Cp4.1LG05g00170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g00170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	TPR_REGION domain-containing protein
Location	Cp4.1LG05: 899558 .. 900810 (-)
RNA-Seq Expression	Cp4.1LG05g00170
Synteny	Cp4.1LG05g00170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCGGCTCTCCTCAGAACTGTCTCCATTCCCGTCATCTGGCCGTCCGGCACCGCTTCGTCATCCTTCTCCAATTACAGACCGTTGCATGGAGTTTTCACCGGCCACAAGAGTTCCGTTTCGTCTCCAAAGATCTCTCTGCATTTTGAGATGAATAATCCTAGAGGAAGGAATTCGAGTGGTATACGAAGGGCGTCATCGGAGAGCGACATCTCTCGATCGCTGCATGAGGTTTCGAATCCGTATGATCAATTTGGAGGAGTCGGATCTCGATCTCGGACTCGATCCTCTCATTCTGAAATACCAGAGGAGGAGTTTTTGAACCAGGATGAATTTGACAGTGATTCGATGGAGGACGACTCTGGATGTTTGGATAACGGAATCGGCTGCAGTGATGGCGCTGAATTTTTTACAGATATGTTTTATGACGGAAGTAATGACCGTAATAAGATCGGAGCGTACTACGAAGAGTTGCTGAAGTTGAACCCTAACGACGCTCTGTTACTGAGAAACTACGGAAAATTCTTACATGAGGTAATTGAACATTCGAATTGTCAATTTGAAAGTCTCTTTCAATCTGAAATCGAATGAAATCGGCTCTTGCATTTTACTTTGTTTGATTTGATTTGATTTGATCCATCGTGTAAAGGTGGAGAAAGATCATGTGAGATCAGAGGAATGCTACAGCAGAGCAATATTGGCGAATCCAAGCGACGGAGAGTTGTTGGCTTTGTATGGAAAACTGGTGTGGGAGTCTCACAAAGACAAGCAAAGAGCTGAATATTACTTCGACCGCGCCGTGCGTGCCTCCCCTAACGACTGGTAACTTCCGATCTCTGAATCTAGCAATGTAGCCCTAAATTGTCCGAATTCAATGGCTCTGGTTCTGAATGATTCAGTTTGTGTGTGTAGTTTGGTGATTGGTTATTACGCCTATTTCTTGTGGCAAATTGAAGATGATGAAGAACAAGAGGCGGCGGAGGTATGGCCGGCGGCTATGGTAGCGGCGTTTTAATTGATCAAATGGATTGGGAGACGACAGTTTTGGCAAAATAGGAGAGGAAGAGGCAAGAAAGAAGTGCATGCGATTCCTGAATGGGCATTTGAAGAGGGAACAAAGATTAGCATCCGGGTGCTCTCAATATCTTATTTTATATTTATATTTAAATCACTTTTACCTTTTTTTCTTTTTTTCTTTTTTTCTTTTTTTTCCGTTCCGTAAAAAGTGTAAATTAGACTCTCGGGAAGTG

mRNA sequence

ATGAAATCGGCTCTCCTCAGAACTGTCTCCATTCCCGTCATCTGGCCGTCCGGCACCGCTTCGTCATCCTTCTCCAATTACAGACCGTTGCATGGAGTTTTCACCGGCCACAAGAGTTCCGTTTCGTCTCCAAAGATCTCTCTGCATTTTGAGATGAATAATCCTAGAGGAAGGAATTCGAGTGGTATACGAAGGGCGTCATCGGAGAGCGACATCTCTCGATCGCTGCATGAGGTTTCGAATCCGTATGATCAATTTGGAGGAGTCGGATCTCGATCTCGGACTCGATCCTCTCATTCTGAAATACCAGAGGAGGAGTTTTTGAACCAGGATGAATTTGACAGTGATTCGATGGAGGACGACTCTGGATGTTTGGATAACGGAATCGGCTGCAGTGATGGCGCTGAATTTTTTACAGATATGTTTTATGACGGAAGTAATGACCGTAATAAGATCGGAGCGTACTACGAAGAGTTGCTGAAGTTGAACCCTAACGACGCTCTGTTACTGAGAAACTACGGAAAATTCTTACATGAGGTGGAGAAAGATCATGTGAGATCAGAGGAATGCTACAGCAGAGCAATATTGGCGAATCCAAGCGACGGAGAGTTGTTGGCTTTGTATGGAAAACTGGTGTGGGAGTCTCACAAAGACAAGCAAAGAGCTGAATATTACTTCGACCGCGCCGTGCGTGCCTCCCCTAACGACTGTTTGGTGATTGGTTATTACGCCTATTTCTTGTGGCAAATTGAAGATGATGAAGAACAAGAGGCGGCGGAGGTATGGCCGGCGGCTATGGTAGCGGCGTTTTAATTGATCAAATGGATTGGGAGACGACAGTTTTGGCAAAATAGGAGAGGAAGAGGCAAGAAAGAAGTGCATGCGATTCCTGAATGGGCATTTGAAGAGGGAACAAAGATTAGCATCCGGGTGCTCTCAATATCTTATTTTATATTTATATTTAAATCACTTTTACCTTTTTTTCTTTTTTTCTTTTTTTCTTTTTTTTCCGTTCCGTAAAAAGTGTAAATTAGACTCTCGGGAAGTG

