Cp4.1LG05g01620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g01620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	F-box/kelch-repeat protein SKIP30-like
Location	Cp4.1LG05: 97456 .. 98493 (-)
RNA-Seq Expression	Cp4.1LG05g01620
Synteny	Cp4.1LG05g01620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAGTTGATTGACCGCCTCCCAGACGCGGTTGCCCTTAGGTGCCTTGCACGTGTGCCCTTCCACCTCTATCCAAAGTTGGAGCTTGTTTCTCACTCCTGGCAAGCTGCCATTCACAGTGCTGAACTATACAGAGTCCGACAGGAGATTGGATCATCAGAAGATCTATTATGCGTATGTGCATTCGAACCTGAGAATCTATGGCAGCTCTATGATCCCCTCGGAGACCTTTGGATGACAATTCCTGTATTACCATCGAAAATTAGGCATCTTGCACGCTTTGGTGCTGTGTCCACTGCTGGAAAGTTGTTTGTGCTTGGTGGTGGCAGTGATTCTGTTGATCCGGTAACCGGAGATCAAGATAGGAACTTTGCCACCAATGAGGTGTGGTCTTATGATCCTGTAATACGCCGGTGGTCTCAATGTGCATCAATGCTTGTACCCCGTGCCATGTTTGCATGCTGTGTTTTGGATGGAAAGATTGTTGTTGCAGGTGGTTTTACTAGCTGCAGAAAATCAATTTCTCAGGCAGAAATGTACGATCCTGATAAAGATGCTTGGATTCCTCTGCCTGACCTACACCACACTCACCATTCTGCTTGCACAGGGGTTGTGATTGGAGGGAAGTTGCACGTCCTGCACAAGGGATTATCAACTGTGCAAATTTTCGAGAATACGCGGCCTGGATGGAGAGTTGAAGATTATGGTTGGCTTCAAGGTCCAATGACCGTTGTCCGGGGTTCACTCTATGTGATGAGCCATGGACATATTTTCAAGCACGATGGAGAAGCTAAGAAGGTTGTTATTTCAGCATCTGAATTTCGCCAACGAATTGGGTTTGCGATGATGAGTTTGAGAGATGAAATTTACGTGATTGGAGGAGATATCGGTCCCGACCGTTTGAATTGGGACGTCAAGCCAACATCTGATGTTGACATATTGACAACAGGAGGTGAGAGGCCAACATGGCGACAGGCAACATCAATGACCAGATGCCATGGGGCTATTCGGGGATGTGCTCAGTTGAGAATTTAG

mRNA sequence

ATGTCTGAGTTGATTGACCGCCTCCCAGACGCGGTTGCCCTTAGGTGCCTTGCACGTGTGCCCTTCCACCTCTATCCAAAGTTGGAGCTTGTTTCTCACTCCTGGCAAGCTGCCATTCACAGTGCTGAACTATACAGAGTCCGACAGGAGATTGGATCATCAGAAGATCTATTATGCGTATGTGCATTCGAACCTGAGAATCTATGGCAGCTCTATGATCCCCTCGGAGACCTTTGGATGACAATTCCTGTATTACCATCGAAAATTAGGCATCTTGCACGCTTTGGTGCTGTGTCCACTGCTGGAAAGTTGTTTGTGCTTGGTGGTGGCAGTGATTCTGTTGATCCGGTAACCGGAGATCAAGATAGGAACTTTGCCACCAATGAGGTGTGGTCTTATGATCCTGTAATACGCCGGTGGTCTCAATGTGCATCAATGCTTGTACCCCGTGCCATGTTTGCATGCTGTGTTTTGGATGGAAAGATTGTTGTTGCAGGTGGTTTTACTAGCTGCAGAAAATCAATTTCTCAGGCAGAAATGTACGATCCTGATAAAGATGCTTGGATTCCTCTGCCTGACCTACACCACACTCACCATTCTGCTTGCACAGGGGTTGTGATTGGAGGGAAGTTGCACGTCCTGCACAAGGGATTATCAACTGTGCAAATTTTCGAGAATACGCGGCCTGGATGGAGAGTTGAAGATTATGGTTGGCTTCAAGGTCCAATGACCGTTGTCCGGGGTTCACTCTATGTGATGAGCCATGGACATATTTTCAAGCACGATGGAGAAGCTAAGAAGGTTGTTATTTCAGCATCTGAATTTCGCCAACGAATTGGGTTTGCGATGATGAGTTTGAGAGATGAAATTTACGTGATTGGAGGAGATATCGGTCCCGACCGTTTGAATTGGGACGTCAAGCCAACATCTGATGTTGACATATTGACAACAGGAGGTGAGAGGCCAACATGGCGACAGGCAACATCAATGACCAGATGCCATGGGGCTATTCGGGGATGTGCTCAGTTGAGAATTTAG

