Cp4.1LG04g14880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g14880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	HNH domain-containing protein
Location	Cp4.1LG04: 11846726 .. 11851094 (+)
RNA-Seq Expression	Cp4.1LG04g14880
Synteny	Cp4.1LG04g14880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGACGACACGTCGTTTAACAAGTGAAACGAAACAAGGGCCACTTCTCACTATTACCGCTCAAATTATCCGCCAACGACCGAATGATGAGATGAGGTCGAGCAAAGAATCGAAGAAGAAAACTCGCCCCTCATCACCGCTCAGGGACCGAACCAGTCCTTCAACGAGGTTCGAATCGAGGCGTCATGGGTCTCACTCATCGAGGCTCAGCCCCTCTACTTCCCTTCTGGACCGTGACCTTGTCACCAGCGAAGCCAATCTCCTCGGAGACCTAAAACTCTCTCCCGATCACTCAGTTTCAGACTACAATCCCCGGAGCTTTCCTTACAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGGGACCCAGATCGGTGGCGCCGAGATGCTCTTGGTAACACTGTTTTCCGAAAGCTTGTTGGCTGCCCCGGTTGTCTTTGTCATGACTATGATCATATTTTGCCTTACTCTAAGGTACTTACCCCTTATCGATTCTACTCTTTACTCCAGATGTTTCGTTGGTATTCCTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGGTGTTTCTCGTATTTTGTTGAGTATGGGACTGGATTGTTGTAAAGTGCTTTGTGTTTGCTATCGTAATGTAGGCTGTATGATGGAAACGAGCAAGAACCTTTTATAGTTGCTTATTAGAGACATGGTCATGGTAATTGTTGGGAGGGAGTCCCACACGGATCATCTAAGGGGATGATCGGGTCTATAGGTAAGGAATACATCTCTATTGGTATGAGGTCTTTTGGGAAGACCAAAATAAAGCTATGAGAGCTAATACTCAAAGTGGACAATATCATAGTACTGTGAATATATGCGATTCCTAACATGGTATTAGAGTCTTGCTCTTAGCTTAGCAATGTCAATAGAATCCTCAAATGTCGAACAAAGAAATTGTGAGTCTTGAAGGTGTAGTCAAAAGTGACTCAAGTATCGAACAAAGGGTGTACTTTATTCGAGGGCTCCAGAAAAAGGAGTCGAGCCTCGATTAAGTGGAGGTCTGTTCGAGGGCTACATAGGCCTCAATGGAGGCTCTATAGTATACTTTGTCCTAGAGGAGGATTGTTGAGGATTTTGTTGGGTGGGAGACCCACATGGGCTAATTAAGGGGATGATCATGGGTTATAAGTAAGGAATACATCTCCATTAGTATGAGATTTTTTGGGAAGACCAAAAGCAAAGCCACGAGAGCTAATACTCAAAGTGGATAATATCATCGTGGAGGATCGTGATTCGTAACGGGTCATATTACTTTCAATTCTACTTGATTGTGCTCTTGGTTTTGTTTATTTGACTTGTTGGTGGGTTCTTCTTTCTACATTATGGATTTGGCTGTCATTTTAATGTATTGCGACCTGAAAATATTTCATTTCCATTTCTATTTAGATTATCACATGTACATGATGTATTTACTCAATAGCTTAGAATTACAGTATTGAACTTTTGATGCTATTAAATGGTTGTGGAATTCTGTTATAATCTTCTCTTCTTTCGGACCCAGGAGAGTTATGCACAAAGATTACTTTCATGCTTATTTCTTCCTAAGTTTTCTTGGACTTTTCCGAGCTATAACATAGGAAAATGACCTACTAATTGGTCTAAGTTTATACGAAAGGAAGCTTAGAATTAGCAACTAAATGTGTTAAGAGAAGAATGGTACTGTCAATTATCAGTAACCATGAACTTCTTTGTGGCTTGCAAATTTTAAAGGGGGTTTGGGGTCTCCTCATCCAAGCCCAAACTGAGTATATGACTAAGATGACTATTCCATTATTCATCCCTCGAGTATCACTTCCTTTTTCCATTCTCTCCTTTTTTTTTCCCTTTTTTTCCCTTTTTTCTTTTGAAAAATTGAGTATCAGATTCTGAGAGGCTACTTGTTAAGAAGTCAATTTTAGCATGTATGTTTCTTTCTAAATTCTGTTACTGTTTTGCGTTACTCTTGAGAGATTGAGTTTGAATATTTCAAATTGCAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTTTTGCAGGTAATAGTCCTAATGACTTTCCCTTATGCCATCCAAACTTCATTTAGTACCATACTCAACCTTCGCTTAGTTTAAGCATCATATACTTGAATTATATTAGTTTAGGCATTATTCCTTCAATCTAATTGGACCAAGAGAGTATTATATTAAAGAGGACAAAAATGTTATTGTGCATATTTAAGGAATGAAGAAATAATTAAGATACGTGGTCATGTTCTCGGAGTTTCTTTGGTAGCTACTGGTTGTTATGATGCTTAATAATGTGTGAGGTGCTGATACAAAGAAGTTCTTAATGCTTAGTTGACTGTGCTTATGTTGCCTCCCTCTCTCACACACTTCCTTTGAAGTACCGTAGGATAAAAATTGTTCTCTCAGTTGGCTGATCATCCTTGATTGTTCTTTAACCTGGTATCTGGCTTTAGATTAAAGAGTTTACTATATAGTAACTTACTTGCTAGATTATAATTTAAATTCTCTATTCAGATATTCTATCTATCATGTGTTAGAGAACATCACTTTTTTTTTTTTCTTTCACTTGGATGTTGATTATTCCAAGGACTTGGTTTACATTCTTGTAAAGTGGGGGGTTATTGATCTGGATCGGAAGCACGAACACATAGCATTCTGGCTAATACACTTACTGTGCATTTAGATTAACTTTCTAAGTAATTTTAGAAGGCAAAAAAGTGTAATATATATTTAAAAATTAATGTAAAGTGTTTGAATTTGATTATCGAAAAGTGATTATAAGTAATTGATCGGGAATTACTTTATTGTTTTTTGACATTTGTAGAATCACTTCTAGATATAGTGCAAGAAAACAAACTTGATTATAATCACTTTTAAGAAAATGTAACCAAACACCCAAAGATTTTAATTAAATTTCTTATGAGTGTTCTAAGAAAGATTTCTTTTAAATACATTTATACCACACTCAATCATTAAAATGTTTAAATACCTTCTGGAATATCATTGCTAATGCTAGTAGTCAAGAAGCACATATACTTTAGTTTGGCTAGCATGTGTGTTCGACACATATTAGACACTTGGACACTTATTAAACACTTGTTAGCACAATAGATATATATTAGACTTTAGTTGTACAAATTTAGCATAGGTCCAACATTTTTTTAAGATACATATCGAACACTTTTAAGTACCCTAAATAGACACACGACAGTATAGTACAAAAATAATAAATTTTGAGAGTAAAATACATCAAACTTTTTTAAGCATATAAATGCATAATTTATTGCCTTGGGATTTCCTTATGGTATAAAAATGATATATATTTTAATAAACGTGTCCTAGAGGACGTGTCCTTGTTCTAGTTTTTAAAAAATGACGTGTCACCGTATCTGTCATATATGTATCTGTATCCGTGCTTATTAGGCTAGGAGTGAGTGGTTTTTAGAAGGAAAAAAAAAAAAACATTACTTCCAAGAAAGAATTCTTATTTTCGTTTGATGACTGTATCATCTACAATTTAGGCAACTGTTAATCGATCGAAGGGAAACCGTACTGAACTTTCAAGAGCAGAACTAATTCAGAAAAGCTCTTACTGCCGAGTTTCAGGTGCACTAGTTTTATTTAACTGCAATGGATTATGATTTTACACCTTGGTAATGATATCATATGGCCAATTGGTTTAAATCACTTACAGGTCGAGACATGGACCTTCTTGAACTGTCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGGTGCAGAATTCAGTGACTCATCGAGTTATTATATTATTATCTTTAGTAGAATTGATTCCAGTCTGATACTTGGAAACTTAATAACAAAAGATTGAAATGAAAAAAGTAGGGAATTTTTGTTATGTTCTTATTTCATTCCTTTATGCGTATCGGGTATGAACGAATTGCGTATGCAAACGAGCTCGTTGATTTCATAGTAACATGTTTGATGTGTGTAGATCCTATGATTGAAGGGTTAAGAAGGGCATCATATGGGAAAAGAAAGAAGTGAAAGAAAAGGCAGAGTATGTGCAAGCTGTGAATTCATTTGTAAAGTTAAAATTCTTAGCAATCCCACTGTGAGGCAGGAAATACATTGGGTGTTCCTTTCCTCTCATTCTTTGCGTAATGGGGAAGTGATGCTTCACACCCCATACCCACCCTTCTTCTTGTGGTTCAATCAAAATGATAGGAACAGTAAGAAACCAGCTCATTAAGTAACTTTGACCTTTTGGAATCATTTTTTCATTTTTTTTTTATCTTATTTTTATCGATATTTCTAATTGGATAAATTCTA

mRNA sequence

TGGACGACACGTCGTTTAACAAGTGAAACGAAACAAGGGCCACTTCTCACTATTACCGCTCAAATTATCCGCCAACGACCGAATGATGAGATGAGGTCGAGCAAAGAATCGAAGAAGAAAACTCGCCCCTCATCACCGCTCAGGGACCGAACCAGTCCTTCAACGAGGTTCGAATCGAGGCGTCATGGGTCTCACTCATCGAGGCTCAGCCCCTCTACTTCCCTTCTGGACCGTGACCTTGTCACCAGCGAAGCCAATCTCCTCGGAGACCTAAAACTCTCTCCCGATCACTCAGTTTCAGACTACAATCCCCGGAGCTTTCCTTACAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGGGACCCAGATCGGTGGCGCCGAGATGCTCTTGGTAACACTGTTTTCCGAAAGCTTGTTGGCTGCCCCGGTTGTCTTTGTCATGACTATGATCATATTTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTTTTGCAGGCAACTGTTAATCGATCGAAGGGAAACCGTACTGAACTTTCAAGAGCAGAACTAATTCAGAAAAGCTCTTACTGCCGAGTTTCAGGTCGAGACATGGACCTTCTTGAACTGTCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGGTGCAGAATTCAGTGACTCATCGAGTTATTATATTATTATCTTTAGTAGAATTGATTCCAGTCTGATACTTGGAAACTTAATAACAAAAGATTGAAATGAAAAAAGTAGGGAATTTTTGTTATGTTCTTATTTCATTCCTTTATGCGTATCGGGTATGAACGAATTGCGTATGCAAACGAGCTCGTTGATTTCATAGTAACATGTTTGATGTGTGTAGATCCTATGATTGAAGGGTTAAGAAGGGCATCATATGGGAAAAGAAAGAAGTGAAAGAAAAGGCAGAGTATGTGCAAGCTGTGAATTCATTTGTAAAGTTAAAATTCTTAGCAATCCCACTGTGAGGCAGGAAATACATTGGGTGTTCCTTTCCTCTCATTCTTTGCGTAATGGGGAAGTGATGCTTCACACCCCATACCCACCCTTCTTCTTGTGGTTCAATCAAAATGATAGGAACAGTAAGAAACCAGCTCATTAAGTAACTTTGACCTTTTGGAATCATTTTTTCATTTTTTTTTTATCTTATTTTTATCGATATTTCTAATTGGATAAATTCTA

Coding sequence (CDS)

ATGAGGTCGAGCAAAGAATCGAAGAAGAAAACTCGCCCCTCATCACCGCTCAGGGACCGAACCAGTCCTTCAACGAGGTTCGAATCGAGGCGTCATGGGTCTCACTCATCGAGGCTCAGCCCCTCTACTTCCCTTCTGGACCGTGACCTTGTCACCAGCGAAGCCAATCTCCTCGGAGACCTAAAACTCTCTCCCGATCACTCAGTTTCAGACTACAATCCCCGGAGCTTTCCTTACAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGGGACCCAGATCGGTGGCGCCGAGATGCTCTTGGTAACACTGTTTTCCGAAAGCTTGTTGGCTGCCCCGGTTGTCTTTGTCATGACTATGATCATATTTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTTTTGCAGGCAACTGTTAATCGATCGAAGGGAAACCGTACTGAACTTTCAAGAGCAGAACTAATTCAGAAAAGCTCTTACTGCCGAGTTTCAGGTCGAGACATGGACCTTCTTGAACTGTCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGGTGCAGAATTCAGTGA

Protein sequence

MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGDLKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

Homology

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BLAST of Cp4.1LG04g14880 vs. NCBI nr
Match: XP_023529236.1 (uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 405 bits (1042), Expect = 9.47e-143
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60
           MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Cp4.1LG04g14880 vs. NCBI nr
Match: KAG6587544.1 (hypothetical protein SDJN03_16109, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021519.1 hypothetical protein SDJN02_15244 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403 bits (1036), Expect = 7.79e-142
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60
           MRSSKESKKKTRPSSPLRDRTSPS RFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSKRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Cp4.1LG04g14880 vs. NCBI nr
Match: XP_022972967.1 (uncharacterized protein LOC111471489 [Cucurbita maxima])

HSP 1 Score: 399 bits (1026), Expect = 2.61e-140
Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60
           MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGS+SSRLSPSTSLLDRDLVTSEANLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSNSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKLSPD SVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Cp4.1LG04g14880 vs. NCBI nr
Match: XP_022933556.1 (uncharacterized protein LOC111440950 [Cucurbita moschata])

HSP 1 Score: 398 bits (1022), Expect = 1.06e-139
Identity = 197/200 (98.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60
           MRSSKESKKKTRPSSPLRDRTSPS RFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSKRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKLSPD SVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQD GGCRIQ
Sbjct: 181 ELSAYGNVHRGQDPGGCRIQ 200

[Close]

BLAST of Cp4.1LG04g14880 vs. NCBI nr
Match: XP_008453210.1 (PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH endonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 367 bits (943), Expect = 1.18e-127
Identity = 181/200 (90.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60
           MR SKESKKKTRPSSPLRDRT   T  ES R+GSH S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+ SVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Cp4.1LG04g14880 vs. ExPASy TrEMBL
Match: A0A6J1I688 (uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489 PE=4 SV=1)

HSP 1 Score: 399 bits (1026), Expect = 1.26e-140
Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60
           MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGS+SSRLSPSTSLLDRDLVTSEANLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSNSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKLSPD SVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Cp4.1LG04g14880 vs. ExPASy TrEMBL
Match: A0A6J1EZE0 (uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC111440950 PE=4 SV=1)

HSP 1 Score: 398 bits (1022), Expect = 5.15e-140
Identity = 197/200 (98.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60
           MRSSKESKKKTRPSSPLRDRTSPS RFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSKRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKLSPD SVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQD GGCRIQ
Sbjct: 181 ELSAYGNVHRGQDPGGCRIQ 200

[Close]

BLAST of Cp4.1LG04g14880 vs. ExPASy TrEMBL
Match: A0A5A7US43 (HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002510 PE=4 SV=1)

HSP 1 Score: 367 bits (943), Expect = 5.71e-128
Identity = 181/200 (90.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60
           MR SKESKKKTRPSSPLRDRT   T  ES R+GSH S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+ SVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Cp4.1LG04g14880 vs. ExPASy TrEMBL
Match: A0A1S3BWU4 (uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=4 SV=1)

HSP 1 Score: 367 bits (943), Expect = 5.71e-128
Identity = 181/200 (90.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60
           MR SKESKKKTRPSSPLRDRT   T  ES R+GSH S LSPS SLLDRDLVT E+NLLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SP+ SVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Cp4.1LG04g14880 vs. ExPASy TrEMBL
Match: A0A0A0LUI5 (HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV=1)

HSP 1 Score: 367 bits (942), Expect = 8.11e-128
Identity = 181/200 (90.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60
           MR SKESKKKTRPSSPLRDRT   T  ESR +GSH S LSPS SLLDRDLVT E++LLGD
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60

Query: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SPD SVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

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BLAST of Cp4.1LG04g14880 vs. TAIR 10
Match: AT3G47490.1 (HNH endonuclease )

HSP 1 Score: 245.0 bits (624), Expect = 5.2e-65
Identity = 124/190 (65.26%), Postives = 145/190 (76.32%), Query Frame = 0


Query: 14  SSPLRDRTSPSTRFESRRHG-SHSSRLSPSTSLLDRDLVTSEANLLGDLKLSPDHSVSDY 73
           SSP + R   S+   +R  G +   ++  S +LLDR+          ++ L P     D 
Sbjct: 55  SSPSKTRPELSSGSPNRNTGEARGGKVKTSATLLDRE----------EMGLFPGSGYGDP 114

Query: 74  N--PRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPY 133
           N  PRSFPYSVKQQCW+KAEKIKGRDP+RWRRD LGN VFRKLVGCPGCLCHDYDHI+PY
Sbjct: 115 NPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDYDHIVPY 174

Query: 134 SKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLLELSAYGNVHR 193
           SKGGKSTLENCQVLQA VNRSKGN+T++SR+ELIQ+SSYCRV+GRDMDL+EL+AYGNV R
Sbjct: 175 SKGGKSTLENCQVLQAKVNRSKGNKTDISRSELIQRSSYCRVAGRDMDLIELTAYGNVQR 234

Query: 194 GQDSGGCRIQ 201
              S GCRIQ
Sbjct: 235 APTSSGCRIQ 234

[Close]

BLAST of Cp4.1LG04g14880 vs. TAIR 10
Match: AT3G47490.3 (HNH endonuclease )

HSP 1 Score: 233.0 bits (593), Expect = 2.1e-61
Identity = 124/210 (59.05%), Postives = 145/210 (69.05%), Query Frame = 0


Query: 14  SSPLRDRTSPSTRFESRRHG-SHSSRLSPSTSLLDRDLVTSEANLLGDLKLSPDHSVSDY 73
           SSP + R   S+   +R  G +   ++  S +LLDR+          ++ L P     D 
Sbjct: 16  SSPSKTRPELSSGSPNRNTGEARGGKVKTSATLLDRE----------EMGLFPGSGYGDP 75

Query: 74  N--PRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPY 133
           N  PRSFPYSVKQQCW+KAEKIKGRDP+RWRRD LGN VFRKLVGCPGCLCHDYDHI+PY
Sbjct: 76  NPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDYDHIVPY 135

Query: 134 S--------------------KGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYC 193
           S                    KGGKSTLENCQVLQA VNRSKGN+T++SR+ELIQ+SSYC
Sbjct: 136 SKDMCPLEHAFDEPHKDFLDLKGGKSTLENCQVLQAKVNRSKGNKTDISRSELIQRSSYC 195

Query: 194 RVSGRDMDLLELSAYGNVHRGQDSGGCRIQ 201
           RV+GRDMDL+EL+AYGNV R   S GCRIQ
Sbjct: 196 RVAGRDMDLIELTAYGNVQRAPTSSGCRIQ 215

[Close]

BLAST of Cp4.1LG04g14880 vs. TAIR 10
Match: AT3G47490.2 (HNH endonuclease )

HSP 1 Score: 134.4 bits (337), Expect = 9.9e-32
Identity = 70/122 (57.38%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 14  SSPLRDRTSPSTRFESRRHG-SHSSRLSPSTSLLDRDLVTSEANLLGDLKLSPDHSVSDY 73
           SSP + R   S+   +R  G +   ++  S +LLDR+          ++ L P     D 
Sbjct: 55  SSPSKTRPELSSGSPNRNTGEARGGKVKTSATLLDRE----------EMGLFPGSGYGDP 114

Query: 74  N--PRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPY 133
           N  PRSFPYSVKQQCW+KAEKIKGRDP+RWRRD LGN VFRKLVGCPGCLCHDYDHI+PY
Sbjct: 115 NPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDYDHIVPY 166

[Close]

BLAST of Cp4.1LG04g14880 vs. TAIR 10
Match: AT1G18680.1 (HNH endonuclease domain-containing protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-27
Identity = 53/131 (40.46%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 68  SVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHI 127
           S  +  PR F    K +CW  A+ + GR P+RWR+D  GN V ++   C GCLC +YDHI
Sbjct: 34  SNGEERPRFFDGKAKNKCWANADIVPGRHPERWRKDVAGNIVCKRFGNCNGCLCFEYDHI 93

Query: 128 LPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLLELSAYGN 187
           +PYSKGG+S  ENCQ+LQ  VNR K  +  +    L   S   + + +++D++E++ YG+
Sbjct: 94  VPYSKGGESIAENCQILQTRVNRFKSAQENVDATTLKSYSCGLQFTDKELDVIEMAVYGD 153

Query: 188 VHRGQDSGGCR 199
           V R      C+
Sbjct: 154 VLRPGKECRCK 164

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g14880 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g14880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529236.1	9.47e-143	100.00	uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo]	[more]
KAG6587544.1	7.79e-142	99.50	hypothetical protein SDJN03_16109, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022972967.1	2.61e-140	99.00	uncharacterized protein LOC111471489 [Cucurbita maxima]	[more]
XP_022933556.1	1.06e-139	98.50	uncharacterized protein LOC111440950 [Cucurbita moschata]	[more]
XP_008453210.1	1.18e-127	90.50	PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH...	[more]

BLAST of Cp4.1LG04g14880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I688	1.26e-140	99.00	uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489...	[more]
A0A6J1EZE0	5.15e-140	98.50	uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC1114409...	[more]
A0A5A7US43	5.71e-128	90.50	HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002...	[more]
A0A1S3BWU4	5.71e-128	90.50	uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=...	[more]
A0A0A0LUI5	8.11e-128	90.50	HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV...	[more]

BLAST of Cp4.1LG04g14880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47490.1	5.2e-65	65.26	HNH endonuclease	[more]
AT3G47490.3	2.1e-61	59.05	HNH endonuclease	[more]
AT3G47490.2	9.9e-32	57.38	HNH endonuclease	[more]
AT1G18680.1	2.5e-27	40.46	HNH endonuclease domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002711	HNH endonuclease	PFAM	PF01844	HNH	coord: 122..155 e-value: 1.5E-4 score: 21.9
None	No IPR available	GENE3D	1.10.30.50		coord: 81..175 e-value: 5.7E-8 score: 34.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	PANTHER	PTHR33427	HNH ENDONUCLEASE	coord: 5..200
None	No IPR available	PANTHER	PTHR33427:SF3	HNH ENDONUCLEASE	coord: 5..200
IPR003615	HNH nuclease	CDD	cd00085	HNHc	coord: 109..153 e-value: 1.69529E-5 score: 38.992

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g14880.1	Cp4.1LG04g14880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding