Cp4.1LG04g15020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g15020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Vacuolar protein sorting-associated protein 29
Location	Cp4.1LG04: 11899792 .. 11902527 (+)
RNA-Seq Expression	Cp4.1LG04g15020
Synteny	Cp4.1LG04g15020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTCCCCAAAATTCCTAATTTTGACCCCTCCGTAGCTCTCTCCGATACTGATTCAAGCTTTTCCTTCACAATTCCTACTTCCTGAAATTTCACGGCGTTCAAAGCTCGACAGGGAGGCATTTTAATGCCGGCTTCCGCCAATTAATCAAACCCCTCTGGTATTATTGATCGTGAAGTTCTTTTGATTCAGATGCAGAAATTATAACTTTTTACATTCAATTCTGTTCTATTTCATGCCCAATTCCTCAGATGATCAGCTTCTGGGTATGTCTTGCTTAGCTGATTTCTTTTTTTTTGACAGAATTGTAAAGTGGGTTTGGAGTGAGAATGGTGTTGGTGTTGGCTTTGGGGGATTTGCATATACCACATAGAGCCCCTGACCTGCCGGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATTCAGCACATAATCTGCACCGGCAACCTTTGTATCAAAGTATGTTCAAATCTTCTTATTCAATTTTCATCTTTCCATGGAAATCCTCAATCCTCAATCCTCAATCTGTCCTATCCTAGTCTTGATTTTCCCTTACATCATTAATCTTACTGATGATTTTAATTCCTTTTGGGTCTGATTTCATCATGATCTTTTCCTTAGAAAGTGTCCTGGATAGTTTCATGTGCATTATTTTTTCTTCTTTTGATACAGTATTCATTTGTTTTTTATTTGCTGCTGACTATATCATATTTAAGCTTATTCCAAGGATCCATCATCCGAGTAAGTAAAGAGGTCATGCTGGTAACATTCTTTTGTTCCGTTAAATTGCATAAGATGTGGAGAAACTTCCCAGGGACAATGCAGTATTCTGTTGTGATGATTGTAACATCACCAATTGGGTAGTAGTTCAGTGGATTTTCCCCCATATATTGAAATGCTTAGATAATCAACATATAAGTTCATCCCATTCTTAACTTGAACCAAATTTTGTCCATTATGTGTACTGGACCTTTGGGTTATTTTAGTTTAAACCAAACTTTTACAACTTGTAATGATGATCTTTGTTCAACATTCCTTGTGGCTTAACTCTAAATGTGAAGCTTTATGACTGAAGATCTTAGATTTAAGGAAAAGGAAAACTGTGGATTCGAAATCCTTTTCTGGGAAACTTGTTTGCATTAAATATCTCATGATTTAATAGAAAACATCAAGTTCATGTTGTTGGAATGAGCATTAACTTCTATTTGGATCTCTCTGTTCATCATATATGGGTTGGAACTTTTGGGGCTTTGATCAATATGTTTATCACCAACTTGCATGTAATTTGTTTAATTGATCGTACAAGAAATGGAGCTGTGTTGTTGAATTGGTTTATATCTCCTTGGGAGAAAAATTGATGTGATGGTTAAAGTTTATTATTGACATTTCCAGGAAGTTCACGACTACTTGAAAACTATTTGTCCTGATTTGCACATTACACGGGGCGAATATGATGAAGAAATGCGTTATCCAGAGACAAAAACTCTGACTATTGGACAATTTAAATTGGGACTGTGCCATGGGCATCAGGTACTGTCTACCATTATAAACTTCAAGAGCCTGAATATTGGAGCTTTTGATTCATTGTCTCTTGTAACCATGAACAGCAAGTTATATTTCTTCAATATTTGCTACCAGAAGTCACCACAAGAAAATAAGTGGTGTTATCATGTAGAAATTTGGCATTTATTTGTTGGTGGCTGGCTTTTGTTTGTAGGTTATTCCATGGGGAGACTTAGACTCGCTTGCCATGATGCAGAGGCAGCTAGACGTAGACATCCTTGTCACTGGTCATACCCATCAATTTACAGCTTACAAACATGAGGGAGGTGTCGTGATTAACCCCGGATCTGCAACAGGTGCGTATAGCAGCATCACCTATGACGTCAACCCGAGCTTTGTCCTCATGGACATCGATGGCCTTCGTGTTGTGGTCTACGTTTACGAACTCATCGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAGACAACCACAACGGGTCATTGAGCAGAACAAATTGCCTTTACATAAACATCCCAAGTTGTTTTCTTTTATGGAGTTGTGATGCATGTTTCTGGAGAAATGTTAGTAATGGCCCGATGGATGTTCTTGTTTTTTTTTTTTTCTTCTTTTTTGTTTAAAGAAAATGTAAGCGTAAGCGAATCGACCATCAACATTTGAGATGAAAATTAGTATATTACCGTTGTGTTTGTTTCAATGAAAGGTTCCCAACTCAACTCTTGGATCTAAGATGAGAAAAGGATTCATGAAGAAAACTAAACTGATACTTTATTAGCTCCATGCCATCTAACCAACATGTTTCTACAGACAATCTTAATTTACAAAATGTATCCAACAGGCAAAGAAATAATACTGTCATATGAACTATACATATAAATTCTCAAAAGAACTGATACACATTCAAACATATAGATAACAAGACAAACATGTCCGTGGAATGAAAGAGAGACAAGCATCATGAAAGAACATTGAACGACTGTGCTCCTCGTGCAACCTTAATAAAGACATCCTCTAATGTTGTGTCAGCCAGACCCCAAGCAAAGACGGCGAACCTACTCTTTGCATTTTCAACTGCTTGAAACACGTCAGCGATTCGGACTTCGTGTTTCGGCAGTTCAAATTTCTGAGTTCCAGAAATGTGGTAGATCTTACTAGCACCGGGAGACAGATGCTTTACCATATCCTCGACATCGACGTCGTGATTCGC

mRNA sequence

CACTCCCCAAAATTCCTAATTTTGACCCCTCCGTAGCTCTCTCCGATACTGATTCAAGCTTTTCCTTCACAATTCCTACTTCCTGAAATTTCACGGCGTTCAAAGCTCGACAGGGAGGCATTTTAATGCCGGCTTCCGCCAATTAATCAAACCCCTCTGAATTGTAAAGTGGGTTTGGAGTGAGAATGGTGTTGGTGTTGGCTTTGGGGGATTTGCATATACCACATAGAGCCCCTGACCTGCCGGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATTCAGCACATAATCTGCACCGGCAACCTTTGTATCAAAGAAGTTCACGACTACTTGAAAACTATTTGTCCTGATTTGCACATTACACGGGGCGAATATGATGAAGAAATGCGTTATCCAGAGACAAAAACTCTGACTATTGGACAATTTAAATTGGGACTGTGCCATGGGCATCAGGTTATTCCATGGGGAGACTTAGACTCGCTTGCCATGATGCAGAGGCAGCTAGACGTAGACATCCTTGTCACTGGTCATACCCATCAATTTACAGCTTACAAACATGAGGGAGGTGTCGTGATTAACCCCGGATCTGCAACAGGTGCGTATAGCAGCATCACCTATGACGTCAACCCGAGCTTTGTCCTCATGGACATCGATGGCCTTCGTGTTGTGGTCTACGTTTACGAACTCATCGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAGACAACCACAACGGGTCATTGAGCAGAACAAATTGCCTTTACATAAACATCCCAAGTTGTTTTCTTTTATGGAGTTGTGATGCATGTTTCTGGAGAAATGTTAGTAATGGCCCGATGGATGTTCTTGTTTTTTTTTTTTTCTTCTTTTTTGTTTAAAGAAAATGTAAGCGTAAGCGAATCGACCATCAACATTTGAGATGAAAATTAGTATATTACCGTTGTGTTTGTTTCAATGAAAGGTTCCCAACTCAACTCTTGGATCTAAGATGAGAAAAGGATTCATGAAGAAAACTAAACTGATACTTTATTAGCTCCATGCCATCTAACCAACATGTTTCTACAGACAATCTTAATTTACAAAATGTATCCAACAGGCAAAGAAATAATACTGTCATATGAACTATACATATAAATTCTCAAAAGAACTGATACACATTCAAACATATAGATAACAAGACAAACATGTCCGTGGAATGAAAGAGAGACAAGCATCATGAAAGAACATTGAACGACTGTGCTCCTCGTGCAACCTTAATAAAGACATCCTCTAATGTTGTGTCAGCCAGACCCCAAGCAAAGACGGCGAACCTACTCTTTGCATTTTCAACTGCTTGAAACACGTCAGCGATTCGGACTTCGTGTTTCGGCAGTTCAAATTTCTGAGTTCCAGAAATGTGGTAGATCTTACTAGCACCGGGAGACAGATGCTTTACCATATCCTCGACATCGACGTCGTGATTCGC

Coding sequence (CDS)

ATGGTGTTGGTGTTGGCTTTGGGGGATTTGCATATACCACATAGAGCCCCTGACCTGCCGGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATTCAGCACATAATCTGCACCGGCAACCTTTGTATCAAAGAAGTTCACGACTACTTGAAAACTATTTGTCCTGATTTGCACATTACACGGGGCGAATATGATGAAGAAATGCGTTATCCAGAGACAAAAACTCTGACTATTGGACAATTTAAATTGGGACTGTGCCATGGGCATCAGGTTATTCCATGGGGAGACTTAGACTCGCTTGCCATGATGCAGAGGCAGCTAGACGTAGACATCCTTGTCACTGGTCATACCCATCAATTTACAGCTTACAAACATGAGGGAGGTGTCGTGATTAACCCCGGATCTGCAACAGGTGCGTATAGCAGCATCACCTATGACGTCAACCCGAGCTTTGTCCTCATGGACATCGATGGCCTTCGTGTTGTGGTCTACGTTTACGAACTCATCGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAGACAACCACAACGGGTCATTGA

Protein sequence

MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITRGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKTTTTGH

Homology

[Close]

BLAST of Cp4.1LG04g15020 vs. ExPASy Swiss-Prot
Match: Q9STT2 (Vacuolar protein sorting-associated protein 29 OS=Arabidopsis thaliana OX=3702 GN=VPS29 PE=2 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 7.3e-98
Identity = 168/186 (90.32%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLH+PHRA DLP KFKSMLVPGKIQHIICTGNLCIKE+HDYLKTICPDLHI 
Sbjct: 1   MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIV 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGE+DE+ RYPE KTLTIGQFKLGLCHGHQVIPWGDLDSLAM+QRQL VDILVTGHTHQF
Sbjct: 61  RGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSI  DVNPSFVLMDIDG R VVYVYELIDGEVKVDKI+F
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVYVYELIDGEVKVDKIEF 180

Query: 181 KKTTTT 187
           KK  TT
Sbjct: 181 KKPPTT 186

[Close]

BLAST of Cp4.1LG04g15020 vs. ExPASy Swiss-Prot
Match: Q7ZV68 (Vacuolar protein sorting-associated protein 29 OS=Danio rerio OX=7955 GN=vps29 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.3e-70
Identity = 118/182 (64.84%), Postives = 150/182 (82.42%), Query Frame = 0


Query: 2   VLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITR 61
           +LVL LGDLHIPHR   LP KFK +LVPGKIQHI+CTGNLC KE +DYLKT+  D+HI R
Sbjct: 1   MLVLVLGDLHIPHRCNTLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60

Query: 62  GEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFT 121
           G++DE + YPE K +T+GQFK+GL HGHQVIPWGD+ SLA++QRQLDVDIL++GHTH+F 
Sbjct: 61  GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTHKFE 120

Query: 122 AYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
           A+++E    INPGSATGAYS++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++K
Sbjct: 121 AFENENKFYINPGSATGAYSALESNITPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180

Query: 182 KT 184
           K+
Sbjct: 181 KS 182

[Close]

BLAST of Cp4.1LG04g15020 vs. ExPASy Swiss-Prot
Match: Q9QZ88 (Vacuolar protein sorting-associated protein 29 OS=Mus musculus OX=10090 GN=Vps29 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.2e-70
Identity = 117/182 (64.29%), Postives = 149/182 (81.87%), Query Frame = 0


Query: 2   VLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITR 61
           +LVL LGDLHIPHR   LP KFK +LVPGKIQHI+CTGNLC KE +DYLKT+  D+HI R
Sbjct: 1   MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60

Query: 62  GEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFT 121
           G++DE + YPE K +T+GQFK+GL HGHQVIPWGD+ SLA++QRQ DVDIL++GHTH+F 
Sbjct: 61  GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120

Query: 122 AYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
           A++HE    INPGSATGAY+++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++K
Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180

Query: 182 KT 184
           K+
Sbjct: 181 KS 182

[Close]

BLAST of Cp4.1LG04g15020 vs. ExPASy Swiss-Prot
Match: Q5R9Z1 (Vacuolar protein sorting-associated protein 29 OS=Pongo abelii OX=9601 GN=VPS29 PE=2 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.2e-70
Identity = 117/182 (64.29%), Postives = 149/182 (81.87%), Query Frame = 0


Query: 2   VLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITR 61
           +LVL LGDLHIPHR   LP KFK +LVPGKIQHI+CTGNLC KE +DYLKT+  D+HI R
Sbjct: 1   MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60

Query: 62  GEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFT 121
           G++DE + YPE K +T+GQFK+GL HGHQVIPWGD+ SLA++QRQ DVDIL++GHTH+F 
Sbjct: 61  GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120

Query: 122 AYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
           A++HE    INPGSATGAY+++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++K
Sbjct: 121 AFEHENKFYINPGSATGAYNALEANIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180

Query: 182 KT 184
           K+
Sbjct: 181 KS 182

[Close]

BLAST of Cp4.1LG04g15020 vs. ExPASy Swiss-Prot
Match: B2RZ78 (Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2)

HSP 1 Score: 266.5 bits (680), Expect = 2.2e-70
Identity = 117/182 (64.29%), Postives = 149/182 (81.87%), Query Frame = 0


Query: 2   VLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITR 61
           +LVL LGDLHIPHR   LP KFK +LVPGKIQHI+CTGNLC KE +DYLKT+  D+HI R
Sbjct: 1   MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60

Query: 62  GEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFT 121
           G++DE + YPE K +T+GQFK+GL HGHQVIPWGD+ SLA++QRQ DVDIL++GHTH+F 
Sbjct: 61  GDFDESLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120

Query: 122 AYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
           A++HE    INPGSATGAY+++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++K
Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180

Query: 182 KT 184
           K+
Sbjct: 181 KS 182

[Close]

BLAST of Cp4.1LG04g15020 vs. NCBI nr
Match: XP_023529239.1 (vacuolar protein sorting-associated protein 29 [Cucurbita pepo subsp. pepo] >KAG6587529.1 Vacuolar protein sorting-associated protein 29, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021505.1 Vacuolar protein sorting-associated protein 29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394 bits (1012), Expect = 1.42e-138
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF
Sbjct: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180

Query: 181 KKTTTTGH 188
           KKTTTTGH
Sbjct: 181 KKTTTTGH 188

[Close]

BLAST of Cp4.1LG04g15020 vs. NCBI nr
Match: XP_022932429.1 (vacuolar protein sorting-associated protein 29 [Cucurbita moschata])

HSP 1 Score: 392 bits (1007), Expect = 8.21e-138
Identity = 187/188 (99.47%), Postives = 187/188 (99.47%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF
Sbjct: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180

Query: 181 KKTTTTGH 188
           KKTTT GH
Sbjct: 181 KKTTTAGH 188

[Close]

BLAST of Cp4.1LG04g15020 vs. NCBI nr
Match: XP_004138157.1 (vacuolar protein sorting-associated protein 29 [Cucumis sativus] >XP_008453189.1 PREDICTED: vacuolar protein sorting-associated protein 29 [Cucumis melo] >XP_038879970.1 vacuolar protein sorting-associated protein 29 [Benincasa hispida] >KAA0057934.1 vacuolar protein sorting-associated protein 29 [Cucumis melo var. makuwa] >KGN63660.1 hypothetical protein Csa_014380 [Cucumis sativus] >TYJ98621.1 vacuolar protein sorting-associated protein 29 [Cucumis melo var. makuwa])

HSP 1 Score: 389 bits (1000), Expect = 9.60e-137
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGEYDEE RYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF
Sbjct: 61  RGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180

Query: 181 KKTTTTGH 188
           KKTTTT H
Sbjct: 181 KKTTTTAH 188

[Close]

BLAST of Cp4.1LG04g15020 vs. NCBI nr
Match: XP_022135231.1 (vacuolar protein sorting-associated protein 29 [Momordica charantia])

HSP 1 Score: 389 bits (1000), Expect = 9.60e-137
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGEYDEE RYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF
Sbjct: 61  RGEYDEESRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180

Query: 181 KKTTTTGH 188
           KKTTTT H
Sbjct: 181 KKTTTTAH 188

[Close]

BLAST of Cp4.1LG04g15020 vs. NCBI nr
Match: XP_022972999.1 (vacuolar protein sorting-associated protein 29-like [Cucurbita maxima])

HSP 1 Score: 387 bits (994), Expect = 7.89e-136
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGEYDEE RYPETKTLTIGQFKLGL HGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF
Sbjct: 61  RGEYDEETRYPETKTLTIGQFKLGLGHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180

Query: 181 KKTTTTGH 188
           KKTTTTGH
Sbjct: 181 KKTTTTGH 188

[Close]

BLAST of Cp4.1LG04g15020 vs. ExPASy TrEMBL
Match: A0A6J1EWY5 (Vacuolar protein sorting-associated protein 29 OS=Cucurbita moschata OX=3662 GN=LOC111438816 PE=3 SV=1)

HSP 1 Score: 392 bits (1007), Expect = 3.98e-138
Identity = 187/188 (99.47%), Postives = 187/188 (99.47%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF
Sbjct: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180

Query: 181 KKTTTTGH 188
           KKTTT GH
Sbjct: 181 KKTTTAGH 188

[Close]

BLAST of Cp4.1LG04g15020 vs. ExPASy TrEMBL
Match: A0A5D3BIV2 (Vacuolar protein sorting-associated protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002440 PE=3 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 4.65e-137
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGEYDEE RYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF
Sbjct: 61  RGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180

Query: 181 KKTTTTGH 188
           KKTTTT H
Sbjct: 181 KKTTTTAH 188

[Close]

BLAST of Cp4.1LG04g15020 vs. ExPASy TrEMBL
Match: A0A0A0LP31 (Vacuolar protein sorting-associated protein 29 OS=Cucumis sativus OX=3659 GN=Csa_1G009640 PE=3 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 4.65e-137
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGEYDEE RYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF
Sbjct: 61  RGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180

Query: 181 KKTTTTGH 188
           KKTTTT H
Sbjct: 181 KKTTTTAH 188

[Close]

BLAST of Cp4.1LG04g15020 vs. ExPASy TrEMBL
Match: A0A6J1C031 (Vacuolar protein sorting-associated protein 29 OS=Momordica charantia OX=3673 GN=LOC111007245 PE=3 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 4.65e-137
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGEYDEE RYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF
Sbjct: 61  RGEYDEESRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180

Query: 181 KKTTTTGH 188
           KKTTTT H
Sbjct: 181 KKTTTTAH 188

[Close]

BLAST of Cp4.1LG04g15020 vs. ExPASy TrEMBL
Match: A0A1S3BWS4 (Vacuolar protein sorting-associated protein 29 OS=Cucumis melo OX=3656 GN=LOC103493980 PE=3 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 4.65e-137
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT
Sbjct: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGEYDEE RYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF
Sbjct: 61  RGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180

Query: 181 KKTTTTGH 188
           KKTTTT H
Sbjct: 181 KKTTTTAH 188

[Close]

BLAST of Cp4.1LG04g15020 vs. TAIR 10
Match: AT3G47810.2 (Calcineurin-like metallo-phosphoesterase superfamily protein )

HSP 1 Score: 357.8 bits (917), Expect = 5.2e-99
Identity = 168/186 (90.32%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLH+PHRA DLP KFKSMLVPGKIQHIICTGNLCIKE+HDYLKTICPDLHI 
Sbjct: 1   MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIV 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGE+DE+ RYPE KTLTIGQFKLGLCHGHQVIPWGDLDSLAM+QRQL VDILVTGHTHQF
Sbjct: 61  RGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSI  DVNPSFVLMDIDG R VVYVYELIDGEVKVDKI+F
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVYVYELIDGEVKVDKIEF 180

Query: 181 KKTTTT 187
           KK  TT
Sbjct: 181 KKPPTT 186

[Close]

BLAST of Cp4.1LG04g15020 vs. TAIR 10
Match: AT3G47810.1 (Calcineurin-like metallo-phosphoesterase superfamily protein )

HSP 1 Score: 357.8 bits (917), Expect = 5.2e-99
Identity = 168/186 (90.32%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLH+PHRA DLP KFKSMLVPGKIQHIICTGNLCIKE+HDYLKTICPDLHI 
Sbjct: 1   MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIV 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGE+DE+ RYPE KTLTIGQFKLGLCHGHQVIPWGDLDSLAM+QRQL VDILVTGHTHQF
Sbjct: 61  RGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSI  DVNPSFVLMDIDG R VVYVYELIDGEVKVDKI+F
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVYVYELIDGEVKVDKIEF 180

Query: 181 KKTTTT 187
           KK  TT
Sbjct: 181 KKPPTT 186

[Close]

BLAST of Cp4.1LG04g15020 vs. TAIR 10
Match: AT3G47810.3 (Calcineurin-like metallo-phosphoesterase superfamily protein )

HSP 1 Score: 357.8 bits (917), Expect = 5.2e-99
Identity = 168/186 (90.32%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLH+PHRA DLP KFKSMLVPGKIQHIICTGNLCIKE+HDYLKTICPDLHI 
Sbjct: 1   MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIV 60

Query: 61  RGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGE+DE+ RYPE KTLTIGQFKLGLCHGHQVIPWGDLDSLAM+QRQL VDILVTGHTHQF
Sbjct: 61  RGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSI  DVNPSFVLMDIDG R VVYVYELIDGEVKVDKI+F
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVYVYELIDGEVKVDKIEF 180

Query: 181 KKTTTT 187
           KK  TT
Sbjct: 181 KKPPTT 186

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g15020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STT2	7.3e-98	90.32	Vacuolar protein sorting-associated protein 29 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q7ZV68	1.3e-70	64.84	Vacuolar protein sorting-associated protein 29 OS=Danio rerio OX=7955 GN=vps29 P...	[more]
Q9QZ88	2.2e-70	64.29	Vacuolar protein sorting-associated protein 29 OS=Mus musculus OX=10090 GN=Vps29...	[more]
Q5R9Z1	2.2e-70	64.29	Vacuolar protein sorting-associated protein 29 OS=Pongo abelii OX=9601 GN=VPS29 ...	[more]
B2RZ78	2.2e-70	64.29	Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=...	[more]

BLAST of Cp4.1LG04g15020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529239.1	1.42e-138	100.00	vacuolar protein sorting-associated protein 29 [Cucurbita pepo subsp. pepo] >KAG...	[more]
XP_022932429.1	8.21e-138	99.47	vacuolar protein sorting-associated protein 29 [Cucurbita moschata]	[more]
XP_004138157.1	9.60e-137	98.94	vacuolar protein sorting-associated protein 29 [Cucumis sativus] >XP_008453189.1...	[more]
XP_022135231.1	9.60e-137	98.94	vacuolar protein sorting-associated protein 29 [Momordica charantia]	[more]
XP_022972999.1	7.89e-136	98.94	vacuolar protein sorting-associated protein 29-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG04g15020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWY5	3.98e-138	99.47	Vacuolar protein sorting-associated protein 29 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3BIV2	4.65e-137	98.94	Vacuolar protein sorting-associated protein 29 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0LP31	4.65e-137	98.94	Vacuolar protein sorting-associated protein 29 OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1C031	4.65e-137	98.94	Vacuolar protein sorting-associated protein 29 OS=Momordica charantia OX=3673 GN...	[more]
A0A1S3BWS4	4.65e-137	98.94	Vacuolar protein sorting-associated protein 29 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Cp4.1LG04g15020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47810.2	5.2e-99	90.32	Calcineurin-like metallo-phosphoesterase superfamily protein	[more]
AT3G47810.1	5.2e-99	90.32	Calcineurin-like metallo-phosphoesterase superfamily protein	[more]
AT3G47810.3	5.2e-99	90.32	Calcineurin-like metallo-phosphoesterase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029052	Metallo-dependent phosphatase-like	GENE3D	3.60.21.10		coord: 1..182 e-value: 2.4E-80 score: 271.1
IPR029052	Metallo-dependent phosphatase-like	SUPERFAMILY	56300	Metallo-dependent phosphatases	coord: 1..181
IPR024654	Calcineurin-like phosphoesterase domain, lpxH-type	PFAM	PF12850	Metallophos_2	coord: 4..157 e-value: 4.8E-20 score: 72.4
IPR000979	Phosphodiesterase MJ0936/Vps29	TIGRFAM	TIGR00040	TIGR00040	coord: 3..157 e-value: 6.7E-30 score: 102.2
IPR000979	Phosphodiesterase MJ0936/Vps29	PANTHER	PTHR11124	VACUOLAR SORTING PROTEIN VPS29	coord: 1..186
None	No IPR available	PANTHER	PTHR11124:SF25	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 29	coord: 1..186
IPR028661	Vacuolar protein sorting-associated protein 29	CDD	cd07394	MPP_Vps29	coord: 3..180 e-value: 1.20906E-123 score: 344.192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g15020.1	Cp4.1LG04g15020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0042147	retrograde transport, endosome to Golgi
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005768	endosome
cellular_component	GO:0030904	retromer complex