Coding sequence (CDS)

ATGTCTGAGTTGATTGACCGCCTCCCAGACGCGGTTGCCCTTAGGTGCCTTGCACGTGTGCCCTTCCACCTCTATCCAAAGTTGGAGCTTGTTTCTCACTCCTGGCAAGCTGCCATTCACAGTGCTGAACTATACAGAGTCCGACAGGAGATTGGATCATCAGAAGATCTATTATGCGTATGTGCATTCGAACCTGAGAATCTATGGCAGCTCTATGATCCCCTCGGAGACCTTTGGATGACAATTCCTGTATTACCATCGAAAATTAGGCATCTTGCACGCTTTGGTGCTGTGTCCACTGCTGGAAAGTTGTTTGTGCTTGGTGGTGGCAGTGATTCTGTTGATCCGGTAACCGGAGATCAAGATAGGAACTTTGCCACCAATGAGGTGTGGTCTTATGATCCTGTAATACGCCGGTGGTCTCAATGTGCATCAATGCTTGTACCCCGTGCCATGTTTGCATGCTGTGTTTTGGATGGAAAGATTGTTGTTGCAGGTGGTTTTACTAGCTGCAGAAAATCAATTTCTCAGGCAGAAATGTACGATCCTGATAAAGATGCTTGGATTCCTCTGCCTGACCTACACCACACTCACCATTCTGCTTGCACAGGGGTTGTGATTGGAGGGAAGTTGCACGTCCTGCACAAGGGATTATCAACTGTGCAAATTTTCGAGAATACGCGGCCTGGATGGAGAGTTGAAGATTATGGTTGGCTTCAAGGTCCAATGACCGTTGTCCGGGGTTCACTCTATGTGATGAGCCATGGACATATTTTCAAGCACGATGGAGAAGCTAAGAAGGTTGTTATTTCAGCATCTGAATTTCGCCAACGAATTGGGTTTGCGATGATGAGTTTGAGAGATGAAATTTACGTGATTGGAGGAGATATCGGTCCCGACCGTTTGAATTGGGACGTCAAGCCAACATCTGATGTTGACATATTGACAACAGGAGGTGAGAGGCCAACATGGCGACAGGCAACATCAATGACCAGATGCCATGGGGCTATTCGGGGATGTGCTCAGTTGAGAATTTAG

Protein sequence

MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGDQDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEMYDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQGPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPDRLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI

Homology

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BLAST of Cp4.1LG05g01620 vs. ExPASy Swiss-Prot
Match: Q9M1W7 (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1 SV=2)

HSP 1 Score: 517.7 bits (1332), Expect = 1.0e-145
Identity = 236/345 (68.41%), Postives = 280/345 (81.16%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MS L+D +P+AVALRCLA VP HL+P LELVS SW+AAI S EL+RVR+E+ SSE LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAF+PEN+WQ+Y P  D W+T+P+LPS+IRHLA FGAV+TAG LFVLGGGSD+V PVTGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
            D  FAT++VWSYD V R+W+  ASMLVPRAMFACCVL GKIVVAGGFT+CRKSIS AEM
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDP+ D W  +PDLH TH+SAC+G+V+ GK+HVLHKGLSTVQ+ E+ + GW V+DYGW Q
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV   LYVMSHG +FK +G+  K+V SASEF++RIG AM SL DE+ ++GG IGPD
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 307

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 346
           RLNWD+KP SDVD LT G +RP WR    MTRC G I GC QL I
Sbjct: 308 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]

BLAST of Cp4.1LG05g01620 vs. ExPASy Swiss-Prot
Match: Q0WW40 (F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g16250 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.9e-27
Identity = 102/377 (27.06%), Postives = 159/377 (42.18%), Query Frame = 0


Query: 4   LIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCAF 63
           +I  LPD +ALRC+A++    +  LE VS  W+  +  A+    +   G S   L V   
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 64  EPENLWQLYDPLGDLWMTIPVLPSKIR--HLARFGAVSTAGKLFVLGG-GSDSVDPVTGD 123
             +N W  YDP  D W  +P   +     H + F  V  +  L V+GG  + SV   +  
Sbjct: 68  RSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVS--SFP 127

Query: 124 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFT-SCRKSISQAE 183
             +   T +V  +DP  ++W   ASM  PR  FAC  + GK+ VAGG   +  + I  AE
Sbjct: 128 HQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAE 187

Query: 184 MYDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGL-----STVQIFENTRPGWRVE 243
           +YDP  D W  LP +       C+G+   G  HVL   +     ++ ++F      W   
Sbjct: 188 VYDPVADRWEELPAMPRPQMD-CSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMTWSTV 247

Query: 244 DYGW-----LQGPMTVVRGS-LYVM-------------SHGHIFKHDGEAKKVVISASEF 303
           +  W     +Q  + V++   +Y +               G  +        V+ +    
Sbjct: 248 EDVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLPNHPRE 307

Query: 304 RQRIGFAMMSLRDEIYVIGGDIGPDRLNWDVKPTSDVDI-------LTTGGERP-TWRQA 344
            +  G+   +LR+E+YVIGG +    L W+       DI       +    +RP  WR+ 
Sbjct: 308 LEAFGYGFAALRNELYVIGGKV----LKWEESGAGRFDIVRLPVVRVCNPLDRPLNWRET 367

[Close]

BLAST of Cp4.1LG05g01620 vs. ExPASy Swiss-Prot
Match: Q9LM55 (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g22040 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.4e-22
Identity = 68/223 (30.49%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 4   LIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVC-- 63
           LI  LPD ++++ LAR+P   Y  + LVS  W++A+ ++E+Y +R+E+G +E+ L V   
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 64  AFEPENLWQLYDPLGDLWMTIPVLP----------------SKIRHLARFGAV------- 123
             E + LW   DP+   W  +P +P                + I      GA+       
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162

Query: 124 -STAGKLFVLGGGSDSVDP---VTGDQDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFA 183
             ++ ++   G    +VD    V G   R+   + VW +DP++  WS+ +SML  RA   
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSK 222

Query: 184 CCVLDGKIVVAGGFTSCRKSIS---QAEMYDPDKDAWIPLPDL 195
             VL+ K+ V GG    R  +S    AE+YDP  DAW  +P +
Sbjct: 223 TGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSM 265

[Close]

BLAST of Cp4.1LG05g01620 vs. ExPASy Swiss-Prot
Match: Q93W93 (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.9e-22
Identity = 77/259 (29.73%), Postives = 116/259 (44.79%), Query Frame = 0


Query: 4   LIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCAF 63
           L+  LPD +A+ CL RVP   + KL LV   W         Y  R+ +G SE+ + V   
Sbjct: 78  LLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKR 137

Query: 64  EPEN--LWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGDQ 123
           + +    W  +DP+  LW  +P +P +      FG    +G    L GG    DP+ G  
Sbjct: 138 DRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGK---DPLRGSM 197

Query: 124 DRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGG-FTSCRKSISQAEM 183
            R      V  Y+    +W +   ML  R  F CCV++  + VAGG     ++++  AE+
Sbjct: 198 RR------VIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAEV 257

Query: 184 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQI-----FENTRPGWRVED 243
           YDP+K+ W  + D+  T      GVV   K  +  KGL + Q+     ++     W    
Sbjct: 258 YDPNKNRWSFIADM-STAMVPLIGVVYDKKWFL--KGLGSHQLVMSEAYDPEVNSWSPVS 317

Query: 244 YGWLQG---PMTVVRGSLY 252
            G + G   P T + G LY
Sbjct: 318 DGMVAGWRNPCTSLNGRLY 324

[Close]

BLAST of Cp4.1LG05g01620 vs. ExPASy Swiss-Prot
Match: Q9CAG8 (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.6e-21
Identity = 68/214 (31.78%), Postives = 100/214 (46.73%), Query Frame = 0


