Cp4.1LG04g16320 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACGGCCCATTTATGTTTAAAGCCCATATGATTACCCATCTTTGGCCCATTGAACAACAAAGCCAGGTGATCGTATCGCCCTCTCCGACTTGCCATCAGCTGAATCACAGACCACGCTCGCTTCTGCTCTAGAAATGGCAGCTCTATCTCGCTTTTCCAGGAAGGCAATAGCCTCGGCGGTTGCGACTAATCAACTCCGCCGCGCTTTCTCGACGGAAGTGTCGAAAACGATTGCGCCCTCACCGGATCGAGTCAAGTGGGACTATAGAGGTCAAAGAAAGATAATCCCGCTTGGCCAGTGGCTCCCCAAAATTGCCGTCGACGCCTATGTTGCGCCTAATGTTGTCCTCGCCGGACAGGTCAACGTCTGCGACGGGGCCTCCGTTTGGGCGGGTTCCGTTCTCCGCGGCGATCTCAACAAGATCACCGTCGGGTTTTGCTCTAATGTACAGGAACGGTGCGTCCTTCATGCTGCTTGGTCCTCTCCAACAGGTTCATTTCGACTTACATATTTTTATCTGGTTTTTTTTCCTATCATTTTCAGATTTTGGTTTTTTATCGAATTTGGTTGTTTGGTGATTGGTTTCCTCGGTTCTGTATGTAGTTGAGAAAAGGGTTCCTGATAATTGCATACGCAAAGGGTTCCTGATAATTGCATACGCAATTTTCTGTTTCTTAAATTATCAATTCCAGGGGAATAGTGATTGATTCTGTACAATTATTTAGAAATTTTGAAATTATGTACCTGCTCTGTAGCAGTGTAGATAAACAATCAATTTAAGTGTCTAGATTATGGTTTTCTGGAGACTCAATAGATTCGAGTAATTGGAGTTAGTGGCCCTGAGAAATACACGACCTAATTTCTACGGATTCTTTATTGACTTGATGGGAAACTGATTGATATTTAATGAGAAACTGATTGATATTCTTCTGTTAATCTCCCTACATGCTCCACAATATTTTCAATCAATCCAAGCATTGTTCTCCACTCTTTATGTACAGTGAAGCATAGCATACTCAATAAATACGGTTCCTATAGGAATATTAAGTTTTAACTAAGAGGTTATTCAATCTAGTATCTCTTCCATCCAACCCTCCAGCTTGATAATGTATCAAACCCTCTTTTACTTACTTATTGTTAACTCCTTGTGTTCAACCTCGATACCCTCACTTCATGATAAGACAGCAATTCAGTTTAAAATACGGTTCTCCGATTGCTTCAATAAACCTTGGTTCAACATATTGGACTTTTCATCAATTGTCAGAAACAACCCTCCCGCTCCCAATTTATGATAAAATGGTTTCATTTCAAGGTCATGTATTCAAATTGCTTCAATTCAAGAAGCAAAACTGTCATAATTATAGTACCAAGCTGTAATCTAACATCATAAAAAACGTCATGCTTCTTCATCTCTTCCTCAAAAGTTAGATCCACATAATGAACTTAATTTACACTATTTTCTTGGACCTTCAATTTCTTTTTTACCTCTTGGTTTTTGTGAGCAAAAGTTGCAAATGGTGGTAGTTCTGTATCAGGGATTTCCGAAATTTGCTTATCTTCATTGATATCTATGATAATGTGAATTATTGTAATTGATCATACTTCATTTAACAATAGAGGGGGGGCTACGAAGAGATAAGAGAGATAAGGCGAAAGACAGGGGAAAAGTAACAGATAAAGAGAGAGACAGGATGAGATGGAGAGAAAGAAAGAGAATGGGAGGAGGAAAAAGATAGTCGGGTTAGAGAGACAGCGTGATGAATAGAGAGAGTCAAAGAGGGAAGTACAATGGAGACAGAGAAGCCCCTTGGATAGATAGAGACAAATAGATACAGATAGGACGATATAGGGCTGACGGGTAGAGATAGTGCAAGTCTGCAAGCTGTAAGTTGCTTCACCTTTCCTCTCTTCGGCTTAAGTGCACACTACTTCTAAGTTTGGCCTACAAATATTTTAGAGTATGGATTTTCCTTTGCCTATCGAAATGATATTCATACATTGACCTCTTTTCTGTCAAACGCGTGGTGTTGCATTTTTCAGGATTGGTGGTGAAGTGCACAATTCTTCAACTATTTCCTTCTCTGTCTTGTTAAGCCCTTCTCTTTGGCTCTCTGTAAGAGCTGAAATCCTGTCTTGTCCTGTGACAACTGGACAATAGCCAGACCCCAAATTTACTGAATTGGTTTCTGTTATTCATATGATCAGTCCAAAATGTGAAACTTCGCTATTTAAAATGTATATTTTTTCACCTTTATTTTGTTTTTATTCTTTTGAAGTACTATATACTTTGAGGGAAATAGGTGAGGAAAAAAGGGGCTCACGTAATCTAATTTGACCAAGTTTGCTTGGTCGAAGTGCTTAATTTATAACCAGTCAGTTGTCAGTTTGGGGTAAAGGATCACTATATCGTATTGTATGTGAGAGGCGGTTGGATTGGATATAAAGATGAACTAAAAATTGTAGTGCCGCTTACATCATCTTTTAAGTTCGTAACATATTTATGTTTTCTAGTGCTGCTATGTCTAAATTGCCCCATATGTTAATATCAGGACTGCCAGCAGAGACATCCATAGAGAGATTCGTCACCATTGGTGCATATAGTCTGTTGCGGTCATGCACCATTGAGCCGGAGTGCATTATTGGACAGCATTCCATTCTCATGGAAGGTTCCCTGGTGGAGACACACTCAATTCTTGAAGCTGGGTCTGTAGTTCCCCCAGGAAGGAGAATTCCCAGTGGTGAACTTTGGGCAGGAAACCCAGCAAGGTTTGTCAGGACGTTGACCCACGAGGAGACCTTGGAAATTCCTAAACTTGCTGTTGCAATTAATGACCTGAGCAAGGAACATTTCTCAGAGTTTCTTCCTTACTCCACAGTATATTTGGAGGTCGAGAAATTCAAGAAGTCGTTGGGTATAACCATATGATGCAATATGCCTTCTCTCATCTTTGCATTTTGTTTGTTGAGGAAAATAAATATCTCCGAATCATATACCAGCTTTCAGGTTCCTTAATTTCATGCTGATTTTGCTTGCATCGACTTAGGATCAAGTGGGTTTTATTAGAGTTTATGATTGATGCTTATGTTAACACTCGGACTCCTTATGGATAATTAAAATCCACCGATGATTTGAAATCTCCCGTTGTATGTTTTATGAGTACTATTTATATGTTTGTTCCCAATGACCATCTGGGTTTTACATCTGCCATTTCCCTGATATTATAGAAACTTGGTTAAGAGTTTATGTTTCAAGGAATGTCTGATGACCTTTCCTTTCCATCCTTCCATCGTCTGCTTATATTAGTTTTATGCATCAACTCTATTCTGCGATGTCTTGGTTTGATGGCCTAACATGGGG TACGGCCCATTTATGTTTAAAGCCCATATGATTACCCATCTTTGGCCCATTGAACAACAAAGCCAGGTGATCGTATCGCCCTCTCCGACTTGCCATCAGCTGAATCACAGACCACGCTCGCTTCTGCTCTAGAAATGGCAGCTCTATCTCGCTTTTCCAGGAAGGCAATAGCCTCGGCGGTTGCGACTAATCAACTCCGCCGCGCTTTCTCGACGGAAGTGTCGAAAACGATTGCGCCCTCACCGGATCGAGTCAAGTGGGACTATAGAGGTCAAAGAAAGATAATCCCGCTTGGCCAGTGGCTCCCCAAAATTGCCGTCGACGCCTATGTTGCGCCTAATGTTGTCCTCGCCGGACAGGTCAACGTCTGCGACGGGGCCTCCGTTTGGGCGGGTTCCGTTCTCCGCGGCGATCTCAACAAGATCACCGTCGGGTTTTGCTCTAATGTACAGGAACGGTGCGTCCTTCATGCTGCTTGGTCCTCTCCAACAGGACTGCCAGCAGAGACATCCATAGAGAGATTCGTCACCATTGGTGCATATAGTCTGTTGCGGTCATGCACCATTGAGCCGGAGTGCATTATTGGACAGCATTCCATTCTCATGGAAGGTTCCCTGGTGGAGACACACTCAATTCTTGAAGCTGGGTCTGTAGTTCCCCCAGGAAGGAGAATTCCCAGTGGTGAACTTTGGGCAGGAAACCCAGCAAGGTTTGTCAGGACGTTGACCCACGAGGAGACCTTGGAAATTCCTAAACTTGCTGTTGCAATTAATGACCTGAGCAAGGAACATTTCTCAGAGTTTCTTCCTTACTCCACAGTATATTTGGAGGTCGAGAAATTCAAGAAGTCGTTGGGTATAACCATATGATGCAATATGCCTTCTCTCATCTTTGCATTTTGTTTGTTGAGGAAAATAAATATCTCCGAATCATATACCAGCTTTCAGGTTCCTTAATTTCATGCTGATTTTGCTTGCATCGACTTAGGATCAAGTGGGTTTTATTAGAGTTTATGATTGATGCTTATGTTAACACTCGGACTCCTTATGGATAATTAAAATCCACCGATGATTTGAAATCTCCCGTTGTATGTTTTATGAGTACTATTTATATGTTTGTTCCCAATGACCATCTGGGTTTTACATCTGCCATTTCCCTGATATTATAGAAACTTGGTTAAGAGTTTATGTTTCAAGGAATGTCTGATGACCTTTCCTTTCCATCCTTCCATCGTCTGCTTATATTAGTTTTATGCATCAACTCTATTCTGCGATGTCTTGGTTTGATGGCCTAACATGGGG ATGGCAGCTCTATCTCGCTTTTCCAGGAAGGCAATAGCCTCGGCGGTTGCGACTAATCAACTCCGCCGCGCTTTCTCGACGGAAGTGTCGAAAACGATTGCGCCCTCACCGGATCGAGTCAAGTGGGACTATAGAGGTCAAAGAAAGATAATCCCGCTTGGCCAGTGGCTCCCCAAAATTGCCGTCGACGCCTATGTTGCGCCTAATGTTGTCCTCGCCGGACAGGTCAACGTCTGCGACGGGGCCTCCGTTTGGGCGGGTTCCGTTCTCCGCGGCGATCTCAACAAGATCACCGTCGGGTTTTGCTCTAATGTACAGGAACGGTGCGTCCTTCATGCTGCTTGGTCCTCTCCAACAGGACTGCCAGCAGAGACATCCATAGAGAGATTCGTCACCATTGGTGCATATAGTCTGTTGCGGTCATGCACCATTGAGCCGGAGTGCATTATTGGACAGCATTCCATTCTCATGGAAGGTTCCCTGGTGGAGACACACTCAATTCTTGAAGCTGGGTCTGTAGTTCCCCCAGGAAGGAGAATTCCCAGTGGTGAACTTTGGGCAGGAAACCCAGCAAGGTTTGTCAGGACGTTGACCCACGAGGAGACCTTGGAAATTCCTAAACTTGCTGTTGCAATTAATGACCTGAGCAAGGAACATTTCTCAGAGTTTCTTCCTTACTCCACAGTATATTTGGAGGTCGAGAAATTCAAGAAGTCGTTGGGTATAACCATATGA MAALSRFSRKAIASAVATNQLRRAFSTEVSKTIAPSPDRVKWDYRGQRKIIPLGQWLPKIAVDAYVAPNVVLAGQVNVCDGASVWAGSVLRGDLNKITVGFCSNVQERCVLHAAWSSPTGLPAETSIERFVTIGAYSLLRSCTIEPECIIGQHSILMEGSLVETHSILEAGSVVPPGRRIPSGELWAGNPARFVRTLTHEETLEIPKLAVAINDLSKEHFSEFLPYSTVYLEVEKFKKSLGITI Homology
BLAST of Cp4.1LG04g16320 vs. ExPASy Swiss-Prot
Match: Q9SMN1 (Gamma carbonic anhydrase-like 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACAL2 PE=1 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 1.2e-111 Identity = 198/253 (78.26%), Postives = 223/253 (88.14%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. ExPASy Swiss-Prot
Match: Q9FMV1 (Gamma carbonic anhydrase-like 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACAL1 PE=1 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 7.0e-109 Identity = 198/253 (78.26%), Postives = 221/253 (87.35%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. ExPASy Swiss-Prot
Match: Q94AU7 (Gamma carbonic anhydrase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA3 PE=1 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.1e-32 Identity = 73/183 (39.89%), Postives = 115/183 (62.84%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. ExPASy Swiss-Prot
Match: Q9FWR5 (Gamma carbonic anhydrase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA1 PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.1e-32 Identity = 74/183 (40.44%), Postives = 115/183 (62.84%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. ExPASy Swiss-Prot
Match: Q9C6B3 (Gamma carbonic anhydrase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA2 PE=1 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.2e-31 Identity = 66/165 (40.00%), Postives = 106/165 (64.24%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. NCBI nr
Match: XP_023531879.1 (gamma carbonic anhydrase-like 2, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 484 bits (1247), Expect = 1.54e-172 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. NCBI nr
Match: KAG7021390.1 (Gamma carbonic anhydrase-like 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 481 bits (1239), Expect = 2.56e-171 Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. NCBI nr
Match: KAG6587404.1 (Gamma carbonic anhydrase-like 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 481 bits (1238), Expect = 3.64e-171 Identity = 241/244 (98.77%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. NCBI nr
Match: XP_022933267.1 (gamma carbonic anhydrase-like 2, mitochondrial [Cucurbita moschata]) HSP 1 Score: 481 bits (1238), Expect = 3.64e-171 Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. NCBI nr
Match: XP_022921423.1 (gamma carbonic anhydrase-like 2, mitochondrial [Cucurbita moschata] >XP_022987134.1 gamma carbonic anhydrase-like 2, mitochondrial [Cucurbita maxima] >KAG7023056.1 Gamma carbonic anhydrase-like 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 479 bits (1233), Expect = 2.10e-170 Identity = 239/244 (97.95%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. ExPASy TrEMBL
Match: A0A6J1EZA5 (gamma carbonic anhydrase-like 2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111440330 PE=4 SV=1) HSP 1 Score: 481 bits (1238), Expect = 1.76e-171 Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. ExPASy TrEMBL
Match: A0A6J1JI10 (gamma carbonic anhydrase-like 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484776 PE=4 SV=1) HSP 1 Score: 479 bits (1233), Expect = 1.02e-170 Identity = 239/244 (97.95%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. ExPASy TrEMBL
Match: A0A6J1L3J3 (gamma carbonic anhydrase-like 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111500207 PE=4 SV=1) HSP 1 Score: 479 bits (1233), Expect = 1.02e-170 Identity = 241/244 (98.77%), Postives = 242/244 (99.18%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. ExPASy TrEMBL
Match: A0A6J1E3V9 (gamma carbonic anhydrase-like 2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111429706 PE=4 SV=1) HSP 1 Score: 479 bits (1233), Expect = 1.02e-170 Identity = 239/244 (97.95%), Postives = 243/244 (99.59%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. ExPASy TrEMBL
Match: A0A6J1BZX1 (gamma carbonic anhydrase-like 2, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007013 PE=4 SV=1) HSP 1 Score: 474 bits (1221), Expect = 6.88e-169 Identity = 238/244 (97.54%), Postives = 241/244 (98.77%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. TAIR 10
Match: AT3G48680.1 (gamma carbonic anhydrase-like 2 ) HSP 1 Score: 404.1 bits (1037), Expect = 8.2e-113 Identity = 198/253 (78.26%), Postives = 223/253 (88.14%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. TAIR 10
Match: AT5G63510.1 (gamma carbonic anhydrase like 1 ) HSP 1 Score: 394.8 bits (1013), Expect = 5.0e-110 Identity = 198/253 (78.26%), Postives = 221/253 (87.35%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. TAIR 10
Match: AT5G63510.2 (gamma carbonic anhydrase like 1 ) HSP 1 Score: 377.1 bits (967), Expect = 1.1e-104 Identity = 197/280 (70.36%), Postives = 220/280 (78.57%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. TAIR 10
Match: AT5G66510.1 (gamma carbonic anhydrase 3 ) HSP 1 Score: 141.7 bits (356), Expect = 7.6e-34 Identity = 73/183 (39.89%), Postives = 115/183 (62.84%), Query Frame = 0
BLAST of Cp4.1LG04g16320 vs. TAIR 10
Match: AT1G19580.1 (gamma carbonic anhydrase 1 ) HSP 1 Score: 140.2 bits (352), Expect = 2.2e-33 Identity = 74/183 (40.44%), Postives = 115/183 (62.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|