Cp4.1LG05g00640 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG05g00640
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
LocationCp4.1LG05: 665825 .. 671813 (+)
RNA-Seq ExpressionCp4.1LG05g00640
SyntenyCp4.1LG05g00640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGACGTTGAAGAAATCAAACGAGAGTACAAAACGAGGGAGTCCAATCCAACGTCCTGTTGAAAACCTAATTTCTTTGATCAACTCAACTCTGCCCTACTCCCCCGTCGAACTCCTCGCCGTCGCTTCGCCGGATTCGAGCCAAGGCGACGGCGCGGGAGGTTTGATTATCAGAATTCAGAGAAAAGAAGCTGAGAGGTACGGACTTAGATTTACGATTCACAAAGAAGACGGAGAAATTGAGGAGAATTTTGCGAACGGGTGATAGAAAGAGGTTGCTACGAAGTGGAATTAAAGTGGAGAGTTAGGGCGACTCGAAGTCCTCGCCAAATTAAGGTGAGCACCTGACATTAGGTTTTCTTGTATTACTGTTTGCATTTAGGGAAGGAGATCGGAGGAAGTTAAGGAAAGTTGCTCCTCGTTTTGACCGTTGTTTCCTTTAATGTTTCCTAATGTAGGCTGTATAATCATTGAAGTTTTCGCGGAATCTATCCATTACGCACTTTTTCTGGAGTAATTTAGTGGAAGATTTCTATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGAATTGAAGATATCAGTTGGCTTTGCTCGTTATCTGAATCAGAGCTTGTAAGTTCCATCTGGAATTTTTTGTATTAGACACCCACTCATTTTATGGTGTAAGCTTTTCTTACAAATATCGAGCATTCTTCTTGTGGTTGTTGAATAGCCACGCGAATTTTTATATTTTTTCCTATGAATTTTATTTGAAAGGATTAATGTCTTTTGCTTGATTTTGATAAAAATGGACGACGACCTGTATTAGGATTTCCATGTACTGTCACATTCAAAAGTACATTCAGTATGAGCTGTGTGGTTCGGATCATATGCTTATTGTTTCTATATATGATGTATGTGGCAGGACTTTCTGATTAGCATTAAAATGCTAGTTCTCCAGCGTGCAAAAGTAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTATAGGTATTTCTACTTTCTGTGCTGTATTTCTTGTATTTGTGTTTCCTCTAATTATCTTATCATTGCTAGAATGCTAGTGTAAACTCTCACCTCTCTAGCATCCCTAGTGTACGGACACCGTGTTGCTTTCTATGTGCTATCTACTACATTAGTTGCTGAACAATTTTGCATTTACGGCGCTATCCATGCAGGGTTTATTTTGATGGAGCATCTTAAAGGACAACTTAGTGTGTCAGGTGTCCCAGATCAGTCTCAATTTTCTGCCTTAAATGGGTCCAACTTATTAGACAGCAGTCTTGAGAAAATTTTGTCAATTGATGATATAATGGCAAGCATCTGTTCTGAAAGAAGGAAGAAACCTGGAAAAAGGTTGGTACTAACTACAAGTTTCTGCTATTTATTTGCAAGCATAGCAAAACATCATATTATTATAATTATTATTAATAGTTCAATAACATTTGAGGTGGAGGGATTAGTACCTTTGACATCTTTGACAAAAAATGGGGGTTCATGTCAAATATCTCATATTATTTATTGCATTGTTAGTTTGGAACTTTTGCATAGATATATATTTTTTTAAAAATATATATATATTTTCAGCCATCATGGTTTCCATATAAACTTGGTACCGATGCATTAGATATCAATGAGATCTTGCCTGTTTCTAATATTTTTTTCCCTTGAATGCCAGAATGGGCGTTCATATCATTAATTCATTCTCTAATTTGAGCTGGTTTCTTTCCATACTAAGTTTCTAAGGTATAGTACTGGATAGGCGTTGTTGCCAAAATCCTGACAAGGTAGTGCACCTAACCTTCACATGACAATGATAAAATTTGTTCAAGGGGGAAAAATGAAGCATGGAAGACAAGAAAAGCTTGCATATTGGTGTGGTGCTTGCCACATGTCTAATGGTTAAGTTAGCTAGGAGGAATTTAGTTTAGCAAGAACTTTAGGAATTGGAAGAACTTTGGACTTAGTTGGCTTTCCTTCTCCCAATAGAAGAAAGTGATTATATCCCCGTTTTGTTGATTCTTTCTGGGTTAGGGTAAAAGAGGATTGGAATTATTGGGCGGGACTAGGATCACACAAATCAGGGAATGTCGGACTCGGGTGCCGATAAGGAAACTTGGCTTCAGCCCAAGTTTCTTTTCTTTCTTTTGATTAGTGGCTGTGACCCGACTTTCTTCATGTTTAGCTTGTTTTTCACTGTGTTGGATTTTTTAGTCTCATTTGGTCCTTGACTTTCACGGTCTTTGTGCTTGTCCGTATGGTCCAATTTTACCTGGAACAACAGACCTTTTTTTTTTTTTTCCTTTCTGCCACTTCCCTGTCATGATTGGATTCAGGCCATTTTATTTTCTTAATATTTCTTGATTTATTATTTCAAATGCTATCACTTTAATTCTTTGCTCTCGTATTGGTTTTTTGTTTTGATAATTAGAAGAGAAAAAAAGGAAAACAAAAACAACTACATTTACCTTGTGGTTTTCATAAAGCCCTTATTCATATAAACTTTCATGGTTACGCTGATGCATTGGATACGTTGTAAATCAATAAGATGATGCCTGTTCGAAATGTTTTTGCTTTGAACTCCATGTTGCTATACTTTCACTCTCTAATTAGAGCTGGTTTCTTTTCTTTCCGTGTTTCTGAAACACAGTAGTAGATAGGAGTTTTTGACGGAATAATTTACTTTTTCCTGGCCTACATCTTTTTATTTTTTGCTACCTTCCTTCATTGTATGAATTTGGTTCATTCCATTTTATTTTCTATAATATTTATAGATTTACTAATTGAAATGCCATCACTTAAATTCTGTAATCTAAATAACTTCTGTGTTGTGCTTTTAAGTTAGTGCTGTTTTCCCCAATTTGTAAAGCCAACTTGAATCTCATATCTCTCATCTTTTCCCCCCTCCCTCTCTCCCTTTTCTAGGTCGCGGCCGAAGGCTGATTCTAGACCAAAGAAGAAGTTGTGAATTAGAAAATAGCAGAAGTAGACACAGATTCATGGAGGTTGTCTTGGCCTAACTGATGAACAATGCAGCTCCCACATTGCGAGACTTGGCGGTAATCCTGCAGCCATGATCACGCAAACAATTTTGTTAGCCTTTATTGTAATTGTTGTTGCGTCAAATCAGTAATCACGTTCCACTATTGTTGTATTGTTTCTATTTTGTTATAGTGTATGAAGCAAAGGAACCATTACAAATAAGTCGATGTTTTATTAATTTTTCAAGCTCAATCTGCTTTCATTTAATTGAAACCTCTCATGAGTTTTGATATTCGTATCGATGACATCATAGCTTTACGAAAAATTAACGATCCTTTTACATTGGAGCGATGGTGGTGGGAATCGGAGTATAATTCAATTCTTATTTCTTGTTAGAAGGTTGAAAACTCTTCTCATATTGATACATTCCCTTTTTTCTAGAGCTCTAATATTCTGGAGGATCGCTCGACATCTTTTTGCAGGTGACTATAACACGGAAGGAAATGAGTTCGACAATCTCATATGAGGTACTTCGACAACTTAGATAATGATTAAAAAATAGTTTCAACCCCAATAGAACATTAGAATGATATTAGCATTGGAACTAGTCTATATGTAATAGTTGAAACTCTATATCTGAATGCCTTTGAAAATGTTCTCTAAAAATATGCACAAAGCCAAAAGATTTGGGGCCTGAAATAGCCCTCAAATATGACGATAAAGTACTTCGCTACAGATCCTCTCCTGCCCCAAGGTTTCATTATTAGAAAAAAAACACGTTAAGCTGTTATGATCTAAGATCAAATGCTTTCATCTGATTGCAGATGGTATTCCATTAGTAGGAAGAACAGTAATGTGTCTCAAAGGGTGAGAAATTTCTTCGCCCCCGGCGTGCTTGACGAACTCGGCTGGTGAAAAGGATTCTCCATGGCAGACGCACAAAATACTGACCTCCAAGTTGGAGTATCTGTACAAGAACCCAGTGATGGTTTTGCCGTTGGGACCAACTCCGGTCGTCGAAACGCAGGGCATTTGCTGAAGGCTTGGCACATTTCGGCTAAGAATTTGAGGCTTTGGAAGTTCCTCATTCTCCATCTTCATGTTCTTTATTGACATGGAAGGAGACCTCTGGGAATTGAAAACAGATTTGTTGCTCGATCCAGTGATTGGCTCTTTCTTGTGGACATGGGATTCACCAGATTTCTCTTCACGTTGTGTCCTGTTCTCACTGCAAGGCTTTGGTTTATCATGATTCATAGAATCATTCGTATTTGGTTTCGGGTTCGGACATCGCATTTGGTGTTGATCTGATGAGGAATTACATGAATTGTTTCTGGTATAGCTGCTACCACCTCCTGATAGAAAATGAACAACAACTTAAATCTCGATTCTGAGAGAAAAAATAAAGAACCATACTCATGAAAAGGAAATCAATGATCGAGGATTGACACATTCTGAGAAACACAAGATTTGCAGGCACCTTCATGAGATGAAGAACTCTGGTAATTTTCAGAAATAACAGAGGAACTGCAAACAGGGGATGATCCAGAAGACCCAGTTTTCCTGTTCTTCCTTCCATTCGAAAATCCGTCTGAACTTCGTCGATCCGTCTCAAACGGCCTGAAGCTCTGGCAAGCTACCGGCTGATGGACGGTTCTCTCACCGCCGTGGCCAGCCGCCTCCCAGTACGGCACCACACAGGGGAAAACGAAGCCATTCATAAACGGCACGTACTGCAACGACGAATAAGGATATGGCATTAGCTCTGCAGATCCATTTCGACATTCATATCCAACGCCTTGAAGCTTCTTCTCCCTCTTCAATGGCGGATTCCGTTCGTCTTCTTCGTCTCGTTTCCTCTTGGTCTCTCGTCGCCGGATCTGGCCTCTATTCTTGGCATCAGTAACTCCGCTATCCTCCTCGTCTCCATCGCTAGTCCACAACGTGAAGGAAGAACCAGACGCCGTCGATTTCTCCGGTAAGGTTCTAAAAACTCCGCCGATTGACAACGCTAAATCGACGTCTACGTCGTTGTTGTTTTCATCTGGTAAGACCACAGATTTCATCTTCTCACAAAAACGAAGAACAAAGATGAAGAGAATCGCAGCAGAAAAAGAAGATTACAAATGTGGGGATGCGGGATTGTTGGGTTATATGGATTGGACGGAGTGATTCTCGGGGGATGGAGAAGGGGTGACGTGTCGGCCATGGAGGAGGTAAGGACGGCGGTGGGGTTGGAGGAAGGAAGAAGAAAGCAAGACGAAAGGATATAATCAGAGAGATATTTTTAGAGCATCGCCATTAAAATTTGGTAATCTTAATTTTAATTATTTTTTTATTATAATATATTTTATTATTTTAGCTTATCTTAAAATTGAGATTATTTGATCCTAATCTAAGGTTTTCGAATAATAAATTATTAGAGAGAGGCATGGGGACGCCACGTGTCGGGTTTTAGCGGGAAAAGGCATGACTGTCTGACAGGCTGGCGAAGAAGAACACGTGGCGGGGTGATTTTCCCGTCCCCACGAATCTCTCTTTCCACGTTAAAATCTCATGCCGCGAGATCAGCGCAACCATGTAGACTATGAACACATGTATATCGTTTTTACGGGTCCCACTATGATGACACGTGATGATATGACAGCTAAGGACGCCAACTTTTTTGACTCGGATTATTGGTTATGACACGCTGTCAGACACGTGGCTGGTTTTGTTTGGATAAGACGGGGTAAGAGTACGGTGACGAATAATTCTGTGGGGTCCTTTGTTTGACACGGCGCGTGGATTATCTTGTTTTGAGGTGCCACGTGACTTCATAAGAGACGTGGAGAAAGGATGTGGATTCGACGGTGCTGGAGTGGCCACGTCGATTTCCGTTTTTTCTTTTCTTCTTCGTATTTCGAGTTATTTCTTTTCCTAAATTAAAGAGGACCAAAAAAAAAATAATATAGAGTTTTGTAAATTAAATAATTGTATTTAGTGTTG