Query: 4   LIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCAF 63
           LI  LPD VA +CLA VP   +P +  V   W+  + S E   VR+  G  E+ L V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  E---PENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 123
                +N W++ D LG    ++P +P   +    F  V   GKL V+ G       + G 
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAG----CCMINGS 158

Query: 124 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 183
                A+ +V+ YD  +  WS+ A + V R  FAC  ++G + V GG     +S+S AE+
Sbjct: 159 L---VASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEV 218

Query: 184 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVL 215
           YDP+   W  +  L       C      GKL+V+
Sbjct: 219 YDPETCTWTFIESLRRPRW-GCFASAFNGKLYVM 242

[Close]

BLAST of Cp4.1LG05g01620 vs. NCBI nr
Match: XP_023534715.1 (F-box/kelch-repeat protein SKIP30-like [Cucurbita pepo subsp. pepo] >XP_023534716.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita pepo subsp. pepo] >XP_023534718.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita pepo subsp. pepo] >XP_023534719.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 723 bits (1865), Expect = 2.39e-263
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD
Sbjct: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345
           RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Cp4.1LG05g01620 vs. NCBI nr
Match: XP_022931065.1 (F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata] >XP_022931066.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata] >XP_022931067.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata])

HSP 1 Score: 717 bits (1850), Expect = 4.63e-261
Identity = 342/345 (99.13%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAFEPENLWQLYDPL DLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDP+TGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPMTVV+GSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345
           RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Cp4.1LG05g01620 vs. NCBI nr
Match: KAG6606420.1 (F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036358.1 F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 715 bits (1845), Expect = 2.68e-260
Identity = 341/345 (98.84%), Postives = 343/345 (99.42%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAFEPENLWQLYDPL DLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDP+TGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDG IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGNIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPMTVV+GSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345
           RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Cp4.1LG05g01620 vs. NCBI nr
Match: XP_022996118.1 (F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima] >XP_022996119.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima] >XP_022996120.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima] >XP_022996121.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima])

HSP 1 Score: 713 bits (1841), Expect = 1.09e-259
Identity = 339/345 (98.26%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELIDRLPDAVALRCLARVPFHLYP+LELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAFEPENLWQLYDPL DLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDP+TGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPMTVV+GSLYVMSHGHIFKHDGEAKKV+ISASEFRQRIGFAMMSLRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345
           RLNWDVKPTSDVDILTTGGERPTWR+ATSMTRCHGAIRGCAQLRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Cp4.1LG05g01620 vs. NCBI nr
Match: XP_023511586.1 (F-box/kelch-repeat protein SKIP30 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 646 bits (1667), Expect = 3.65e-233
Identity = 307/345 (88.99%), Postives = 324/345 (93.91%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLYPKLELVS SW AAI S+EL+RVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAFEPENLWQLYDPL DLW+TIPVLPS+IRHLA FGAVSTAGKLFVLGGGSD VDP+TGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP+I RW Q ASMLVPRAMFACCVL G+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPDKD WIPLPDLHHTH+SACTGVVIGGKLHVLHKGLSTVQIF++ +  WRVEDYGWLQ
Sbjct: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV+GSLYVMSHGHIFKHDGE +KVVISASEFRQRIGFAM+ LRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345
           RLNWD+KPTSDVDILTTGGERPTWR A SMT+C GAIRGCA+LRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Cp4.1LG05g01620 vs. ExPASy TrEMBL
Match: A0A6J1ESG5 (F-box/kelch-repeat protein SKIP30-like OS=Cucurbita moschata OX=3662 GN=LOC111437365 PE=4 SV=1)

HSP 1 Score: 717 bits (1850), Expect = 2.24e-261
Identity = 342/345 (99.13%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAFEPENLWQLYDPL DLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDP+TGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPMTVV+GSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345
           RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Cp4.1LG05g01620 vs. ExPASy TrEMBL
Match: A0A6J1K7U2 (F-box/kelch-repeat protein SKIP30-like OS=Cucurbita maxima OX=3661 GN=LOC111491436 PE=4 SV=1)

HSP 1 Score: 713 bits (1841), Expect = 5.28e-260
Identity = 339/345 (98.26%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELIDRLPDAVALRCLARVPFHLYP+LELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAFEPENLWQLYDPL DLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDP+TGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPMTVV+GSLYVMSHGHIFKHDGEAKKV+ISASEFRQRIGFAMMSLRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345
           RLNWDVKPTSDVDILTTGGERPTWR+ATSMTRCHGAIRGCAQLRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Cp4.1LG05g01620 vs. ExPASy TrEMBL
Match: A0A6J1HWH7 (F-box/kelch-repeat protein SKIP30 OS=Cucurbita maxima OX=3661 GN=LOC111466917 PE=4 SV=1)

HSP 1 Score: 643 bits (1658), Expect = 4.16e-232
Identity = 305/345 (88.41%), Postives = 323/345 (93.62%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLYPKLELVS SW AAI S+EL+RVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAFEPENLWQLYDPL DLW+TIPVLPS+IRHLA FGAVSTAGKLFVLGGGSD VDP+TGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP+I RW Q ASMLVPRAMFACCVL G+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPD+D WIPLPDLHHTH+SACTGVVIGGKLHVLHKGLSTVQI ++ +  WRVEDYGWLQ
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV+GSLYVMSHGHIFKHDGE +KVVISASEFRQRIGFAM+ LRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345
           RLNWD+KPTSDVDILTTGGERPTWR A SMT+C GAIRGCA+LRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Cp4.1LG05g01620 vs. ExPASy TrEMBL
Match: A0A6J1HGE3 (F-box/kelch-repeat protein SKIP30 OS=Cucurbita moschata OX=3662 GN=LOC111464058 PE=4 SV=1)

HSP 1 Score: 643 bits (1658), Expect = 4.16e-232
Identity = 305/345 (88.41%), Postives = 323/345 (93.62%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLYPKLELVS SW AAI S+EL+RVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAFEPENLWQLYDPL DLW+TIPVLPS+IRHLA FGAVSTAGKLFVLGGGSD VDP+TGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP+I RW Q ASMLVPRAMFACCVL G+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPD+D WIPLPDLHHTH+SACTGVVIGGKLHVLHKGLSTVQI ++ +  WRVEDYGWLQ
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV+GSLYVMSHGHIFKHDGE +KVVISASEFRQRIGFAM+ LRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345
           RLNWD+KPTSDVDILTTGGERPTWR A SMT+C GAIRGCA+LRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Cp4.1LG05g01620 vs. ExPASy TrEMBL
Match: A0A6J1CW43 (F-box/kelch-repeat protein SKIP30 OS=Momordica charantia OX=3673 GN=LOC111015334 PE=4 SV=1)

HSP 1 Score: 635 bits (1637), Expect = 6.59e-229
Identity = 301/345 (87.25%), Postives = 319/345 (92.46%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLY  LELVSHSW+AAI SAEL+RVR+EIGSSE+LLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAFEPENLWQLYDPL DLW+T+PV PSKIRHLA FGAVSTAGKLFV+GGGSD+VDP+TGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPVI +WSQ A MLV RAMFACCVL GKIVVAGGFTSCRKSISQAE+
Sbjct: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPDKD WIPLPDLHHTH+SACTG VIGGKLHVLHKGLSTVQIF+N RPGWRVEDYGWLQ
Sbjct: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV+ SLYVMSHG IFKHD E +KVVISASEFRQRIGFAM+ LRDEIYVIGGDIGPD
Sbjct: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345
           RLNWD+KPTSDVDILTT GERPTWR A  MTRC GAIRGCA+LRI
Sbjct: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 345

[Close]

BLAST of Cp4.1LG05g01620 vs. TAIR 10
Match: AT3G63220.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 517.7 bits (1332), Expect = 7.2e-147
Identity = 236/345 (68.41%), Postives = 280/345 (81.16%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MS L+D +P+AVALRCLA VP HL+P LELVS SW+AAI S EL+RVR+E+ SSE LLCV
Sbjct: 1   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 60

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAF+PEN+WQ+Y P  D W+T+P+LPS+IRHLA FGAV+TAG LFVLGGGSD+V PVTGD
Sbjct: 61  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
            D  FAT++VWSYD V R+W+  ASMLVPRAMFACCVL GKIVVAGGFT+CRKSIS AEM
Sbjct: 121 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDP+ D W  +PDLH TH+SAC+G+V+ GK+HVLHKGLSTVQ+ E+ + GW V+DYGW Q
Sbjct: 181 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 240

