Cp4.1LG05g00900 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g00900
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	F-box protein At1g52495-like
Location	Cp4.1LG05: 408495 .. 412135 (-)
RNA-Seq Expression	Cp4.1LG05g00900
Synteny	Cp4.1LG05g00900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATGAACAGCAGCAGCTACTTACCAGAGGACATCATAATTGAAATTCTTCGCCACTTCTCTCTAAGATCTCTCGCTAAAGCAAACTGTGTCTCTAAGCTCTGGCAAACCCATATTTCCACCATACCTCTCCTTCTTCATGCCGCCATTTCCTCTCCTCTGCACCATGGCTTCTTCTTTCAGGGCTCCACCATCAGCAAAAATGGCGTCCCGATTCACTTCTTCCCCTCCTCTCTCAATATTCTTAACACCCATTTCTATAAACTGATTGCCTCTAGCAACGGCCTTCTTCTCTGCGGCAAATCCAATCAAAACCCTATTGTCAACTACTCTGTCTGGAATCCCGCCTCCAATCGCCTGATTCCAATCCCGAAACCGAGGAATCTCTTCACCGGCGTTAAGATCGGATTCCATTCCCATGATTCTGTTTCGTTCACCATTCTTCGATTTGGGAATTTAGGGCTCGAACCGATGGAGATTTTCTCGTCTGAAACAGGGGAATGGCGGCACTTGGCCTTCAATTTGGCGATGGATTCATTGTTTTTGCCCTTCGAAGGGCCGTCGGCGGTGGTTCTAAACGGGGTGTTTTACTGGCTGGAGTTTCGATCGATGATTTACGCTTTCGATTTGCTAAAAAACGAGTTTCTGAAAGTGGGATTTCCATTTGAGGAACCGGAGTATCGCCGGGAAGTATTCTCCCGTTGCCTCGCCGTCGCGGGTGGGGAGGTGGTGATGGCGTCGACCAACGGCGAGGTTATTGAGATTTGGATTCTTCAGGATAAGGCATCGTCTTTGTGGGGTTTGAAGTGTAGATTAAACGTTGAAAGTCTCGTTGGCATTATCGCAAACACCTTGTGCGCAAGGGCGGCGACGGCGGCGGTTGGGCGGAGAATTGTTGGGATTGTGGGGTTTCAGGCATGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGTAGTGGTTTGTTGTGATATTGGAAGTGGGAAAGTTGAGATTGTTCACCGATTTGACGAGAGCTTGGGATGTACGGATGTTTCTGACTTCATGTTCTTACCTTACGAGTGTGTTCAGCTTGGTTGATTGTTGTAATGTTCGCAATGAGTAGAGCCCAGATATTTAAACCTCTACCAACTCGGTTAGGATGTGTCCACCCGTTAAGCTTTATTCAATAACACTCAATGGTCACTCATGTAGATTTCAGTCTTCACATTTTGCTTCAATGTTTCATTTGGTTGACTATAATCATTATTGCTTTCTTTCCTTCCAGATGATTTCTTGGAAAATCTAAAATTTGGATCAATTTAAGGGTTACATTTTTTTGTTCGGTCAATCCGACCAACTCGTCGAAAATAGGGTTACAACCTTTTAATATTTTTTCGAAAATTAAAAATATTTGACGTTTATAAACAATAATTAAAAAAAAAAAAAAAAAAAAAACANTTAAAATTAATAACCATGGTTAATTTAGGGTAAAGTTTGTTTTAGTTTTCCTATTAATCAATGAAACGATGTCGTATTAAGTCATGTGAAACGGGCTTAGCAAAACACGGAGGACAGTAAAGAACTGCGTTTAGACACATCGACTAAAACCCTAACCCCAGAAAACGTAGACTCTGCGCCGTCGTCTTTTCATATATTAAGAACCGCATTTGTTTTCATTTGCTTTTTTGATCGGAGGATAGAGAAGGCAGCTAGAGAGCTCGTCGACAATGTCGAAGCGAGGTATGGTTTGATCGTTCTATGTCCATTTTGTTCCCGACGTTCTCTTTATATGTAACTGTAAACGCACTAGTTGATTCGATCTTTGTTTTGCTACTGTTTTCATATTCTAAGATTTGAGGTTTGTTATTGCTGTGTATCTATTTAGGTAGGGGAGGTTCCGCCGGGAATAAATTTAGGATGTCGCTAGGTCTTCCTGTGGCGGCTACAGTGAACTGTGCCGATAACACAGGAGCTAAGAACCTCTATATCATTTCGGTGAAGGGGATCAAGGGCCGCCTCAACCGTCTGCCATCTGCTTGTGTTGGTGACATGGTTATGGCGACGGTCAAGAAGGGAAAACCTGACCTCAGGAAGAAGGTGCTGCCTGCTGTTATTGTCAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGTGTCTTTATGTACTTCGAAGGTAATTCACTACTTAAATTACCTGTCGTATTTCGCTTCCGATCATTTTTATACCATGTTATCTTGCGTTTAGGTTAGTTTGTGTAGGCATATAGTTATCGTTCTAGTTAACATTGATCGAATGGATTGTTGATATTGGATGTAGTATCGGCGGTTATTCTTTGTTGATTGAATCTATCTTAAAATTTGTGGATGATTTCTGTTCTTTATGTGTTGTGGATGAAATTTGGGTTAAGAAAATCTTATTACTCTGTTAGTTTAGTTTCATACAAACATGGTCTGTGTAGATTGTTAATTTTGGTGCTTTCTATTTTTATTCGATGGCAAAGGTTATTCATAGAAGCGAATATCTCCATATTTCACTTTGGATTAAATGGCTTACTATGTGATCTAGTAGTAATGTTTTCATTATATGAATGGCTATCGGGTTATGTGTTTAGTATCATATTGTTGTCAATTTTTTAGGACTGTTTCATGTCTTCACCCATATAAAATCGAATTATATAGTTGTTGGATAAGAGTCTTTTTCGTTGTGCAGATAATGCTGGTGTCATCGTGAATCCCAAAGGAGAGATGAAAGGTATGATCTCTCCTTCTTTAATGTATATAGTTCATATGTGATCTAGAAAATGATATGTAACATGTTAATCTTCTGTGTTCATTTACAATAGAAGAAGAGAAATCATCACGCCCTCGATATTTTACCTTTGTTGATGTTTTATTTCTCTGGAATAATGCACCGTAAATATCAATGTATTTGACCTTACTTAACTAGAAATGTAGTTTGAGTACTGATAATTTTGGAGGTGTTCTGGTTTTCATACTTTCGTTTATTTTGCTTTCATGGATTTGAATGGTTATTTTCTTGGGTCTTGCAGGTTCTGCTATAACAGGCCCAATTGGAAAGGAATGTGCGGATCTCTGGCCGAGAATTGCAAGTGCTGCTAATGCTATTGTTTGACCATCAAATCAAGTGAATTGTTATCCTTCTAGGCTAGGATTATATGATTAAATTTCATTGTTGGGATTAACTTACTTTATCTTGACAAGAAATTATGGTTATGAGTTTTGGTTGATACTCAATGTGTTTTGTCTCTATAGATGAAGTTAATTTGTGCCCATGATTTGATTTCTGGTACCGATTCAAAAGTCTCCCTATCAGATTGTCTGCAGGGTAGGGAAGGAAATGATCGGGAGGAAACCTTGTCATTTCTCGGCATTGCAGTGAGGGTCGTGGTTGTGGATATCGGTCCTCTCGGGAATTAACGAGGTATCGGAATTCTGAACATAAAATTTTCCCCTCACATAAGTCTAAGAATCAGGAACAGGAAAAACTAGAGAAGTTTCCATTTCCATGTTTGTTTGATGCCATATATGCCTCTCTGATTGATTGATTCGTGATTCTTCCTCCACGATGATAAAATTAGATTTTGTTTTCTATAAAAACTAGGACATTCGATGAACACTTGGAACATTTGGAAATTCTA

mRNA sequence

ATGGCGATGAACAGCAGCAGCTACTTACCAGAGGACATCATAATTGAAATTCTTCGCCACTTCTCTCTAAGATCTCTCGCTAAAGCAAACTGTGTCTCTAAGCTCTGGCAAACCCATATTTCCACCATACCTCTCCTTCTTCATGCCGCCATTTCCTCTCCTCTGCACCATGGCTTCTTCTTTCAGGGCTCCACCATCAGCAAAAATGGCGTCCCGATTCACTTCTTCCCCTCCTCTCTCAATATTCTTAACACCCATTTCTATAAACTGATTGCCTCTAGCAACGGCCTTCTTCTCTGCGGCAAATCCAATCAAAACCCTATTGTCAACTACTCTGTCTGGAATCCCGCCTCCAATCGCCTGATTCCAATCCCGAAACCGAGGAATCTCTTCACCGGCGTTAAGATCGGATTCCATTCCCATGATTCTGTTTCGTTCACCATTCTTCGATTTGGGAATTTAGGGCTCGAACCGATGGAGATTTTCTCGTCTGAAACAGGGGAATGGCGGCACTTGGCCTTCAATTTGGCGATGGATTCATTGTTTTTGCCCTTCGAAGGGCCGTCGGCGGTGGTTCTAAACGGGGTGTTTTACTGGCTGGAGTTTCGATCGATGATTTACGCTTTCGATTTGCTAAAAAACGAGTTTCTGAAAGTGGGATTTCCATTTGAGGAACCGGAGTATCGCCGGGAAGTATTCTCCCGTTGCCTCGCCGTCGCGGGTGGGGAGGTGGTGATGGCGTCGACCAACGGCGAGGTTATTGAGATTTGGATTCTTCAGGATAAGGCATCGTCTTTGTGGGGTTTGAAGTGTAGATTAAACGTTGAAAGTCTCGTTGGCATTATCGCAAACACCTTGTGCGCAAGGGCGGCGACGGCGGCGGTTGGGCGGAGAATTGTTGGGATTGTGGGGTTTCAGGCATGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGTAGTGGTTTGTTGTGATATTGGAAGTGGGAAAGTTGAGATTGTTCACCGATTTGACGAGAGCTTGGGATGTACGGATGTTTCTGACTTCATGTTCTTACCTTACGAGATAGAGAAGGCAGCTAGAGAGCTCGTCGACAATGTCGAAGCGAGTATCGGCGGTTATTCTTTGTTGATTGAATCTATCTTAAAATTTGTGGATGATTTCTGTTCTTTATGTGTTGTGGATGAAATTTGGGTTAAGAAAATCTTATTACTCTATAATGCTGGTGTCATCGTGAATCCCAAAGGAGAGATGAAAGGTTCTGCTATAACAGGCCCAATTGGAAAGGAATGTGCGGATCTCTGGCCGAGAATTGCAAGTGCTGCTAATGCTATTATGAAGTTAATTTGTGCCCATGATTTGATTTCTGGTACCGATTCAAAAGTCTCCCTATCAGATTGTCTGCAGGGTAGGGAAGGAAATGATCGGGAGGAAACCTTGTCATTTCTCGGCATTGCAGTGAGGGTCGTGGTTGTGGATATCGGTCCTCTCGGGAATTAACGAGGTATCGGAATTCTGAACATAAAATTTTCCCCTCACATAAGTCTAAGAATCAGGAACAGGAAAAACTAGAGAAGTTTCCATTTCCATGTTTGTTTGATGCCATATATGCCTCTCTGATTGATTGATTCGTGATTCTTCCTCCACGATGATAAAATTAGATTTTGTTTTCTATAAAAACTAGGACATTCGATGAACACTTGGAACATTTGGAAATTCTA

Coding sequence (CDS)

ATGGCGATGAACAGCAGCAGCTACTTACCAGAGGACATCATAATTGAAATTCTTCGCCACTTCTCTCTAAGATCTCTCGCTAAAGCAAACTGTGTCTCTAAGCTCTGGCAAACCCATATTTCCACCATACCTCTCCTTCTTCATGCCGCCATTTCCTCTCCTCTGCACCATGGCTTCTTCTTTCAGGGCTCCACCATCAGCAAAAATGGCGTCCCGATTCACTTCTTCCCCTCCTCTCTCAATATTCTTAACACCCATTTCTATAAACTGATTGCCTCTAGCAACGGCCTTCTTCTCTGCGGCAAATCCAATCAAAACCCTATTGTCAACTACTCTGTCTGGAATCCCGCCTCCAATCGCCTGATTCCAATCCCGAAACCGAGGAATCTCTTCACCGGCGTTAAGATCGGATTCCATTCCCATGATTCTGTTTCGTTCACCATTCTTCGATTTGGGAATTTAGGGCTCGAACCGATGGAGATTTTCTCGTCTGAAACAGGGGAATGGCGGCACTTGGCCTTCAATTTGGCGATGGATTCATTGTTTTTGCCCTTCGAAGGGCCGTCGGCGGTGGTTCTAAACGGGGTGTTTTACTGGCTGGAGTTTCGATCGATGATTTACGCTTTCGATTTGCTAAAAAACGAGTTTCTGAAAGTGGGATTTCCATTTGAGGAACCGGAGTATCGCCGGGAAGTATTCTCCCGTTGCCTCGCCGTCGCGGGTGGGGAGGTGGTGATGGCGTCGACCAACGGCGAGGTTATTGAGATTTGGATTCTTCAGGATAAGGCATCGTCTTTGTGGGGTTTGAAGTGTAGATTAAACGTTGAAAGTCTCGTTGGCATTATCGCAAACACCTTGTGCGCAAGGGCGGCGACGGCGGCGGTTGGGCGGAGAATTGTTGGGATTGTGGGGTTTCAGGCATGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGTAGTGGTTTGTTGTGATATTGGAAGTGGGAAAGTTGAGATTGTTCACCGATTTGACGAGAGCTTGGGATGTACGGATGTTTCTGACTTCATGTTCTTACCTTACGAGATAGAGAAGGCAGCTAGAGAGCTCGTCGACAATGTCGAAGCGAGTATCGGCGGTTATTCTTTGTTGATTGAATCTATCTTAAAATTTGTGGATGATTTCTGTTCTTTATGTGTTGTGGATGAAATTTGGGTTAAGAAAATCTTATTACTCTATAATGCTGGTGTCATCGTGAATCCCAAAGGAGAGATGAAAGGTTCTGCTATAACAGGCCCAATTGGAAAGGAATGTGCGGATCTCTGGCCGAGAATTGCAAGTGCTGCTAATGCTATTATGAAGTTAATTTGTGCCCATGATTTGATTTCTGGTACCGATTCAAAAGTCTCCCTATCAGATTGTCTGCAGGGTAGGGAAGGAAATGATCGGGAGGAAACCTTGTCATTTCTCGGCATTGCAGTGAGGGTCGTGGTTGTGGATATCGGTCCTCTCGGGAATTAA

Protein sequence

MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGSTISKNGVPIHFFPSSLNILNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNPASNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKCRLNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYEIEKAARELVDNVEASIGGYSLLIESILKFVDDFCSLCVVDEIWVKKILLLYNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIMKLICAHDLISGTDSKVSLSDCLQGREGNDREETLSFLGIAVRVVVVDIGPLGN

Homology

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BLAST of Cp4.1LG05g00900 vs. ExPASy Swiss-Prot
Match: P49690 (60S ribosomal protein L23 OS=Arabidopsis thaliana OX=3702 GN=RPL23A PE=2 SV=3)

HSP 1 Score: 83.6 bits (205), Expect = 7.1e-15
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 407 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIM 447
           NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI+
Sbjct: 101 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140

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BLAST of Cp4.1LG05g00900 vs. ExPASy Swiss-Prot
Match: Q07760 (60S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 6.0e-14
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0


Query: 407 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIM 447
           NAGVIVN KGEMKGSAITGPIGKECADLWPRIASAANAI+
Sbjct: 101 NAGVIVNAKGEMKGSAITGPIGKECADLWPRIASAANAIV 140

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BLAST of Cp4.1LG05g00900 vs. ExPASy Swiss-Prot
Match: Q9XEK8 (60S ribosomal protein L23 OS=Syntrichia ruralis OX=38588 GN=RPL23 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.3e-13
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 407 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIM 447
           NAGVIVNPKGEM  SAITGPIGKECADLWPRIASAANAI+
Sbjct: 100 NAGVIVNPKGEMNPSAITGPIGKECADLWPRIASAANAIV 139

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BLAST of Cp4.1LG05g00900 vs. ExPASy Swiss-Prot
Match: P0CT60 (60S ribosomal protein L23-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl2301 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.3e-12
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = 0


Query: 407 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIM 447
           NAGVIVNPKGEMKGSAITGP+ KECADLWPRIAS A  ++
Sbjct: 100 NAGVIVNPKGEMKGSAITGPVAKECADLWPRIASNAGTVV 139

[Close]

BLAST of Cp4.1LG05g00900 vs. ExPASy Swiss-Prot
Match: P0CT61 (60S ribosomal protein L23-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl2302 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.3e-12
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = 0


Query: 407 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIM 447
           NAGVIVNPKGEMKGSAITGP+ KECADLWPRIAS A  ++
Sbjct: 100 NAGVIVNPKGEMKGSAITGPVAKECADLWPRIASNAGTVV 139

[Close]

BLAST of Cp4.1LG05g00900 vs. NCBI nr
Match: XP_022931048.1 (F-box protein At1g52495-like [Cucurbita moschata])

HSP 1 Score: 720 bits (1859), Expect = 9.88e-259
Identity = 353/355 (99.44%), Postives = 353/355 (99.44%), Query Frame = 0


Query: 1   MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 60
           MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF
Sbjct: 50  MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 109

Query: 61  FQGSTISKNGVPIHFFPSSLNILNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNPASNR 120
           FQGSTISKNGVPIHFFPSSLNILNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNP SNR
Sbjct: 110 FQGSTISKNGVPIHFFPSSLNILNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNPTSNR 169

Query: 121 LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDS 180
           LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDS
Sbjct: 170 LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDS 229

Query: 181 LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA 240
           LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA
Sbjct: 230 LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA 289

Query: 241 GGEVVMASTNGEVIEIWILQDKASSLWGLKCRLNVESLVGIIANTLCARAATAAVGRRIV 300
           GGEVVMASTNGEVIEIWILQDKASSLWGLK RLNVESLVGIIANTLCARAATAAVGRRIV
Sbjct: 290 GGEVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIV 349

Query: 301 GIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE 355
           GIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE
Sbjct: 350 GIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE 404

[Close]

BLAST of Cp4.1LG05g00900 vs. NCBI nr
Match: KAG7036294.1 (hypothetical protein SDJN02_03097, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 720 bits (1859), Expect = 9.88e-259
Identity = 353/355 (99.44%), Postives = 353/355 (99.44%), Query Frame = 0


Query: 1   MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 60
           MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF
Sbjct: 50  MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 109

Query: 61  FQGSTISKNGVPIHFFPSSLNILNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNPASNR 120
           FQGSTISKNGVPIHFFPSSLNILNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNP SNR
Sbjct: 110 FQGSTISKNGVPIHFFPSSLNILNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNPTSNR 169

Query: 121 LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDS 180
           LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDS
Sbjct: 170 LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDS 229

Query: 181 LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA 240
           LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA
Sbjct: 230 LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA 289

Query: 241 GGEVVMASTNGEVIEIWILQDKASSLWGLKCRLNVESLVGIIANTLCARAATAAVGRRIV 300
           GGEVVMASTNGEVIEIWILQDKASSLWGLK RLNVESLVGIIANTLCARAATAAVGRRIV
Sbjct: 290 GGEVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIV 349

Query: 301 GIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE 355
           GIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE
Sbjct: 350 GIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE 404

[Close]

BLAST of Cp4.1LG05g00900 vs. NCBI nr
Match: XP_022996333.1 (F-box protein At1g52495-like [Cucurbita maxima])

HSP 1 Score: 715 bits (1845), Expect = 1.34e-256
Identity = 350/355 (98.59%), Postives = 353/355 (99.44%), Query Frame = 0


Query: 1   MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 60
           MAMNSSS+LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF
Sbjct: 50  MAMNSSSHLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 109

Query: 61  FQGSTISKNGVPIHFFPSSLNILNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNPASNR 120
           FQGSTISKNGVPIHFFPSSLNILNTHFYKLI+SSNGLLLCGKSNQNPIVNYSVWNPASNR
Sbjct: 110 FQGSTISKNGVPIHFFPSSLNILNTHFYKLISSSNGLLLCGKSNQNPIVNYSVWNPASNR 169

Query: 121 LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDS 180
           LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLA+DS
Sbjct: 170 LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAIDS 229

Query: 181 LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA 240
           LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA
Sbjct: 230 LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA 289