mRNA sequence

TAGACGTTGAAGAAATCAAACGAGAGTACAAAACGAGGGAGTCCAATCCAACGTCCTGTTGAAAACCTAATTTCTTTGATCAACTCAACTCTGCCCTACTCCCCCGTCGAACTCCTCGCCGTCGCTTCGCCGGATTCGAGCCAAGGCGACGGCGCGGGAGGTTTGATTATCAGAATTCAGAGAAAAGAAGCTGAGAGGTACGGACTTAGATTTACGATTCACAAAGAAGACGGAGAAATTGAGGAGAATTTTGCGAACGGGTGATAGAAAGAGGTTGCTACGAAGTGGAATTAAAGTGGAGAGTTAGGGCGACTCGAAGTCCTCGCCAAATTAAGGCTGTATAATCATTGAAGTTTTCGCGGAATCTATCCATTACGCACTTTTTCTGGAGTAATTTAGTGGAAGATTTCTATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGAATTGAAGATATCAGTTGGCTTTGCTCGTTATCTGAATCAGAGCTTGACTTTCTGATTAGCATTAAAATGCTAGTTCTCCAGCGTGCAAAAGTAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTATAGGGTTTATTTTGATGGAGCATCTTAAAGGACAACTTAGTGTGTCAGGTGTCCCAGATCAGTCTCAATTTTCTGCCTTAAATGGGTCCAACTTATTAGACAGCAGTCTTGAGAAAATTTTGTCAATTGATGATATAATGGCAAGCATCTGTTCTGAAAGAAGGAAGAAACCTGGAAAAAGGTCGCGGCCGAAGGCTGATTCTAGACCAAAGAAGAAGTTGTGAATTAGAAAATAGCAGAAGTAGACACAGATTCATGGAGGTTGTCTTGGCCTAACTGATGAACAATGCAGCTCCCACATTGCGAGACTTGGCGGTGACTATAACACGGAAGGAAATGAGTTCGACAATCTCATATGAGGTACTTCGACAACTTAGATAATGATTAAAAAATAGTTTCAACCCCAATAGAACATTAGAATGATATTAGCATTGGAACTAGTCTATATGTAATAGTTGAAACTCTATATCTGAATGCCTTTGAAAATGTTCTCTAAAAATATGCACAAAGCCAAAAGATTTGGGGCCTGAAATAGCCCTCAAATATGACGATAAAGTACTTCGCTACAGATCCTCTCCTGCCCCAAGGTTTCATTATTAGAAAAAAAACACGTTAAGCTGTTATGATCTAAGATCAAATGCTTTCATCTGATTGCAGATGGTATTCCATTAGTAGGAAGAACAGTAATGTGTCTCAAAGGGTGAGAAATTTCTTCGCCCCCGGCGTGCTTGACGAACTCGGCTGGTGAAAAGGATTCTCCATGGCAGACGCACAAAATACTGACCTCCAAGTTGGAGTATCTGTACAAGAACCCAGTGATGGTTTTGCCGTTGGGACCAACTCCGGTCGTCGAAACGCAGGGCATTTGCTGAAGGCTTGGCACATTTCGGCTAAGAATTTGAGGCTTTGGAAGTTCCTCATTCTCCATCTTCATGTTCTTTATTGACATGGAAGGAGACCTCTGGGAATTGAAAACAGATTTGTTGCTCGATCCAGTGATTGGCTCTTTCTTGTGGACATGGGATTCACCAGATTTCTCTTCACGTTGTGTCCTGTTCTCACTGCAAGGCTTTGGTTTATCATGATTCATAGAATCATTCGTATTTGGTTTCGGGTTCGGACATCGCATTTGGTGTTGATCTGATGAGGAATTACATGAATTGTTTCTGGTATAGCTGCTACCACCTCCTGATAGAAAATGAACAACAACTTAAATCTCGATTCTGAGAGAAAAAATAAAGAACCATACTCATGAAAAGGAAATCAATGATCGAGGATTGACACATTCTGAGAAACACAAGATTTGCAGGCACCTTCATGAGATGAAGAACTCTGGTAATTTTCAGAAATAACAGAGGAACTGCAAACAGGGGATGATCCAGAAGACCCAGTTTTCCTGTTCTTCCTTCCATTCGAAAATCCGTCTGAACTTCGTCGATCCGTCTCAAACGGCCTGAAGCTCTGGCAAGCTACCGGCTGATGGACGGTTCTCTCACCGCCGTGGCCAGCCGCCTCCCAGTACGGCACCACACAGGGGAAAACGAAGCCATTCATAAACGGCACGTACTGCAACGACGAATAAGGATATGGCATTAGCTCTGCAGATCCATTTCGACATTCATATCCAACGCCTTGAAGCTTCTTCTCCCTCTTCAATGGCGGATTCCGTTCGTCTTCTTCGTCTCGTTTCCTCTTGGTCTCTCGTCGCCGGATCTGGCCTCTATTCTTGGCATCAGTAACTCCGCTATCCTCCTCGTCTCCATCGCTAGTCCACAACGTGAAGGAAGAACCAGACGCCGTCGATTTCTCCGGTAAGGTTCTAAAAACTCCGCCGATTGACAACGCTAAATCGACGTCTACGTCGTTGTTGTTTTCATCTGGTAAGACCACAGATTTCATCTTCTCACAAAAACGAAGAACAAAGATGAAGAGAATCGCAGCAGAAAAAGAAGATTACAAATGTGGGGATGCGGGATTGTTGGGTTATATGGATTGGACGGAGTGATTCTCGGGGGATGGAGAAGGGGTGACGTGTCGGCCATGGAGGAGGTAAGGACGGCGGTGGGGTTGGAGGAAGGAAGAAGAAAGCAAGACGAAAGGATATAATCAGAGAGATATTTTTAGAGCATCGCCATTAAAATTTGAGAGAGGCATGGGGACGCCACGTGTCGGGTTTTAGCGGGAAAAGGCATGACTGTCTGACAGGCTGGCGAAGAAGAACACGTGGCGGGGTGATTTTCCCGTCCCCACGAATCTCTCTTTCCACGTTAAAATCTCATGCCGCGAGATCAGCGCAACCATGTAGACTATGAACACATGTATATCGTTTTTACGGGTCCCACTATGATGACACGTGATGATATGACAGCTAAGGACGCCAACTTTTTTGACTCGGATTATTGGTTATGACACGCTGTCAGACACGTGGCTGGTTTTGTTTGGATAAGACGGGGTAAGAGTACGGTGACGAATAATTCTGTGGGGTCCTTTGTTTGACACGGCGCGTGGATTATCTTGTTTTGAGGTGCCACGTGACTTCATAAGAGACGTGGAGAAAGGATGTGGATTCGACGGTGCTGGAGTGGCCACGTCGATTTCCGTTTTTTCTTTTCTTCTTCGTATTTCGAGTTATTTCTTTTCCTAAATTAAAGAGGACCAAAAAAAAAATAATATAGAGTTTTGTAAATTAAATAATTGTATTTAGTGTTG

Coding sequence (CDS)

ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGAATTGAAGATATCAGTTGGCTTTGCTCGTTATCTGAATCAGAGCTTGACTTTCTGATTAGCATTAAAATGCTAGTTCTCCAGCGTGCAAAAGTAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTATAGGGTTTATTTTGATGGAGCATCTTAAAGGACAACTTAGTGTGTCAGGTGTCCCAGATCAGTCTCAATTTTCTGCCTTAAATGGGTCCAACTTATTAGACAGCAGTCTTGAGAAAATTTTGTCAATTGATGATATAATGGCAAGCATCTGTTCTGAAAGAAGGAAGAAACCTGGAAAAAGGTCGCGGCCGAAGGCTGATTCTAGACCAAAGAAGAAGTTGTGA

Protein sequence

MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGKRSRPKADSRPKKKL
Homology
[Close]
BLAST of Cp4.1LG05g00640 vs. NCBI nr
Match: XP_023533769.1 (uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250 bits (639), Expect = 1.84e-83
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120
           IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK
Sbjct: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120

Query: 121 RSRPKADSRPKKKL 134
           RSRPKADSRPKKKL
Sbjct: 121 RSRPKADSRPKKKL 134

[Close]
BLAST of Cp4.1LG05g00640 vs. NCBI nr
Match: KAG6606306.1 (hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 249 bits (636), Expect = 5.28e-83
Identity = 132/134 (98.51%), Postives = 134/134 (100.00%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120
           +GFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEK+LSIDDIMASICSERRKKPGK
Sbjct: 61  LGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERRKKPGK 120

Query: 121 RSRPKADSRPKKKL 134
           RSRPKADSRPKKKL
Sbjct: 121 RSRPKADSRPKKKL 134

[Close]
BLAST of Cp4.1LG05g00640 vs. NCBI nr
Match: XP_022931147.1 (uncharacterized protein LOC111437414 [Cucurbita moschata] >XP_022931148.1 uncharacterized protein LOC111437414 [Cucurbita moschata])

HSP 1 Score: 248 bits (633), Expect = 1.51e-82
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120
           IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEK+LSIDDIMASIC ERRKKPGK
Sbjct: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICCERRKKPGK 120

Query: 121 RSRPKADSRPKKKL 134
           RSRPKADSRPKKKL
Sbjct: 121 RSRPKADSRPKKKL 134

[Close]
BLAST of Cp4.1LG05g00640 vs. NCBI nr
Match: XP_022995750.1 (uncharacterized protein LOC111491189 [Cucurbita maxima] >XP_022995751.1 uncharacterized protein LOC111491189 [Cucurbita maxima])

HSP 1 Score: 246 bits (628), Expect = 8.76e-82
Identity = 131/134 (97.76%), Postives = 133/134 (99.25%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120
           +GFILMEHLKGQLSVS VPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK
Sbjct: 61  LGFILMEHLKGQLSVSSVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120

Query: 121 RSRPKADSRPKKKL 134
           RSRPKADSRP+KKL
Sbjct: 121 RSRPKADSRPRKKL 134

[Close]
BLAST of Cp4.1LG05g00640 vs. NCBI nr
Match: KAG7036244.1 (hypothetical protein SDJN02_03046 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243 bits (620), Expect = 1.72e-80
Identity = 132/139 (94.96%), Postives = 134/139 (96.40%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IG-----FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERR 120
           +G     FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEK+LSIDDIMASICSERR
Sbjct: 61  LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120

Query: 121 KKPGKRSRPKADSRPKKKL 134
           KKPGKRSRPKADSRPKKKL
Sbjct: 121 KKPGKRSRPKADSRPKKKL 139

[Close]
BLAST of Cp4.1LG05g00640 vs. ExPASy TrEMBL
Match: A0A6J1ESQ9 (uncharacterized protein LOC111437414 OS=Cucurbita moschata OX=3662 GN=LOC111437414 PE=4 SV=1)

HSP 1 Score: 248 bits (633), Expect = 7.32e-83
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120
           IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEK+LSIDDIMASIC ERRKKPGK
Sbjct: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICCERRKKPGK 120

Query: 121 RSRPKADSRPKKKL 134
           RSRPKADSRPKKKL
Sbjct: 121 RSRPKADSRPKKKL 134

[Close]
BLAST of Cp4.1LG05g00640 vs. ExPASy TrEMBL
Match: A0A6J1K2S6 (uncharacterized protein LOC111491189 OS=Cucurbita maxima OX=3661 GN=LOC111491189 PE=4 SV=1)

HSP 1 Score: 246 bits (628), Expect = 4.24e-82
Identity = 131/134 (97.76%), Postives = 133/134 (99.25%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120
           +GFILMEHLKGQLSVS VPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK
Sbjct: 61  LGFILMEHLKGQLSVSSVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120

Query: 121 RSRPKADSRPKKKL 134
           RSRPKADSRP+KKL
Sbjct: 121 RSRPKADSRPRKKL 134

[Close]
BLAST of Cp4.1LG05g00640 vs. ExPASy TrEMBL
Match: A0A6J1DR49 (uncharacterized protein LOC111023068 OS=Momordica charantia OX=3673 GN=LOC111023068 PE=4 SV=1)

HSP 1 Score: 212 bits (539), Expect = 1.62e-68
Identity = 113/131 (86.26%), Postives = 119/131 (90.84%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60

Query: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120
           IGF LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEKILSID+IMAS+CS+RRKKPGK
Sbjct: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120

Query: 121 RSRPKADSRPK 131
           R R KADSR K
Sbjct: 121 RPRQKADSRQK 131

[Close]
BLAST of Cp4.1LG05g00640 vs. ExPASy TrEMBL
Match: A0A1S3BQH9 (uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=4 SV=1)

HSP 1 Score: 191 bits (485), Expect = 1.99e-60
Identity = 100/123 (81.30%), Postives = 110/123 (89.43%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEA EILK+NR+EDISWLCSLSESELD LISIKMLVLQRAK IGHE+LAEKFDLKTLRA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120
           IGF+LMEHLKG+L  S V D SQ + LN  NLLDS++EKILSID+IMASICS+RRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RSR 123
           R R
Sbjct: 121 RPR 123

[Close]
BLAST of Cp4.1LG05g00640 vs. ExPASy TrEMBL
Match: A0A5A7UQA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001160 PE=4 SV=1)

HSP 1 Score: 190 bits (483), Expect = 3.68e-59
Identity = 99/123 (80.49%), Postives = 110/123 (89.43%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEA EILK+NR+EDISWLCSLSESELD LISIKMLVLQRAK IGHE+LAEKFDLKTLRA
Sbjct: 60  MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 119

Query: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120
           IGF+LMEHLKG+L  S V D SQ + LN  NLLDS++EKILSID+IMASICS+RRKKPGK
Sbjct: 120 IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 179

Query: 121 RSR 123
           R +
Sbjct: 180 RGK 182

[Close]
BLAST of Cp4.1LG05g00640 vs. TAIR 10
Match: AT1G80245.1 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 59/126 (46.83%), Postives = 85/126 (67.46%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEE  +ILK+NR +D++W CSLSESELD LIS+K L +QRAK+ GH++LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFILMEHLKG--QLSVSGVPD-QSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKK 120
           +G +LMEH +   Q   S  P    Q   L+  NLL + ++  + I++I+  IC  + KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

Query: 121 PGKRSR 124
             ++ R
Sbjct: 121 KARKRR 126

[Close]
BLAST of Cp4.1LG05g00640 vs. TAIR 10
Match: AT1G80245.2 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 59/126 (46.83%), Postives = 85/126 (67.46%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEE  +ILK+NR +D++W CSLSESELD LIS+K L +QRAK+ GH++LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFILMEHLKG--QLSVSGVPD-QSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKK 120
           +G +LMEH +   Q   S  P    Q   L+  NLL + ++  + I++I+  IC  + KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

Query: 121 PGKRSR 124
             ++ R
Sbjct: 121 KARKRR 126

[Close]
BLAST of Cp4.1LG05g00640 vs. TAIR 10
Match: AT1G80245.3 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 59/126 (46.83%), Postives = 85/126 (67.46%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEE  +ILK+NR +D++W CSLSESELD LIS+K L +QRAK+ GH++LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFILMEHLKG--QLSVSGVPD-QSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKK 120
           +G +LMEH +   Q   S  P    Q   L+  NLL + ++  + I++I+  IC  + KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

Query: 121 PGKRSR 124
             ++ R
Sbjct: 121 KARKRR 126

[Close]
BLAST of Cp4.1LG05g00640 vs. TAIR 10
Match: AT4G00695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.6 bits (270), Expect = 3.9e-24
Identity = 63/128 (49.22%), Postives = 92/128 (71.88%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDL-AEKFDLKTLR 60
           MEE  +ILK+NR +D++W CSLSESELD LIS+K LV++RAKV G EDL A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFILMEHLKGQL--SVSGVPDQSQ-FSALNGSNLLDSSLEKILSIDDIMASICSER-R 120
           ++G +LME+++ ++    S  P   Q  S L+  NLL + ++  + I++I+  IC+++ +
Sbjct: 61  SLGLVLMEYVRKRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKKSK 120

Query: 121 KKPGKRSR 124
           KK  KRSR
Sbjct: 121 KKTRKRSR 128

[Close]
BLAST of Cp4.1LG05g00640 vs. TAIR 10
Match: AT4G00695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 108.6 bits (270), Expect = 3.9e-24
Identity = 63/128 (49.22%), Postives = 92/128 (71.88%), Query Frame = 0 

Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDL-AEKFDLKTLR 60
           MEE  +ILK+NR +D++W CSLSESELD LIS+K LV++RAKV G EDL A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFILMEHLKGQL--SVSGVPDQSQ-FSALNGSNLLDSSLEKILSIDDIMASICSER-R 120
           ++G +LME+++ ++    S  P   Q  S L+  NLL + ++  + I++I+  IC+++ +
Sbjct: 61  SLGLVLMEYVRKRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKKSK 120

Query: 121 KKPGKRSR 124
           KK  KRSR
Sbjct: 121 KKTRKRSR 128

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g00640 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g00640 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023533769.11.84e-83100.00uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo][more]
KAG6606306.15.28e-8398.51hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022931147.11.51e-8298.51uncharacterized protein LOC111437414 [Cucurbita moschata] >XP_022931148.1 unchar... [more]
XP_022995750.18.76e-8297.76uncharacterized protein LOC111491189 [Cucurbita maxima] >XP_022995751.1 uncharac... [more]
KAG7036244.11.72e-8094.96hypothetical protein SDJN02_03046 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Cp4.1LG05g00640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ESQ97.32e-8398.51uncharacterized protein LOC111437414 OS=Cucurbita moschata OX=3662 GN=LOC1114374... [more]
A0A6J1K2S64.24e-8297.76uncharacterized protein LOC111491189 OS=Cucurbita maxima OX=3661 GN=LOC111491189... [more]
A0A6J1DR491.62e-6886.26uncharacterized protein LOC111023068 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A1S3BQH91.99e-6081.30uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=... [more]
A0A5A7UQA13.68e-5980.49Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of Cp4.1LG05g00640 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G80245.11.6e-2546.83Spc97 / Spc98 family of spindle pole body (SBP) component [more]
AT1G80245.21.6e-2546.83Spc97 / Spc98 family of spindle pole body (SBP) component [more]
AT1G80245.31.6e-2546.83Spc97 / Spc98 family of spindle pole body (SBP) component [more]
AT4G00695.13.9e-2449.22FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ... [more]
AT4G00695.23.9e-2449.22FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..134
NoneNo IPR availablePANTHERPTHR48237GAMMA-TUBULIN COMPLEX COMPONENTcoord: 1..127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g00640.1Cp4.1LG05g00640.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0140359 ABC-type transporter activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005319 lipid transporter activity