Cp4.1LG05g00880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g00880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	tetraspanin-20-like
Location	Cp4.1LG05: 504243 .. 508215 (-)
RNA-Seq Expression	Cp4.1LG05g00880
Synteny	Cp4.1LG05g00880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAAATAAGTTTTAATATATATTAAACCATAATTAGCATATATTTGTTATACTAAAAAAAAAATTATATATATTTGTTGCCATTAATCCCTCTCGGACCTTTTTCTTTTTCTTGCTTTACGAACACTTTCTGTTTGTTCATACTAAAGTTACCCATTTTTGAACCCGACGCCGTGAATCCGGACTAGGGTTCGAAATCCCAGACCTTCAAATTCCTGTTAGACCAAGACCCACGAACGAAAAATGGCTCGCACTTGTTGTCATGTTTCTCTTGCTTTCATCCTGAAATGCTTTAATTTTCTTCAAGCTTTTGTTGGGATTTCGATTATTGTTTATTCCGCATGGATGCTCGATCGGTGGAATCATCAAGTTCCTGTATCTCCTCCGCCTTCTCCTGTACCGGCGTTGGCTCCTTCTCCGGCTTCTTCTGCTTCGTTTTATTTGAATTCTGAATCAGTCTCTCTTGCCGATCGGATCACCGCCGCGAATTTAGGTGTCGATTTGATTCCCGAGCTCGGGACGGATTTAGAGCTTGATTTGAATGCGTTTAAGCTTCCGGCTCCTTGGTGAGATTTATTTGAATTTGTGTGGTCGGGCTTTGATGTGAAGTTTTCGATTCCTTGTGTTTCTTGCGACTCTTAATTAGAAGATTTGAAAATTCGTGTTGCGCATTTATGAAATGGGACAGGTTTTGTAATCAATGGTCGAAATCCTTCAAAATTATATTAACTTCGTTCTGTATTTTAATTCGTTGGAATTTTCCTTGGATACTCTCTCACTGTTGCTGCCTTTTCTGTTGATTATTCCCCAACAATCATTTGAGTTTGAAATTTAGTTCTGGATGAGTTTGAAGGAATTTAGACTTCAATAGCGTCAGTTTTACCCTTCATTTTTGGTGATGGAATATTGTGAACATGGATTTTGCTACAGTCTTGTCCCGAATGATTCTCTTTCTGTATAGTAATTTGGTAGTTTTTTAAGATATGAAGCTCTTAATTTTATCCTGATTTATCATTATGATCATTGCTGCATATTGGGTTCATATGATTGTCAGGTTCATCTACTCATTCATGGGATTGGGCATCTTGTTGTGTTCTACCACTTTAGTTGGCTGCATTGCAGCTGAAGCAATAAGTGGCTGCTGCCTCTGTTTTGTATCCTACTATTTTCAGTCTATTACAGCTTGTTTCTCACTTCTAGATATTGCAATTTTTTTTCTGTGAAGTTACTATTTTGGGCAATAGTCGGAGTCTTGTCCTCAATTTCATGAGGACTAATAGAAACATGCTACAGGAACTCTGTTAGAATTTACTAATCCTATTTCGTAGAACATATGTTTGGAAGAATTGCATTTTTTTTTCCTGTGGAGTTACTATTCAACCTATAGAACTACAACAACTCAAGCCTACCACTAGCATATATTCTCCGTTCTGACCCCTTACGTATCACTGTAAGCCTTACGATTTTAAAACGCGTCTACTAAGAAGAGGTTTTCAAACCCTTATAAGGAACGTAAGATGGCTTTCCCTTAACCTAGCAATACTAGTACAACATGCTCATAATACTGTTTATTCTCGTGGAAGTGGCTTTGGTATCATTTATTGCAATTGATCGCCGGTGGGAAAAGGTATTCTTCTGCACTTGAAAGCAAATTTACATGTGCATATGCATCTATTGATATGTGTTTACCTGAAAACAATGATGCAGGATCTTCCATTTGACCCAACGGGTGAACTCGATGGACTCAGGCAATTCATTGAAGACAACGTCGATCTGTGCAAGTGGATCGGTATCATCGTGATTTCAACGCAGGTAGAATTGATGGAATTAATCATCTATCCCTTCGCTCGTTTCTGATTGCATTCTGTTGTTGAGTATTAAATGTGCAGATTGAGTATCGTTAAGATGAACCTCATTTTTTGGTTTTCCCCTCCCAAATGCATAATGGACCTTTTTTTGAAGTCATGTGTTTTATTCAGCAAACGAGCAAAATAGCAAGCATGTGAATCATATGTTGTTGTCTTATAAAGTTGTGAATCCTCAGTATAGTTGCTCGGGTAAACTGACTCGGCGCTTCCCTTCTGGCAGTTTGATCTCTTTTATCCATTGCAACGGTGGCTTACGTTGCTCGTTTTTTGCAGTCTACCAAAGTTTATAGTGTAACCTCTCAGGTTCTATTTGATTATACTTTGTTATGGTCATTCACTTTAGTCCTTCATGCGACCTCTCAGGCATTGTCTCTACTGTTAGCAATCATTCTGAGATCCATGGTTTCAACCCGTAAAACTGAGTACGATACCAACGAGGAGATCGGTGATCAAGACAGAATTCGGGAAACATTGCTTAATCCACCTGCAAATCAAGCTTCTGGTGCTAAATTTGCCCTTTGGGGTGCACGCATGAGAGAGAAGGTATCACATTAAACCTTGCCCTATTCTTCTCTTTTAGCAAAGAGGAGGCATACAAAATCTGTGTCTAAATGTAGTCTCCATCCTTTTCATTGCAGTATGGATTGAAAAACAGTGACTGATATAGTTCATCAAACCAGAGTTCGTAAATAAATATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCGAAACAGAAGGTCTTCCTCGAGCAGGTCAGAGAAACTCAAACCAGTCATTGGTGTGTGTAAGTTTCTGTTCTGCTATATTGTGTGCTTTGATTTGGGTTGGTCTGATAGGATAGATTGCAATCAGCTTTGTGAAAGAACGGAAGGTTCTGGTGTGTATATCATCAAGTTGAGGAATTTGAATAAGTTCTACTTTTCCATTCTACTCTTCTAAATTTGATATGATGTTAACCAAAGGTGTGAGCTCTTATAAATTCTACATTTAGTTCTTATAAGATATTAAAGTTATGATCACTCATTTGAATCTATTTTTCGACTAATCTTACGAAATAACTGGTTAACCTTACTGCATTTAATTGTCAAAGCAATGGTAACAATCTTTTCATTCTTTTTTTCTAATCTAGTCTAATACTTTAAGAACTTTGCATGAATCAAAAACAAAAGCAAAGAAATCAAAATAGAGAGATTTCACTTCTATTTATACGCCATATATTTTCACAAAATGAATATCAGAGGTAAGTAGGCAGACTTATCTGGACATACACAATAAATCACAGGACCATCATTTATTGAATGTCAGAGACAAAGGTGGGAGATAATGAATTAATCTAAAACAAAACAGAATTGCAAATTTTAATCACACTTACCTGTCAATTGAACTACAGCCTCTTCCAAAAGCTCTTCCAGCAATCTCCTTTCTACTTCCTTTCCCAAATTATCCATTTCCATCATAAGATGATCATCCCAATATTTTCCCCCCACCTCTTTTCTGACTACCCTTTCCACTACCAGGCTGTTGCTGTCACCAATTTCTCCGGTAACACATCTAGATTCACCACAAACCCAGTCCTTCAGTTTACCCATAACACAGTCCAATAATGTTAGTGGTGTGCCCTCAGTGAAACTGCTGTCATGGGCTCTGCTAGATGTTTCCGCACTTCGTCTGTGGTCGAGTTCCTGACTTGTTATATCAATCAAGGCAGCATTCACACAGTCAAATACAAGCTTCCTACTTGATCGTAACTGCCTTCGCTTGGCCTCGAGCATTGGCTCTTTGTTGCTTAGATTTGCATATTTGTCTCTTAGAGATGGATCTAGTGGATTTACAAGTGAATGCCATCTTGTAAACAAAAAGCCACATTGTTGTACTTCACTACTGAGATCAGACATTGTAAGAAGGGCTTCCACAAGGCAATGCCAGTTTTGTTCTTCCTCCAAACAAGTGGAAACTGGTGAAGATTTGAGTGCATAGGAAGCAAACGAATCTGAATAAGAATCACCCCAGAATATACTCCGAGCAACTGATTCTATGGGTGGCGATTTGTCAATGAGGCTATTCTTGAATGGTGTACAGA