Coding sequence (CDS)

ATGAAATCGGCTCTCCTCAGAACTGTCTCCATTCCCGTCATCTGGCCGTCCGGCACCGCTTCGTCATCCTTCTCCAATTACAGACCGTTGCATGGAGTTTTCACCGGCCACAAGAGTTCCGTTTCGTCTCCAAAGATCTCTCTGCATTTTGAGATGAATAATCCTAGAGGAAGGAATTCGAGTGGTATACGAAGGGCGTCATCGGAGAGCGACATCTCTCGATCGCTGCATGAGGTTTCGAATCCGTATGATCAATTTGGAGGAGTCGGATCTCGATCTCGGACTCGATCCTCTCATTCTGAAATACCAGAGGAGGAGTTTTTGAACCAGGATGAATTTGACAGTGATTCGATGGAGGACGACTCTGGATGTTTGGATAACGGAATCGGCTGCAGTGATGGCGCTGAATTTTTTACAGATATGTTTTATGACGGAAGTAATGACCGTAATAAGATCGGAGCGTACTACGAAGAGTTGCTGAAGTTGAACCCTAACGACGCTCTGTTACTGAGAAACTACGGAAAATTCTTACATGAGGTGGAGAAAGATCATGTGAGATCAGAGGAATGCTACAGCAGAGCAATATTGGCGAATCCAAGCGACGGAGAGTTGTTGGCTTTGTATGGAAAACTGGTGTGGGAGTCTCACAAAGACAAGCAAAGAGCTGAATATTACTTCGACCGCGCCGTGCGTGCCTCCCCTAACGACTGTTTGGTGATTGGTTATTACGCCTATTTCTTGTGGCAAATTGAAGATGATGAAGAACAAGAGGCGGCGGAGGTATGGCCGGCGGCTATGGTAGCGGCGTTTTAA

Protein sequence

MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNSSGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMEDDSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVIGYYAYFLWQIEDDEEQEAAEVWPAAMVAAF

Homology

[Close]

BLAST of Cp4.1LG05g00170 vs. NCBI nr
Match: XP_023532088.1 (uncharacterized protein LOC111794359 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 548 bits (1412), Expect = 8.04e-197
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60
           MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120
           SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120

Query: 121 DSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180
           DSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV
Sbjct: 121 DSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180

Query: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240
           EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI
Sbjct: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240

Query: 241 GYYAYFLWQIEDDEEQEAAEVWPAAMVAAF 270
           GYYAYFLWQIEDDEEQEAAEVWPAAMVAAF
Sbjct: 241 GYYAYFLWQIEDDEEQEAAEVWPAAMVAAF 270

[Close]

BLAST of Cp4.1LG05g00170 vs. NCBI nr
Match: XP_022930988.1 (uncharacterized protein LOC111437316 [Cucurbita moschata] >KAG7036203.1 hypothetical protein SDJN02_03004 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 543 bits (1398), Expect = 1.10e-194
Identity = 267/270 (98.89%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60
           MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120
           SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120

Query: 121 DSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180
           DSGCLD+GIGCSDGAEFFTD FYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV
Sbjct: 121 DSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180

Query: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240
           EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI
Sbjct: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240

Query: 241 GYYAYFLWQIEDDEEQEAAEVWPAAMVAAF 270
           GYYAYFLWQIEDDEE+EAAEVWPAAMVAAF
Sbjct: 241 GYYAYFLWQIEDDEEEEAAEVWPAAMVAAF 270

[Close]

BLAST of Cp4.1LG05g00170 vs. NCBI nr
Match: KAG6606262.1 (hypothetical protein SDJN03_03579, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 540 bits (1391), Expect = 1.28e-193
Identity = 266/270 (98.52%), Postives = 268/270 (99.26%), Query Frame = 0


Query: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60
           MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120
           SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLN DEFDSDSMED
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNLDEFDSDSMED 120

Query: 121 DSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180
           DSGCLD+GIGCSDGAEFFTD FYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV
Sbjct: 121 DSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180

Query: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240
           EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI
Sbjct: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240

Query: 241 GYYAYFLWQIEDDEEQEAAEVWPAAMVAAF 270
           GYYAYFLWQIEDDEE+EAAEVWPAAMVAAF
Sbjct: 241 GYYAYFLWQIEDDEEEEAAEVWPAAMVAAF 270

[Close]

BLAST of Cp4.1LG05g00170 vs. NCBI nr
Match: XP_022995940.1 (uncharacterized protein LOC111491305 [Cucurbita maxima])

HSP 1 Score: 526 bits (1355), Expect = 3.94e-188
Identity = 262/270 (97.04%), Postives = 264/270 (97.78%), Query Frame = 0


Query: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60
           MKSAL RTVSIPVI PSGTASSSFSNYRPLHGVFTGHKSSVSSPKISL FEMNNPRGRNS
Sbjct: 1   MKSALFRTVSIPVISPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLLFEMNNPRGRNS 60

Query: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120
           SGIRR SSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSME+
Sbjct: 61  SGIRRVSSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMEE 120

Query: 121 DSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180
           DSGCLD+GIGCSDGAEFFTD FYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV
Sbjct: 121 DSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180

Query: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240
           EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI
Sbjct: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240

Query: 241 GYYAYFLWQIEDDEEQEAAEVWPAAMVAAF 270
           G YAYFLWQIEDDEEQEAAEVWPAAMVAAF
Sbjct: 241 GCYAYFLWQIEDDEEQEAAEVWPAAMVAAF 270

[Close]

BLAST of Cp4.1LG05g00170 vs. NCBI nr
Match: XP_022963763.1 (uncharacterized protein LOC111463957 [Cucurbita moschata])

HSP 1 Score: 361 bits (927), Expect = 5.86e-123
Identity = 190/273 (69.60%), Postives = 225/273 (82.42%), Query Frame = 0


Query: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60
           M+SAL+RTVS+PV+  +  ASSSFSNY+PL+G  +G  SS+SSPKISLHFE+N+ RG+N 
Sbjct: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60

Query: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120
           SGIRRA+SESDISRSLHEVS+PYDQFGG   RSR  S  SEIPE+EFLNQDEF  DS   
Sbjct: 61  SGIRRAASESDISRSLHEVSSPYDQFGGF--RSRYWSVPSEIPEDEFLNQDEFHRDSFA- 120

Query: 121 DSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180
           D+  L++GI   DG +F  D F DGS++ +KI AYYEE+LK NP+DAL+LRNYGKFLHEV
Sbjct: 121 DTEFLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEV 180

Query: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240
           EKD  R+EECYSRAILA+P DGELLALYGKLVW++ +DK+RA+YYFDRAV ASPNDCLVI
Sbjct: 181 EKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVI 240

Query: 241 GYYAYFLWQIEDDEEQEAAEVWPA---AMVAAF 270
           GYYA+FLW +EDDEE EA  V PA   A+VAAF
Sbjct: 241 GYYAHFLWLVEDDEE-EATAVAPAPAPALVAAF 269

[Close]

BLAST of Cp4.1LG05g00170 vs. ExPASy TrEMBL
Match: A0A6J1EX26 (uncharacterized protein LOC111437316 OS=Cucurbita moschata OX=3662 GN=LOC111437316 PE=4 SV=1)

HSP 1 Score: 543 bits (1398), Expect = 5.31e-195
Identity = 267/270 (98.89%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60
           MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120
           SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120

Query: 121 DSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180
           DSGCLD+GIGCSDGAEFFTD FYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV
Sbjct: 121 DSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180

Query: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240
           EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI
Sbjct: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240

Query: 241 GYYAYFLWQIEDDEEQEAAEVWPAAMVAAF 270
           GYYAYFLWQIEDDEE+EAAEVWPAAMVAAF
Sbjct: 241 GYYAYFLWQIEDDEEEEAAEVWPAAMVAAF 270

[Close]

BLAST of Cp4.1LG05g00170 vs. ExPASy TrEMBL
Match: A0A6J1K5B2 (uncharacterized protein LOC111491305 OS=Cucurbita maxima OX=3661 GN=LOC111491305 PE=4 SV=1)

HSP 1 Score: 526 bits (1355), Expect = 1.91e-188
Identity = 262/270 (97.04%), Postives = 264/270 (97.78%), Query Frame = 0


Query: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60
           MKSAL RTVSIPVI PSGTASSSFSNYRPLHGVFTGHKSSVSSPKISL FEMNNPRGRNS
Sbjct: 1   MKSALFRTVSIPVISPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLLFEMNNPRGRNS 60

Query: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120
           SGIRR SSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSME+
Sbjct: 61  SGIRRVSSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMEE 120

Query: 121 DSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180
           DSGCLD+GIGCSDGAEFFTD FYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV
Sbjct: 121 DSGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180

Query: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240
           EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI
Sbjct: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240

Query: 241 GYYAYFLWQIEDDEEQEAAEVWPAAMVAAF 270
           G YAYFLWQIEDDEEQEAAEVWPAAMVAAF
Sbjct: 241 GCYAYFLWQIEDDEEQEAAEVWPAAMVAAF 270

[Close]

BLAST of Cp4.1LG05g00170 vs. ExPASy TrEMBL
Match: A0A6J1HIV3 (uncharacterized protein LOC111463957 OS=Cucurbita moschata OX=3662 GN=LOC111463957 PE=4 SV=1)

HSP 1 Score: 361 bits (927), Expect = 2.84e-123
Identity = 190/273 (69.60%), Postives = 225/273 (82.42%), Query Frame = 0


Query: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60
           M+SAL+RTVS+PV+  +  ASSSFSNY+PL+G  +G  SS+SSPKISLHFE+N+ RG+N 
Sbjct: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60

Query: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120
           SGIRRA+SESDISRSLHEVS+PYDQFGG   RSR  S  SEIPE+EFLNQDEF  DS   
Sbjct: 61  SGIRRAASESDISRSLHEVSSPYDQFGGF--RSRYWSVPSEIPEDEFLNQDEFHRDSFA- 120

Query: 121 DSGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEV 180
           D+  L++GI   DG +F  D F DGS++ +KI AYYEE+LK NP+DAL+LRNYGKFLHEV
Sbjct: 121 DTEFLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYEEMLKSNPSDALILRNYGKFLHEV 180

Query: 181 EKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVI 240
           EKD  R+EECYSRAILA+P DGELLALYGKLVW++ +DK+RA+YYFDRAV ASPNDCLVI
Sbjct: 181 EKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLVI 240

Query: 241 GYYAYFLWQIEDDEEQEAAEVWPA---AMVAAF 270
           GYYA+FLW +EDDEE EA  V PA   A+VAAF
Sbjct: 241 GYYAHFLWLVEDDEE-EATAVAPAPAPALVAAF 269

[Close]

BLAST of Cp4.1LG05g00170 vs. ExPASy TrEMBL
Match: A0A6J1HRN2 (uncharacterized protein LOC111466874 OS=Cucurbita maxima OX=3661 GN=LOC111466874 PE=4 SV=1)

HSP 1 Score: 353 bits (906), Expect = 4.59e-120
Identity = 188/273 (68.86%), Postives = 225/273 (82.42%), Query Frame = 0


Query: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60
           M+SAL+RTVS+PV+  +  ASSSFSNY+PL+G  +G  SS+SSPKISLHFE+N+ RG+N 
Sbjct: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60

Query: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFDSDSMED 120
           SGIRRA+SESDISRSLHEVS+PYDQFGG   RSR  S  S IPEEEFLNQDEF  DS+  
Sbjct: 61  SGIRRAASESDISRSLHEVSSPYDQFGGF--RSRYWSVPSGIPEEEFLNQDEFHRDSVA- 120

Query: 121 DSGCLDNGIGCSDGAEFF-TDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHE 180
           D+  L++GI   DG +F  TD F DGS++ +KI AYYEE+LK NP+D L+LRNYGKFLHE
Sbjct: 121 DTEFLNSGIVSGDGGDFVATDKFTDGSSESSKIRAYYEEMLKSNPSDPLILRNYGKFLHE 180

Query: 181 VEKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLV 240
           VEKD  R+EECYSRAILA+P DGELLALYGKLVW++ +DK+RA+YYFDRAV ASPNDCLV
Sbjct: 181 VEKDTKRAEECYSRAILASPRDGELLALYGKLVWDTQRDKRRAQYYFDRAVCASPNDCLV 240

Query: 241 IGYYAYFLWQIEDDEEQEAA-EVWPA-AMVAAF 270
           IGYYA+FLW +EDDEE+  A  + PA A+VAAF
Sbjct: 241 IGYYAHFLWLVEDDEEEATAVALAPAPALVAAF 270

[Close]

BLAST of Cp4.1LG05g00170 vs. ExPASy TrEMBL
Match: A0A6J1DU99 (uncharacterized protein LOC111023531 OS=Momordica charantia OX=3673 GN=LOC111023531 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 9.62e-106
Identity = 182/305 (59.67%), Postives = 213/305 (69.84%), Query Frame = 0


Query: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60
           MKSAL RT S+PVI P+G  S SFSNYRP H      KS VSSPKISLHFE+N+ RG  S
Sbjct: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPFH------KSYVSSPKISLHFEINHRRGAKS 60

Query: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQ---------- 120
           SGIRRASSESDI+RSLH++SN YDQ GGVGSRS      S IPE+EFLN+          
Sbjct: 61  SGIRRASSESDIARSLHQISNRYDQLGGVGSRSFP----SGIPEDEFLNESRDAVAEEWI 120

Query: 121 -----DEFDSDSMEDD----------SGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAY 180
                DEFD  +   D          +G   +GIG   G    TD F  GS+DR+KIGAY
Sbjct: 121 IQEDEDEFDISNYAGDFSGGAISMKNAGFFGSGIGS--GGNIVTDTFSGGSSDRSKIGAY 180

Query: 181 YEELLKLNPNDALLLRNYGKFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWES 240
           YEE+LKLNP+D+LLLRNYGKFLHEVE D VR+EE Y RAILA+P DGELL+LYGKLVWE+
Sbjct: 181 YEEMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWET 240

Query: 241 HKDKQRAEYYFDRAVRASPNDCLVIGYYAYFLWQIEDDEEQEA----------AEVWPAA 270
            +D+QRA+ YFDRAV ASP+DC V+G YA+FLW++E DEE+E           AEV PAA
Sbjct: 241 QRDEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEAAAAEKAEVPPAA 293

[Close]

BLAST of Cp4.1LG05g00170 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 4.9e-42
Identity = 112/285 (39.30%), Postives = 162/285 (56.84%), Query Frame = 0


Query: 1   MKSALLRTVSIPVIWP---SGTASSSFSNYRPLHGV--FTGHKSSVSSPKISLHFEMNNP 60
           MKS L+RT S+PV+     SG +S   +     + V   + +    +  KIS+  + N  
Sbjct: 1   MKSLLMRTGSMPVLQNRLISGGSSRKMTPISRTNSVESLSSYGERFAGGKISIEVKAN-- 60

Query: 61  RGRNSSGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLNQDEFD- 120
                 G+RR  SESD+ RS   +         VGS    + S + IPE++   ++E   
Sbjct: 61  -----VGMRRVLSESDVIRSERMLKR-------VGS----KPSPARIPEDDEAGEEEIRF 120

Query: 121 --------SDSMEDDSGCLDNGIGCSDGAEF---FTDMFYDGSNDRNKIGAYYEELLKLN 180
                   S  +  +  C   G G   G+ +   + +    G  D++KIG YY E+L+ N
Sbjct: 121 ADGWGSMISGGLPVEEKCFTGG-GVGGGSGYSGGYGNGGGGGYEDKSKIGDYYREMLRSN 180

Query: 181 PNDALLLRNYGKFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWESHKDKQRAE 240
           PN++LLL NYGKFL+EVEKD   +EE Y RAIL NP DGE L++YG+L+WE+ +D++RA+
Sbjct: 181 PNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWETKRDEKRAQ 240

Query: 241 YYFDRAVRASPNDCLVIGYYAYFLWQIE---DDEEQEAAEVWPAA 266
            YFD+AV ASPNDC+V+G YA F+W+ E   DD+E+E  E W AA
Sbjct: 241 GYFDQAVNASPNDCMVLGSYARFMWEAEDDDDDDEEEEEEEWMAA 266

[Close]

BLAST of Cp4.1LG05g00170 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 4.8e-29
Identity = 56/117 (47.86%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 144 DGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEVEKDHVRSEECYSRAILANPSDGE 203
           DG +D   +  +Y ++++ NP + + L NY KFL EV KD++++EE   RAIL +P+DG 
Sbjct: 150 DGGDDNTDV--HYRKMIEANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGN 209

Query: 204 LLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVIGYYAYFLWQIEDDEEQEAAE 261
           +LA+Y +LVW+ HKD  RAE YF++AV A+P DC V   YA FLW  E++EE+E  E
Sbjct: 210 VLAMYAELVWKIHKDSSRAENYFNQAVAAAPEDCYVQASYARFLWDAEEEEEEEKEE 264

[Close]

BLAST of Cp4.1LG05g00170 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 2.2e-26
Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 144 DGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEVEKDHVRSEECYSRAILANPSDGE 203
           DG    +    YY E++  NP ++LL  NY KFL EV+ D  ++EE   RAIL N +DG 
Sbjct: 157 DGGRSEDATDTYYREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGN 216

Query: 204 LLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVIGYYAYFLWQIEDDEEQEA 259
           +L+LY  L+  +H+D+QRA  Y+ +AV+ SP DC V   YA FLW +++DEE EA
Sbjct: 217 VLSLYADLILHNHQDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDEEDEA 271

[Close]

BLAST of Cp4.1LG05g00170 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 52/117 (44.44%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 145 GSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEVEKDHVRSEECYSRAILANPS-DGE 204
           G      +  YYEE+++  P D LLL NY +FL EV+ D  ++EE   RA+L+    DGE
Sbjct: 103 GGGGGGSVDGYYEEMIQRYPGDTLLLSNYARFLKEVKGDGRKAEEYCERAMLSESGRDGE 162

Query: 205 LLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVIGYYAYFLWQIEDDEEQEAAE 261
           LL++YG L+W++H D  RA+ Y+D+AV++SP+DC V+  YA FLW  E++ E+E ++
Sbjct: 163 LLSMYGDLIWKNHGDGVRAQSYYDQAVQSSPDDCNVLASYARFLWDAEEEVEEEESK 219

[Close]

BLAST of Cp4.1LG05g00170 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-21
Identity = 55/124 (44.35%), Postives = 80/124 (64.52%), Query Frame = 0


Query: 134 GAEFFTDMFYDGSNDRNKIGAYYEELLKLNPNDALLLRNYGKFLHEVEKDHVRSEECYSR 193
           G+E   D+   G +D+N  G YY+ +L+  P   LLL+NY KFL E + D   +EE Y +
Sbjct: 106 GSEIKFDL--PGYDDKN-CGDYYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHK 165

Query: 194 AILANPSDGELLALYGKLVWESHKDKQRAEYYFDRAVRASPNDCLVIGYYAYFLWQIEDD 253
             +  PSDG  LA YG+LV + H+D+ +A  YF+RAV+ASP+D +V+  YA FLW+I  D
Sbjct: 166 CTVVEPSDGVALANYGRLVMKLHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINAD 225

Query: 254 EEQE 258
           ++ E
Sbjct: 226 DDDE 225

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g00170 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG05g00170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532088.1	8.04e-197	100.00	uncharacterized protein LOC111794359 [Cucurbita pepo subsp. pepo]	[more]
XP_022930988.1	1.10e-194	98.89	uncharacterized protein LOC111437316 [Cucurbita moschata] >KAG7036203.1 hypothet...	[more]
KAG6606262.1	1.28e-193	98.52	hypothetical protein SDJN03_03579, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022995940.1	3.94e-188	97.04	uncharacterized protein LOC111491305 [Cucurbita maxima]	[more]
XP_022963763.1	5.86e-123	69.60	uncharacterized protein LOC111463957 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG05g00170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EX26	5.31e-195	98.89	uncharacterized protein LOC111437316 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1K5B2	1.91e-188	97.04	uncharacterized protein LOC111491305 OS=Cucurbita maxima OX=3661 GN=LOC111491305...	[more]
A0A6J1HIV3	2.84e-123	69.60	uncharacterized protein LOC111463957 OS=Cucurbita moschata OX=3662 GN=LOC1114639...	[more]
A0A6J1HRN2	4.59e-120	68.86	uncharacterized protein LOC111466874 OS=Cucurbita maxima OX=3661 GN=LOC111466874...	[more]
A0A6J1DU99	9.62e-106	59.67	uncharacterized protein LOC111023531 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Cp4.1LG05g00170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17940.1	4.9e-42	39.30	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G20190.1	4.8e-29	47.86	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80130.1	2.2e-26	46.09	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	1.9e-25	44.44	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	1.6e-21	44.35	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 135..247 e-value: 3.2E-13 score: 51.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 147..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..96
None	No IPR available	PANTHER	PTHR26312:SF123	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 1..258
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g00170.1	Cp4.1LG05g00170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding