Cp4.1LG04g15940 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g15940
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Elongator complex protein 3
Location	Cp4.1LG04: 12427368 .. 12430923 (+)
RNA-Seq Expression	Cp4.1LG04g15940
Synteny	Cp4.1LG04g15940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTGCAGTGGTGGCGGAATCGGCTCGGAAACTACCTCGGCCTGGTCGGGGGGGATTCGAAGGTCATGGGTTTTCCGAGGAGGAAGGCCGAGTTCGTGCCATTGCTGAGATTGTTAATTCCATGGTCGACCTTTCACGAAAAGGGCAAAACGTCGATCTGAACGCTCTGAAATCCGCTGCCTGCCGGAAATATGGCCTTGCCCGGGCCCCAAAGCTTGTCGAGATGATTGCGGCGCTTCCTGAGTCGGACCGCGAGGCACTGCTGCCGAAGCTTCGGGCCAAGCCGGTTCGAACAGCCTCCGGTATCGCAGTCGTGGCGGTTATGTCTAAACCGCATCGGTGCCCTCATATTGCTACGACGGGGAATATTTGTGTATACTGCCCCGGAGGACCTGATTCGGACTTTGAGTACAGTACTCAATCTTACACTGGTTATGAGCCCACAAGCATGCGTGCAATTCGTGCAAGGTTGGTTGTAACTTGTAACTTCTGAGATTTTGTATTACCTTCTTCTTCTTCAAGTCTCGAACTTTTTGCTTCACGAGTATTTGTTTCATCTTTATTATTATGTTATTGGATGCCTTACACATCTATATCGAGGAAAGAGCGTGTTTAGAGCACAGTATTTTGGCTAAGAAAGTATTAAATTTCTAAATTCATGTATAAAATATTTTTAGCCCAGAGTAAACCGAGGTGGGGTTCGTTGAAAATACTATGGGAATGAAGAAAATGAATGCGAGTAACTGGCAGCTGCTTGTCGTGGGAAATTAAGTATAAGAATCATGTTTTCCTTGGCAGTCTGTTTGCTTCACTAGATATATGAACATCTTTAGGGTGTACTACAATCATTGTTGCTTTTGCTTGTCAGTTCTTAATGATATTTTGTTGCTCTGCATACGTTCTGAGATAATTTTCATCTTACCTGCCACCGCTTTGATTGTAGATACAATCCATATGTCCAGGCTAGAAGTCGGATAGATCAATTGAAGCGTTTGGGCCATAGTGTTGATAAGGTTCCTTTTTCTTCTCTCTAATTTTTTTTTTTTTTCTAGCATAGAAAATTATCATAAAATTGTCTGTTTACTTTCAGGTTGAGTTCATCTTAATGGGTGGGACTTTCATGTCACTGCCAGCTGATTATCGTGATTACTTTATAAGGAATCTTCATGATGCTTTGTCAGGGCATACTTCTGCCAATGTTGAAGAGGCAGTTGCCTACTCTGAGCACAGTGCAGTTAAATGTATTGGCATGACAATAGAAACGTGAGTTTTTCCCCCAAACTTTCAAGTTTTGAGCTTTACATTTCCTTGTCTCTGTATTATACCAGTTCAAACTGTTTCAGACTTTTATCTTTGTGAATTCTTCATTGGATACGTTATTACTGCAATCAAGATCACGTACGACAACTCCTTGCCGTGGCCTATTATAAGCTCCTGAGACTGTGTTTTTGTTTAATTAATGAAAAAAGATTTCATTGCTTTTTTTTTTTTTCTTTTTTGCTTAACCAGGAGGCCTGATTATTGTCTTGGACCTCACTTGAGGCAAATGCTTTCTTATGGTTGTACACGCCTGGAGATTGGAGTTCAAAGTACATATGAGGATGTAGCTCGAGACACTAACAGAGGGCATACTGTAGCTGCTGTGGCTGATTGCTTTTGCTTGGCAAAGGATGCTGGTTTCAAGGTTTGTATTAGCAAATTTGCAAAGAATAAAGCTAACTCATTGATGAACCATTTGCAAGGCAACCTTAGATCTGTGGCCAGTTAAGGATTTAAATTTATTGTTCATGTGACTTGATCTTCTCTTAGTAGGTTTTCTCCCCATTTGGCGTTCCTTGAAGTTTGGGTAGCATCATCATCATGTTGCATTGTTAACAATGCATCTTTTTACATTTTTCTAAAGTTTGAAATTAACTTTTTGCTTTTCTTGTAGGTTGTAGCACACATGATGCCTGATCTTCCTAATGTTGGGGTTGAGAGAGACCTGGAAAGTTTTCGGGAGTTCTTTGAGAACCCTTCATTTAGAGCAGATGGGCTCAAAATATATCCCACGCTTGTGATCCGTGGAACTGGGCTCTATGAACTGTGGAAAACTGGCAGGCAAGTAGCTATTTGTACAATCTCACTATGGAACATATTATCTTCTCAAACTTGAAAAGAGATGTTCGAATCATGACCCTGGTTTTATAAATTAAATGCTCATGTTCCCAATTGAAATATTTTTGTGTGAAAATAGTAATGGTGTTAACTATTGCAGATCATCATAAATGTTCATTCATATGCAGGTATAGAAACTATCCACCAGAGCAACTTGTTGATATTGTGGCAAGAATCCTAGCTCTGGTACCTCCCTGGACTCGAGTATATAGAGTACAACGGGATATCCCAATGCCTTTGGTTACTTCTGGTGTAGAGAAAGGAAATCTTCGAGAGCTAGCTCTTGCTCGAATGGATGATTTGGGCTTGAAATGCCGTGATGTTCGGACACGAGAAGCTGGAATTCAGGTTAATTAACAAATGGAGCTTTATGTTCTTTAGTCACACTTCTTATATTCCCAATTTAAACCTAGTACTCTGCCTTAGTGAAGGATGTTAAAAGCCTTCCCATTTTGTGACTTCAGGACATTCATCACAAGATTAAACCTGAAGAAGTTGAGCTTGTCCGTCGTGATTATATGGCAAATGAAGGCTGGGAAACGTTTCTATCATATGAAGATGTTCGGCAGGTATCTTATCCCCATACCCCATGTCCTCAGTTTTTTCATGCAATTACAAATTCAAGGCTAATGCTGTGTTACAACTGTGATGCATGGCCATAGCTTGCATTTTGTAGGCTCGTATTACTAGAACTTGAATTTTTATGCAGGACATTCTTGTTGGTCTGCTCCGGCTGAGAAGATGTGGTCGCAACACCACTTGTCCTGAGCTGGTTGGGAAGTGTTCCATTGTTCGTGAACTCCATGTGTATGGAACTGCCGTTCCAGTTCATGGACGTGATACCGAGAAGCTACAGCACCAGGTAATACAGCCCCTCTTTTCTACAAGCTGCATTAAAGAGGAAAGAAAATCCTTTTCTATGCAAAAGAATTAAGAGTATTACTGGATCTTCACAGGGTTATGGCACGCTTTTGATGGAGGAGGCAGAGCGGATAGCTCGTATGGAGCATCGATCAACAAAGATTGCTGTTATATCAGGCGTTGGAACCCGTCATTATTATAGAAAATTAGGTTACGAACTAGAGGGACCTTACATGGTGAAAAGCCTGGACTGATGAGATTGAGTAGATTTTGTTATGATGGTATCACTTAAATGTTATGTTGTAAGCTTCTTTTCCTTTTATTGCCCTCAAAGTTGATCCCTTCATTATTGGTAATTGATTATTTTTCATACTTTTATACTTGGTTTGAAATATATCTCATCGTCCCTTGGTTATGTATAATAGATAAATTTCTTCCTAGTGTTTCATTATTTCTTTCAAAACTCGCTCTATTTGTTGATGTAATAAGTAATCCAATATTTTACCCAAATGAGAAAATTTCAACTTTTTTAA

