Cp4.1LG04g16420 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g16420
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Membrane-anchored ubiquitin-fold protein
Location	Cp4.1LG04: 12620166 .. 12621479 (-)
RNA-Seq Expression	Cp4.1LG04g16420
Synteny	Cp4.1LG04g16420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAATACAGGACAATAAGCGTCGCAAGGTATTCCCGATTCCACGCCCATTGATGCTCGACCTGCTGATTCAGAAGAAATTCAACCGCAAACACTTAAAACGACATCGTATGGTTCCAAAGCGCAGCGACGTCGGACCAAATGCCAGAGAGAGTGCTGAAGACCGCGTCCTTTCTCCACCTCAATAATATTAATAGATACATCAATTTAAAAATAATGATAATAATAATAATAATCTTCTGGCTGGTTTTGAAAGAACCGCCTCCCAACCTCTTCCCTCTGGTAGTCTCCTCTTTTGACTTTCTAAAGAGTTTATTTCCTTTCCGGATCGTTTTTGGTATTCACATCCATAATCCTTTTAGCTTCTTTGCTATTGGAATTGCTGTGCGCCTCCTAGGGCACCGGATTACTTGAGCGCGTTTCCTTATCAATCCGACGTCGGGATCACACACTCGAACAATTTCCGAGGAATACTCTAATCAGATGCCGGAGGACGATTTGATTGACATCAAGTTCAGGCTGTACGATGGTTCTGATGTTGGACCATTTCGATACTCCTCCGCCTCGACGGTTGATGTGCTTAAGCAGAGAATAGTGTCTGATTGGCCCAAAGGTTGGGACCTTACTCTTCATTATTCTCCCTTGTAGATACTTTATTAGCGTGATTTCTGACATTTGGATATCTTTCATCATTCTTTCACAAAAATGCATATGTGATTACGGTGTTCTCTATTCTATGTAGCAGATCTCTTGATCTTTTTTCTTTTAAGTCCCTTCCTTTACTTGTGTGCTTCTGGACGTATGTGGAATTGTTAATATCTATCGGTTCTATTAGAAGCTGTTGAAATCCAACTCTTACACACGTAGTTTGGAGTCTCTTATTAACATACTTCATTCTCTAGATTTCTCCCGAACACGCTCTATGAATTGGTCAATATATTAATTCTTTTTTTCTTTTTACCTTTCGGTTTATTTATTTATTTTTATTTTTATTTTTTTGTTAGGCAAAACAGTCACTCCAAAGGCAGCCAGTGAAGTAAAACTGATCAGTTCGGGCAAAATTTTGGAAAATAATAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACGGGAGGAGTTATTATAATGCATGTTGTTGTACAACCATCCCTAGCAAAAGCCAAGACAGGTGATTTTCGTTGTGATTTTAGTTATATATATAATTTCTTGTCCATAGATCGTTCCTCTTTACATTTTACTTTTATATGTTTTCGTTTACCTTTTCTGCATTATTCTATAGTTTGCCAACTTGTATGGTCGTGGTCTTGA

mRNA sequence

AACAATACAGGACAATAAGCGTCGCAAGGTATTCCCGATTCCACGCCCATTGATGCTCGACCTGCTGATTCAGAAGAAATTCAACCGCAAACACTTAAAACGACATCGTATGGTTCCAAAGCGCAGCGACGTCGGACCAAATGCCAGAGAGAGTGCTGAAGACCGCGTCCTTTCTCCACCTCAATAATATTAATAGATACATCAATTTAAAAATAATGATAATAATAATAATAATCTTCTGGCTGGTTTTGAAAGAACCGCCTCCCAACCTCTTCCCTCTGGTAGTCTCCTCTTTTGACTTTCTAAAGAGTTTATTTCCTTTCCGGATCGTTTTTGGTATTCACATCCATAATCCTTTTAGCTTCTTTGCTATTGGAATTGCTGTGCGCCTCCTAGGGCACCGGATTACTTGAGCGCGTTTCCTTATCAATCCGACGTCGGGATCACACACTCGAACAATTTCCGAGGAATACTCTAATCAGATGCCGGAGGACGATTTGATTGACATCAAGTTCAGGCTGTACGATGGTTCTGATGTTGGACCATTTCGATACTCCTCCGCCTCGACGGTTGATGTGCTTAAGCAGAGAATAGTGTCTGATTGGCCCAAAGGCAAAACAGTCACTCCAAAGGCAGCCAGTGAAGTAAAACTGATCAGTTCGGGCAAAATTTTGGAAAATAATAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACGGGAGGAGTTATTATAATGCATGTTGTTGTACAACCATCCCTAGCAAAAGCCAAGACAGTTTGCCAACTTGTATGGTCGTGGTCTTGA

Coding sequence (CDS)

ATGCCGGAGGACGATTTGATTGACATCAAGTTCAGGCTGTACGATGGTTCTGATGTTGGACCATTTCGATACTCCTCCGCCTCGACGGTTGATGTGCTTAAGCAGAGAATAGTGTCTGATTGGCCCAAAGGCAAAACAGTCACTCCAAAGGCAGCCAGTGAAGTAAAACTGATCAGTTCGGGCAAAATTTTGGAAAATAATAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACGGGAGGAGTTATTATAATGCATGTTGTTGTACAACCATCCCTAGCAAAAGCCAAGACAGTTTGCCAACTTGTATGGTCGTGGTCTTGA

Protein sequence

MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTVCQLVWSWS

Homology

[Close]

BLAST of Cp4.1LG04g16420 vs. ExPASy Swiss-Prot
Match: Q9SW27 (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-44
Identity = 83/100 (83.00%), Postives = 92/100 (92.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPE++ IDIKFRLYDGSD+GPFRYS+ASTVD LKQR+VSDWPKGKTV PK  +EVKLISS
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKT 101
           GKILENNKTVGQCK PFG+  GGVI+MHVVVQPSLAK+KT
Sbjct: 61  GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKT 100

[Close]

BLAST of Cp4.1LG04g16420 vs. ExPASy Swiss-Prot
Match: Q9LSD8 (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.8e-33
Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPE+DL+++KFRLYDGSDVGPF+YS  +TV +LK+RIVS+WPK K + PK+AS++KLI++
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAK 100
           GKILEN KTV QCK PF +    VI MHVVVQ S  KA+
Sbjct: 61  GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKAR 99

[Close]

BLAST of Cp4.1LG04g16420 vs. ExPASy Swiss-Prot
Match: Q7XRU4 (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB4 PE=2 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-28
Identity = 57/97 (58.76%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 4   DDLIDIKFRLYDGSDVGPFRYSS-ASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISSGK 63
           D+ +++KFRL+DGSD+GP R ++ A+TV  LK R+V+DWPK KT+ PK A++VKLIS GK
Sbjct: 20  DEEVEVKFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKDKTIVPKTANDVKLISGGK 79

Query: 64  ILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAK 100
           ILEN+K + QC+ PFG+     I MHVVVQPS AK+K
Sbjct: 80  ILENDKNIAQCRAPFGDLPSTAITMHVVVQPSSAKSK 116

[Close]

BLAST of Cp4.1LG04g16420 vs. ExPASy Swiss-Prot
Match: Q6Z8K4 (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23
Identity = 45/87 (51.72%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 7  IDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISSGKILEN 66
          I++KFRL+DG+D+GP +Y  ++TV  LK+ I++ WP+ K +TPK  +++KLI++G+ILEN
Sbjct: 8  IEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQDKEITPKTVNDLKLINAGRILEN 67

Query: 67 NKTVGQCKLPFGEFTGGVIIMHVVVQP 94
          N+T+ + ++P GE  GGVI MHVVV+P
Sbjct: 68 NRTLAESRVPVGEVPGGVITMHVVVRP 94

[Close]

BLAST of Cp4.1LG04g16420 vs. ExPASy Swiss-Prot
Match: Q8LCS8 (Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MUB2 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.5e-23
Identity = 48/88 (54.55%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 5  DLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISSGKIL 64
          D ++IKFRL DGSD+GP  +  A+TV  LK+ +V+ WP+ K   PK   +VKLIS+G+IL
Sbjct: 6  DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRIL 65

Query: 65 ENNKTVGQCKLPFGEFTGGVIIMHVVVQ 93
          ENNKTVG C+ P G F+G V  MHV++Q
Sbjct: 66 ENNKTVGDCRSPVGNFSGAVTTMHVIIQ 93

[Close]

BLAST of Cp4.1LG04g16420 vs. NCBI nr
Match: XP_022932445.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 221 bits (563), Expect = 1.13e-72
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTVCQLVWSW 108
           GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTVCQLVWSW
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTVCQLVWSW 108

[Close]

BLAST of Cp4.1LG04g16420 vs. NCBI nr
Match: XP_023004889.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 219 bits (559), Expect = 7.03e-72
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTVCQLVWSWS 109
           GKILENNKTVGQCKLPFGE TGGVIIMHVVVQPSLAKAKTVCQLVWSWS
Sbjct: 61  GKILENNKTVGQCKLPFGESTGGVIIMHVVVQPSLAKAKTVCQLVWSWS 109

[Close]

BLAST of Cp4.1LG04g16420 vs. NCBI nr
Match: KAG7021382.1 (Membrane-anchored ubiquitin-fold protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203 bits (517), Expect = 1.22e-65
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTV 101
           GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTV
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTV 101

[Close]

BLAST of Cp4.1LG04g16420 vs. NCBI nr
Match: XP_022932437.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita moschata] >XP_023531891.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >KAG6587398.1 Membrane-anchored ubiquitin-fold protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202 bits (514), Expect = 4.66e-65
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKT 100
           GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKT 100

[Close]

BLAST of Cp4.1LG04g16420 vs. NCBI nr
Match: KAA0057753.1 (membrane-anchored ubiquitin-fold protein 3 [Cucumis melo var. makuwa] >TYJ98433.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (506), Expect = 4.78e-64
Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSD+GPFRYSSAST+DVLKQRIVSDWPKGKT+TPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKT 100
           GKILENNKTVGQCKLPFGEFTGGV IMHVVVQPSLAKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKT 100

[Close]

BLAST of Cp4.1LG04g16420 vs. ExPASy TrEMBL
Match: A0A6J1F278 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111438857 PE=4 SV=1)

HSP 1 Score: 221 bits (563), Expect = 5.47e-73
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTVCQLVWSW 108
           GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTVCQLVWSW
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTVCQLVWSW 108

[Close]

BLAST of Cp4.1LG04g16420 vs. ExPASy TrEMBL
Match: A0A6J1KXL0 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC111498064 PE=4 SV=1)

HSP 1 Score: 219 bits (559), Expect = 3.40e-72
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKTVCQLVWSWS 109
           GKILENNKTVGQCKLPFGE TGGVIIMHVVVQPSLAKAKTVCQLVWSWS
Sbjct: 61  GKILENNKTVGQCKLPFGESTGGVIIMHVVVQPSLAKAKTVCQLVWSWS 109

[Close]

BLAST of Cp4.1LG04g16420 vs. ExPASy TrEMBL
Match: A0A6J1EWN9 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111438857 PE=4 SV=1)

HSP 1 Score: 202 bits (514), Expect = 2.26e-65
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKT 100
           GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKT 100

[Close]

BLAST of Cp4.1LG04g16420 vs. ExPASy TrEMBL
Match: A0A5A7UPG7 (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00340 PE=4 SV=1)

HSP 1 Score: 199 bits (506), Expect = 2.31e-64
Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSD+GPFRYSSAST+DVLKQRIVSDWPKGKT+TPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKT 100
           GKILENNKTVGQCKLPFGEFTGGV IMHVVVQPSLAKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKT 100

[Close]

BLAST of Cp4.1LG04g16420 vs. ExPASy TrEMBL
Match: A0A6J1IG02 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC111472981 PE=4 SV=1)

HSP 1 Score: 199 bits (506), Expect = 3.62e-64
Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSD+GPFRYSSAST+DVLKQRIVSDWPKGKT+TPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKT 100
           GKILENNKTVGQCKLPFGEFTGGV IMHVVVQPSLAKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKT 100

[Close]

BLAST of Cp4.1LG04g16420 vs. TAIR 10
Match: AT4G24990.1 (Ubiquitin family protein )

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-45
Identity = 83/100 (83.00%), Postives = 92/100 (92.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPE++ IDIKFRLYDGSD+GPFRYS+ASTVD LKQR+VSDWPKGKTV PK  +EVKLISS
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKT 101
           GKILENNKTVGQCK PFG+  GGVI+MHVVVQPSLAK+KT
Sbjct: 61  GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKT 100

[Close]

BLAST of Cp4.1LG04g16420 vs. TAIR 10
Match: AT3G26980.1 (membrane-anchored ubiquitin-fold protein 4 precursor )

HSP 1 Score: 141.7 bits (356), Expect = 3.4e-34
Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           MPE+DL+++KFRLYDGSDVGPF+YS  +TV +LK+RIVS+WPK K + PK+AS++KLI++
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAK 100
           GKILEN KTV QCK PF +    VI MHVVVQ S  KA+
Sbjct: 61  GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKAR 99

[Close]

BLAST of Cp4.1LG04g16420 vs. TAIR 10
Match: AT5G15460.1 (membrane-anchored ubiquitin-fold protein 2 )

HSP 1 Score: 108.6 bits (270), Expect = 3.2e-24
Identity = 48/88 (54.55%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 5  DLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISSGKIL 64
          D ++IKFRL DGSD+GP  +  A+TV  LK+ +V+ WP+ K   PK   +VKLIS+G+IL
Sbjct: 6  DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRIL 65

Query: 65 ENNKTVGQCKLPFGEFTGGVIIMHVVVQ 93
          ENNKTVG C+ P G F+G V  MHV++Q
Sbjct: 66 ENNKTVGDCRSPVGNFSGAVTTMHVIIQ 93

[Close]

BLAST of Cp4.1LG04g16420 vs. TAIR 10
Match: AT5G15460.2 (membrane-anchored ubiquitin-fold protein 2 )

HSP 1 Score: 108.6 bits (270), Expect = 3.2e-24
Identity = 48/88 (54.55%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 5  DLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISSGKIL 64
          D ++IKFRL DGSD+GP  +  A+TV  LK+ +V+ WP+ K   PK   +VKLIS+G+IL
Sbjct: 6  DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRIL 65

Query: 65 ENNKTVGQCKLPFGEFTGGVIIMHVVVQ 93
          ENNKTVG C+ P G F+G V  MHV++Q
Sbjct: 66 ENNKTVGDCRSPVGNFSGAVTTMHVIIQ 93

[Close]

BLAST of Cp4.1LG04g16420 vs. TAIR 10
Match: AT1G77870.1 (membrane-anchored ubiquitin-fold protein 5 precursor )

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-23
Identity = 51/101 (50.50%), Postives = 71/101 (70.30%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60
           M ++DLI++KFRL DG+D+GP +YS   TV  LK++I++ WPK K   PK  +EVKLI+ 
Sbjct: 1   MGDEDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLING 60

Query: 61  GKILENNKTVGQCK--LPFGEFTGGVIIMHVVVQPSLAKAK 100
           GKILENNKT+ + +  +  GE  G V  MHVV++P L + K
Sbjct: 61  GKILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEKK 101

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g16420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SW27	2.1e-44	83.00	Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q9LSD8	4.8e-33	64.65	Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q7XRU4	1.6e-28	58.76	Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q6Z8K4	1.5e-23	51.72	Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q8LCS8	4.5e-23	54.55	Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]

BLAST of Cp4.1LG04g16420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932445.1	1.13e-72	100.00	membrane-anchored ubiquitin-fold protein 3-like isoform X2 [Cucurbita moschata]	[more]
XP_023004889.1	7.03e-72	99.08	membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima]	[more]
KAG7021382.1	1.22e-65	100.00	Membrane-anchored ubiquitin-fold protein 3 [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022932437.1	4.66e-65	100.00	membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita moschata] ...	[more]
KAA0057753.1	4.78e-64	96.00	membrane-anchored ubiquitin-fold protein 3 [Cucumis melo var. makuwa] >TYJ98433....	[more]

BLAST of Cp4.1LG04g16420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F278	5.47e-73	100.00	Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KXL0	3.40e-72	99.08	Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1EWN9	2.26e-65	100.00	Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5A7UPG7	2.31e-64	96.00	Membrane-anchored ubiquitin-fold protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1IG02	3.62e-64	96.00	Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]

BLAST of Cp4.1LG04g16420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24990.1	1.5e-45	83.00	Ubiquitin family protein	[more]
AT3G26980.1	3.4e-34	64.65	membrane-anchored ubiquitin-fold protein 4 precursor	[more]
AT5G15460.1	3.2e-24	54.55	membrane-anchored ubiquitin-fold protein 2	[more]
AT5G15460.2	3.2e-24	54.55	membrane-anchored ubiquitin-fold protein 2	[more]
AT1G77870.1	1.2e-23	50.50	membrane-anchored ubiquitin-fold protein 5 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 1..100 e-value: 4.9E-41 score: 140.9
None	No IPR available	PANTHER	PTHR13169:SF3	MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3	coord: 1..101
None	No IPR available	CDD	cd01814	Ubl_MUBs_plant	coord: 6..93 e-value: 9.66387E-45 score: 138.281
IPR017000	Membrane-anchored ubiquitin-fold protein	PIRSF	PIRSF032572	MUB	coord: 1..105 e-value: 1.5E-42 score: 142.2
IPR039540	UBL3-like, ubiquitin domain	PFAM	PF13881	Rad60-SLD_2	coord: 6..99 e-value: 2.4E-37 score: 127.4
IPR040015	UBL3-like	PANTHER	PTHR13169	UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN	coord: 1..101
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 7..75 score: 10.46229
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 2..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g16420.1	Cp4.1LG04g16420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005515	protein binding