mRNA sequence

ATTAAAATAAGTTTTAATATATATTAAACCATAATTAGCATATATTTGTTATACTAAAAAAAAAATTATATATATTTGTTGCCATTAATCCCTCTCGGACCTTTTTCTTTTTCTTGCTTTACGAACACTTTCTGTTTGTTCATACTAAAGTTACCCATTTTTGAACCCGACGCCGTGAATCCGGACTAGGGTTCGAAATCCCAGACCTTCAAATTCCTGTTAGACCAAGACCCACGAACGAAAAATGGCTCGCACTTGTTGTCATGTTTCTCTTGCTTTCATCCTGAAATGCTTTAATTTTCTTCAAGCTTTTGTTGGGATTTCGATTATTGTTTATTCCGCATGGATGCTCGATCGGTGGAATCATCAAGTTCCTGTATCTCCTCCGCCTTCTCCTGTACCGGCGTTGGCTCCTTCTCCGGCTTCTTCTGCTTCGTTTTATTTGAATTCTGAATCAGTCTCTCTTGCCGATCGGATCACCGCCGCGAATTTAGGTGTCGATTTGATTCCCGAGCTCGGGACGGATTTAGAGCTTGATTTGAATGCGTTTAAGCTTCCGGCTCCTTGGTTCATCTACTCATTCATGGGATTGGGCATCTTGTTGTGTTCTACCACTTTAGTTGGCTGCATTGCAGCTGAAGCAATAAGTGGCTGCTGCCTCTGTTTTGATCTTCCATTTGACCCAACGGGTGAACTCGATGGACTCAGGCAATTCATTGAAGACAACGTCGATCTGTGCAAGTGGATCGGTATCATCGTGATTTCAACGCAGGCATTGTCTCTACTGTTAGCAATCATTCTGAGATCCATGGTTTCAACCCGTAAAACTGAGTACGATACCAACGAGGAGATCGGTGATCAAGACAGAATTCGGGAAACATTGCTTAATCCACCTGCAAATCAAGCTTCTGGTGCTAAATTTGCCCTTTGGGGTGCACGCATGAGAGAGAAGTATGGATTGAAAAACAGTGACTGATATAGTTCATCAAACCAGAGTTCGTAAATAAATATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCGAAACAGAAGGTCTTCCTCGAGCAGGTCAGAGAAACTCAAACCAGTCATTGGTGTGTGTAAGTTTCTGTTCTGCTATATTGTGTGCTTTGATTTGGGTTGGTCTGATAGGATAGATTGCAATCAGCTTTGTGAAAGAACGGAAGGTTCTGGTGTGTATATCATCAAGTTGAGGAATTTGAATAAGTTCTACTTTTCCATTCTACTCTTCTAAATTTGATATGATGTTAACCAAAGGTGTGAGCTCTTATAAATTCTACATTTAGTTCTTATAAGATATTAAAGTTATGATCACTCATTTGAATCTATTTTTCGACTAATCTTACGAAATAACTGGTTAACCTTACTGCATTTAATTGTCAAAGCAATGGTAACAATCTTTTCATTCTTTTTTTCTAATCTAGTCTAATACTTTAAGAACTTTGCATGAATCAAAAACAAAAGCAAAGAAATCAAAATAGAGAGATTTCACTTCTATTTATACGCCATATATTTTCACAAAATGAATATCAGAGGTAAGTAGGCAGACTTATCTGGACATACACAATAAATCACAGGACCATCATTTATTGAATGTCAGAGACAAAGGTGGGAGATAATGAATTAATCTAAAACAAAACAGAATTGCAAATTTTAATCACACTTACCTGTCAATTGAACTACAGCCTCTTCCAAAAGCTCTTCCAGCAATCTCCTTTCTACTTCCTTTCCCAAATTATCCATTTCCATCATAAGATGATCATCCCAATATTTTCCCCCCACCTCTTTTCTGACTACCCTTTCCACTACCAGGCTGTTGCTGTCACCAATTTCTCCGGTAACACATCTAGATTCACCACAAACCCAGTCCTTCAGTTTACCCATAACACAGTCCAATAATGTTAGTGGTGTGCCCTCAGTGAAACTGCTGTCATGGGCTCTGCTAGATGTTTCCGCACTTCGTCTGTGGTCGAGTTCCTGACTTGTTATATCAATCAAGGCAGCATTCACACAGTCAAATACAAGCTTCCTACTTGATCGTAACTGCCTTCGCTTGGCCTCGAGCATTGGCTCTTTGTTGCTTAGATTTGCATATTTGTCTCTTAGAGATGGATCTAGTGGATTTACAAGTGAATGCCATCTTGTAAACAAAAAGCCACATTGTTGTACTTCACTACTGAGATCAGACATTGTAAGAAGGGCTTCCACAAGGCAATGCCAGTTTTGTTCTTCCTCCAAACAAGTGGAAACTGGTGAAGATTTGAGTGCATAGGAAGCAAACGAATCTGAATAAGAATCACCCCAGAATATACTCCGAGCAACTGATTCTATGGGTGGCGATTTGTCAATGAGGCTATTCTTGAATGGTGTACAGA

Coding sequence (CDS)

ATGGCTCGCACTTGTTGTCATGTTTCTCTTGCTTTCATCCTGAAATGCTTTAATTTTCTTCAAGCTTTTGTTGGGATTTCGATTATTGTTTATTCCGCATGGATGCTCGATCGGTGGAATCATCAAGTTCCTGTATCTCCTCCGCCTTCTCCTGTACCGGCGTTGGCTCCTTCTCCGGCTTCTTCTGCTTCGTTTTATTTGAATTCTGAATCAGTCTCTCTTGCCGATCGGATCACCGCCGCGAATTTAGGTGTCGATTTGATTCCCGAGCTCGGGACGGATTTAGAGCTTGATTTGAATGCGTTTAAGCTTCCGGCTCCTTGGTTCATCTACTCATTCATGGGATTGGGCATCTTGTTGTGTTCTACCACTTTAGTTGGCTGCATTGCAGCTGAAGCAATAAGTGGCTGCTGCCTCTGTTTTGATCTTCCATTTGACCCAACGGGTGAACTCGATGGACTCAGGCAATTCATTGAAGACAACGTCGATCTGTGCAAGTGGATCGGTATCATCGTGATTTCAACGCAGGCATTGTCTCTACTGTTAGCAATCATTCTGAGATCCATGGTTTCAACCCGTAAAACTGAGTACGATACCAACGAGGAGATCGGTGATCAAGACAGAATTCGGGAAACATTGCTTAATCCACCTGCAAATCAAGCTTCTGGTGCTAAATTTGCCCTTTGGGGTGCACGCATGAGAGAGAAGTATGGATTGAAAAACAGTGACTGA

Protein sequence

MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPASSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILLCSTTLVGCIAAEAISGCCLCFDLPFDPTGELDGLRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETLLNPPANQASGAKFALWGARMREKYGLKNSD

Homology

[Close]

BLAST of Cp4.1LG05g00880 vs. ExPASy Swiss-Prot
Match: Q9SVU4 (Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.4e-63
Identity = 139/277 (50.18%), Postives = 176/277 (63.54%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           M   CCHVS A ILK  NFLQAF+GISII+YS WMLD++NH VPV PPPS  PA A SP 
Sbjct: 1   MRHNCCHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPA-ASSPD 60

Query: 61  SSASF-----YLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMG 120
           SS SF      +NS S SL + I   + G+ ++   G D   +L +  LPAPWFIY FM 
Sbjct: 61  SSYSFSNSIIEINSVSDSLKNPIDFVS-GI-VLGSGGGDSGFNLRSLDLPAPWFIYCFMA 120