mRNA sequence

ATGGCGACTGCAGTGGTGGCGGAATCGGCTCGGAAACTACCTCGGCCTGGTCGGGGGGGATTCGAAGGTCATGGGTTTTCCGAGGAGGAAGGCCGAGTTCGTGCCATTGCTGAGATTGTTAATTCCATGGTCGACCTTTCACGAAAAGGGCAAAACTCTGTTTGCTTCACTAGATATATGAACATCTTTAGGGTGTACTACAATCATTGTTGCTTTTGCTTATACAATCCATATGTCCAGGCTAGAAGTCGGATAGATCAATTGAAGCGTTTGGGCCATAGTGTTGATAAGGTTGAGTTCATCTTAATGGGTGGGACTTTCATGTCACTGCCAGCTGATTATCGTGATTACTTTATAAGGAATCTTCATGATGCTTTGTCAGGGCATACTTCTGCCAATGTTGAAGAGGCAGTTGCCTACTCTGAGCACAGTGCAGTTAAATGTATTGGCATGACAATAGAAACGAGGCCTGATTATTGTCTTGGACCTCACTTGAGGCAAATGCTTTCTTATGGTTGTACACGCCTGGAGATTGGAGTTCAAAGTACATATGAGGATGTAGCTCGAGACACTAACAGAGGGCATACTGTAGCTGCTGTGGCTGATTGCTTTTGCTTGGCAAAGGATGCTGGTTTCAAGGACATTCATCACAAGATTAAACCTGAAGAAGTTGAGCTTGTCCGTCGTGATTATATGGCAAATGAAGGCTGGGAAACGTTTCTATCATATGAAGATGTTCGGCAGGACATTCTTGTTGGTCTGCTCCGGCTGAGAAGATGTGGTCGCAACACCACTTGTCCTGAGCTGGTTGGGAAGTGTTCCATTGTTCGTGAACTCCATGTGTATGGAACTGCCGTTCCAGTTCATGGACGTGATACCGAGAAGCTACAGCACCAGGGTTATGGCACGCTTTTGATGGAGGAGGCAGAGCGGATAGCTCGTATGGAGCATCGATCAACAAAGATTGCTGTTATATCAGGCGTTGGAACCCGTCATTATTATAGAAAATTAGGTTACGAACTAGAGGGACCTTACATGGTGAAAAGCCTGGACTGATGAGATTGAGTAGATTTTGTTATGATGGTATCACTTAAATGTTATGTTGTAAGCTTCTTTTCCTTTTATTGCCCTCAAAGTTGATCCCTTCATTATTGGTAATTGATTATTTTTCATACTTTTATACTTGGTTTGAAATATATCTCATCGTCCCTTGGTTATGTATAATAGATAAATTTCTTCCTAGTGTTTCATTATTTCTTTCAAAACTCGCTCTATTTGTTGATGTAATAAGTAATCCAATATTTTACCCAAATGAGAAAATTTCAACTTTTTTAA

Coding sequence (CDS)

ATGGCGACTGCAGTGGTGGCGGAATCGGCTCGGAAACTACCTCGGCCTGGTCGGGGGGGATTCGAAGGTCATGGGTTTTCCGAGGAGGAAGGCCGAGTTCGTGCCATTGCTGAGATTGTTAATTCCATGGTCGACCTTTCACGAAAAGGGCAAAACTCTGTTTGCTTCACTAGATATATGAACATCTTTAGGGTGTACTACAATCATTGTTGCTTTTGCTTATACAATCCATATGTCCAGGCTAGAAGTCGGATAGATCAATTGAAGCGTTTGGGCCATAGTGTTGATAAGGTTGAGTTCATCTTAATGGGTGGGACTTTCATGTCACTGCCAGCTGATTATCGTGATTACTTTATAAGGAATCTTCATGATGCTTTGTCAGGGCATACTTCTGCCAATGTTGAAGAGGCAGTTGCCTACTCTGAGCACAGTGCAGTTAAATGTATTGGCATGACAATAGAAACGAGGCCTGATTATTGTCTTGGACCTCACTTGAGGCAAATGCTTTCTTATGGTTGTACACGCCTGGAGATTGGAGTTCAAAGTACATATGAGGATGTAGCTCGAGACACTAACAGAGGGCATACTGTAGCTGCTGTGGCTGATTGCTTTTGCTTGGCAAAGGATGCTGGTTTCAAGGACATTCATCACAAGATTAAACCTGAAGAAGTTGAGCTTGTCCGTCGTGATTATATGGCAAATGAAGGCTGGGAAACGTTTCTATCATATGAAGATGTTCGGCAGGACATTCTTGTTGGTCTGCTCCGGCTGAGAAGATGTGGTCGCAACACCACTTGTCCTGAGCTGGTTGGGAAGTGTTCCATTGTTCGTGAACTCCATGTGTATGGAACTGCCGTTCCAGTTCATGGACGTGATACCGAGAAGCTACAGCACCAGGGTTATGGCACGCTTTTGATGGAGGAGGCAGAGCGGATAGCTCGTATGGAGCATCGATCAACAAAGATTGCTGTTATATCAGGCGTTGGAACCCGTCATTATTATAGAAAATTAGGTTACGAACTAGAGGGACCTTACATGGTGAAAAGCCTGGACTGA

Protein sequence

MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNSVCFTRYMNIFRVYYNHCCFCLYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLLRLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARMEHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLD

Homology

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BLAST of Cp4.1LG04g15940 vs. ExPASy Swiss-Prot
Match: Q93ZR1 (Elongator complex protein 3 OS=Arabidopsis thaliana OX=3702 GN=HAG3 PE=1 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 1.3e-143
Identity = 292/564 (51.77%), Postives = 314/564 (55.67%), Query Frame = 0


Query: 1   MATAVVAE-SARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN------S 60
           MATAVV     +K PRPG+GG++G G +EEE RVRAI+EIV++M++ S + +N       
Sbjct: 1   MATAVVMNGELKKQPRPGKGGYQGRGLTEEEARVRAISEIVSTMIERSHRNENVDLNAIK 60

Query: 61  VCFTRYMNIFR------------------------------------------------- 120
               R   + R                                                 
Sbjct: 61  TAACRKYGLARAPKLVEMIAALPDSERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHI 120

Query: 121 -VYYNHCCFC----------------------------LYNPYVQARSRIDQLKRLGHSV 180
               N C +C                             YNPYVQARSRIDQLKRLGHSV
Sbjct: 121 ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV 180

Query: 181 DKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIET 240
           DKVEFILMGGTFMSLPA+YRD+FIRNLHDALSGHTSANVEEAVAYSEHSA KCIGMTIET
Sbjct: 181 DKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIET 240

Query: 241 RPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK-- 300
           RPDYCLGPHLRQML YGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK  
Sbjct: 241 RPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV 300

Query: 301 ------------------------------------------------------------ 351
                                                                       
Sbjct: 301 AHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP 360

[Close]

BLAST of Cp4.1LG04g15940 vs. ExPASy Swiss-Prot
Match: Q7X7L3 (Elongator complex protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ELP3 PE=2 SV=2)

HSP 1 Score: 505.8 bits (1301), Expect = 4.1e-142
Identity = 299/572 (52.27%), Postives = 317/572 (55.42%), Query Frame = 0


Query: 1   MATAVVA--------ESARKLPRPGRGGFE-GHGFSEEEGRVRAIAEIVNSMVDLSRKGQ 60
           MATAV A        +  R+ P PGRGG     G SEEE RVRAIAEIV++M +LSR+G+
Sbjct: 1   MATAVAAAGGGGGGEQPRRRKPAPGRGGVVLPAGLSEEEARVRAIAEIVSAMGELSRRGE 60

Query: 61  N-------SVCFTRY-------------------------------------MNIFRVYY 120
           +       S    RY                                     + +  V  
Sbjct: 61  DVDLNALKSAACRRYGLARAPKLVEMIAAVPEADRAALLPRLRAKPVRTASGIAVVAVMS 120

Query: 121 ------------NHCCFC----------------------------LYNPYVQARSRIDQ 180
                       N C +C                             YNPYVQARSRIDQ
Sbjct: 121 KPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQ 180

Query: 181 LKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVK 240
           LKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAV YSEH AVK
Sbjct: 181 LKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHGAVK 240

Query: 241 CIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLA 300
           CIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLA
Sbjct: 241 CIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLA 300

Query: 301 KDAGFK------------------------------------------------------ 351
           KDAGFK                                                      
Sbjct: 301 KDAGFKVVAHMMPDLPNVGVERDLESFREFFENPAFRADGLKIYPTLVIRGTGLYELWKT 360

[Close]

BLAST of Cp4.1LG04g15940 vs. ExPASy Swiss-Prot
Match: Q5ZHS1 (Elongator complex protein 3 OS=Gallus gallus OX=9031 GN=ELP3 PE=2 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.1e-107
Identity = 211/405 (52.10%), Postives = 235/405 (58.02%), Query Frame = 0


Query: 75  YNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANV 134
           Y+PY+Q R R++QLK+LGHSVDKVEFI+MGGTFM+LP DYRDYFIRNLHDALSGHTS NV
Sbjct: 141 YDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALPEDYRDYFIRNLHDALSGHTSNNV 200

Query: 135 EEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRG 194
            EAV YSE S  KC+G+TIETRPDYCL  HL  MLSYGCTRLEIGVQS YEDVARDTNRG
Sbjct: 201 AEAVKYSERSLTKCVGITIETRPDYCLKRHLSDMLSYGCTRLEIGVQSVYEDVARDTNRG 260

Query: 195 HTVAAVADCFCLAKDAGFK----------------------------------------- 254
           HTV AV + F LAKDAGFK                                         
Sbjct: 261 HTVKAVCESFHLAKDAGFKVVAHMMPDLPNMGLERDTDQFVEFFENPAFRPDGMKLYPTL 320

Query: 255 ------------------------------------------------------------ 314
                                                                       
Sbjct: 321 VIRGTGLYELWKTGRYKSYPPSTLVDLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHG 380

Query: 315 ----------------------------DIHHKIKPEEVELVRRDYMANEGWETFLSYED 351
                                       +IHHK++P ++EL+RRDY+AN GWETFLSYED
Sbjct: 381 NLRELALARMKDLGTQCRDVRTREVGIQEIHHKVRPYQIELIRRDYVANGGWETFLSYED 440

[Close]

BLAST of Cp4.1LG04g15940 vs. ExPASy Swiss-Prot
Match: Q9VQZ6 (Elongator complex protein 3 OS=Drosophila melanogaster OX=7227 GN=Elp3 PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.9e-107
Identity = 207/406 (50.99%), Postives = 240/406 (59.11%), Query Frame = 0


Query: 75  YNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANV 134
           Y+P++Q R R++QLK+LGHSVDKVEFI+MGGTFM LP +YRDYFIRNLHDALSGH+SANV
Sbjct: 144 YDPFLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMCLPEEYRDYFIRNLHDALSGHSSANV 203

Query: 135 EEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRG 194
            EAV YSE S  KCIG+TIETRPDYCL  H+  MLSYGCTRLEIGVQS YEDVARDTNRG
Sbjct: 204 AEAVRYSEKSRTKCIGITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRG 263

Query: 195 HTVAAVADCFCLAKDAGFK----------------------------------------- 254
           HTV AV + F L KDAG+K                                         
Sbjct: 264 HTVRAVCESFQLGKDAGYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTL 323

Query: 255 ------------------------------------------------------------ 314
                                                                       
Sbjct: 324 VIRGTGLYELWKTGRYKSYPPSMLVDLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHG 383

Query: 315 ----------------------------DIHHKIKPEEVELVRRDYMANEGWETFLSYED 352
                                       +IH+K++P E+EL+RRDY+AN GWETFLSYED
Sbjct: 384 NLRELALARMKDLGTTCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYED 443

[Close]

BLAST of Cp4.1LG04g15940 vs. ExPASy Swiss-Prot
Match: Q1ZXC6 (Elongator complex protein 3 OS=Dictyostelium discoideum OX=44689 GN=elp3 PE=3 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 3.2e-107
Identity = 207/405 (51.11%), Postives = 238/405 (58.77%), Query Frame = 0


Query: 75  YNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANV 134
           YNP++Q R RIDQLKRLGH+V+KVEFI+MGGTFMSLP+DYRDYFIRNLHDALSGHTS NV
Sbjct: 154 YNPFLQTRHRIDQLKRLGHNVEKVEFIIMGGTFMSLPSDYRDYFIRNLHDALSGHTSNNV 213

Query: 135 EEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRG 194
            EAV YSE S VKC+G+TIETRPD+CL  HL  ML+YGCTRLEIGVQS +ED+ARDTNRG
Sbjct: 214 AEAVKYSEQSNVKCVGITIETRPDHCLKLHLSNMLTYGCTRLEIGVQSVFEDIARDTNRG 273

Query: 195 HTVAAVADCFCLAKDAGFK----------------------------------------- 254
           HTV AV + F LAKD+GFK                                         
Sbjct: 274 HTVRAVLESFQLAKDSGFKVVAHMMPDLPNMGMERDIYGFMEFFENPAFRADGLKIYPTL 333

Query: 255 ------------------------------------------------------------ 314
                                                                       
Sbjct: 334 VIRGTGLYELWKTGTYKNYSPDSLVDLIAKVLALVPPWTRIYRIQRDIPMPLVTSGVEYG 393

Query: 315 ----------------------------DIHHKIKPEEVELVRRDYMANEGWETFLSYED 351
                                       ++HHKIKP++VEL+RRDY+AN GWETFLS+ED
Sbjct: 394 NLRELCLARMKDFGTKCRDVRTREVGIQEVHHKIKPDQVELIRRDYVANGGWETFLSFED 453

[Close]

BLAST of Cp4.1LG04g15940 vs. NCBI nr
Match: XP_022933694.1 (elongator complex protein 3 [Cucurbita moschata] >XP_023002338.1 elongator complex protein 3 [Cucurbita maxima] >XP_023531702.1 elongator complex protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 579 bits (1493), Expect = 3.77e-203
Identity = 335/564 (59.40%), Postives = 339/564 (60.11%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN-------S 60
           MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN       S
Sbjct: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  VCFTRY-------------------------------------MNIFRVYY--------- 120
               +Y                                     + +  V           
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 ---NHCCFC----------------------------LYNPYVQARSRIDQLKRLGHSVD 180
              N C +C                             YNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK--- 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK   
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 ------------------------------------------------------------ 351
                                                                       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE 360

[Close]

BLAST of Cp4.1LG04g15940 vs. NCBI nr
Match: KAG6587428.1 (Elongator complex protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 576 bits (1485), Expect = 6.18e-202
Identity = 333/564 (59.04%), Postives = 338/564 (59.93%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN-------S 60
           MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN       S
Sbjct: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  VCFTRY-------------------------------------MNIFRVYY--------- 120
               +Y                                     + +  V           
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 ---NHCCFC----------------------------LYNPYVQARSRIDQLKRLGHSVD 180
              N C +C                             YNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK--- 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK   
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 ------------------------------------------------------------ 351
                                                                       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE 360

[Close]

BLAST of Cp4.1LG04g15940 vs. NCBI nr
Match: KAG7021412.1 (Elongator complex protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 572 bits (1473), Expect = 6.20e-200
Identity = 333/576 (57.81%), Postives = 338/576 (58.68%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN-------S 60
           MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN       S
Sbjct: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  VCFTRY-------------------------------------MNIFRVYY--------- 120
               +Y                                     + +  V           
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 ---NHCCFC----------------------------LYNPYVQARSRIDQLKRLGHSVD 180
              N C +C                             YNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK--- 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK   
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 ------------------------------------------------------------ 351
                                                                       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRQVAICTI 360

[Close]

BLAST of Cp4.1LG04g15940 vs. NCBI nr
Match: XP_038880764.1 (elongator complex protein 3 [Benincasa hispida])

HSP 1 Score: 568 bits (1465), Expect = 6.73e-199
Identity = 328/564 (58.16%), Postives = 336/564 (59.57%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN-------S 60
           MATA+VAES RKLPRPGRGGFEGHGFSEEE RVRAIAEIVNSMVDLSRKGQN       S
Sbjct: 1   MATAMVAESNRKLPRPGRGGFEGHGFSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  VCFTRY-------------------------------------MNIFRVYY--------- 120
               +Y                                     + +  V           
Sbjct: 61  AACRKYGLSRAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 ---NHCCFC----------------------------LYNPYVQARSRIDQLKRLGHSVD 180
              N C +C                             YNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTS+NVEEAVAYSEH AVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSSNVEEAVAYSEHGAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK--- 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK   
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 ------------------------------------------------------------ 351
                                                                       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE 360

[Close]

BLAST of Cp4.1LG04g15940 vs. NCBI nr
Match: XP_022134894.1 (elongator complex protein 3 [Momordica charantia])

HSP 1 Score: 568 bits (1465), Expect = 6.73e-199
Identity = 330/564 (58.51%), Postives = 335/564 (59.40%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN-------S 60
           MATAVVAES RKLPRPGRGGFE HGFSEEE RVRAIAEIVNSMVDLSRKGQN       S
Sbjct: 1   MATAVVAESNRKLPRPGRGGFEAHGFSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  VCFTRY-------------------------------------MNIFRVYY--------- 120
               +Y                                     + +  V           
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 ---NHCCFC----------------------------LYNPYVQARSRIDQLKRLGHSVD 180
              N C +C                             YNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK--- 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK   
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 ------------------------------------------------------------ 351
                                                                       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE 360

[Close]

BLAST of Cp4.1LG04g15940 vs. ExPASy TrEMBL
Match: A0A6J1KT98 (Elongator complex protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111496204 PE=3 SV=1)

HSP 1 Score: 579 bits (1493), Expect = 1.82e-203
Identity = 335/564 (59.40%), Postives = 339/564 (60.11%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN-------S 60
           MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN       S
Sbjct: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  VCFTRY-------------------------------------MNIFRVYY--------- 120
               +Y                                     + +  V           
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 ---NHCCFC----------------------------LYNPYVQARSRIDQLKRLGHSVD 180
              N C +C                             YNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK--- 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK   
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 ------------------------------------------------------------ 351
                                                                       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE 360

[Close]

BLAST of Cp4.1LG04g15940 vs. ExPASy TrEMBL
Match: A0A6J1F0G5 (Elongator complex protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111441030 PE=3 SV=1)

HSP 1 Score: 579 bits (1493), Expect = 1.82e-203
Identity = 335/564 (59.40%), Postives = 339/564 (60.11%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN-------S 60
           MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN       S
Sbjct: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  VCFTRY-------------------------------------MNIFRVYY--------- 120
               +Y                                     + +  V           
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 ---NHCCFC----------------------------LYNPYVQARSRIDQLKRLGHSVD 180
              N C +C                             YNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK--- 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK   
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 ------------------------------------------------------------ 351
                                                                       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE 360

[Close]

BLAST of Cp4.1LG04g15940 vs. ExPASy TrEMBL
Match: A0A6J1C012 (Elongator complex protein 3 OS=Momordica charantia OX=3673 GN=LOC111007041 PE=3 SV=1)

HSP 1 Score: 568 bits (1465), Expect = 3.26e-199
Identity = 330/564 (58.51%), Postives = 335/564 (59.40%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN-------S 60
           MATAVVAES RKLPRPGRGGFE HGFSEEE RVRAIAEIVNSMVDLSRKGQN       S
Sbjct: 1   MATAVVAESNRKLPRPGRGGFEAHGFSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  VCFTRY-------------------------------------MNIFRVYY--------- 120
               +Y                                     + +  V           
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 ---NHCCFC----------------------------LYNPYVQARSRIDQLKRLGHSVD 180
              N C +C                             YNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK--- 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK   
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 ------------------------------------------------------------ 351
                                                                       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE 360

[Close]

BLAST of Cp4.1LG04g15940 vs. ExPASy TrEMBL
Match: A0A0A0LP05 (Elongator complex protein 3 OS=Cucumis sativus OX=3659 GN=Csa_1G002770 PE=3 SV=1)

HSP 1 Score: 560 bits (1443), Expect = 7.14e-196
Identity = 324/564 (57.45%), Postives = 333/564 (59.04%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN-------S 60
           MATA+VAE  RKLPRPGRGGFEGHGFSEEE RVRAIAEIVNSMVDLSRKGQN       S
Sbjct: 1   MATAMVAEPNRKLPRPGRGGFEGHGFSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  VCFTRY-------------------------------------MNIFRVYY--------- 120
               +Y                                     + +  V           
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDRETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 ---NHCCFC----------------------------LYNPYVQARSRIDQLKRLGHSVD 180
              N C +C                             YNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEH AVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK--- 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK   
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 ------------------------------------------------------------ 351
                                                                       
Sbjct: 301 HMMPDLPNVGVERDMESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE 360

[Close]

BLAST of Cp4.1LG04g15940 vs. ExPASy TrEMBL
Match: A0A5D3BHH9 (Elongator complex protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00810 PE=3 SV=1)

HSP 1 Score: 559 bits (1441), Expect = 1.44e-195
Identity = 325/564 (57.62%), Postives = 332/564 (58.87%), Query Frame = 0


Query: 1   MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN-------S 60
           MATA+VAE  RKLPRPGRGGFEGHGFSEEE RVRAIAEIVNSMVDLSRKGQN       S
Sbjct: 1   MATAMVAEPNRKLPRPGRGGFEGHGFSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKS 60

Query: 61  VCFTRY-------------------------------------MNIFRVYY--------- 120
               +Y                                     + +  V           
Sbjct: 61  AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA 120

Query: 121 ---NHCCFC----------------------------LYNPYVQARSRIDQLKRLGHSVD 180
              N C +C                             YNPYVQARSRIDQLKRLGHSVD
Sbjct: 121 TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD 180

Query: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR 240
           KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEH AVKCIGMTIETR
Sbjct: 181 KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGAVKCIGMTIETR 240

Query: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK--- 300
           PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK   
Sbjct: 241 PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA 300

Query: 301 ------------------------------------------------------------ 351
                                                                       
Sbjct: 301 HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE 360

[Close]

BLAST of Cp4.1LG04g15940 vs. TAIR 10
Match: AT5G50320.1 (radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein )

HSP 1 Score: 510.8 bits (1314), Expect = 9.0e-145
Identity = 292/564 (51.77%), Postives = 314/564 (55.67%), Query Frame = 0


Query: 1   MATAVVAE-SARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQN------S 60
           MATAVV     +K PRPG+GG++G G +EEE RVRAI+EIV++M++ S + +N       
Sbjct: 1   MATAVVMNGELKKQPRPGKGGYQGRGLTEEEARVRAISEIVSTMIERSHRNENVDLNAIK 60

Query: 61  VCFTRYMNIFR------------------------------------------------- 120
               R   + R                                                 
Sbjct: 61  TAACRKYGLARAPKLVEMIAALPDSERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHI 120

Query: 121 -VYYNHCCFC----------------------------LYNPYVQARSRIDQLKRLGHSV 180
               N C +C                             YNPYVQARSRIDQLKRLGHSV
Sbjct: 121 ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV 180

Query: 181 DKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIET 240
           DKVEFILMGGTFMSLPA+YRD+FIRNLHDALSGHTSANVEEAVAYSEHSA KCIGMTIET
Sbjct: 181 DKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIET 240

Query: 241 RPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK-- 300
           RPDYCLGPHLRQML YGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFK  
Sbjct: 241 RPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV 300

Query: 301 ------------------------------------------------------------ 351
                                                                       
Sbjct: 301 AHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP 360

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g15940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZR1	1.3e-143	51.77	Elongator complex protein 3 OS=Arabidopsis thaliana OX=3702 GN=HAG3 PE=1 SV=1	[more]
Q7X7L3	4.1e-142	52.27	Elongator complex protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ELP3 PE=...	[more]
Q5ZHS1	1.1e-107	52.10	Elongator complex protein 3 OS=Gallus gallus OX=9031 GN=ELP3 PE=2 SV=1	[more]
Q9VQZ6	1.9e-107	50.99	Elongator complex protein 3 OS=Drosophila melanogaster OX=7227 GN=Elp3 PE=2 SV=1	[more]
Q1ZXC6	3.2e-107	51.11	Elongator complex protein 3 OS=Dictyostelium discoideum OX=44689 GN=elp3 PE=3 SV...	[more]

BLAST of Cp4.1LG04g15940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933694.1	3.77e-203	59.40	elongator complex protein 3 [Cucurbita moschata] >XP_023002338.1 elongator compl...	[more]
KAG6587428.1	6.18e-202	59.04	Elongator complex protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7021412.1	6.20e-200	57.81	Elongator complex protein 3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038880764.1	6.73e-199	58.16	elongator complex protein 3 [Benincasa hispida]	[more]
XP_022134894.1	6.73e-199	58.51	elongator complex protein 3 [Momordica charantia]	[more]

BLAST of Cp4.1LG04g15940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KT98	1.82e-203	59.40	Elongator complex protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111496204 PE=3 SV=...	[more]
A0A6J1F0G5	1.82e-203	59.40	Elongator complex protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111441030 PE=3 S...	[more]
A0A6J1C012	3.26e-199	58.51	Elongator complex protein 3 OS=Momordica charantia OX=3673 GN=LOC111007041 PE=3 ...	[more]
A0A0A0LP05	7.14e-196	57.45	Elongator complex protein 3 OS=Cucumis sativus OX=3659 GN=Csa_1G002770 PE=3 SV=1	[more]
A0A5D3BHH9	1.44e-195	57.62	Elongator complex protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of Cp4.1LG04g15940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50320.1	9.0e-145	51.77	radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006638	Elp3/MiaB/NifB	SMART	SM00729	MiaB	coord: 63..315 e-value: 1.6E-7 score: 41.0
None	No IPR available	GENE3D	3.40.630.30		coord: 199..351 e-value: 8.8E-9 score: 37.7
None	No IPR available	PIRSR	PIRSR000167-2	PIRSR000167-2	coord: 147..215 e-value: 1.0E-6 score: 26.1
None	No IPR available	PIRSR	PIRSR005669-1	PIRSR005669-1	coord: 74..213 e-value: 1.9E-81 score: 271.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	SUPERFAMILY	102114	Radical SAM enzymes	coord: 68..215
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 78..216 e-value: 8.9E-14 score: 52.2
IPR000182	GNAT domain	PFAM	PF00583	Acetyltransf_1	coord: 219..339 e-value: 2.7E-8 score: 34.0
IPR000182	GNAT domain	PROSITE	PS51186	GNAT	coord: 198..351 score: 10.760221
IPR034687	Elongator complex protein 3-like	PANTHER	PTHR11135:SF7	ELONGATOR COMPLEX PROTEIN 3	coord: 2..53
IPR034687	Elongator complex protein 3-like	PANTHER	PTHR11135:SF7	ELONGATOR COMPLEX PROTEIN 3	coord: 74..213
IPR034687	Elongator complex protein 3-like	PANTHER	PTHR11135:SF7	ELONGATOR COMPLEX PROTEIN 3	coord: 211..350
IPR039661	ELP3/YhcC	PANTHER	PTHR11135	HISTONE ACETYLTRANSFERASE-RELATED	coord: 74..213
IPR039661	ELP3/YhcC	PANTHER	PTHR11135	HISTONE ACETYLTRANSFERASE-RELATED	coord: 2..53
IPR039661	ELP3/YhcC	PANTHER	PTHR11135	HISTONE ACETYLTRANSFERASE-RELATED	coord: 211..350
IPR016181	Acyl-CoA N-acyltransferase	SUPERFAMILY	55729	Acyl-CoA N-acyltransferases (Nat)	coord: 229..346

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g15940.1	Cp4.1LG04g15940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008033	tRNA processing
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008080	N-acetyltransferase activity
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0051536	iron-sulfur cluster binding