Query: 241 GGEVVMASTNGEVIEIWILQDKASSLWGLKCRLNVESLVGIIANTLCARAATAAVGRRIV 300
           GGEVVMASTNGEVIEIWILQDKASSLWGLK RLNVESLVGIIANTLCARAATAAVGRRIV
Sbjct: 290 GGEVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIV 349

Query: 301 GIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE 355
           GIVGFQAWDSERIYLNTTEVVVCCDIGS KVEIVHRFDESLGCTDVSDFMFLPYE
Sbjct: 350 GIVGFQAWDSERIYLNTTEVVVCCDIGSAKVEIVHRFDESLGCTDVSDFMFLPYE 404

[Close]

BLAST of Cp4.1LG05g00900 vs. NCBI nr
Match: XP_038888571.1 (putative F-box protein At1g32420 [Benincasa hispida])

HSP 1 Score: 507 bits (1306), Expect = 1.77e-175
Identity = 256/358 (71.51%), Postives = 293/358 (81.84%), Query Frame = 0


Query: 1   MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 60
           MA   ++ L +DI IEIL+HFSLRSLA ANCVSKLWQ+ IST   LLH  +S P+ HGFF
Sbjct: 1   MAEEHNNPLTDDITIEILQHFSLRSLAVANCVSKLWQSFIST-KSLLHTPLSPPIRHGFF 60

Query: 61  FQGSTISKNGVPIHFFPSSLNILN-THF--YKLIASSNGLLLCGKSNQNPIVNYSVWNPA 120
           FQ S I KNGVPIHFFPSS   LN THF   +L+ASSNGLLLCGK NQNPI++YSV+NP+
Sbjct: 61  FQSSHIPKNGVPIHFFPSSPTSLNKTHFPNLRLLASSNGLLLCGKPNQNPIIHYSVFNPS 120

Query: 121 SNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLA 180
           +N+LIPIPKP NL   VKIGFHSH+SV+FTILRF N G+ PMEIF+SETGEWR L F+L 
Sbjct: 121 TNQLIPIPKPTNLIAAVKIGFHSHNSVAFTILRFVNFGIRPMEIFTSETGEWRRLCFDLV 180

Query: 181 MDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCL 240
           +DSLFLPFEGPSA VLNGVFYWLEF S IYAFDLL+NEF ++ FP EE EYRR   SRCL
Sbjct: 181 IDSLFLPFEGPSAAVLNGVFYWLEFDSFIYAFDLLRNEFFEMEFPTEETEYRRNALSRCL 240

Query: 241 AVAGGEVVMASTNGEVIEIWILQDKASSLWGLKCRLNVESLVGIIANTLCARAATAAVGR 300
           AV GG ++MAST+GE +EI +LQD+  S WGLKCRL+VE+LVGI ANTLCA AA AA  R
Sbjct: 241 AVTGGRLLMASTDGEFVEIRVLQDRDCS-WGLKCRLSVETLVGINANTLCATAA-AADRR 300

Query: 301 RIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE 355
           + +GIVGFQ  DSERIYLNTTEVV+CCDI +GKVEIVHRFD SLGCTDVS+F F PYE
Sbjct: 301 KFIGIVGFQGRDSERIYLNTTEVVICCDIETGKVEIVHRFDASLGCTDVSNFRFFPYE 355

[Close]

BLAST of Cp4.1LG05g00900 vs. NCBI nr
Match: KGN58298.1 (hypothetical protein Csa_017498 [Cucumis sativus])

HSP 1 Score: 461 bits (1186), Expect = 2.14e-157
Identity = 232/346 (67.05%), Postives = 272/346 (78.61%), Query Frame = 0


Query: 9   LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGSTISK 68
           +P+DI IEIL++FSLRSLA AN VSKLWQ+ I T  L LH  +S P+ HGFFFQ S I K
Sbjct: 6   IPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPK 65

Query: 69  NGVPIHFFPSS-LNILNTHF--YKLIASSNGLLLCGKSNQNPIVNYSVWNPASNRLIPIP 128
           NG PIHFFPSS  ++  T+F   +L+ASSNGLLLC K NQNPI++YSV+NP++ +LIPIP
Sbjct: 66  NGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIP 125

Query: 129 KPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPF 188
           KP NL + VKIGFHSHDSVSFTILRF N G +PMEIF+SETGEWR L F L MD++F PF
Sbjct: 126 KPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPF 185

Query: 189 EGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVV 248
           EGPSAVVLNGVFYWLEF S IYAFDLL+NEF +VGFP EE EY R V  RCLA+AGG +V
Sbjct: 186 EGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLV 245

Query: 249 MASTNGEVIEIWILQDKASSLWGLKCRLNVESLVGIIANTLCARAATAAVGRRIVGIVGF 308
           MAST+G+V+EI +L+++   LWGLKCRL VES+VGI  N LC     AA   R+VGIVGF
Sbjct: 246 MASTDGKVVEIRVLEER-DCLWGLKCRLRVESVVGINGNRLCE----AAESERLVGIVGF 305

Query: 309 QAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMF 351
           Q  DSERIY+NTTE V+CC +GSGKVEIV+RFD  L   DVS F F
Sbjct: 306 QGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTF 346

[Close]

BLAST of Cp4.1LG05g00900 vs. ExPASy TrEMBL
Match: A0A6J1EX93 (F-box protein At1g52495-like OS=Cucurbita moschata OX=3662 GN=LOC111437357 PE=4 SV=1)

HSP 1 Score: 720 bits (1859), Expect = 4.78e-259
Identity = 353/355 (99.44%), Postives = 353/355 (99.44%), Query Frame = 0


Query: 1   MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 60
           MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF
Sbjct: 50  MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 109

Query: 61  FQGSTISKNGVPIHFFPSSLNILNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNPASNR 120
           FQGSTISKNGVPIHFFPSSLNILNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNP SNR
Sbjct: 110 FQGSTISKNGVPIHFFPSSLNILNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNPTSNR 169

Query: 121 LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDS 180
           LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDS
Sbjct: 170 LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDS 229

Query: 181 LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA 240
           LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA
Sbjct: 230 LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA 289

Query: 241 GGEVVMASTNGEVIEIWILQDKASSLWGLKCRLNVESLVGIIANTLCARAATAAVGRRIV 300
           GGEVVMASTNGEVIEIWILQDKASSLWGLK RLNVESLVGIIANTLCARAATAAVGRRIV
Sbjct: 290 GGEVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIV 349

Query: 301 GIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE 355
           GIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE
Sbjct: 350 GIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE 404

[Close]

BLAST of Cp4.1LG05g00900 vs. ExPASy TrEMBL
Match: A0A6J1KAH8 (F-box protein At1g52495-like OS=Cucurbita maxima OX=3661 GN=LOC111491595 PE=4 SV=1)

HSP 1 Score: 715 bits (1845), Expect = 6.47e-257
Identity = 350/355 (98.59%), Postives = 353/355 (99.44%), Query Frame = 0


Query: 1   MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 60
           MAMNSSS+LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF
Sbjct: 50  MAMNSSSHLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 109

Query: 61  FQGSTISKNGVPIHFFPSSLNILNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNPASNR 120
           FQGSTISKNGVPIHFFPSSLNILNTHFYKLI+SSNGLLLCGKSNQNPIVNYSVWNPASNR
Sbjct: 110 FQGSTISKNGVPIHFFPSSLNILNTHFYKLISSSNGLLLCGKSNQNPIVNYSVWNPASNR 169

Query: 121 LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDS 180
           LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLA+DS
Sbjct: 170 LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAIDS 229

Query: 181 LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA 240
           LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA
Sbjct: 230 LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA 289

Query: 241 GGEVVMASTNGEVIEIWILQDKASSLWGLKCRLNVESLVGIIANTLCARAATAAVGRRIV 300
           GGEVVMASTNGEVIEIWILQDKASSLWGLK RLNVESLVGIIANTLCARAATAAVGRRIV
Sbjct: 290 GGEVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIV 349

Query: 301 GIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE 355
           GIVGFQAWDSERIYLNTTEVVVCCDIGS KVEIVHRFDESLGCTDVSDFMFLPYE
Sbjct: 350 GIVGFQAWDSERIYLNTTEVVVCCDIGSAKVEIVHRFDESLGCTDVSDFMFLPYE 404

[Close]

BLAST of Cp4.1LG05g00900 vs. ExPASy TrEMBL
Match: A0A0A0L8X4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G609260 PE=4 SV=1)

HSP 1 Score: 461 bits (1186), Expect = 1.03e-157
Identity = 232/346 (67.05%), Postives = 272/346 (78.61%), Query Frame = 0


Query: 9   LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGSTISK 68
           +P+DI IEIL++FSLRSLA AN VSKLWQ+ I T  L LH  +S P+ HGFFFQ S I K
Sbjct: 6   IPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPK 65

Query: 69  NGVPIHFFPSS-LNILNTHF--YKLIASSNGLLLCGKSNQNPIVNYSVWNPASNRLIPIP 128
           NG PIHFFPSS  ++  T+F   +L+ASSNGLLLC K NQNPI++YSV+NP++ +LIPIP
Sbjct: 66  NGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIP 125

Query: 129 KPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPF 188
           KP NL + VKIGFHSHDSVSFTILRF N G +PMEIF+SETGEWR L F L MD++F PF
Sbjct: 126 KPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPF 185

Query: 189 EGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVV 248
           EGPSAVVLNGVFYWLEF S IYAFDLL+NEF +VGFP EE EY R V  RCLA+AGG +V
Sbjct: 186 EGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLV 245

Query: 249 MASTNGEVIEIWILQDKASSLWGLKCRLNVESLVGIIANTLCARAATAAVGRRIVGIVGF 308
           MAST+G+V+EI +L+++   LWGLKCRL VES+VGI  N LC     AA   R+VGIVGF
Sbjct: 246 MASTDGKVVEIRVLEER-DCLWGLKCRLRVESVVGINGNRLCE----AAESERLVGIVGF 305

Query: 309 QAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMF 351
           Q  DSERIY+NTTE V+CC +GSGKVEIV+RFD  L   DVS F F
Sbjct: 306 QGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTF 346

[Close]

BLAST of Cp4.1LG05g00900 vs. ExPASy TrEMBL
Match: A0A5A7T3C1 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001460 PE=4 SV=1)

HSP 1 Score: 450 bits (1157), Expect = 3.18e-153
Identity = 230/355 (64.79%), Postives = 272/355 (76.62%), Query Frame = 0


Query: 4   NSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQG 63
           ++S ++P DI IEIL+HFSLRSLA AN VSKLWQ+ + T  L LH   S P+ HGFFFQ 
Sbjct: 16  HNSRFIPHDITIEILQHFSLRSLAIANSVSKLWQSFVFTKSLHLHTPPSPPIRHGFFFQS 75