Query: 121 LGILLCSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPT 180
           +GIL+C  T++G IAAEAI+GCCLCF                           DLP+DPT
Sbjct: 121 IGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPT 180

Query: 181 GELDGLRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEI-GDQD 240
           GEL+ LR FIE+N+D+CKW+GI+V++ Q LSLLLA++LR+MVS R++E D  ++      
Sbjct: 181 GELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMS 240

Query: 241 RIRETLLNPPANQASGAKFAL--WGARMREKYGLKNS 243
           R R+ LL P ANQ S     +  W +R+REKYGL NS
Sbjct: 241 RARDNLLGPQANQTSSGSSNIDNWRSRIREKYGLINS 274

[Close]

BLAST of Cp4.1LG05g00880 vs. ExPASy Swiss-Prot
Match: Q93XY5 (Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.1e-56
Identity = 125/272 (45.96%), Postives = 159/272 (58.46%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           M R CCHVS A  LK  NF+QAF+G+SII+YS WML  ++  +PV PPPS   +     A
Sbjct: 1   MRRNCCHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIA 60

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
           +S S  L +    +A  I  +N         G D   +L +  LPAPWFIYSFM +GIL+
Sbjct: 61  TSVSEPLKNPIDFVASIILGSN---------GGDHGFNLRSLDLPAPWFIYSFMAVGILV 120

Query: 121 CSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGELDG 180
           C  T +G IAAEAI+GCCLCF                           DLP+DPTGEL  
Sbjct: 121 CIVTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSS 180

Query: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNE-EIGDQDRIRET 240
           LR FIE+N+D+CKW+GI V++ Q LSLLLA++LR+MVST K E D  E +   + R  + 
Sbjct: 181 LRAFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDENPRSRTWDP 240

Query: 241 LLNPPANQ--ASGAKFALWGARMREKYGLKNS 243
           LL P  NQ  A  +K   W +R+REKYGL  S
Sbjct: 241 LLGPQGNQAPAGSSKIENWSSRIREKYGLNQS 263

[Close]

BLAST of Cp4.1LG05g00880 vs. ExPASy Swiss-Prot
Match: Q940P5 (Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.5e-18
Identity = 70/265 (26.42%), Postives = 109/265 (41.13%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           + R+C    L  +LK  N L   VGI++I+Y+ W++ +W  Q+   P             
Sbjct: 4   IVRSC----LQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLP------------- 63

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
                + +S+                                  P PWFIYSF+GLG +L
Sbjct: 64  -----FADSDH---------------------------------PVPWFIYSFLGLGAIL 123

Query: 121 CSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGELDG 180
           C  T  G IAAE ++GCCL                             D P DP+G    
Sbjct: 124 CVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQ 183

Query: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEE--IGDQDRIRE 234
             +FIE N  +CKWIG+ ++  Q LS+L+A++L+++       YD+++E  +     +++
Sbjct: 184 FSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQD 213

[Close]

BLAST of Cp4.1LG05g00880 vs. ExPASy Swiss-Prot
Match: Q9C5W7 (Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.9e-15
Identity = 72/278 (25.90%), Postives = 117/278 (42.09%), Query Frame = 0


Query: 6   CHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPASSASF 65
           C   L  +LK  NFL A  G+ +I Y  ++   +                     +S +F
Sbjct: 3   CRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTD----------------NSVTF 62

Query: 66  YLNSESVSLADRITAANLGVDLIPELGTDLELDLNAF-KLPAPWFIYSFMGLGILLCSTT 125
            L +   S        + G  ++      + L  N F  LP  WFIY F+G+G+ L   +
Sbjct: 63  DLTNGDQSY------VSFGRPIL----MAVSLSSNIFDNLPKAWFIYLFIGIGVALFVIS 122

Query: 126 LVGCIAAEAISGCCL-CF--------------------------DLPFDPTGELDGLRQF 185
             GC+   + S CCL C+                          +LP D TG  D +  F
Sbjct: 123 CCGCVGTCSRSVCCLSCYSLLLILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNF 182

Query: 186 IEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEE-IGDQDRIRETLLNP 244
           + +N  + +W+ +  +  +AL  LLA+++R+  +    EYD+++E +  + +IR+  +N 
Sbjct: 183 LRENWKIVRWVALGAVVFEALLFLLALMVRA--ANTPAEYDSDDEYLAPRQQIRQPFINR 242

[Close]

BLAST of Cp4.1LG05g00880 vs. NCBI nr
Match: XP_023533047.1 (tetraspanin-20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 473 bits (1216), Expect = 2.03e-167
Identity = 243/270 (90.00%), Postives = 243/270 (90.00%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
           SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL
Sbjct: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120

Query: 121 CSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGELDG 180
           CSTTLVGCIAAEAISGCCLCF                           DLPFDPTGELDG
Sbjct: 121 CSTTLVGCIAAEAISGCCLCFYNMLIILFILVEVALVSFIAIDRRWEKDLPFDPTGELDG 180

Query: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL 240
           LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL
Sbjct: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL 240

Query: 241 LNPPANQASGAKFALWGARMREKYGLKNSD 243
           LNPPANQASGAKFALWGARMREKYGLKNSD
Sbjct: 241 LNPPANQASGAKFALWGARMREKYGLKNSD 270

[Close]