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV   LYVMSHG +FK +G+  K+V SASEF++RIG AM SL DE+ ++GG IGPD
Sbjct: 241 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 346
           RLNWD+KP SDVD LT G +RP WR    MTRC G I GC QL I
Sbjct: 301 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 345

[Close]

BLAST of Cp4.1LG05g01620 vs. TAIR 10
Match: AT3G63220.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 517.7 bits (1332), Expect = 7.2e-147
Identity = 236/345 (68.41%), Postives = 280/345 (81.16%), Query Frame = 0


Query: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MS L+D +P+AVALRCLA VP HL+P LELVS SW+AAI S EL+RVR+E+ SSE LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CAFEPENLWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGD 120
           CAF+PEN+WQ+Y P  D W+T+P+LPS+IRHLA FGAV+TAG LFVLGGGSD+V PVTGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
            D  FAT++VWSYD V R+W+  ASMLVPRAMFACCVL GKIVVAGGFT+CRKSIS AEM
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDP+ D W  +PDLH TH+SAC+G+V+ GK+HVLHKGLSTVQ+ E+ + GW V+DYGW Q
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 241 GPMTVVRGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV   LYVMSHG +FK +G+  K+V SASEF++RIG AM SL DE+ ++GG IGPD
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 307

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 346
           RLNWD+KP SDVD LT G +RP WR    MTRC G I GC QL I
Sbjct: 308 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]

BLAST of Cp4.1LG05g01620 vs. TAIR 10
Match: AT1G16250.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-28
Identity = 102/377 (27.06%), Postives = 159/377 (42.18%), Query Frame = 0


Query: 4   LIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCAF 63
           +I  LPD +ALRC+A++    +  LE VS  W+  +  A+    +   G S   L V   
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 64  EPENLWQLYDPLGDLWMTIPVLPSKIR--HLARFGAVSTAGKLFVLGG-GSDSVDPVTGD 123
             +N W  YDP  D W  +P   +     H + F  V  +  L V+GG  + SV   +  
Sbjct: 68  RSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVS--SFP 127

Query: 124 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFT-SCRKSISQAE 183
             +   T +V  +DP  ++W   ASM  PR  FAC  + GK+ VAGG   +  + I  AE
Sbjct: 128 HQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAE 187

Query: 184 MYDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGL-----STVQIFENTRPGWRVE 243
           +YDP  D W  LP +       C+G+   G  HVL   +     ++ ++F      W   
Sbjct: 188 VYDPVADRWEELPAMPRPQMD-CSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMTWSTV 247

Query: 244 DYGW-----LQGPMTVVRGS-LYVM-------------SHGHIFKHDGEAKKVVISASEF 303
           +  W     +Q  + V++   +Y +               G  +        V+ +    
Sbjct: 248 EDVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLPNHPRE 307

Query: 304 RQRIGFAMMSLRDEIYVIGGDIGPDRLNWDVKPTSDVDI-------LTTGGERP-TWRQA 344
            +  G+   +LR+E+YVIGG +    L W+       DI       +    +RP  WR+ 
Sbjct: 308 LEAFGYGFAALRNELYVIGGKV----LKWEESGAGRFDIVRLPVVRVCNPLDRPLNWRET 367

[Close]

BLAST of Cp4.1LG05g01620 vs. TAIR 10
Match: AT1G22040.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-23
Identity = 68/223 (30.49%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 4   LIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVC-- 63
           LI  LPD ++++ LAR+P   Y  + LVS  W++A+ ++E+Y +R+E+G +E+ L V   
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 64  AFEPENLWQLYDPLGDLWMTIPVLP----------------SKIRHLARFGAV------- 123
             E + LW   DP+   W  +P +P                + I      GA+       
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162

Query: 124 -STAGKLFVLGGGSDSVDP---VTGDQDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFA 183
             ++ ++   G    +VD    V G   R+   + VW +DP++  WS+ +SML  RA   
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSK 222

Query: 184 CCVLDGKIVVAGGFTSCRKSIS---QAEMYDPDKDAWIPLPDL 195
             VL+ K+ V GG    R  +S    AE+YDP  DAW  +P +
Sbjct: 223 TGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSM 265