Query: 64  STISKNGVPIHFFPSS-LNILNTHF--YKLIASSNGLLLCGKSNQNPIVNYSVWNPASNR 123
           S I KNG PIHFFPSS  ++  T F   +L+ASSNGLLLC K NQNP ++YSV+NP++ +
Sbjct: 76  SHIPKNGAPIHFFPSSPTSLTKTRFPNLRLLASSNGLLLCSKPNQNPTIHYSVFNPSTTQ 135

Query: 124 LIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDS 183
           LIPIPKP NL + VKIGFHSHDSVSFTILRF N G +PMEIF+SETGEWR L   L MD+
Sbjct: 136 LIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDLYLDMDT 195

Query: 184 LFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVA 243
           +FLPFEGPSAVVLNGVFYWLEF S IYAFDLL+NEF +VGFP+EE EY R V  RCLA+A
Sbjct: 196 IFLPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPYEETEYGRSVLLRCLAIA 255

Query: 244 GGEVVMASTNGEVIEIWILQDKASSLWGLKCRLNVESLV-GIIANTLCARAATAAVGRRI 303
           G  ++MAST+GEV+EI +L+D+   LWGLKCRL VE +V GI  N+           RR+
Sbjct: 256 GRRLMMASTDGEVVEIRVLEDR-DCLWGLKCRLRVEDVVVGINENS-----------RRL 315

Query: 304 VGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPY 354
           VGIVGF   DSERIYLNTTE V+CCD+GSGKVEIV+RFD  L  T +S+F F PY
Sbjct: 316 VGIVGF---DSERIYLNTTEFVICCDVGSGKVEIVYRFDTILESTHLSNFTFFPY 355

[Close]

BLAST of Cp4.1LG05g00900 vs. ExPASy TrEMBL
Match: M1AM03 (F-box family protein OS=Solanum tuberosum OX=4113 GN=107059680 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 9.14e-26
Identity = 115/390 (29.49%), Postives = 174/390 (44.62%), Query Frame = 0


Query: 9   LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISS-----PLHHGFFFQG 68
           L EDIII+IL     +SLA+  CV K WQ  I+  P L+H+  S      P   GFF+Q 
Sbjct: 15  LSEDIIIDILHRLPSKSLARFECVCKHWQRCIAD-PSLVHSCRSQRWNPHPYMIGFFYQS 74

Query: 69  STISKNGVPIHFF--------------PSSLNILNTHFYKLIASSNGLLLCGKSNQNPIV 128
               +     HFF                S+N L      +IASSNG +L  ++  +  V
Sbjct: 75  RVFVQEFQESHFFFLSTKSSQVIDGSLDESVNFLGRRLC-IIASSNGFILTCENLLHQEV 134

Query: 129 NYSVWNPASNRLIPIPK-PRNLFTGVKIGFH------SHDSVSFTILRFG---NLGLE-P 188
            Y V+NPA+ +   +PK  R+  T   IGFH        D +SFTI+R+    +LG    
Sbjct: 135 YY-VYNPATRQHFSVPKIQRSSITLPAIGFHCKVDDPEKDVISFTIVRYKTWHDLGSSVT 194

Query: 189 MEIFSSETGEWRHLAFNLAMD---SLFLP--FEGPSAVVLNGVFYWLEFRSMIYAFDLLK 248
           +E FSSET  W ++  N+ +D    +FL    +  SA V++GVF W++ +S I  +D + 
Sbjct: 195 IESFSSETNMWSNI--NITLDVPVRVFLNRWMKLASAGVIDGVFCWIDLQSQIIFYDSVN 254

Query: 249 NEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKCRL 308
             F  +    E       ++SRCL V+GG++  AS N   + +W L+    S   +  R 
Sbjct: 255 THFWALQLNQE----MYVLYSRCLGVSGGDLYYASYNEADLTLWYLESNIRSQDAVWVRK 314

Query: 309 NVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEI 363
              +L   + N  C     A      V  V     +   +YL     +V  D+     E+
Sbjct: 315 YTANLTNALVN-YCPGLFQAE-----VMCVDIHPANPHIVYLEINGNIVSYDLEKNIAEL 374

[Close]

BLAST of Cp4.1LG05g00900 vs. TAIR 10
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 83.6 bits (205), Expect = 5.0e-16
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 407 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIM 447
           NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI+
Sbjct: 101 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140

[Close]

BLAST of Cp4.1LG05g00900 vs. TAIR 10
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 83.6 bits (205), Expect = 5.0e-16
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 407 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIM 447
           NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI+
Sbjct: 101 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140

[Close]

BLAST of Cp4.1LG05g00900 vs. TAIR 10
Match: AT3G04400.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 83.6 bits (205), Expect = 5.0e-16
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 407 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIM 447
           NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI+
Sbjct: 101 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140

[Close]

BLAST of Cp4.1LG05g00900 vs. TAIR 10
Match: AT3G04400.2 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 83.6 bits (205), Expect = 5.0e-16
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0


Query: 407 NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIM 447
           NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI+
Sbjct: 86  NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 125

[Close]

BLAST of Cp4.1LG05g00900 vs. TAIR 10
Match: AT3G16210.1 (F-box family protein )

HSP 1 Score: 60.8 bits (146), Expect = 3.5e-09
Identity = 68/286 (23.78%), Postives = 115/286 (40.21%), Query Frame = 0


Query: 6   SSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGST 65
           S +LPE++ IEIL   S++ LA+  CV K W+  I+           SP     F+  + 
Sbjct: 2   SKFLPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMSPAKFVSFYDKNF 61

Query: 66  ISKNGVPIHFFPSSLNILNTHF-YKLIASSNGLLLCGKSNQNPIVNYS--VWNPASNRLI 125
              +    H  P   N L+      +I  S  +L C  +    + N++  VWNP S +  
Sbjct: 62  YMLDVEGKH--PVITNKLDFPLDQSMIDESTCVLHCDGTLCVTLKNHTLMVWNPFSKQFK 121

Query: 126 PIPKPRNLFTGVKIGFHSHDSV--SFTILRF-GNLGLEPMEIFSSETGEWRHLAFNLAMD 185
            +P P        +GF  +D V   + ++ F   L +    +F   TG W     +L + 
Sbjct: 122 IVPNPGIYQDSNILGF-GYDPVHDDYKVVTFIDRLDVSTAHVFEFRTGSWGE---SLRIS 181

Query: 186 SLFLPFEGPSAVVLNGVFYWLEFRS----MIYAFDLLKNEFLKVGFPFEEPEYRREVFSR 245
                +       L+   YW+ +RS     I  F+L  +E+ K+  P     Y + V S 
Sbjct: 182 YPDWHYRDRRGTFLDQYLYWIAYRSSADRFILCFNLSTHEYRKLPLPV----YNQGVTSS 241

Query: 246 CLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKCRLNVESLVGI 282
            L V   ++ +        EI I   + +  W     L++ S + +
Sbjct: 242 WLGVTSQKLCITEYEMCKKEIRISVMEKTGSWSKIISLSMSSFISV 277

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g00900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49690	7.1e-15	97.50	60S ribosomal protein L23 OS=Arabidopsis thaliana OX=3702 GN=RPL23A PE=2 SV=3	[more]
Q07760	6.0e-14	95.00	60S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1	[more]
Q9XEK8	2.3e-13	92.50	60S ribosomal protein L23 OS=Syntrichia ruralis OX=38588 GN=RPL23 PE=2 SV=1	[more]
P0CT60	4.3e-12	82.50	60S ribosomal protein L23-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484...	[more]
P0CT61	4.3e-12	82.50	60S ribosomal protein L23-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484...	[more]

BLAST of Cp4.1LG05g00900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931048.1	9.88e-259	99.44	F-box protein At1g52495-like [Cucurbita moschata]	[more]
KAG7036294.1	9.88e-259	99.44	hypothetical protein SDJN02_03097, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022996333.1	1.34e-256	98.59	F-box protein At1g52495-like [Cucurbita maxima]	[more]
XP_038888571.1	1.77e-175	71.51	putative F-box protein At1g32420 [Benincasa hispida]	[more]
KGN58298.1	2.14e-157	67.05	hypothetical protein Csa_017498 [Cucumis sativus]	[more]

BLAST of Cp4.1LG05g00900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EX93	4.78e-259	99.44	F-box protein At1g52495-like OS=Cucurbita moschata OX=3662 GN=LOC111437357 PE=4 ...	[more]
A0A6J1KAH8	6.47e-257	98.59	F-box protein At1g52495-like OS=Cucurbita maxima OX=3661 GN=LOC111491595 PE=4 SV...	[more]
A0A0A0L8X4	1.03e-157	67.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G609260 PE=4 SV=1	[more]
A0A5A7T3C1	3.18e-153	64.79	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001460 ...	[more]
M1AM03	9.14e-26	29.49	F-box family protein OS=Solanum tuberosum OX=4113 GN=107059680 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g00900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04480.1	5.0e-16	97.50	Ribosomal protein L14p/L23e family protein	[more]
AT2G33370.1	5.0e-16	97.50	Ribosomal protein L14p/L23e family protein	[more]
AT3G04400.1	5.0e-16	97.50	Ribosomal protein L14p/L23e family protein	[more]
AT3G04400.2	5.0e-16	97.50	Ribosomal protein L14p/L23e family protein	[more]
AT3G16210.1	3.5e-09	23.78	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 95..275 e-value: 1.9E-13 score: 48.3
IPR036853	Ribosomal protein L14 superfamily	GENE3D	2.40.150.20	Ribosomal protein L14	coord: 401..446 e-value: 9.9E-10 score: 40.2
IPR036853	Ribosomal protein L14 superfamily	SUPERFAMILY	50193	Ribosomal protein L14	coord: 407..445
None	No IPR available	GENE3D	1.20.1280.50		coord: 2..44 e-value: 2.1E-5 score: 26.2
None	No IPR available	PANTHER	PTHR35546:SF30	SUBFAMILY NOT NAMED	coord: 5..357
None	No IPR available	PANTHER	PTHR35546	F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED	coord: 5..357
IPR000218	Ribosomal protein L14P	PFAM	PF00238	Ribosomal_L14	coord: 407..445 e-value: 2.8E-6 score: 27.3
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 8..46 e-value: 2.1E-4 score: 21.1
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 97..315
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 3..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g00900.1	Cp4.1LG05g00900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003735	structural constituent of ribosome