BLAST of Cp4.1LG05g00880 vs. NCBI nr
Match: XP_022931236.1 (tetraspanin-20-like [Cucurbita moschata] >XP_022931237.1 tetraspanin-20-like [Cucurbita moschata])

HSP 1 Score: 464 bits (1193), Expect = 6.52e-164
Identity = 238/270 (88.15%), Postives = 241/270 (89.26%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
           SSASFYLNSESVSLADRITAANL  DLIPELGTDLELDLNAFKLPAPWFIYSFMGLGI+L
Sbjct: 61  SSASFYLNSESVSLADRITAANLAGDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGIML 120

Query: 121 CSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGELDG 180
           CSTTLVGCIAAEAISGCCLCF                           DLPFDPTGELDG
Sbjct: 121 CSTTLVGCIAAEAISGCCLCFYNMLIILFILVEVALVSFIAIDRRWEKDLPFDPTGELDG 180

Query: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL 240
           LR+FIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL
Sbjct: 181 LRKFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL 240

Query: 241 LNPPANQASGAKFALWGARMREKYGLKNSD 243
           LNPPANQASGAKFALWGARMREKYGLKNS+
Sbjct: 241 LNPPANQASGAKFALWGARMREKYGLKNSE 270

[Close]

BLAST of Cp4.1LG05g00880 vs. NCBI nr
Match: KAG6606336.1 (Tetraspanin-18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 459 bits (1180), Expect = 6.24e-162
Identity = 236/270 (87.41%), Postives = 240/270 (88.89%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
           SSASFYLNSESVSLADRITAANL  DLI ELGTDLELDLNAFKLPAPWFIYSFMGLGI+L
Sbjct: 61  SSASFYLNSESVSLADRITAANLAGDLISELGTDLELDLNAFKLPAPWFIYSFMGLGIML 120

Query: 121 CSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGELDG 180
           CSTTLVGCIAAEAISGCCLCF                           DLPFDPTGEL+G
Sbjct: 121 CSTTLVGCIAAEAISGCCLCFYNMLIILFILVEVALVSFIAIDRRWEKDLPFDPTGELNG 180

Query: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL 240
           LR+FIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL
Sbjct: 181 LRKFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL 240

Query: 241 LNPPANQASGAKFALWGARMREKYGLKNSD 243
           LNPPANQASGAKFALWGARMREKYGLKNS+
Sbjct: 241 LNPPANQASGAKFALWGARMREKYGLKNSE 270

[Close]

BLAST of Cp4.1LG05g00880 vs. NCBI nr
Match: XP_022995305.1 (tetraspanin-20 [Cucurbita maxima])

HSP 1 Score: 452 bits (1163), Expect = 2.43e-159
Identity = 234/270 (86.67%), Postives = 237/270 (87.78%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDR NHQVPVSPPPSPVPALAPS A
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRRNHQVPVSPPPSPVPALAPSTA 60

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
           SSASFYLNSESVSLADRITA NL  DLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL
Sbjct: 61  SSASFYLNSESVSLADRITAVNLAADLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120

Query: 121 CSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGELDG 180
           CSTTLVGCIAAEAISGCCLCF                           DLPFDPTGELDG
Sbjct: 121 CSTTLVGCIAAEAISGCCLCFYNMLIILFILVEVALVSFIAIDRRWEKDLPFDPTGELDG 180

Query: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL 240
           LRQFIEDNVDLCKWIGIIVI+TQALSLLLAIILRSMVSTRKTEY+TNEEIGDQDRIRETL
Sbjct: 181 LRQFIEDNVDLCKWIGIIVIATQALSLLLAIILRSMVSTRKTEYNTNEEIGDQDRIRETL 240

Query: 241 LNPPANQASGAKFALWGARMREKYGLKNSD 243
           LNPPANQASGA FALWGARMREKYGLKNS+
Sbjct: 241 LNPPANQASGANFALWGARMREKYGLKNSE 270

[Close]

BLAST of Cp4.1LG05g00880 vs. NCBI nr
Match: KAG7036276.1 (Tetraspanin-18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 450 bits (1158), Expect = 7.07e-159
Identity = 231/251 (92.03%), Postives = 234/251 (93.23%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
           SSASFYLNSESVSLADRITAANL  DLIPELGTDLELDLNAFKLPAPWFIYSFMGLGI+L
Sbjct: 61  SSASFYLNSESVSLADRITAANLAGDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGIML 120

Query: 121 CSTTLVGCIAAEAISGCCLCF--------DLPFDPTGELDGLRQFIEDNVDLCKWIGIIV 180
           CSTTLVGCIAAEAI               DLPFDPTGELDGLR+FIEDNVDLCKWIGIIV
Sbjct: 121 CSTTLVGCIAAEAIMALVSFIAIDRRWEKDLPFDPTGELDGLRKFIEDNVDLCKWIGIIV 180

Query: 181 ISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETLLNPPANQASGAKFALWGAR 240
           ISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETLLNPPANQASGAKFALWGAR
Sbjct: 181 ISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETLLNPPANQASGAKFALWGAR 240

Query: 241 MREKYGLKNSD 243
           MREKYGLKNS+
Sbjct: 241 MREKYGLKNSE 251

[Close]

BLAST of Cp4.1LG05g00880 vs. ExPASy TrEMBL
Match: A0A6J1ET48 (tetraspanin-20-like OS=Cucurbita moschata OX=3662 GN=LOC111437473 PE=4 SV=1)

HSP 1 Score: 464 bits (1193), Expect = 3.15e-164
Identity = 238/270 (88.15%), Postives = 241/270 (89.26%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
           SSASFYLNSESVSLADRITAANL  DLIPELGTDLELDLNAFKLPAPWFIYSFMGLGI+L
Sbjct: 61  SSASFYLNSESVSLADRITAANLAGDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGIML 120

Query: 121 CSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGELDG 180
           CSTTLVGCIAAEAISGCCLCF                           DLPFDPTGELDG
Sbjct: 121 CSTTLVGCIAAEAISGCCLCFYNMLIILFILVEVALVSFIAIDRRWEKDLPFDPTGELDG 180

Query: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL 240
           LR+FIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL
Sbjct: 181 LRKFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL 240

Query: 241 LNPPANQASGAKFALWGARMREKYGLKNSD 243
           LNPPANQASGAKFALWGARMREKYGLKNS+
Sbjct: 241 LNPPANQASGAKFALWGARMREKYGLKNSE 270

[Close]

BLAST of Cp4.1LG05g00880 vs. ExPASy TrEMBL
Match: A0A6J1K3Q7 (tetraspanin-20 OS=Cucurbita maxima OX=3661 GN=LOC111490887 PE=4 SV=1)

HSP 1 Score: 452 bits (1163), Expect = 1.18e-159
Identity = 234/270 (86.67%), Postives = 237/270 (87.78%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDR NHQVPVSPPPSPVPALAPS A
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRRNHQVPVSPPPSPVPALAPSTA 60

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
           SSASFYLNSESVSLADRITA NL  DLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL
Sbjct: 61  SSASFYLNSESVSLADRITAVNLAADLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120

Query: 121 CSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGELDG 180
           CSTTLVGCIAAEAISGCCLCF                           DLPFDPTGELDG
Sbjct: 121 CSTTLVGCIAAEAISGCCLCFYNMLIILFILVEVALVSFIAIDRRWEKDLPFDPTGELDG 180

Query: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL 240
           LRQFIEDNVDLCKWIGIIVI+TQALSLLLAIILRSMVSTRKTEY+TNEEIGDQDRIRETL
Sbjct: 181 LRQFIEDNVDLCKWIGIIVIATQALSLLLAIILRSMVSTRKTEYNTNEEIGDQDRIRETL 240

Query: 241 LNPPANQASGAKFALWGARMREKYGLKNSD 243
           LNPPANQASGA FALWGARMREKYGLKNS+
Sbjct: 241 LNPPANQASGANFALWGARMREKYGLKNSE 270

[Close]

BLAST of Cp4.1LG05g00880 vs. ExPASy TrEMBL
Match: A0A6J1HHZ4 (tetraspanin-20-like OS=Cucurbita moschata OX=3662 GN=LOC111463811 PE=4 SV=1)

HSP 1 Score: 399 bits (1026), Expect = 1.08e-138
Identity = 205/270 (75.93%), Postives = 217/270 (80.37%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           MARTCCHVSLAFI+KCFNFLQAFVG+SIIVYSAWMLDRWNH +PVSPPPSP+PALAPSPA
Sbjct: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
           S   FYL+SESV++ADRI   NL  DLIP   T+LE+DLNAFKLPAPWFIYSFMGLGILL
Sbjct: 61  S---FYLSSESVAVADRIMPINLAADLIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILL 120

Query: 121 CSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGELDG 180
           C   LVGCIAAEAISGCCLCF                           DLP DPTGEL  
Sbjct: 121 CCIALVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIGIDRRWEKDLPLDPTGELKE 180

Query: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL 240
           LRQFIEDN+D+CKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDT EEIG +DR RE L
Sbjct: 181 LRQFIEDNIDVCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGVRDRTREPL 240

Query: 241 LNPPANQASGAKFALWGARMREKYGLKNSD 243
           LNPP NQASGA F LWGARMREKYGL NSD
Sbjct: 241 LNPPGNQASGAHFDLWGARMREKYGLNNSD 267

[Close]

BLAST of Cp4.1LG05g00880 vs. ExPASy TrEMBL
Match: A0A6J1HWE7 (tetraspanin-20-like OS=Cucurbita maxima OX=3661 GN=LOC111466873 PE=4 SV=1)

HSP 1 Score: 398 bits (1023), Expect = 3.09e-138
Identity = 204/270 (75.56%), Postives = 216/270 (80.00%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           MARTCCHVSLAFI+KCFNFLQAFVG+SIIVYSAWMLDRWNH +PVSPPPSP+PALAPSPA
Sbjct: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
           S   FYL+SESV++ADRI   NL  DL P   T+LE+DLNAFKLPAPWFIYSFMGLGILL
Sbjct: 61  S---FYLSSESVAVADRIMPINLAADLTPGFDTELEIDLNAFKLPAPWFIYSFMGLGILL 120

Query: 121 CSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGELDG 180
           C   LVGCIAAEAISGCCLCF                           DLP DPTGEL+ 
Sbjct: 121 CCIALVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIGIDRRWEKDLPLDPTGELEE 180

Query: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRETL 240
           LRQFIEDN+DLCKWIGI VISTQALSLLLAIILRSMVSTRKTEYDT EEIG +DR RE L
Sbjct: 181 LRQFIEDNIDLCKWIGITVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPL 240

Query: 241 LNPPANQASGAKFALWGARMREKYGLKNSD 243
           LNPP NQASGA F LWGARMREKYGL NSD
Sbjct: 241 LNPPGNQASGAHFDLWGARMREKYGLNNSD 267

[Close]

BLAST of Cp4.1LG05g00880 vs. ExPASy TrEMBL
Match: A0A0A0L8P5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G622440 PE=4 SV=1)

HSP 1 Score: 391 bits (1004), Expect = 2.78e-135
Identity = 205/272 (75.37%), Postives = 219/272 (80.51%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           MARTCCHVSLAFILKCFNFLQAFVG+SIIVYSAWMLDRWNH VPVSPPP PVPALAPSPA
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPP-PVPALAPSPA 60

Query: 61  -SSASFYLNSESVSLADRITAANLGVDLIPELGTD-LELDLNAFKLPAPWFIYSFMGLGI 120
            SS SFYLNSESV++ADRITA +L  D IPE   + L+L+LNAFKLPAPWFIYSFMG G+
Sbjct: 61  ASSVSFYLNSESVTVADRITAMDLAADFIPEFDREELKLELNAFKLPAPWFIYSFMGFGV 120

Query: 121 LLCSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGEL 180
           LLC  TLVGCIAAEAISGCCLCF                           DLP DPTGEL
Sbjct: 121 LLCCITLVGCIAAEAISGCCLCFYNMLIMLFIIVEVGLVAFIAIDRSWEKDLPLDPTGEL 180

Query: 181 DGLRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEIGDQDRIRE 240
           D LR FIEDN++L KWIGI+VISTQALSLLLAIILRSMVSTRKTEYDT EE+G +DR RE
Sbjct: 181 DELRHFIEDNINLSKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGVRDRTRE 240

Query: 241 TLLNPPANQASGAKFALWGARMREKYGLKNSD 243
            LLNPPANQA+GA F LWGARMREKYGL NSD
Sbjct: 241 PLLNPPANQAAGAHFDLWGARMREKYGLNNSD 271

[Close]

BLAST of Cp4.1LG05g00880 vs. TAIR 10
Match: AT4G28770.1 (Tetraspanin family protein )

HSP 1 Score: 242.7 bits (618), Expect = 3.1e-64
Identity = 139/277 (50.18%), Postives = 176/277 (63.54%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           M   CCHVS A ILK  NFLQAF+GISII+YS WMLD++NH VPV PPPS  PA A SP 
Sbjct: 1   MRHNCCHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPA-ASSPD 60

Query: 61  SSASF-----YLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMG 120
           SS SF      +NS S SL + I   + G+ ++   G D   +L +  LPAPWFIY FM 
Sbjct: 61  SSYSFSNSIIEINSVSDSLKNPIDFVS-GI-VLGSGGGDSGFNLRSLDLPAPWFIYCFMA 120

Query: 121 LGILLCSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPT 180
           +GIL+C  T++G IAAEAI+GCCLCF                           DLP+DPT
Sbjct: 121 IGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPT 180

Query: 181 GELDGLRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEI-GDQD 240
           GEL+ LR FIE+N+D+CKW+GI+V++ Q LSLLLA++LR+MVS R++E D  ++      
Sbjct: 181 GELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMS 240

Query: 241 RIRETLLNPPANQASGAKFAL--WGARMREKYGLKNS 243
           R R+ LL P ANQ S     +  W +R+REKYGL NS
Sbjct: 241 RARDNLLGPQANQTSSGSSNIDNWRSRIREKYGLINS 274

[Close]

BLAST of Cp4.1LG05g00880 vs. TAIR 10
Match: AT4G28770.2 (Tetraspanin family protein )

HSP 1 Score: 242.7 bits (618), Expect = 3.1e-64
Identity = 139/277 (50.18%), Postives = 176/277 (63.54%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           M   CCHVS A ILK  NFLQAF+GISII+YS WMLD++NH VPV PPPS  PA A SP 
Sbjct: 45  MRHNCCHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPA-ASSPD 104

Query: 61  SSASF-----YLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMG 120
           SS SF      +NS S SL + I   + G+ ++   G D   +L +  LPAPWFIY FM 
Sbjct: 105 SSYSFSNSIIEINSVSDSLKNPIDFVS-GI-VLGSGGGDSGFNLRSLDLPAPWFIYCFMA 164

Query: 121 LGILLCSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPT 180
           +GIL+C  T++G IAAEAI+GCCLCF                           DLP+DPT
Sbjct: 165 IGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPT 224

Query: 181 GELDGLRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEEI-GDQD 240
           GEL+ LR FIE+N+D+CKW+GI+V++ Q LSLLLA++LR+MVS R++E D  ++      
Sbjct: 225 GELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMS 284

Query: 241 RIRETLLNPPANQASGAKFAL--WGARMREKYGLKNS 243
           R R+ LL P ANQ S     +  W +R+REKYGL NS
Sbjct: 285 RARDNLLGPQANQTSSGSSNIDNWRSRIREKYGLINS 318

[Close]

BLAST of Cp4.1LG05g00880 vs. TAIR 10
Match: AT2G20230.1 (Tetraspanin family protein )

HSP 1 Score: 219.9 bits (559), Expect = 2.2e-57
Identity = 125/272 (45.96%), Postives = 159/272 (58.46%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           M R CCHVS A  LK  NF+QAF+G+SII+YS WML  ++  +PV PPPS   +     A
Sbjct: 1   MRRNCCHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIA 60

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
           +S S  L +    +A  I  +N         G D   +L +  LPAPWFIYSFM +GIL+
Sbjct: 61  TSVSEPLKNPIDFVASIILGSN---------GGDHGFNLRSLDLPAPWFIYSFMAVGILV 120

Query: 121 CSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGELDG 180
           C  T +G IAAEAI+GCCLCF                           DLP+DPTGEL  
Sbjct: 121 CIVTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSS 180

Query: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNE-EIGDQDRIRET 240
           LR FIE+N+D+CKW+GI V++ Q LSLLLA++LR+MVST K E D  E +   + R  + 
Sbjct: 181 LRAFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDENPRSRTWDP 240

Query: 241 LLNPPANQ--ASGAKFALWGARMREKYGLKNS 243
           LL P  NQ  A  +K   W +R+REKYGL  S
Sbjct: 241 LLGPQGNQAPAGSSKIENWSSRIREKYGLNQS 263

[Close]

BLAST of Cp4.1LG05g00880 vs. TAIR 10
Match: AT2G20740.1 (Tetraspanin family protein )

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-19
Identity = 70/265 (26.42%), Postives = 109/265 (41.13%), Query Frame = 0


Query: 1   MARTCCHVSLAFILKCFNFLQAFVGISIIVYSAWMLDRWNHQVPVSPPPSPVPALAPSPA 60
           + R+C    L  +LK  N L   VGI++I+Y+ W++ +W  Q+   P             
Sbjct: 4   IVRSC----LQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLP------------- 63

Query: 61  SSASFYLNSESVSLADRITAANLGVDLIPELGTDLELDLNAFKLPAPWFIYSFMGLGILL 120
                + +S+                                  P PWFIYSF+GLG +L
Sbjct: 64  -----FADSDH---------------------------------PVPWFIYSFLGLGAIL 123

Query: 121 CSTTLVGCIAAEAISGCCLCF---------------------------DLPFDPTGELDG 180
           C  T  G IAAE ++GCCL                             D P DP+G    
Sbjct: 124 CVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQ 183

Query: 181 LRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTNEE--IGDQDRIRE 234
             +FIE N  +CKWIG+ ++  Q LS+L+A++L+++       YD+++E  +     +++
Sbjct: 184 FSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQD 213

[Close]

BLAST of Cp4.1LG05g00880 vs. TAIR 10
Match: AT2G20740.2 (Tetraspanin family protein )

HSP 1 Score: 92.8 bits (229), Expect = 4.0e-19
Identity = 53/161 (32.92%), Postives = 78/161 (48.45%), Query Frame = 0


Query: 105 PAPWFIYSFMGLGILLCSTTLVGCIAAEAISGCCLCF----------------------- 164
           P PWFIYSF+GLG +LC  T  G IAAE ++GCCL                         
Sbjct: 12  PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNR 71

Query: 165 ----DLPFDPTGELDGLRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEY 224
               D P DP+G      +FIE N  +CKWIG+ ++  Q LS+L+A++L+++       Y
Sbjct: 72  DWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHY 131

Query: 225 DTNEE--IGDQDRIRETLLNPP---ANQASGAKFALWGARM 234
           D+++E  +     +++    PP        GAK   W  R+
Sbjct: 132 DSDDEYNVSTVALLQDARQPPPYVVGEPMYGAKPGAWTVRL 172

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g00880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVU4	4.4e-63	50.18	Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1	[more]
Q93XY5	3.1e-56	45.96	Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1	[more]
Q940P5	1.5e-18	26.42	Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1	[more]
Q9C5W7	5.9e-15	25.90	Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A P...	[more]

BLAST of Cp4.1LG05g00880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023533047.1	2.03e-167	90.00	tetraspanin-20-like [Cucurbita pepo subsp. pepo]	[more]
XP_022931236.1	6.52e-164	88.15	tetraspanin-20-like [Cucurbita moschata] >XP_022931237.1 tetraspanin-20-like [Cu...	[more]
KAG6606336.1	6.24e-162	87.41	Tetraspanin-18, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022995305.1	2.43e-159	86.67	tetraspanin-20 [Cucurbita maxima]	[more]
KAG7036276.1	7.07e-159	92.03	Tetraspanin-18, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG05g00880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ET48	3.15e-164	88.15	tetraspanin-20-like OS=Cucurbita moschata OX=3662 GN=LOC111437473 PE=4 SV=1	[more]
A0A6J1K3Q7	1.18e-159	86.67	tetraspanin-20 OS=Cucurbita maxima OX=3661 GN=LOC111490887 PE=4 SV=1	[more]
A0A6J1HHZ4	1.08e-138	75.93	tetraspanin-20-like OS=Cucurbita moschata OX=3662 GN=LOC111463811 PE=4 SV=1	[more]
A0A6J1HWE7	3.09e-138	75.56	tetraspanin-20-like OS=Cucurbita maxima OX=3661 GN=LOC111466873 PE=4 SV=1	[more]
A0A0A0L8P5	2.78e-135	75.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G622440 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g00880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28770.1	3.1e-64	50.18	Tetraspanin family protein	[more]
AT4G28770.2	3.1e-64	50.18	Tetraspanin family protein	[more]
AT2G20230.1	2.2e-57	45.96	Tetraspanin family protein	[more]
AT2G20740.1	1.1e-19	26.42	Tetraspanin family protein	[more]
AT2G20740.2	4.0e-19	32.92	Tetraspanin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19282:SF453	TETRASPANIN-20	coord: 142..224 coord: 3..141
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 142..224 coord: 3..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g00880.1	Cp4.1LG05g00880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane