Cp4.1LG05g01520 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG05g01520
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG05: 30807 .. 31193 (-)
RNA-Seq ExpressionCp4.1LG05g01520
SyntenyCp4.1LG05g01520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGGAACTCCAAATCCTCCAAGCGCAACCCCGTGTGCGAGAAGCTTCTCAAGGCTCTTGGCTTGTATCCTAGAATCCTCAAATTTGGCCCTCCGCCAAACCGCCAGGAAGAACCCAAACCGGCTGCCCTGGCTCACTCGTATTCTCTGCAAATTCAGGATGATGAAGTTGAGAAAGAACAAAAGCCCAGCGAAGATGTAAACGACGTGTTTAGCGATTACATCAGTCGGGCTAAACGTAGGCTGGGAAGCATATCAAGCAAGCGACATGATTGGAGTAGCAGAGGAAAGGAGAACGTCAAAGAAGATAATCCCTTTTCGGACTATATCGTTCGAGCTAGGAATAAGCTGAAGGCTACGTCCTCAAGTGTAAAGCGAGAATAG

mRNA sequence

ATGGGAAGGAACTCCAAATCCTCCAAGCGCAACCCCGTGTGCGAGAAGCTTCTCAAGGCTCTTGGCTTGTATCCTAGAATCCTCAAATTTGGCCCTCCGCCAAACCGCCAGGAAGAACCCAAACCGGCTGCCCTGGCTCACTCGTATTCTCTGCAAATTCAGGATGATGAAGTTGAGAAAGAACAAAAGCCCAGCGAAGATGTAAACGACGTGTTTAGCGATTACATCAGTCGGGCTAAACGTAGGCTGGGAAGCATATCAAGCAAGCGACATGATTGGAGTAGCAGAGGAAAGGAGAACGTCAAAGAAGATAATCCCTTTTCGGACTATATCGTTCGAGCTAGGAATAAGCTGAAGGCTACGTCCTCAAGTGTAAAGCGAGAATAG

Coding sequence (CDS)

ATGGGAAGGAACTCCAAATCCTCCAAGCGCAACCCCGTGTGCGAGAAGCTTCTCAAGGCTCTTGGCTTGTATCCTAGAATCCTCAAATTTGGCCCTCCGCCAAACCGCCAGGAAGAACCCAAACCGGCTGCCCTGGCTCACTCGTATTCTCTGCAAATTCAGGATGATGAAGTTGAGAAAGAACAAAAGCCCAGCGAAGATGTAAACGACGTGTTTAGCGATTACATCAGTCGGGCTAAACGTAGGCTGGGAAGCATATCAAGCAAGCGACATGATTGGAGTAGCAGAGGAAAGGAGAACGTCAAAGAAGATAATCCCTTTTCGGACTATATCGTTCGAGCTAGGAATAAGCTGAAGGCTACGTCCTCAAGTGTAAAGCGAGAATAG

Protein sequence

MGRNSKSSKRNPVCEKLLKALGLYPRILKFGPPPNRQEEPKPAALAHSYSLQIQDDEVEKEQKPSEDVNDVFSDYISRAKRRLGSISSKRHDWSSRGKENVKEDNPFSDYIVRARNKLKATSSSVKRE
Homology
BLAST of Cp4.1LG05g01520 vs. NCBI nr
Match: KAG6606435.1 (hypothetical protein SDJN03_03752, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 247 bits (631), Expect = 1.95e-82
Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0

Query: 1   MGRNSKSSKRNPVCEKLLKALGLYPRILKFGPPPNRQEEPKPAALAHSYSLQIQDDEVEK 60
           MGRNSKSSKRNPVCEKLLKALGLYPRILKFGPPPNRQEEPKPAALAHSYSLQIQDDEVEK
Sbjct: 1   MGRNSKSSKRNPVCEKLLKALGLYPRILKFGPPPNRQEEPKPAALAHSYSLQIQDDEVEK 60

Query: 61  EQKPSEDVNDVFSDYISRAKRRLGSISSKRHDWSSRGKENVKEDNPFSDYIVRARNKLKA 120
           EQKPSEDVNDVFSDYISRAKRRLGSISSKRHDWSSRGKENVKEDN FSDYIVRARNKLKA
Sbjct: 61  EQKPSEDVNDVFSDYISRAKRRLGSISSKRHDWSSRGKENVKEDNRFSDYIVRARNKLKA 120

Query: 121 TSSSVKRE 128
           TSSSVKRE
Sbjct: 121 TSSSVKRE 128

BLAST of Cp4.1LG05g01520 vs. NCBI nr
Match: KAG6571440.1 (hypothetical protein SDJN03_28168, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 125 bits (315), Expect = 2.55e-34
Identity = 74/128 (57.81%), Postives = 92/128 (71.88%), Query Frame = 0

Query: 1   MGRNSKSSKRNPVCEKLLKALGLYPRILKFGPPPNRQEEPKPAALAHSYSLQIQD-DEVE 60
           MG+N+KSSKR+ VCE+ LKALG+ P        P R EEP    +     L I    ++E
Sbjct: 1   MGKNTKSSKRSSVCERFLKALGMCPS-------PTRHEEPLAPEMDKKQRLNINGAPQME 60

Query: 61  KEQKPSEDVNDVFSDYISRAKRRLGSISSKRHDWSSRGKENVKEDNPFSDYIVRARNKLK 120
           K+QK   + ND FSDYI+RAKRRLGSISSKRHD SS+GKEN+KED  F+DYI+RARN+L+
Sbjct: 61  KKQKL--EPNDAFSDYINRAKRRLGSISSKRHDPSSKGKENLKEDRRFTDYIIRARNRLR 119

Query: 121 ATSSSVKR 127
           ATSS+V R
Sbjct: 121 ATSSTVGR 119

BLAST of Cp4.1LG05g01520 vs. NCBI nr
Match: KAA0057288.1 (hypothetical protein E6C27_scaffold280G001290 [Cucumis melo var. makuwa] >TYK13444.1 hypothetical protein E5676_scaffold496G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 5.19e-22
Identity = 68/145 (46.90%), Postives = 84/145 (57.93%), Query Frame = 0

Query: 1   MGRNSKSSKRN-PVCEKLLKALGLY--PRILKFGPPPNRQEEPKPAALAHSYSLQIQDDE 60
           MGRN KSS  N P CEKLLKA G+   P+I K  P  +  E+        S  + +  + 
Sbjct: 1   MGRNPKSSTPNTPFCEKLLKAFGISHRPKINKLSPSTSHHEQQHQQQNNSSQHIYVHHEP 60

Query: 61  VEKEQKP------------SEDVNDVFSDYISRAKRRLGSISSKRH---DWSSRGKENV- 120
              E K              + VNDVFS+YI+RAKRRLG+I+SK+H   D S +GKEN  
Sbjct: 61  AIMEIKTHSSKSNKYGGGDEDSVNDVFSNYINRAKRRLGNIASKKHSNNDSSGKGKENSL 120

Query: 121 -KEDNPFSDYIVRARNKLKATSSSV 125
             ED  FSDYI RAR+KL+ATSSSV
Sbjct: 121 KAEDRRFSDYIARARDKLRATSSSV 145

BLAST of Cp4.1LG05g01520 vs. NCBI nr
Match: KGN47879.1 (hypothetical protein Csa_004306 [Cucumis sativus])

HSP 1 Score: 86.7 bits (213), Expect = 1.49e-18
Identity = 66/144 (45.83%), Postives = 82/144 (56.94%), Query Frame = 0

Query: 1   MGRNSKSSKRN-PVCEKLLKALGLY--PRILKFGPPPN--------RQEEPKPAALAHSY 60
           MG+NSKSS  N P CEKLLKA G+   P+I K     +        +Q         H  
Sbjct: 1   MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQRNSSQHIYVHHE 60

Query: 61  SLQIQDDEVEKEQK----PSEDVNDVFSDYISRAKRRLGSISSKRH--DWSSRGKEN--V 120
              ++     K  K      + VN  FS+YI+RAKRRL +++SK+H  D SSRGKEN   
Sbjct: 61  PAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLENMASKKHSNDSSSRGKENNLK 120

Query: 121 KEDNPFSDYIVRARNKLKATSSSV 125
            ED  FSDYIVRARNKL++TSSSV
Sbjct: 121 AEDRRFSDYIVRARNKLRSTSSSV 144

BLAST of Cp4.1LG05g01520 vs. NCBI nr
Match: PQM34950.1 (uncharacterized protein Pyn_31712 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 55.5 bits (132), Expect = 5.24e-06
Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query: 34  PNRQEEPKPAALA---HSYSLQIQDDEVEKE-QKPSE-DVNDVFSDYISRAKRRLGSISS 93
           P   E P   A+    H+++  ++  +V+ E +KP E D+ND FS+YI++AK ++ ++SS
Sbjct: 170 PKHSESPLKGAVGEALHNHNAAVKAPQVKNEGKKPGELDINDTFSEYINQAKIKIRTMSS 229

Query: 94  KR---HDWSSRGKENVKEDNPFSDYIVRARNKLKATSSSV 125
                 D  ++ KE+VK+   FSDYI RA+NK K+T S++
Sbjct: 230 NNISESDDDAKKKESVKDH--FSDYIHRAKNKFKSTPSNL 267

BLAST of Cp4.1LG05g01520 vs. ExPASy TrEMBL
Match: A0A5D3CQZ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00660 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.51e-22
Identity = 68/145 (46.90%), Postives = 84/145 (57.93%), Query Frame = 0

Query: 1   MGRNSKSSKRN-PVCEKLLKALGLY--PRILKFGPPPNRQEEPKPAALAHSYSLQIQDDE 60
           MGRN KSS  N P CEKLLKA G+   P+I K  P  +  E+        S  + +  + 
Sbjct: 1   MGRNPKSSTPNTPFCEKLLKAFGISHRPKINKLSPSTSHHEQQHQQQNNSSQHIYVHHEP 60

Query: 61  VEKEQKP------------SEDVNDVFSDYISRAKRRLGSISSKRH---DWSSRGKENV- 120
              E K              + VNDVFS+YI+RAKRRLG+I+SK+H   D S +GKEN  
Sbjct: 61  AIMEIKTHSSKSNKYGGGDEDSVNDVFSNYINRAKRRLGNIASKKHSNNDSSGKGKENSL 120

Query: 121 -KEDNPFSDYIVRARNKLKATSSSV 125
             ED  FSDYI RAR+KL+ATSSSV
Sbjct: 121 KAEDRRFSDYIARARDKLRATSSSV 145

BLAST of Cp4.1LG05g01520 vs. ExPASy TrEMBL
Match: A0A0A0KG94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409360 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 7.20e-19
Identity = 66/144 (45.83%), Postives = 82/144 (56.94%), Query Frame = 0

Query: 1   MGRNSKSSKRN-PVCEKLLKALGLY--PRILKFGPPPN--------RQEEPKPAALAHSY 60
           MG+NSKSS  N P CEKLLKA G+   P+I K     +        +Q         H  
Sbjct: 1   MGKNSKSSTPNTPFCEKLLKAFGMSHRPKINKLSSSISHHEHHHHQQQRNSSQHIYVHHE 60

Query: 61  SLQIQDDEVEKEQK----PSEDVNDVFSDYISRAKRRLGSISSKRH--DWSSRGKEN--V 120
              ++     K  K      + VN  FS+YI+RAKRRL +++SK+H  D SSRGKEN   
Sbjct: 61  PAVMEKTHSSKNNKYAGGDEDSVNAAFSNYINRAKRRLENMASKKHSNDSSSRGKENNLK 120

Query: 121 KEDNPFSDYIVRARNKLKATSSSV 125
            ED  FSDYIVRARNKL++TSSSV
Sbjct: 121 AEDRRFSDYIVRARNKLRSTSSSV 144

BLAST of Cp4.1LG05g01520 vs. ExPASy TrEMBL
Match: A0A314UC87 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_31712 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.54e-06
Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query: 34  PNRQEEPKPAALA---HSYSLQIQDDEVEKE-QKPSE-DVNDVFSDYISRAKRRLGSISS 93
           P   E P   A+    H+++  ++  +V+ E +KP E D+ND FS+YI++AK ++ ++SS
Sbjct: 170 PKHSESPLKGAVGEALHNHNAAVKAPQVKNEGKKPGELDINDTFSEYINQAKIKIRTMSS 229

Query: 94  KR---HDWSSRGKENVKEDNPFSDYIVRARNKLKATSSSV 125
                 D  ++ KE+VK+   FSDYI RA+NK K+T S++
Sbjct: 230 NNISESDDDAKKKESVKDH--FSDYIHRAKNKFKSTPSNL 267

BLAST of Cp4.1LG05g01520 vs. ExPASy TrEMBL
Match: A0A6J5VR30 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS52131 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.36e-05
Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 0

Query: 34  PNRQEEPKPAALA---HSYSLQIQDDEVEKEQKPSE-------DVNDVFSDYISRAKRRL 93
           P   E P   A+    H+++  ++  E E  Q  +E       D+ND FS+YI +AK ++
Sbjct: 171 PKHSESPLKGAVGEAQHNHNAAVKVHEAEAPQVKNEGKKPGGPDINDTFSEYIKQAKIKI 230

Query: 94  GSISSKR---HDWSSRGKENVKEDNPFSDYIVRARNKLKATSSSV 125
            ++SS      D  ++ KE+VK+   FSDYI RA+NK K+T SS+
Sbjct: 231 RTMSSNNISESDDDAKKKESVKDH--FSDYIHRAKNKFKSTPSSL 273

BLAST of Cp4.1LG05g01520 vs. ExPASy TrEMBL
Match: A0A6P5RSE8 (uncharacterized protein LOC110748293 OS=Prunus avium OX=42229 GN=LOC110748293 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 8.27e-05
Identity = 36/105 (34.29%), Postives = 61/105 (58.10%), Query Frame = 0

Query: 34  PNRQEEPKPAALA---HSYSLQIQDDEVEKEQKPSE-------DVNDVFSDYISRAKRRL 93
           P   E P   A+    H+++  ++  E E  +  +E       D+ND FS+YI++AK ++
Sbjct: 170 PKHSESPLKGAVGEALHNHNAAVKVHEAEAPRVKNEGKKPGGLDINDTFSEYINQAKIKI 229

Query: 94  GSISSKR---HDWSSRGKENVKEDNPFSDYIVRARNKLKATSSSV 125
            ++SS +    D  ++ KE+VK+   FSDYI RA+NK K+T S++
Sbjct: 230 RTMSSNKISDDDDDAKKKESVKDH--FSDYIHRAKNKFKSTPSNL 272

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6606435.11.95e-8299.22hypothetical protein SDJN03_03752, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6571440.12.55e-3457.81hypothetical protein SDJN03_28168, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0057288.15.19e-2246.90hypothetical protein E6C27_scaffold280G001290 [Cucumis melo var. makuwa] >TYK134... [more]
KGN47879.11.49e-1845.83hypothetical protein Csa_004306 [Cucumis sativus][more]
PQM34950.15.24e-0638.00uncharacterized protein Pyn_31712 [Prunus yedoensis var. nudiflora][more]
Match NameE-valueIdentityDescription
A0A5D3CQZ72.51e-2246.90Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KG947.20e-1945.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409360 PE=4 SV=1[more]
A0A314UC872.54e-0638.00Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_317... [more]
A0A6J5VR302.36e-0536.19Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS52131 PE=4 S... [more]
A0A6P5RSE88.27e-0534.29uncharacterized protein LOC110748293 OS=Prunus avium OX=42229 GN=LOC110748293 PE... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..107
NoneNo IPR availablePANTHERPTHR36746BNAC04G51760D PROTEINcoord: 44..127
NoneNo IPR availablePANTHERPTHR36746:SF3BNAC04G51760D PROTEINcoord: 44..127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g01520.1Cp4.1LG05g01520.1mRNA