Cp4.1LG05g01520 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGGAACTCCAAATCCTCCAAGCGCAACCCCGTGTGCGAGAAGCTTCTCAAGGCTCTTGGCTTGTATCCTAGAATCCTCAAATTTGGCCCTCCGCCAAACCGCCAGGAAGAACCCAAACCGGCTGCCCTGGCTCACTCGTATTCTCTGCAAATTCAGGATGATGAAGTTGAGAAAGAACAAAAGCCCAGCGAAGATGTAAACGACGTGTTTAGCGATTACATCAGTCGGGCTAAACGTAGGCTGGGAAGCATATCAAGCAAGCGACATGATTGGAGTAGCAGAGGAAAGGAGAACGTCAAAGAAGATAATCCCTTTTCGGACTATATCGTTCGAGCTAGGAATAAGCTGAAGGCTACGTCCTCAAGTGTAAAGCGAGAATAG ATGGGAAGGAACTCCAAATCCTCCAAGCGCAACCCCGTGTGCGAGAAGCTTCTCAAGGCTCTTGGCTTGTATCCTAGAATCCTCAAATTTGGCCCTCCGCCAAACCGCCAGGAAGAACCCAAACCGGCTGCCCTGGCTCACTCGTATTCTCTGCAAATTCAGGATGATGAAGTTGAGAAAGAACAAAAGCCCAGCGAAGATGTAAACGACGTGTTTAGCGATTACATCAGTCGGGCTAAACGTAGGCTGGGAAGCATATCAAGCAAGCGACATGATTGGAGTAGCAGAGGAAAGGAGAACGTCAAAGAAGATAATCCCTTTTCGGACTATATCGTTCGAGCTAGGAATAAGCTGAAGGCTACGTCCTCAAGTGTAAAGCGAGAATAG ATGGGAAGGAACTCCAAATCCTCCAAGCGCAACCCCGTGTGCGAGAAGCTTCTCAAGGCTCTTGGCTTGTATCCTAGAATCCTCAAATTTGGCCCTCCGCCAAACCGCCAGGAAGAACCCAAACCGGCTGCCCTGGCTCACTCGTATTCTCTGCAAATTCAGGATGATGAAGTTGAGAAAGAACAAAAGCCCAGCGAAGATGTAAACGACGTGTTTAGCGATTACATCAGTCGGGCTAAACGTAGGCTGGGAAGCATATCAAGCAAGCGACATGATTGGAGTAGCAGAGGAAAGGAGAACGTCAAAGAAGATAATCCCTTTTCGGACTATATCGTTCGAGCTAGGAATAAGCTGAAGGCTACGTCCTCAAGTGTAAAGCGAGAATAG MGRNSKSSKRNPVCEKLLKALGLYPRILKFGPPPNRQEEPKPAALAHSYSLQIQDDEVEKEQKPSEDVNDVFSDYISRAKRRLGSISSKRHDWSSRGKENVKEDNPFSDYIVRARNKLKATSSSVKRE Homology
BLAST of Cp4.1LG05g01520 vs. NCBI nr
Match: KAG6606435.1 (hypothetical protein SDJN03_03752, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 247 bits (631), Expect = 1.95e-82 Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0
BLAST of Cp4.1LG05g01520 vs. NCBI nr
Match: KAG6571440.1 (hypothetical protein SDJN03_28168, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 125 bits (315), Expect = 2.55e-34 Identity = 74/128 (57.81%), Postives = 92/128 (71.88%), Query Frame = 0
BLAST of Cp4.1LG05g01520 vs. NCBI nr
Match: KAA0057288.1 (hypothetical protein E6C27_scaffold280G001290 [Cucumis melo var. makuwa] >TYK13444.1 hypothetical protein E5676_scaffold496G00660 [Cucumis melo var. makuwa]) HSP 1 Score: 95.5 bits (236), Expect = 5.19e-22 Identity = 68/145 (46.90%), Postives = 84/145 (57.93%), Query Frame = 0
BLAST of Cp4.1LG05g01520 vs. NCBI nr
Match: KGN47879.1 (hypothetical protein Csa_004306 [Cucumis sativus]) HSP 1 Score: 86.7 bits (213), Expect = 1.49e-18 Identity = 66/144 (45.83%), Postives = 82/144 (56.94%), Query Frame = 0
BLAST of Cp4.1LG05g01520 vs. NCBI nr
Match: PQM34950.1 (uncharacterized protein Pyn_31712 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 55.5 bits (132), Expect = 5.24e-06 Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of Cp4.1LG05g01520 vs. ExPASy TrEMBL
Match: A0A5D3CQZ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00660 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 2.51e-22 Identity = 68/145 (46.90%), Postives = 84/145 (57.93%), Query Frame = 0
BLAST of Cp4.1LG05g01520 vs. ExPASy TrEMBL
Match: A0A0A0KG94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409360 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 7.20e-19 Identity = 66/144 (45.83%), Postives = 82/144 (56.94%), Query Frame = 0
BLAST of Cp4.1LG05g01520 vs. ExPASy TrEMBL
Match: A0A314UC87 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_31712 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.54e-06 Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of Cp4.1LG05g01520 vs. ExPASy TrEMBL
Match: A0A6J5VR30 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS52131 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.36e-05 Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 0
BLAST of Cp4.1LG05g01520 vs. ExPASy TrEMBL
Match: A0A6P5RSE8 (uncharacterized protein LOC110748293 OS=Prunus avium OX=42229 GN=LOC110748293 PE=4 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 8.27e-05 Identity = 36/105 (34.29%), Postives = 61/105 (58.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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