Cp4.1LG05g01290 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG05g01290
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionRING-H2 finger protein ATL16-like
LocationCp4.1LG05: 298273 .. 300846 (-)
RNA-Seq ExpressionCp4.1LG05g01290
SyntenyCp4.1LG05g01290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGACGAAATATTATCCAACGGCAAACTGGAAATAATCGGGATTGAGTTACCCCTTATCTTCAACACAGGCGGGCAATTCACGTCTGAGAGGAGCTAAAATGGCTGCTGATTAAGCTCAACTTACTTCGTTGCTTCCTTCTTTTGAACTTCCCTCAATGAGATCAGCGACATTTCTGAAAACCCATTGCCCTTACGTTTCGCTTCCCCTTCATGGCTTCAGCTTTTCGGCAACGAAGAACTCGTTTGTTTCTGTCACTCCCTGTAAATTTGAACCATTTCTCTTTAATTTGAGAGCCAAACCGGCCCGATTCCTTGTACTTTGCTACCGGGATTCCGAGAAATCTGCTCTGGAACAACAATCTTTGGGGGTCGAAGATTCGAATGGGGCTTTGACGGTAGAGAATACAGAGCAAAATCAATGGAGCGTGGAAGTGGGTAGCCCAAGCTTTGGATTTTGGCCTCTTGCTAAATTGAGCTTGAACGATAAGGCTTTTCTTCTATTCACATTCATTGCCCTTACGGTAAATTTAACCATAGCCTCGAATTTTAAGCATTTGTTGTGTGCTGTGTGAATTTCTCCGAATTTTTGGTTGTTGTTGACTGTTTGCAATGCCGGATTCATGACAAATAACTCTTTGAGACTTGACAATGGTTCTTTTCTTTTCCTGTTTTTCTCCTCCTCGGTTCCTAAGAAATAGAATAATTTCTCATCTTACCGGTTCTTCAAAGCTTCTCCTGACAACTTTTTACTCATATCTTACAAAACAATATCTAATTTTAGAGAATCAGAGATGTTGAGCTCCGGAAAGAAAAAGGGATTATAGAGATGATATATTTTTTTAATATAAACAATCCAACAAAACAATGAAGTTGTGGTCTAATGAGAGGTCAATAAGGGTCATCAGAATAATAAAAAGCTTAAACGGTACGAGTTCAATCTATGGTAAGCACCTACATGATTTAATTTTCTACGTGATCTTGGGCAACTAAATCTAGTAGGGTCAGGTGGTGACCTCGTGAGATTAATTGAGGTGCACACACAACTAAAAAAAAAAAATCATTAGCTGATCACTTCCAGCCCGGGGTGTTCGAGCAAATTAAATTTTTCTTCGGTGCCATTGGTGTATTATTTCCATAGAAGCTCGAGTAGCTTGACATGGTTCTAGGGTGCTATAGATGAACATTTAAACTATGTTGGTTGTTTCTGAATTGAAAAAATTACTTGAGGATTTTTGCTTTCAAAACTCCTTATGATTGAGTTTAATTATGTTGGATGTTTCTGAATTGTGGGCTTGATAGGAGCTGACCAGTGCTTGCTGACGGAAATATGTCATGAATGCCAACTTTCACATCTTTTTAATGAGATAATTGGTCATTGTGCATTTGTATAAACATTGATTGGTGCTCATTGGTGTAGACTTCTGTGGCATTTACAAGCCTTGTCATTGCAGCTGTGCCAACATTTAATGTAAGTTCATTTAGCTTTCAAGCACATTTTCTTACACTTTTGCTTTTATTCATGTTTTTTTTTTCTCTTTATACAAATCCACATATTAATCAAGAAAGCCCATTTTATGTAGGCAATGCGCAGAGCTGCCATTTCACTTTCAAAGCTAGCTGACACAGCTCGTGAAGAACTTCCTGGTACAATGGCCGCCATTAGACTTTCAGGCATGGAGATCAGTGATCTAACTCTTGAACTAAGTGATCTAAGGTGAGAACAAATCCTTATCCATGCACATATCTCCTTACTGATGGTTTTATAATTATATTAGACATTTGAATTGAGATGGACAGTGTCTCCTGTGGCATGCTGGATTTTTGGTAAATCTTTAGAATACTTGGTTCTAAGTAGAAATATTTTTAAGGGTATTGAGGAGAGGTGGGATGAGGTTAAATGTAGCTCCCTCTGAGTAATTCGTGTCGATTCTGTTTTGATAAGCAGCCGGGAGATAGCTGATGGGGTAAACAAATCTGCTCAGGCCGTCCAAGCAGCAGAAGCTGGAATTCGGCAGATCGGTGCACTTGCCCACCAACAAACTATGTGTATGTTTGACTCATAACTTATTCTACACGTTCTTATAAACCAAGCACCAGAGTTTAACGGCGTATATTATGTTGTCTGCATGATACAGCAATGATTGAAGAGAGAGCAAGTCTGCCCATTATTTCTTTGCAGCCTGTTGTTGTTGGAGCTGCAAAGAAGACTTCTCGTGCTGTTGGCAAAGCCACACGAACGATCATGAAAATGATATCCGGAGGAGAAAGTACGGAGAATGATGATGATAATAGTTTAGATAGACTGGAAGTTTAAGTTTAATGGTTCCTTGCTTCAAATCAAAACAATGGTGTAAATATCACACGAGTGTAGATCATGTAGTTGTTGATATGAAGTCGAAACACATGTTTAGACATTCAAAACTGGAAAATTTTCTTACAAAGACTTATAAATCAGCTTTATCCTATCCCCCGACTTGTTTCCAGACCTGTTGAGGCAATAGAGCTTACCAGAGCCAAGGCTCTCTGTCTGTTCACTCTACCATCTGGAAAGGTTGTACATAAAATCTAGGAT

mRNA sequence

AGAGACGAAATATTATCCAACGGCAAACTGGAAATAATCGGGATTGAGTTACCCCTTATCTTCAACACAGGCGGGCAATTCACGTCTGAGAGGAGCTAAAATGGCTGCTGATTAAGCTCAACTTACTTCGTTGCTTCCTTCTTTTGAACTTCCCTCAATGAGATCAGCGACATTTCTGAAAACCCATTGCCCTTACGTTTCGCTTCCCCTTCATGGCTTCAGCTTTTCGGCAACGAAGAACTCGTTTGTTTCTGTCACTCCCTGTAAATTTGAACCATTTCTCTTTAATTTGAGAGCCAAACCGGCCCGATTCCTTGTACTTTGCTACCGGGATTCCGAGAAATCTGCTCTGGAACAACAATCTTTGGGGGTCGAAGATTCGAATGGGGCTTTGACGGTAGAGAATACAGAGCAAAATCAATGGAGCGTGGAAGTGGGTAGCCCAAGCTTTGGATTTTGGCCTCTTGCTAAATTGAGCTTGAACGATAAGGCTTTTCTTCTATTCACATTCATTGCCCTTACGACTTCTGTGGCATTTACAAGCCTTGTCATTGCAGCTGTGCCAACATTTAATGCAATGCGCAGAGCTGCCATTTCACTTTCAAAGCTAGCTGACACAGCTCGTGAAGAACTTCCTGGTACAATGGCCGCCATTAGACTTTCAGGCATGGAGATCAGTGATCTAACTCTTGAACTAAGTGATCTAAGCCGGGAGATAGCTGATGGGGTAAACAAATCTGCTCAGGCCGTCCAAGCAGCAGAAGCTGGAATTCGGCAGATCGGTGCACTTGCCCACCAACAAACTATGTCAATGATTGAAGAGAGAGCAAGTCTGCCCATTATTTCTTTGCAGCCTGTTGTTGTTGGAGCTGCAAAGAAGACTTCTCGTGCTGTTGGCAAAGCCACACGAACGATCATGAAAATGATATCCGGAGGAGAAAGTACGGAGAATGATGATGATAATAGTTTAGATAGACTGGAAGTTTAAGTTTAATGGTTCCTTGCTTCAAATCAAAACAATGGTGTAAATATCACACGAGTGTAGATCATGTAGTTGTTGATATGAAGTCGAAACACATGTTTAGACATTCAAAACTGGAAAATTTTCTTACAAAGACTTATAAATCAGCTTTATCCTATCCCCCGACTTGTTTCCAGACCTGTTGAGGCAATAGAGCTTACCAGAGCCAAGGCTCTCTGTCTGTTCACTCTACCATCTGGAAAGGTTGTACATAAAATCTAGGAT

Coding sequence (CDS)

ATGAGATCAGCGACATTTCTGAAAACCCATTGCCCTTACGTTTCGCTTCCCCTTCATGGCTTCAGCTTTTCGGCAACGAAGAACTCGTTTGTTTCTGTCACTCCCTGTAAATTTGAACCATTTCTCTTTAATTTGAGAGCCAAACCGGCCCGATTCCTTGTACTTTGCTACCGGGATTCCGAGAAATCTGCTCTGGAACAACAATCTTTGGGGGTCGAAGATTCGAATGGGGCTTTGACGGTAGAGAATACAGAGCAAAATCAATGGAGCGTGGAAGTGGGTAGCCCAAGCTTTGGATTTTGGCCTCTTGCTAAATTGAGCTTGAACGATAAGGCTTTTCTTCTATTCACATTCATTGCCCTTACGACTTCTGTGGCATTTACAAGCCTTGTCATTGCAGCTGTGCCAACATTTAATGCAATGCGCAGAGCTGCCATTTCACTTTCAAAGCTAGCTGACACAGCTCGTGAAGAACTTCCTGGTACAATGGCCGCCATTAGACTTTCAGGCATGGAGATCAGTGATCTAACTCTTGAACTAAGTGATCTAAGCCGGGAGATAGCTGATGGGGTAAACAAATCTGCTCAGGCCGTCCAAGCAGCAGAAGCTGGAATTCGGCAGATCGGTGCACTTGCCCACCAACAAACTATGTCAATGATTGAAGAGAGAGCAAGTCTGCCCATTATTTCTTTGCAGCCTGTTGTTGTTGGAGCTGCAAAGAAGACTTCTCGTGCTGTTGGCAAAGCCACACGAACGATCATGAAAATGATATCCGGAGGAGAAAGTACGGAGAATGATGATGATAATAGTTTAGATAGACTGGAAGTTTAA

Protein sequence

MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDSEKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIALTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAKKTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV
Homology
[Close]
BLAST of Cp4.1LG05g01290 vs. NCBI nr
Match: XP_023533033.1 (uncharacterized protein LOC111795040 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 519 bits (1336), Expect = 4.93e-185
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0 

Query: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60
           MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS
Sbjct: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60

Query: 61  EKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIA 120
           EKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIA
Sbjct: 61  EKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIA 120

Query: 121 LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180
           LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL
Sbjct: 121 LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180

Query: 181 SDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240
           SDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK
Sbjct: 181 SDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240

Query: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276
           KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV
Sbjct: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276

[Close]
BLAST of Cp4.1LG05g01290 vs. NCBI nr
Match: XP_022996244.1 (uncharacterized protein LOC111491526 [Cucurbita maxima])

HSP 1 Score: 503 bits (1295), Expect = 8.75e-179
Identity = 268/276 (97.10%), Postives = 272/276 (98.55%), Query Frame = 0 

Query: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60
           MRSAT LKTHCPYVSLPLHGFSFSATKNS VSVTPCKFEPFLFNLRAKPARFLVLCYRDS
Sbjct: 1   MRSATSLKTHCPYVSLPLHGFSFSATKNSSVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60

Query: 61  EKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIA 120
           EKSALEQQS+GVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAK SL+DKAFLLFTFIA
Sbjct: 61  EKSALEQQSVGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKFSLSDKAFLLFTFIA 120

Query: 121 LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180
           LT SVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL
Sbjct: 121 LTISVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180

Query: 181 SDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240
           SDLS+EIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMI+ERASLPIISLQPVVVGAAK
Sbjct: 181 SDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVVGAAK 240

Query: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276
           KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV
Sbjct: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276

[Close]
BLAST of Cp4.1LG05g01290 vs. NCBI nr
Match: KAG6606380.1 (hypothetical protein SDJN03_03697, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036320.1 hypothetical protein SDJN02_03123 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499 bits (1285), Expect = 2.93e-177
Identity = 267/276 (96.74%), Postives = 271/276 (98.19%), Query Frame = 0 

Query: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60
           MRSATFLKTHCP VSLPLHGFS S TKNS VSVTP KFEPFLFNLRAKPARFLVLCYRDS
Sbjct: 1   MRSATFLKTHCPCVSLPLHGFSSSPTKNSIVSVTPSKFEPFLFNLRAKPARFLVLCYRDS 60

Query: 61  EKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIA 120
           EKSALEQQS+GVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSL+DKAFLLFTF+A
Sbjct: 61  EKSALEQQSVGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLSDKAFLLFTFVA 120

Query: 121 LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180
           LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL
Sbjct: 121 LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180

Query: 181 SDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240
           SDLS+EIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK
Sbjct: 181 SDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240

Query: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276
           KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV
Sbjct: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276

[Close]
BLAST of Cp4.1LG05g01290 vs. NCBI nr
Match: XP_022931045.1 (uncharacterized protein LOC111437355 [Cucurbita moschata])

HSP 1 Score: 498 bits (1283), Expect = 5.90e-177
Identity = 266/276 (96.38%), Postives = 271/276 (98.19%), Query Frame = 0 

Query: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60
           MRSATFLKTHCP VSLPLHGFS S TKNS VSVTPCKFEPFLFNLRAKPARFLVLCYRDS
Sbjct: 1   MRSATFLKTHCPCVSLPLHGFSSSPTKNSIVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60

Query: 61  EKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIA 120
           EKSALEQQS+GVEDS+GALTVENTEQNQWSVE+GSPSFGFWPLAKLSL+DKAFLLFTFIA
Sbjct: 61  EKSALEQQSVGVEDSSGALTVENTEQNQWSVELGSPSFGFWPLAKLSLSDKAFLLFTFIA 120

Query: 121 LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180
           L TSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL
Sbjct: 121 LATSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180

Query: 181 SDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240
           SDLS+EIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK
Sbjct: 181 SDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240

Query: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276
           KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV
Sbjct: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276

[Close]
BLAST of Cp4.1LG05g01290 vs. NCBI nr
Match: XP_038889010.1 (uncharacterized protein LOC120078775 [Benincasa hispida])

HSP 1 Score: 416 bits (1068), Expect = 3.09e-144
Identity = 226/276 (81.88%), Postives = 245/276 (88.77%), Query Frame = 0 

Query: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60
           MRSAT L  H P+  LP+HGF+ S +KN  + V+ CKF+P  FNLRAKP R +V CYRDS
Sbjct: 1   MRSATLL--HSPFFFLPVHGFTSSTSKNPILFVSHCKFKPTFFNLRAKPDRLVVFCYRDS 60

Query: 61  EKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIA 120
           EKS  ++QS+GVEDSNGAL  EN E+NQW+VEVGSP  GF  L +L+L+DKAFLL TFIA
Sbjct: 61  EKSVRDEQSVGVEDSNGALMEENVERNQWNVEVGSPGVGFRSLPRLNLSDKAFLLLTFIA 120

Query: 121 LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180
           LTTSVAFTSLVIAAVPT NAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL
Sbjct: 121 LTTSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180

Query: 181 SDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240
           SDLS+EIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMI+ERASLPIISLQPVV GAAK
Sbjct: 181 SDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVAGAAK 240

Query: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276
           KTSRAVGKATRTIMKMISGGE+ ENDDDNSLDRLEV
Sbjct: 241 KTSRAVGKATRTIMKMISGGENMENDDDNSLDRLEV 274

[Close]
BLAST of Cp4.1LG05g01290 vs. ExPASy TrEMBL
Match: A0A6J1K868 (uncharacterized protein LOC111491526 OS=Cucurbita maxima OX=3661 GN=LOC111491526 PE=4 SV=1)

HSP 1 Score: 503 bits (1295), Expect = 4.24e-179
Identity = 268/276 (97.10%), Postives = 272/276 (98.55%), Query Frame = 0 

Query: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60
           MRSAT LKTHCPYVSLPLHGFSFSATKNS VSVTPCKFEPFLFNLRAKPARFLVLCYRDS
Sbjct: 1   MRSATSLKTHCPYVSLPLHGFSFSATKNSSVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60

Query: 61  EKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIA 120
           EKSALEQQS+GVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAK SL+DKAFLLFTFIA
Sbjct: 61  EKSALEQQSVGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKFSLSDKAFLLFTFIA 120

Query: 121 LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180
           LT SVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL
Sbjct: 121 LTISVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180

Query: 181 SDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240
           SDLS+EIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMI+ERASLPIISLQPVVVGAAK
Sbjct: 181 SDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVVGAAK 240

Query: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276
           KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV
Sbjct: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276

[Close]
BLAST of Cp4.1LG05g01290 vs. ExPASy TrEMBL
Match: A0A6J1EYE8 (uncharacterized protein LOC111437355 OS=Cucurbita moschata OX=3662 GN=LOC111437355 PE=4 SV=1)

HSP 1 Score: 498 bits (1283), Expect = 2.86e-177
Identity = 266/276 (96.38%), Postives = 271/276 (98.19%), Query Frame = 0 

Query: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60
           MRSATFLKTHCP VSLPLHGFS S TKNS VSVTPCKFEPFLFNLRAKPARFLVLCYRDS
Sbjct: 1   MRSATFLKTHCPCVSLPLHGFSSSPTKNSIVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60

Query: 61  EKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIA 120
           EKSALEQQS+GVEDS+GALTVENTEQNQWSVE+GSPSFGFWPLAKLSL+DKAFLLFTFIA
Sbjct: 61  EKSALEQQSVGVEDSSGALTVENTEQNQWSVELGSPSFGFWPLAKLSLSDKAFLLFTFIA 120

Query: 121 LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180
           L TSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL
Sbjct: 121 LATSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180

Query: 181 SDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240
           SDLS+EIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK
Sbjct: 181 SDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240

Query: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276
           KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV
Sbjct: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276

[Close]
BLAST of Cp4.1LG05g01290 vs. ExPASy TrEMBL
Match: A0A5D3DAC3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001000 PE=4 SV=1)

HSP 1 Score: 403 bits (1036), Expect = 1.11e-139
Identity = 220/276 (79.71%), Postives = 240/276 (86.96%), Query Frame = 0 

Query: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60
           MR++TFL  H  Y   P+ GF+ S +K S + V PCKF+P  FNLRAKP R +V CY DS
Sbjct: 1   MRTSTFL--HSAYFLFPVRGFTCSTSKKSILFVAPCKFKPAFFNLRAKPDRLVVFCYGDS 60

Query: 61  EKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIA 120
           E+S  ++QS+GVEDSN  L  EN E+N+W+VE+G+PS GF  L KLSL+DKAFLL TFIA
Sbjct: 61  ERSVRDEQSIGVEDSNVTLVEENVERNRWNVELGTPSVGFQLLPKLSLSDKAFLLLTFIA 120

Query: 121 LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180
           LTTSVAFTSLVIAAVPT NAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL
Sbjct: 121 LTTSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180

Query: 181 SDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240
           SDLS+EIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMI+ERASLPIISLQPVV GAAK
Sbjct: 181 SDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVAGAAK 240

Query: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276
           KTS AVGKATRTIMKMISGGES ENDDDNSLDRLEV
Sbjct: 241 KTSHAVGKATRTIMKMISGGESVENDDDNSLDRLEV 274

[Close]
BLAST of Cp4.1LG05g01290 vs. ExPASy TrEMBL
Match: A0A1S3BHG6 (uncharacterized protein LOC103489884 OS=Cucumis melo OX=3656 GN=LOC103489884 PE=4 SV=1)

HSP 1 Score: 403 bits (1036), Expect = 1.11e-139
Identity = 220/276 (79.71%), Postives = 240/276 (86.96%), Query Frame = 0 

Query: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60
           MR++TFL  H  Y   P+ GF+ S +K S + V PCKF+P  FNLRAKP R +V CY DS
Sbjct: 1   MRTSTFL--HSAYFLFPVRGFTCSTSKKSILFVAPCKFKPAFFNLRAKPDRLVVFCYGDS 60

Query: 61  EKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIA 120
           E+S  ++QS+GVEDSN  L  EN E+N+W+VE+G+PS GF  L KLSL+DKAFLL TFIA
Sbjct: 61  ERSVRDEQSIGVEDSNVTLVEENVERNRWNVELGTPSVGFQLLPKLSLSDKAFLLLTFIA 120

Query: 121 LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180
           LTTSVAFTSLVIAAVPT NAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL
Sbjct: 121 LTTSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180

Query: 181 SDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240
           SDLS+EIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMI+ERASLPIISLQPVV GAAK
Sbjct: 181 SDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVAGAAK 240

Query: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276
           KTS AVGKATRTIMKMISGGES ENDDDNSLDRLEV
Sbjct: 241 KTSHAVGKATRTIMKMISGGESVENDDDNSLDRLEV 274

[Close]
BLAST of Cp4.1LG05g01290 vs. ExPASy TrEMBL
Match: A0A6J1HHL4 (uncharacterized protein LOC111464126 OS=Cucurbita moschata OX=3662 GN=LOC111464126 PE=4 SV=1)

HSP 1 Score: 392 bits (1006), Expect = 3.30e-135
Identity = 219/276 (79.35%), Postives = 236/276 (85.51%), Query Frame = 0 

Query: 1   MRSATFLKTHCPYVSLPLHGFSFSATKNSFVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60
           MRSATFL   CPY  LP+HGFS S +KNS       KF+P  FN RAKPAR +V C RDS
Sbjct: 1   MRSATFLC--CPYFLLPVHGFSSSTSKNSI------KFKPTFFNSRAKPARLVVFCCRDS 60

Query: 61  EKSALEQQSLGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIA 120
           EKS   +QS+G++DSN AL  +N E+ QW+ EVG PS GF PLAKLSL+DKA LL TFIA
Sbjct: 61  EKSVRNEQSVGIDDSNRALMEKNIERMQWNEEVGCPSVGFQPLAKLSLSDKASLLLTFIA 120

Query: 121 LTTSVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180
           LT SVAFTSLVIAAVPT NAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL
Sbjct: 121 LTASVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180

Query: 181 SDLSREIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAK 240
           SDLS+EIADGVNKSAQAVQAAEAGIRQI A+AHQ+TMSMI+ERA LP+ISLQPVV GAAK
Sbjct: 181 SDLSQEIADGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAK 240

Query: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276
           KTSRAVGKATRTIMKMISGGES ENDDDNSLDRLEV
Sbjct: 241 KTSRAVGKATRTIMKMISGGESMENDDDNSLDRLEV 268

[Close]
BLAST of Cp4.1LG05g01290 vs. TAIR 10
Match: AT1G08530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09995.2); Has 140 Blast hits to 140 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 221.5 bits (563), Expect = 8.5e-58
Identity = 126/184 (68.48%), Postives = 149/184 (80.98%), Query Frame = 0 

Query: 84  TEQNQWSVEVGSP--SFGFWPLAKLSLNDKAFLLFTFIALTTSVAFTSLVIAAVPTFNAM 143
           T  N   ++VGSP       PLAKLSL+D+AFLL  FI  TTSVAFTSLVI A+PT  AM
Sbjct: 74  TSLNNLKMQVGSPISLHSINPLAKLSLSDQAFLLLAFIVCTTSVAFTSLVITAIPTLVAM 133

Query: 144 RRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSREIADGVNKSAQAVQAA 203
            RAA S +KLADTAR+ELP T+AA+RLSGMEISDLTLELSDLS++I DG+NKSA+AVQAA
Sbjct: 134 GRAATSFAKLADTARKELPSTLAAVRLSGMEISDLTLELSDLSQDITDGINKSAKAVQAA 193

Query: 204 EAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAKKTSRAVGKATRTIMKMISGGE 263
           EAGI+QIG LA QQT+SMIEERA+LP ISLQPVV GAA+KTS A+G AT+ +M +I+GG 
Sbjct: 194 EAGIKQIGTLAQQQTLSMIEERANLPEISLQPVVAGAAEKTSHAIGSATKRLMNIITGGN 253

Query: 264 STEN 266
             E+
Sbjct: 254 KDED 257

[Close]
BLAST of Cp4.1LG05g01290 vs. TAIR 10
Match: AT5G09995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-19
Identity = 57/127 (44.88%), Postives = 81/127 (63.78%), Query Frame = 0 

Query: 82  ENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIALTTSVAFTSLVIAAVPTFNAM 141
           E +  +Q +  VG P      L++ +   K F+L   +A  T+++ + L  AA+PT  A 
Sbjct: 68  EPSISSQLTSSVGQPPL---QLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAF 127

Query: 142 RRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSREIADGVNKSAQAVQAA 201
           ++AA SL KL D  REELP TMAA+RLSGMEISDLT+ELSDL + I  GV  S +A++ A
Sbjct: 128 KKAAESLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVA 187

Query: 202 EAGIRQI 209
           E  +R++
Sbjct: 188 EDRLRRL 191

[Close]
BLAST of Cp4.1LG05g01290 vs. TAIR 10
Match: AT5G09995.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-19
Identity = 67/177 (37.85%), Postives = 99/177 (55.93%), Query Frame = 0 

Query: 82  ENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIALTTSVAFTSLVIAAVPTFNAM 141
           E +  +Q +  VG P      L++ +   K F+L   +A  T+++ + L  AA+PT  A 
Sbjct: 68  EPSISSQLTSSVGQPPL---QLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAF 127

Query: 142 RRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSREIADGVNKSAQAVQAA 201
           ++AA SL KL D  REELP TMAA+RLSGMEISDLT+ELSDL + I  GV  S +A++ A
Sbjct: 128 KKAAESLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVA 187

Query: 202 EAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAKKTSRAVGKATRTIMKMIS 259
           E  +R+   L +    SM E          +P++   A+     V K  R++ ++ S
Sbjct: 188 EDRLRR---LTNMNPASMQEVMRQTKTDETEPMLAKQARSFREGVVKG-RSLWQLFS 237

[Close]
BLAST of Cp4.1LG05g01290 vs. TAIR 10
Match: AT5G09995.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 6.0e-19
Identity = 66/177 (37.29%), Postives = 99/177 (55.93%), Query Frame = 0 

Query: 82  ENTEQNQWSVEVGSPSFGFWPLAKLSLNDKAFLLFTFIALTTSVAFTSLVIAAVPTFNAM 141
           E +  +Q +  VG P      L++ +   K F+L   +A  T+++ + L  AA+PT  A 
Sbjct: 68  EPSISSQLTSSVGQPPL---QLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAF 127

Query: 142 RRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSREIADGVNKSAQAVQAA 201
           ++AA SL KL D  REELP TMAA+RLSGMEISDLT+ELSDL + I  GV  S +A++ A
Sbjct: 128 KKAAESLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVA 187

Query: 202 EAGIRQIGALAHQQTMSMIEERASLPIISLQPVVVGAAKKTSRAVGKATRTIMKMIS 259
           E  +R++  +      SM E          +P++   A+     V K  R++ ++ S
Sbjct: 188 EDRLRRLTNM--NPVASMQEVMRQTKTDETEPMLAKQARSFREGVVKG-RSLWQLFS 238

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g01290 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g01290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023533033.14.93e-185100.00uncharacterized protein LOC111795040 [Cucurbita pepo subsp. pepo][more]
XP_022996244.18.75e-17997.10uncharacterized protein LOC111491526 [Cucurbita maxima][more]
KAG6606380.12.93e-17796.74hypothetical protein SDJN03_03697, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022931045.15.90e-17796.38uncharacterized protein LOC111437355 [Cucurbita moschata][more]
XP_038889010.13.09e-14481.88uncharacterized protein LOC120078775 [Benincasa hispida][more]
BLAST of Cp4.1LG05g01290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K8684.24e-17997.10uncharacterized protein LOC111491526 OS=Cucurbita maxima OX=3661 GN=LOC111491526... [more]
A0A6J1EYE82.86e-17796.38uncharacterized protein LOC111437355 OS=Cucurbita moschata OX=3662 GN=LOC1114373... [more]
A0A5D3DAC31.11e-13979.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BHG61.11e-13979.71uncharacterized protein LOC103489884 OS=Cucumis melo OX=3656 GN=LOC103489884 PE=... [more]
A0A6J1HHL43.30e-13579.35uncharacterized protein LOC111464126 OS=Cucurbita moschata OX=3662 GN=LOC1114641... [more]
BLAST of Cp4.1LG05g01290 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G08530.18.5e-5868.48unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G09995.11.6e-1944.88unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G09995.32.1e-1937.85unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G09995.26.0e-1937.29unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33825CHITINASE-LIKE PROTEINcoord: 23..276
NoneNo IPR availablePANTHERPTHR33825:SF14CHITINASE-LIKE PROTEINcoord: 23..276

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g01290.1Cp4.1LG05g01290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016740 transferase activity