[Close]

BLAST of Cp4.1LG05g01620 vs. TAIR 10
Match: AT1G55270.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-23
Identity = 77/259 (29.73%), Postives = 116/259 (44.79%), Query Frame = 0


Query: 4   LIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCAF 63
           L+  LPD +A+ CL RVP   + KL LV   W         Y  R+ +G SE+ + V   
Sbjct: 78  LLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKR 137

Query: 64  EPEN--LWQLYDPLGDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPVTGDQ 123
           + +    W  +DP+  LW  +P +P +      FG    +G    L GG    DP+ G  
Sbjct: 138 DRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGK---DPLRGSM 197

Query: 124 DRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGG-FTSCRKSISQAEM 183
            R      V  Y+    +W +   ML  R  F CCV++  + VAGG     ++++  AE+
Sbjct: 198 RR------VIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAEV 257

Query: 184 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQI-----FENTRPGWRVED 243
           YDP+K+ W  + D+  T      GVV   K  +  KGL + Q+     ++     W    
Sbjct: 258 YDPNKNRWSFIADM-STAMVPLIGVVYDKKWFL--KGLGSHQLVMSEAYDPEVNSWSPVS 317

Query: 244 YGWLQG---PMTVVRGSLY 252
            G + G   P T + G LY
Sbjct: 318 DGMVAGWRNPCTSLNGRLY 324

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g01620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1W7	1.0e-145	68.41	F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1...	[more]
Q0WW40	1.9e-27	27.06	F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g1625...	[more]
Q9LM55	1.4e-22	30.49	F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g2204...	[more]
Q93W93	1.9e-22	29.73	F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g5527...	[more]
Q9CAG8	1.6e-21	31.78	F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g6748...	[more]

BLAST of Cp4.1LG05g01620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534715.1	2.39e-263	100.00	F-box/kelch-repeat protein SKIP30-like [Cucurbita pepo subsp. pepo] >XP_02353471...	[more]
XP_022931065.1	4.63e-261	99.13	F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata] >XP_022931066.1 F-bo...	[more]
KAG6606420.1	2.68e-260	98.84	F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022996118.1	1.09e-259	98.26	F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima] >XP_022996119.1 F-box/...	[more]
XP_023511586.1	3.65e-233	88.99	F-box/kelch-repeat protein SKIP30 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG05g01620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESG5	2.24e-261	99.13	F-box/kelch-repeat protein SKIP30-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1K7U2	5.28e-260	98.26	F-box/kelch-repeat protein SKIP30-like OS=Cucurbita maxima OX=3661 GN=LOC1114914...	[more]
A0A6J1HWH7	4.16e-232	88.41	F-box/kelch-repeat protein SKIP30 OS=Cucurbita maxima OX=3661 GN=LOC111466917 PE...	[more]
A0A6J1HGE3	4.16e-232	88.41	F-box/kelch-repeat protein SKIP30 OS=Cucurbita moschata OX=3662 GN=LOC111464058 ...	[more]
A0A6J1CW43	6.59e-229	87.25	F-box/kelch-repeat protein SKIP30 OS=Momordica charantia OX=3673 GN=LOC111015334...	[more]

BLAST of Cp4.1LG05g01620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63220.1	7.2e-147	68.41	Galactose oxidase/kelch repeat superfamily protein	[more]
AT3G63220.2	7.2e-147	68.41	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G16250.1	1.4e-28	27.06	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G22040.1	1.0e-23	30.49	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G55270.1	1.3e-23	29.73	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 161..209 e-value: 4.0E-6 score: 36.3 coord: 103..160 e-value: 1.4E-4 score: 31.2
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 278..330 e-value: 9.4E-5 score: 21.9 coord: 93..146 e-value: 7.5E-9 score: 35.0 coord: 149..194 e-value: 1.0E-11 score: 44.2
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 61..341 e-value: 1.3E-35 score: 124.8
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 61..328
None	No IPR available	PANTHER	PTHR24414	F-BOX/KELCH-REPEAT PROTEIN SKIP4	coord: 2..345
None	No IPR available	PANTHER	PTHR24414:SF40	F-BOX/KELCH-REPEAT PROTEIN SKIP30	coord: 2..345

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g01620.1	Cp4.1LG05g01620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding