESEATDQNQKTKGPILKIQGLWHP 823

Query: 304  ILESIHNDFVVRLNSLTITDSCNANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILA 363
               +      V  N + + ++  ++    S     +++ GPNM GKST L+  CL VI A
Sbjct: 824  FAVAADGQLPVP-NDILLGEARRSSG---SIHPRSLLLTGPNMGGKSTLLRATCLAVIFA 883

Query: 364  QIGCYVPAQFSTLRVVDRIFTRMGTEDSLESNSSTVL----------------SLVVVDE 423
            Q+GCYVP +   + +VD IFTR+G  D + +  ST L                SLV++DE
Sbjct: 884  QLGCYVPCESCEISLVDTIFTRLGASDRIMTGESTFLVECTETASVLQNATQDSLVILDE 943

Query: 424  LGRATSSSDGFAIAWSCCEYLL-SLKAYTIFATHMDGLSELVTIYPNVKILHFHVDIRNN 483
            LGR TS+ DG+AIA+S   +L+  ++   +FATH   L++    +P V   H     ++ 
Sbjct: 944  LGRGTSTFDGYAIAYSVFRHLVEKVQCRMLFATHYHPLTKEFASHPRVTSKHMACAFKSR 1003

Query: 484  R----------LDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETA 496
                       L F ++L +G      YGL +A +AG+P+ V+ETA
Sbjct: 1004 SDYQPRGCDQDLVFLYRLTEG-ACPESYGLQVALMAGIPNQVVETA 1038

[Close]

BLAST of Cp4.1LG05g02490 vs. TAIR 10
Match: AT4G02070.1 (MUTS homolog 6 )

HSP 1 Score: 104.8 bits (260), Expect = 2.3e-22
Identity = 73/192 (38.02%), Postives = 103/192 (53.65%), Query Frame = 0


Query: 326  SEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAQFSTLRVVDRIFTRMGTEDSL 385
            +E ++ I++ GPNM GKST L+Q+CL VILAQIG  VPA+   +  VD+I  RMG +D +
Sbjct: 1073 AEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHI 1132

Query: 386  ESNSSTVL----------------SLVVVDELGRATSSSDGFAIAWSCCEYLL-SLKAYT 445
             +  ST L                SLVV+DELGR T++SDG AIA S  E+ +  ++   
Sbjct: 1133 MAGQSTFLTELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRG 1192

Query: 446  IFATHMDGLSELVTIYPNVKILHFHVDIRN-----NRLDFKFQLKDGIRHVPHYGLLLAE 496
             F+TH   LS      P V + H    I         + F ++L  G      YG+ +A 
Sbjct: 1193 FFSTHYHRLSVDYQTNPKVSLCHMACQIGEGIGGVEEVTFLYRLTPG-ACPKSYGVNVAR 1252

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g02490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JP48	4.9e-235	72.73	DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana OX=3702 GN=MSH4 PE=2 SV...	[more]
O15457	1.2e-79	34.32	MutS protein homolog 4 OS=Homo sapiens OX=9606 GN=MSH4 PE=1 SV=2	[more]
Q99MT2	1.0e-75	33.45	MutS protein homolog 4 OS=Mus musculus OX=10090 GN=Msh4 PE=2 SV=1	[more]
A5CDU2	1.2e-47	30.64	DNA mismatch repair protein MutS OS=Orientia tsutsugamushi (strain Boryong) OX=3...	[more]
A7HMG4	1.3e-46	29.68	DNA mismatch repair protein MutS OS=Fervidobacterium nodosum (strain ATCC 35602 ...	[more]

BLAST of Cp4.1LG05g02490 vs. NCBI nr


Match Name	Identity	Description
XP_023521478.1	91.96	DNA mismatch repair protein MSH4-like [Cucurbita pepo subsp. pepo] >XP_023532701...	[more]
XP_022996171.1	91.61	DNA mismatch repair protein MSH4 [Cucurbita maxima]	[more]
XP_022957703.1	91.08	DNA mismatch repair protein MSH4 [Cucurbita moschata]	[more]
KAG7036113.1	92.27	DNA mismatch repair protein MSH4, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KGN49752.2	86.54	hypothetical protein Csa_000516 [Cucumis sativus]	[more]

BLAST of Cp4.1LG05g02490 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1K3Y6	91.61	DNA mismatch repair protein MSH4 OS=Cucurbita maxima OX=3661 GN=LOC111491480 PE=...	[more]
A0A6J1H107	91.08	DNA mismatch repair protein MSH4 OS=Cucurbita moschata OX=3662 GN=LOC111459167 P...	[more]
A0A5A7TER1	86.89	DNA mismatch repair protein MSH4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3ATN6	86.89	DNA mismatch repair protein MSH4 OS=Cucumis melo OX=3656 GN=LOC103482597 PE=4 SV...	[more]
A0A0A0KRC1	85.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165160 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g02490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17380.1	3.5e-236	72.73	MUTS-like protein 4	[more]
AT3G18524.1	4.4e-29	29.17	MUTS homolog 2	[more]
AT4G25540.1	2.4e-27	32.13	homolog of DNA mismatch repair protein MSH3	[more]
AT3G24495.1	3.8e-25	30.06	MUTS homolog 7	[more]
AT4G02070.1	2.3e-22	38.02	MUTS homolog 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000432	DNA mismatch repair protein MutS, C-terminal	SMART	SM00534	mutATP5	coord: 329..500 e-value: 6.8E-58 score: 208.3
IPR000432	DNA mismatch repair protein MutS, C-terminal	PFAM	PF00488	MutS_V	coord: 393..502 e-value: 1.7E-26 score: 93.4 coord: 332..392 e-value: 3.7E-23 score: 82.6
IPR007696	DNA mismatch repair protein MutS, core	SMART	SM00533	DNAend	coord: 4..301 e-value: 2.6E-4 score: 1.1
IPR007861	DNA mismatch repair protein MutS, clamp	PFAM	PF05190	MutS_IV	coord: 127..208 e-value: 4.2E-13 score: 49.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 393..526 e-value: 2.1E-28 score: 101.2 coord: 277..392 e-value: 1.3E-38 score: 134.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 277..501
None	No IPR available	GENE3D	1.10.1420.10		coord: 95..234 e-value: 1.9E-16 score: 62.0
None	No IPR available	PANTHER	PTHR11361:SF21	MUTS PROTEIN HOMOLOG 4	coord: 1..551
IPR045076	DNA mismatch repair MutS family	PANTHER	PTHR11361	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER	coord: 1..551
IPR036187	DNA mismatch repair protein MutS, core domain superfamily	SUPERFAMILY	48334	DNA repair protein MutS, domain III	coord: 48..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g02490.1	Cp4.1LG05g02490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007129	homologous chromosome pairing at meiosis
biological_process	GO:0010777	meiotic mismatch repair involved in reciprocal meiotic recombination
biological_process	GO:0006857	oligopeptide transport
biological_process	GO:0000712	resolution of meiotic recombination intermediates
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006298	mismatch repair
cellular_component	GO:0043073	germ cell nucleus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009705	plant-type vacuole membrane
cellular_component	GO:0000795	synaptonemal complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0030983	mismatched DNA binding
molecular_function	GO:0022857	transmembrane transporter activity