Cp4.1LG04g15740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g15740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor MYB61-like isoform X1
Location	Cp4.1LG04: 12332957 .. 12334333 (+)
RNA-Seq Expression	Cp4.1LG04g15740
Synteny	Cp4.1LG04g15740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGACTTAGAACCCACTGCCACTCTCCCTCTGTACACCTCCAAATTCCTCTGTTTTTCCTTTTGCTTTTTTCGCTTTCTGATGGGACGCAATTCTTGTTGCTTGAAGTCTAAACTCCGCAAAGGCCTCTGGTCGCCCGAGGAAGATGAAAAGCTCTTCAATTACATTGCCACTTTCGGCGTCGGCTGCTGGAGCTCTGTCCCTAAGCTCGCTGGTACGTCCTGCTTTCATCTCCTCAGAACAGACCAAAACTTGAACCCTTTAAAGCTTTTCTCTCTAATTTGGGTTTGTTCGTATTTTGAGAAGTAATATAAAACTCCTTGCTTTGGGTTTCTTTGGTTCTTCCATTTCTGGGTTTTGATCGGTTTTTCTTACTGTTTGATTGATTTTTTGCAGGGTTGGAAAGGTGTGGGAAGAGTTGTAGGCTGAGATGGATAAACTATTTGAGGCCTGATTTGAAGAGAGGGATGTTTTCACAGCAAGAGGAGGATCTCATTATCAGTCTCCATGAAGTTTTAGGCAACAGGTGCATAAGAATTTCGAATCACGCACCAAAATGGATCTTTCCGCCTCTGTTTTTTGAACCTTTTTATGTGGGATTTTTGCAGGTGGGCTCAGATTGCAGCTCAATTACCAGGAAGAACAGACAATGAGATTAAGAACTTTTGGAATTCATGTCTGAAAAAGAAGCTGATGAAGCAAGGAATCGACCCGGCAACCCACAAGCCATTGGAGGAGAATATGGAAGGCATGCAAGATCAGAAGCCAAGAATGGGAGCAGCGCCTCATCATCTTCATGGGAATATCTCCAACCTCACCATTTCTTCAAATGATTCAAATCATCACTACAAACAAATAGAAGACTCATCGCACCACTTTGTAAACAAGATTGAATTCGACTCTCTCAGCTCATACTTTGGTGCTCCAATTCAACACCAGTCCAGCATCAGATCATGTGACCAAAACTTTTTGTACTCAAGTTCAAGTTTTGGGATGCCAAGTTATTCGAGTTCTGAACATGGGAACACGTCAAGAACAGATTTTTCAGAGAATTCAGCATCTGGGTTGAGCTCATTCTTCATGAATGAAGTGAAAGAGAGCTCAAGCAATAGCTCGGTGGTGAGCAACTATTCAGGGTTCCATGGGAAGCTGAACAATGGGGGATATTCATGGGAAGCTGAGAACAAACTGGAGAGTTTGTTTCAGTTTCAGACAAATGAAGTGAAAAACATGGAATTGATGAAGGGAAGTTCTTCAAGGGAAGAAACAAAGATGATTCAAACTCAAAATAACTCGTCAAATTTTGGAAGCTATCCCTTAATGTCAATGTCAGAAAACGCAGGAGGAGGGAGCTTTGGAGTGTTCCATCAGATATGA

mRNA sequence

CCTGACTTAGAACCCACTGCCACTCTCCCTCTGTACACCTCCAAATTCCTCTGTTTTTCCTTTTGCTTTTTTCGCTTTCTGATGGGACGCAATTCTTGTTGCTTGAAGTCTAAACTCCGCAAAGGCCTCTGGTCGCCCGAGGAAGATGAAAAGCTCTTCAATTACATTGCCACTTTCGGCGTCGGCTGCTGGAGCTCTGTCCCTAAGCTCGCTGAAGACTCATCGCACCACTTTGTAAACAAGATTGAATTCGACTCTCTCAGCTCATACTTTGGTGCTCCAATTCAACACCAGTCCAGCATCAGATCATGTGACCAAAACTTTTTGTACTCAAGTTCAAGTTTTGGGATGCCAAGTTATTCGAGTTCTGAACATGGGAACACGTCAAGAACAGATTTTTCAGAGAATTCAGCATCTGGGTTGAGCTCATTCTTCATGAATGAAGTGAAAGAGAGCTCAAGCAATAGCTCGGTGGTGAGCAACTATTCAGGGTTCCATGGGAAGCTGAACAATGGGGGATATTCATGGGAAGCTGAGAACAAACTGGAGAGTTTGTTTCAGTTTCAGACAAATGAAGTGAAAAACATGGAATTGATGAAGGGAAGTTCTTCAAGGGAAGAAACAAAGATGATTCAAACTCAAAATAACTCGTCAAATTTTGGAAGCTATCCCTTAATGTCAATGTCAGAAAACGCAGGAGGAGGGAGCTTTGGAGTGTTCCATCAGATATGA

Coding sequence (CDS)

ATGGGACGCAATTCTTGTTGCTTGAAGTCTAAACTCCGCAAAGGCCTCTGGTCGCCCGAGGAAGATGAAAAGCTCTTCAATTACATTGCCACTTTCGGCGTCGGCTGCTGGAGCTCTGTCCCTAAGCTCGCTGAAGACTCATCGCACCACTTTGTAAACAAGATTGAATTCGACTCTCTCAGCTCATACTTTGGTGCTCCAATTCAACACCAGTCCAGCATCAGATCATGTGACCAAAACTTTTTGTACTCAAGTTCAAGTTTTGGGATGCCAAGTTATTCGAGTTCTGAACATGGGAACACGTCAAGAACAGATTTTTCAGAGAATTCAGCATCTGGGTTGAGCTCATTCTTCATGAATGAAGTGAAAGAGAGCTCAAGCAATAGCTCGGTGGTGAGCAACTATTCAGGGTTCCATGGGAAGCTGAACAATGGGGGATATTCATGGGAAGCTGAGAACAAACTGGAGAGTTTGTTTCAGTTTCAGACAAATGAAGTGAAAAACATGGAATTGATGAAGGGAAGTTCTTCAAGGGAAGAAACAAAGATGATTCAAACTCAAAATAACTCGTCAAATTTTGGAAGCTATCCCTTAATGTCAATGTCAGAAAACGCAGGAGGAGGGAGCTTTGGAGTGTTCCATCAGATATGA

Protein sequence

MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLAEDSSHHFVNKIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNTSRTDFSENSASGLSSFFMNEVKESSSNSSVVSNYSGFHGKLNNGGYSWEAENKLESLFQFQTNEVKNMELMKGSSSREETKMIQTQNNSSNFGSYPLMSMSENAGGGSFGVFHQI

Homology

[Close]

BLAST of Cp4.1LG04g15740 vs. ExPASy Swiss-Prot
Match: Q8LPH6 (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.8e-15
Identity = 36/44 (81.82%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 1  MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA 45
          MGR+SCC K KLRKGLWSPEEDEKL NYI   G GCWSSVPKLA
Sbjct: 1  MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLA 44

[Close]

BLAST of Cp4.1LG04g15740 vs. ExPASy Swiss-Prot
Match: Q8VZQ2 (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.4e-14
Identity = 34/44 (77.27%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 1  MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA 45
          MGR+SCC K KLRKGLWSPEEDEKL  +I   G GCWSSVPKLA
Sbjct: 1  MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLA 44

[Close]

BLAST of Cp4.1LG04g15740 vs. ExPASy Swiss-Prot
Match: Q9SPG3 (Transcription factor MYB26 OS=Arabidopsis thaliana OX=3702 GN=MYB26 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.8e-14
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 1  MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLAEDSSH 50
          MG +SCC K K+++GLWSPEEDEKL NYI ++G GCWSSVPK A   +H
Sbjct: 1  MGHHSCCNKQKVKRGLWSPEEDEKLINYINSYGHGCWSSVPKHAGTYTH 49

[Close]

BLAST of Cp4.1LG04g15740 vs. ExPASy Swiss-Prot
Match: P20027 (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3)

HSP 1 Score: 66.6 bits (161), Expect = 3.9e-10
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 11 KLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA 45
          K+RKGLWSPEEDEKL+N+I   GVGCWSSVP+LA
Sbjct: 13 KVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLA 46

[Close]

BLAST of Cp4.1LG04g15740 vs. ExPASy Swiss-Prot
Match: P81395 (Myb-related protein 330 OS=Antirrhinum majus OX=4151 GN=MYB330 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.3e-09
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 0


Query: 1  MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA 45
          MGR+ CC K+   KG W+ EED++L NYI   G GCW S+PK A
Sbjct: 1  MGRSPCCEKAHTNKGAWTKEEDQRLINYIRAHGEGCWRSLPKAA 44

[Close]

BLAST of Cp4.1LG04g15740 vs. NCBI nr
Match: XP_023530757.1 (myb-related protein 308-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371 bits (952), Expect = 1.42e-126
Identity = 216/343 (62.97%), Postives = 216/343 (62.97%), Query Frame = 0


Query: 1   MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA---------------- 60
           MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA                
Sbjct: 1   MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQG 120

Query: 121 ---------------------------------------------------EDSSHHFVN 180
                                                              EDSSHHFVN
Sbjct: 121 IDPATHKPLEENMEGMQDQKPRMGAAPHHLHGNISNLTISSNDSNHHYKQIEDSSHHFVN 180

Query: 181 KIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNTSRTDFSENSASG 216
           KIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNTSRTDFSENSASG
Sbjct: 181 KIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNTSRTDFSENSASG 240

[Close]

BLAST of Cp4.1LG04g15740 vs. NCBI nr
Match: KAG6587447.1 (Transcription factor MYB86, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 363 bits (932), Expect = 1.56e-123
Identity = 211/343 (61.52%), Postives = 214/343 (62.39%), Query Frame = 0


Query: 1   MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA---------------- 60
           MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA                
Sbjct: 1   MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQG 120

Query: 121 ---------------------------------------------------EDSSHHFVN 180
                                                              EDSSHHFVN
Sbjct: 121 IDPATHKPLEENMEGMQDQKPRMEAAPHHLHGNISNLTISSNDSNHHYKQIEDSSHHFVN 180

Query: 181 KIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNTSRTDFSENSASG 216
           KIEFDSL SYFGAPIQHQSSIRSCDQN+LYS+SSFGMPSYSSSEHGNTSRTDFSENSASG
Sbjct: 181 KIEFDSLGSYFGAPIQHQSSIRSCDQNYLYSNSSFGMPSYSSSEHGNTSRTDFSENSASG 240

[Close]

BLAST of Cp4.1LG04g15740 vs. NCBI nr
Match: XP_022933373.1 (transcription factor MYB61-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 362 bits (930), Expect = 3.13e-123
Identity = 211/343 (61.52%), Postives = 214/343 (62.39%), Query Frame = 0


Query: 1   MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA---------------- 60
           MGRNSCC KSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA                
Sbjct: 1   MGRNSCCFKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQG 120

Query: 121 ---------------------------------------------------EDSSHHFVN 180
                                                              EDSSHHFVN
Sbjct: 121 IDPATHKPLEENMEGMQDQKPRMEAAPHHLHGNISNLTISSNDSNHHYKQIEDSSHHFVN 180

Query: 181 KIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNTSRTDFSENSASG 216
           KIEFDSLSSYFGA IQHQS+IRSCDQNFLYS+SSFGMPSYSSSEHGNTSRTDFSENSASG
Sbjct: 181 KIEFDSLSSYFGAQIQHQSNIRSCDQNFLYSNSSFGMPSYSSSEHGNTSRTDFSENSASG 240

[Close]

BLAST of Cp4.1LG04g15740 vs. NCBI nr
Match: XP_022973760.1 (transcription repressor MYB5-like [Cucurbita maxima])

HSP 1 Score: 346 bits (888), Expect = 7.56e-117
Identity = 205/343 (59.77%), Postives = 208/343 (60.64%), Query Frame = 0


Query: 1   MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA---------------- 60
           MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA                
Sbjct: 1   MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQG 120

Query: 121 ---------------------------------------------------EDSSHHFVN 180
                                                              E SS HFVN
Sbjct: 121 IDPATHKPLEENMEGMQDQKPRMEAAPHHLHGNISNLTISSNDSNHHYKQTEHSSQHFVN 180

Query: 181 KIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNTSRTDFSENSASG 216
            IEFDSLSSYFGAPIQHQS+IRSCDQN+LY  SSFGMPSYSSSEHGNTSRTDFSENSASG
Sbjct: 181 NIEFDSLSSYFGAPIQHQSNIRSCDQNYLYLDSSFGMPSYSSSEHGNTSRTDFSENSASG 240

[Close]

BLAST of Cp4.1LG04g15740 vs. NCBI nr
Match: XP_023530758.1 (transcription factor MYB61-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330 bits (845), Expect = 2.59e-111
Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 42  KLAEDSSHHFVNKIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNT 101
           K  EDSSHHFVNKIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNT
Sbjct: 101 KQIEDSSHHFVNKIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNT 160

Query: 102 SRTDFSENSASGLSSFFMNEVKESSSNSSVVSNYSGFHGKLNNGGYSWEAENKLESLFQF 161
           SRTDFSENSASGLSSFFMNEVKESSSNSSVVSNYSGFHGKLNNGGYSWEAENKLESLFQF
Sbjct: 161 SRTDFSENSASGLSSFFMNEVKESSSNSSVVSNYSGFHGKLNNGGYSWEAENKLESLFQF 220

Query: 162 QTNEVKNMELMKGSSSREETKMIQTQNNSSNFGSYPLMSMSENAGGGSFGVFHQI 216
           QTNEVKNMELMKGSSSREETKMIQTQNNSSNFGSYPLMSMSENAGGGSFGVFHQI
Sbjct: 221 QTNEVKNMELMKGSSSREETKMIQTQNNSSNFGSYPLMSMSENAGGGSFGVFHQI 275

[Close]

BLAST of Cp4.1LG04g15740 vs. ExPASy TrEMBL
Match: A0A6J1F4K3 (transcription factor MYB61-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440776 PE=4 SV=1)

HSP 1 Score: 362 bits (930), Expect = 1.52e-123
Identity = 211/343 (61.52%), Postives = 214/343 (62.39%), Query Frame = 0


Query: 1   MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA---------------- 60
           MGRNSCC KSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA                
Sbjct: 1   MGRNSCCFKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQG 120

Query: 121 ---------------------------------------------------EDSSHHFVN 180
                                                              EDSSHHFVN
Sbjct: 121 IDPATHKPLEENMEGMQDQKPRMEAAPHHLHGNISNLTISSNDSNHHYKQIEDSSHHFVN 180

Query: 181 KIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNTSRTDFSENSASG 216
           KIEFDSLSSYFGA IQHQS+IRSCDQNFLYS+SSFGMPSYSSSEHGNTSRTDFSENSASG
Sbjct: 181 KIEFDSLSSYFGAQIQHQSNIRSCDQNFLYSNSSFGMPSYSSSEHGNTSRTDFSENSASG 240

[Close]

BLAST of Cp4.1LG04g15740 vs. ExPASy TrEMBL
Match: A0A6J1IC66 (transcription repressor MYB5-like OS=Cucurbita maxima OX=3661 GN=LOC111472325 PE=4 SV=1)

HSP 1 Score: 346 bits (888), Expect = 3.66e-117
Identity = 205/343 (59.77%), Postives = 208/343 (60.64%), Query Frame = 0


Query: 1   MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA---------------- 60
           MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA                
Sbjct: 1   MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQG 120

Query: 121 ---------------------------------------------------EDSSHHFVN 180
                                                              E SS HFVN
Sbjct: 121 IDPATHKPLEENMEGMQDQKPRMEAAPHHLHGNISNLTISSNDSNHHYKQTEHSSQHFVN 180

Query: 181 KIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNTSRTDFSENSASG 216
            IEFDSLSSYFGAPIQHQS+IRSCDQN+LY  SSFGMPSYSSSEHGNTSRTDFSENSASG
Sbjct: 181 NIEFDSLSSYFGAPIQHQSNIRSCDQNYLYLDSSFGMPSYSSSEHGNTSRTDFSENSASG 240

[Close]

BLAST of Cp4.1LG04g15740 vs. ExPASy TrEMBL
Match: A0A6J1EZL1 (transcription factor MYB61-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440776 PE=4 SV=1)

HSP 1 Score: 323 bits (827), Expect = 6.87e-109
Identity = 169/175 (96.57%), Postives = 172/175 (98.29%), Query Frame = 0


Query: 42  KLAEDSSHHFVNKIEFDSLSSYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNT 101
           K  EDSSHHFVNKIEFDSLSSYFGA IQHQS+IRSCDQNFLYS+SSFGMPSYSSSEHGNT
Sbjct: 101 KQIEDSSHHFVNKIEFDSLSSYFGAQIQHQSNIRSCDQNFLYSNSSFGMPSYSSSEHGNT 160

Query: 102 SRTDFSENSASGLSSFFMNEVKESSSNSSVVSNYSGFHGKLNNGGYSWEAENKLESLFQF 161
           SRTDFSENSASGLSSFFMNEVKESSSNSSVVSNYSGFHGKLNNGG+SWEAENKLESLFQF
Sbjct: 161 SRTDFSENSASGLSSFFMNEVKESSSNSSVVSNYSGFHGKLNNGGFSWEAENKLESLFQF 220

Query: 162 QTNEVKNMELMKGSSSREETKMIQTQNNSSNFGSYPLMSMSENAGGGSFGVFHQI 216
           QTNEVKNMELMKGSSSREETKMIQTQNNSSNFGSYPLMSMSENAGGGSFGVFHQI
Sbjct: 221 QTNEVKNMELMKGSSSREETKMIQTQNNSSNFGSYPLMSMSENAGGGSFGVFHQI 275

[Close]

BLAST of Cp4.1LG04g15740 vs. ExPASy TrEMBL
Match: A0A6J1BZ59 (protein ODORANT1-like OS=Momordica charantia OX=3673 GN=LOC111006818 PE=4 SV=1)

HSP 1 Score: 270 bits (689), Expect = 1.01e-86
Identity = 176/364 (48.35%), Postives = 191/364 (52.47%), Query Frame = 0


Query: 1   MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA---------------- 60
           MGRNSCCLK KLRKGLWSPEEDEKLFNYI TFGVGCWSSVPKLA                
Sbjct: 1   MGRNSCCLKPKLRKGLWSPEEDEKLFNYITTFGVGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRPDLKRGMFSQQEEDLIISLHQVLGNRWAQIAAQLPGRTDNEIKNFWNSSLKKKLMKQG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 IDPATHKPLEENMEAMNDHKKSYTEKQRVKVAHHLQGDISNITISSEASFLTDSNHYYKQ 180

Query: 181 -EDSSHHFVNKIEFDSLS--------SYFGAPIQHQSSIRSCDQNFLYSSSSFGMPSYSS 216
            EDS+ HFVNKIEFDS+S        S F A     ++ RSCD N+ YS+SSFG+PSYSS
Sbjct: 181 TEDSAQHFVNKIEFDSVSYMGGEYNNSQFAATQYQPNTTRSCDHNYFYSNSSFGLPSYSS 240

[Close]

BLAST of Cp4.1LG04g15740 vs. ExPASy TrEMBL
Match: A0A5A7UUJ1 (Transcription factor MYB32-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001130 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 1.92e-79
Identity = 172/365 (47.12%), Postives = 190/365 (52.05%), Query Frame = 0


Query: 1   MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA---------------- 60
           MGRNSCCLK KLRKGLWSPEEDEKLFNYI TFGVGCWSSVPKLA                
Sbjct: 1   MGRNSCCLKPKLRKGLWSPEEDEKLFNYITTFGVGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQG 120

Query: 121 ---------------------------------------------------EDSSHHFVN 180
                                                              E+SS HFVN
Sbjct: 121 IDPATHKPLEENMEAIKDEKKNSTYNNEKPKMEAIHHHHHHHLHGNISKINEESSQHFVN 180

Query: 181 KIEFDSLSSYFG---------APIQHQSSIRSCDQNFLYSSSSFGMPSYSSSEHGNTSRT 216
           KIEFDSLSSY           A  Q+ S+IRS DQNF YS+SS GM SYSS EHGN SRT
Sbjct: 181 KIEFDSLSSYLNGEYNNNSQFASAQYNSNIRSYDQNFFYSNSSIGMGSYSSCEHGNMSRT 240

[Close]

BLAST of Cp4.1LG04g15740 vs. TAIR 10
Match: AT5G26660.1 (myb domain protein 86 )

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-16
Identity = 36/44 (81.82%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 1  MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA 45
          MGR+SCC K KLRKGLWSPEEDEKL NYI   G GCWSSVPKLA
Sbjct: 1  MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLA 44

[Close]

BLAST of Cp4.1LG04g15740 vs. TAIR 10
Match: AT1G57560.1 (myb domain protein 50 )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 35/44 (79.55%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 1  MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA 45
          M R+SCC K KLRKGLWSPEEDEKL NYI   G GCWSSVPKLA
Sbjct: 1  MKRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLA 44

[Close]

BLAST of Cp4.1LG04g15740 vs. TAIR 10
Match: AT4G01680.1 (myb domain protein 55 )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 34/44 (77.27%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 1  MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA 45
          MGR+SCC K KLRKGLWSPEEDEKL  YI  +G GCWSSVPK A
Sbjct: 1  MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQA 44

[Close]

BLAST of Cp4.1LG04g15740 vs. TAIR 10
Match: AT4G01680.2 (myb domain protein 55 )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 34/44 (77.27%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 1  MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA 45
          MGR+SCC K KLRKGLWSPEEDEKL  YI  +G GCWSSVPK A
Sbjct: 1  MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQA 44

[Close]

BLAST of Cp4.1LG04g15740 vs. TAIR 10
Match: AT4G01680.3 (myb domain protein 55 )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 34/44 (77.27%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 1  MGRNSCCLKSKLRKGLWSPEEDEKLFNYIATFGVGCWSSVPKLA 45
          MGR+SCC K KLRKGLWSPEEDEKL  YI  +G GCWSSVPK A
Sbjct: 1  MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQA 44

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g15740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPH6	1.8e-15	81.82	Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1	[more]
Q8VZQ2	3.4e-14	77.27	Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1	[more]
Q9SPG3	9.8e-14	65.31	Transcription factor MYB26 OS=Arabidopsis thaliana OX=3702 GN=MYB26 PE=2 SV=1	[more]
P20027	3.9e-10	79.41	Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3	[more]
P81395	7.3e-09	54.55	Myb-related protein 330 OS=Antirrhinum majus OX=4151 GN=MYB330 PE=2 SV=1	[more]

BLAST of Cp4.1LG04g15740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530757.1	1.42e-126	62.97	myb-related protein 308-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6587447.1	1.56e-123	61.52	Transcription factor MYB86, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022933373.1	3.13e-123	61.52	transcription factor MYB61-like isoform X1 [Cucurbita moschata]	[more]
XP_022973760.1	7.56e-117	59.77	transcription repressor MYB5-like [Cucurbita maxima]	[more]
XP_023530758.1	2.59e-111	98.86	transcription factor MYB61-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG04g15740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4K3	1.52e-123	61.52	transcription factor MYB61-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1IC66	3.66e-117	59.77	transcription repressor MYB5-like OS=Cucurbita maxima OX=3661 GN=LOC111472325 PE...	[more]
A0A6J1EZL1	6.87e-109	96.57	transcription factor MYB61-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1BZ59	1.01e-86	48.35	protein ODORANT1-like OS=Momordica charantia OX=3673 GN=LOC111006818 PE=4 SV=1	[more]
A0A5A7UUJ1	1.92e-79	47.12	Transcription factor MYB32-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Cp4.1LG04g15740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26660.1	1.3e-16	81.82	myb domain protein 86	[more]
AT1G57560.1	1.4e-15	79.55	myb domain protein 50	[more]
AT4G01680.1	1.4e-15	77.27	myb domain protein 55	[more]
AT4G01680.2	1.4e-15	77.27	myb domain protein 55	[more]
AT4G01680.3	1.4e-15	77.27	myb domain protein 55	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 11..79 e-value: 2.0E-8 score: 36.0
None	No IPR available	PANTHER	PTHR47997	MYB DOMAIN PROTEIN 55	coord: 67..207 coord: 1..44
None	No IPR available	PANTHER	PTHR47997:SF10	MYB TRANSCRIPTION FACTOR	coord: 1..44
None	No IPR available	PANTHER	PTHR47997:SF10	MYB TRANSCRIPTION FACTOR	coord: 67..207
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..43 e-value: 1.2E-5 score: 25.4
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..43 score: 11.381173
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..42 score: 6.585638
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 17..42 e-value: 4.11021E-6 score: 40.6366
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 8..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g15740.1	Cp4.1LG04g15740.1	mRNA